Spo21430.1 (mRNA) | SpinachBase

Overview


Name	Spo21430.1
Type	mRNA
Organism	Spinacia oleracea (Spinach)
Description	Plastocyanin A
Location	SpoScf_01077 : 34316 .. 34822 (-)
Sequence length	507

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDSexon

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCCACCGTCGCTTCCTCCGCTGCCGTAGCCGTCCCCTCCTTTACCGGCCTTAAGGCCTCAGGATCCATCAAGCCTACCACCGCAAAAATCATCCCAACCACCACCGCCGTCCCAAGATTGTCTGTCAAGGCTTCCTTGAAGAATGTCGGAGCCGCCGTGGTAGCAACCGCAGCCGCCGGACTTCTAGCCGGAAACGