Overview
Sequences
The following sequences are available for this feature:
Legend: five_prime_UTRexonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.TAAGTAAAAATAAAAATCCAAAATCTTGAAAAGATAACCCCCAATATTCTATGAGATTCTACTAGTACAAATACCACTCATAGTTGTACATCTTCTTTTATCCCAAAAACAAAACCAAAGTGATAAAAAAAAAACCTTGATCAATGGAGATAATCTCAAAAATCTTATTTCTCTTCTTTTTCCTCCTCCCAATTCTAGCTGCCTCCTCGGAAAATCAGGTATGCAATTAGTGTGCTTAATACGAATACGAATACGAATACGAATACGAATGAAGTAGTATGTTAATTACAATTTACAAATTTATGGTAACGTTATAATTATGTATTGTTTGTGTATGATAAGATGTTATATATATATATATAATGGCAGGTTTATATAGTATACTTGGGAGGGCATAAGGGAGATAAAGAAGTACATGAGATAGAACAATTTCATCACTCTTACTTAGCCTCTGTTAAGGAAACAGAGCAAGAGGCTAGAGCATCTATGCTTTACAGTTACAAACATAGTATTAATGGCTTTGCTGCTACTCTTACTCCCGATCAAGCCTCTAAACTATCTGGTATTCCATTCGTCTTCCCTTCAATTCTTCCGCTTTTCTTTACTCCTTTTTTACTTGAGATTTAAAACATTTCCTCTTTATTAACAGTCACAGTCACAGTCACGTTGATTGTGTAATTTGAATCGGTAACATGTCACTTAAATCTAAAAATCAATGTTTATGCTAATGGCTTTTAATGATTTATACCATTGTTACATTGAATTTTACTGATATCAAATTATACCATGTTGATATTTGACTATGGCAAAAGGTTAAAGGTTTGTTAAAATTTTGCCCTAAGCCTAAAGAGTAAAGACCAAGTGCCCCCGAGCCAAATCTACTTTTATATTTAATTTAATTTAATTTAATTTAATTTAATTTAATGAAATGAATTTGTATTGTAATTTGAATAGAATTGGAGGAAGTGATATCGGTGTTTCGAAGCCATCCAATGAAGCACGAAATGCATACAACAAGGTCATGGGAATTCGTAGGGTTGGAGGAAGGAATCAAAACAACACAGATGCACTCTCATACAGCGGGGATGACTCAAGGTTTACTGTCAAAAGCAAAGTATGGACACAATGTCATCGTCGGGGTCTTAGATAGT TAAGTAAAAATAAAAATCCAAAATCTTGAAAAGATAACCCCCAATATTCTATGAGATTCTACTAGTACAAATACCACTCATAGTTGTACATCTTCTTTTATCCCAAAAACAAAACCAAAGTGATAAAAAAAAAACCTTGATCAATGGAGATAATCTCAAAAATCTTATTTCTCTTCTTTTTCCTCCTCCCAATTCTAGCTGCCTCCTCGGAAAATCAGGTTTATATAGTATACTTGGGAGGGCATAAGGGAGATAAAGAAGTACATGAGATAGAACAATTTCATCACTCTTACTTAGCCTCTGTTAAGGAAACAGAGCAAGAGGCTAGAGCATCTATGCTTTACAGTTACAAACATAGTATTAATGGCTTTGCTGCTACTCTTACTCCCGATCAAGCCTCTAAACTATCTGAATTGGAGGAAGTGATATCGGTGTTTCGAAGCCATCCAATGAAGCACGAAATGCATACAACAAGGTCATGGGAATTCGTAGGGTTGGAGGAAGGAATCAAAACAACACAGATGCACTCTCATACAGCGGGGATGACTCAAGGTTTACTGTCAAAAGCAAAGTATGGACACAATGTCATCGTCGGGGTCTTAGATAGT ATGGAGATAATCTCAAAAATCTTATTTCTCTTCTTTTTCCTCCTCCCAATTCTAGCTGCCTCCTCGGAAAATCAGGTTTATATAGTATACTTGGGAGGGCATAAGGGAGATAAAGAAGTACATGAGATAGAACAATTTCATCACTCTTACTTAGCCTCTGTTAAGGAAACAGAGCAAGAGGCTAGAGCATCTATGCTTTACAGTTACAAACATAGTATTAATGGCTTTGCTGCTACTCTTACTCCCGATCAAGCCTCTAAACTATCTGAATTGGAGGAAGTGATATCGGTGTTTCGAAGCCATCCAATGAAGCACGAAATGCATACAACAAGGTCATGGGAATTCGTAGGGTTGGAGGAAGGAATCAAAACAACACAGATGCACTCTCATACAGCGGGGATGACTCAAGGTTTACTGTCAAAAGCAAAGTATGGACACAATGTCATCGTCGGGGTCTTAGATAGT MEIISKILFLFFFLLPILAASSENQVYIVYLGGHKGDKEVHEIEQFHHSYLASVKETEQEARASMLYSYKHSINGFAATLTPDQASKLSELEEVISVFRSHPMKHEMHTTRSWEFVGLEEGIKTTQMHSHTAGMTQGLLSKAKYGHNVIVGVLDS Relationships
The following mRNA feature(s) are a part of this gene:
Homology
BLAST of Spo07563.1 vs. NCBI nr
Match: gi|902181395|gb|KNA09728.1| (hypothetical protein SOVF_150930 [Spinacia oleracea]) HSP 1 Score: 304.7 bits (779), Expect = 9.400e-80 Identity = 155/155 (100.00%), Postives = 155/155 (100.00%), Query Frame = 1
BLAST of Spo07563.1 vs. NCBI nr
Match: gi|731370210|ref|XP_010665649.1| (PREDICTED: subtilisin-like protease SBT5.3 [Beta vulgaris subsp. vulgaris]) HSP 1 Score: 231.5 bits (589), Expect = 1.000e-57 Identity = 119/155 (76.77%), Postives = 136/155 (87.74%), Query Frame = 1
BLAST of Spo07563.1 vs. NCBI nr
Match: gi|743932273|ref|XP_011010424.1| (PREDICTED: subtilisin-like protease SBT5.3 [Populus euphratica]) HSP 1 Score: 184.5 bits (467), Expect = 1.400e-43 Identity = 95/154 (61.69%), Postives = 118/154 (76.62%), Query Frame = 1
BLAST of Spo07563.1 vs. NCBI nr
Match: gi|970010684|ref|XP_015066240.1| (PREDICTED: subtilisin-like protease SBT5.3 [Solanum pennellii]) HSP 1 Score: 183.3 bits (464), Expect = 3.100e-43 Identity = 91/155 (58.71%), Postives = 116/155 (74.84%), Query Frame = 1
BLAST of Spo07563.1 vs. NCBI nr
Match: gi|743903976|ref|XP_011045349.1| (PREDICTED: subtilisin-like protease SBT5.3 isoform X2 [Populus euphratica]) HSP 1 Score: 183.0 bits (463), Expect = 4.100e-43 Identity = 94/154 (61.04%), Postives = 118/154 (76.62%), Query Frame = 1
BLAST of Spo07563.1 vs. UniProtKB/TrEMBL
Match: A0A0K9QSR9_SPIOL (Uncharacterized protein OS=Spinacia oleracea GN=SOVF_150930 PE=4 SV=1) HSP 1 Score: 304.7 bits (779), Expect = 6.500e-80 Identity = 155/155 (100.00%), Postives = 155/155 (100.00%), Query Frame = 1
BLAST of Spo07563.1 vs. UniProtKB/TrEMBL
Match: A0A0J8B6Q9_BETVU (Uncharacterized protein OS=Beta vulgaris subsp. vulgaris GN=BVRB_8g200960 PE=4 SV=1) HSP 1 Score: 231.5 bits (589), Expect = 7.000e-58 Identity = 119/155 (76.77%), Postives = 136/155 (87.74%), Query Frame = 1
BLAST of Spo07563.1 vs. UniProtKB/TrEMBL
Match: K4B8D4_SOLLC (Uncharacterized protein OS=Solanum lycopersicum PE=4 SV=1) HSP 1 Score: 181.0 bits (458), Expect = 1.100e-42 Identity = 90/155 (58.06%), Postives = 115/155 (74.19%), Query Frame = 1
BLAST of Spo07563.1 vs. UniProtKB/TrEMBL
Match: F6HME6_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_10s0003g02170 PE=4 SV=1) HSP 1 Score: 180.6 bits (457), Expect = 1.400e-42 Identity = 88/148 (59.46%), Postives = 114/148 (77.03%), Query Frame = 1
BLAST of Spo07563.1 vs. UniProtKB/TrEMBL
Match: B9I132_POPTR (Subtilase family protein OS=Populus trichocarpa GN=POPTR_0011s03070g PE=4 SV=1) HSP 1 Score: 180.6 bits (457), Expect = 1.400e-42 Identity = 94/152 (61.84%), Postives = 114/152 (75.00%), Query Frame = 1
BLAST of Spo07563.1 vs. ExPASy Swiss-Prot
Match: SBT56_ARATH (Subtilisin-like protease SBT5.6 OS=Arabidopsis thaliana GN=SBT5.6 PE=2 SV=1) HSP 1 Score: 180.6 bits (457), Expect = 1.300e-44 Identity = 96/155 (61.94%), Postives = 115/155 (74.19%), Query Frame = 1
BLAST of Spo07563.1 vs. ExPASy Swiss-Prot
Match: SBT55_ARATH (Subtilisin-like protease SBT5.5 OS=Arabidopsis thaliana GN=SBT5.5 PE=3 SV=2) HSP 1 Score: 155.6 bits (392), Expect = 4.400e-37 Identity = 87/160 (54.37%), Postives = 109/160 (68.12%), Query Frame = 1
BLAST of Spo07563.1 vs. ExPASy Swiss-Prot
Match: SBT39_ARATH (Subtilisin-like protease SBT3.9 OS=Arabidopsis thaliana GN=SBT3.9 PE=3 SV=1) HSP 1 Score: 91.7 bits (226), Expect = 7.800e-18 Identity = 59/154 (38.31%), Postives = 89/154 (57.79%), Query Frame = 1
BLAST of Spo07563.1 vs. ExPASy Swiss-Prot
Match: SBT3A_ARATH (Subtilisin-like protease SBT3.10 OS=Arabidopsis thaliana GN=SBT3.10 PE=3 SV=2) HSP 1 Score: 89.7 bits (221), Expect = 3.000e-17 Identity = 57/154 (37.01%), Postives = 89/154 (57.79%), Query Frame = 1
BLAST of Spo07563.1 vs. ExPASy Swiss-Prot
Match: SBT3F_ARATH (Subtilisin-like protease SBT3.15 OS=Arabidopsis thaliana GN=SBT3.15 PE=2 SV=2) HSP 1 Score: 89.4 bits (220), Expect = 3.900e-17 Identity = 60/155 (38.71%), Postives = 88/155 (56.77%), Query Frame = 1
BLAST of Spo07563.1 vs. TAIR (Arabidopsis)
Match: AT5G45650.1 (subtilase family protein) HSP 1 Score: 180.6 bits (457), Expect = 7.200e-46 Identity = 96/155 (61.94%), Postives = 115/155 (74.19%), Query Frame = 1
BLAST of Spo07563.1 vs. TAIR (Arabidopsis)
Match: AT4G10520.1 (Subtilase family protein) HSP 1 Score: 91.7 bits (226), Expect = 4.400e-19 Identity = 59/154 (38.31%), Postives = 89/154 (57.79%), Query Frame = 1
BLAST of Spo07563.1 vs. TAIR (Arabidopsis)
Match: AT4G10530.1 (Subtilase family protein) HSP 1 Score: 89.7 bits (221), Expect = 1.700e-18 Identity = 57/154 (37.01%), Postives = 89/154 (57.79%), Query Frame = 1
BLAST of Spo07563.1 vs. TAIR (Arabidopsis)
Match: AT4G21640.1 (Subtilase family protein) HSP 1 Score: 89.4 bits (220), Expect = 2.200e-18 Identity = 60/155 (38.71%), Postives = 88/155 (56.77%), Query Frame = 1
BLAST of Spo07563.1 vs. TAIR (Arabidopsis)
Match: AT5G45640.1 (Subtilisin-like serine endopeptidase family protein) HSP 1 Score: 88.2 bits (217), Expect = 4.900e-18 Identity = 56/118 (47.46%), Postives = 72/118 (61.02%), Query Frame = 1
The following BLAST results are available for this feature:
BLAST of Spo07563.1 vs. NCBI nr
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. NCBI nr) Total hits: 5
BLAST of Spo07563.1 vs. UniProtKB/TrEMBL
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. UniprotKB/TrEMBL) Total hits: 5
BLAST of Spo07563.1 vs. ExPASy Swiss-Prot
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. ExPASy SwissProt) Total hits: 5
BLAST of Spo07563.1 vs. TAIR (Arabidopsis)
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. TAIR) Total hits: 5
InterPro
Analysis Name: InterPro Annotations of S. oleracea
Date Performed: 2018-06-29
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
RNA-Seq Expression
Co-expression
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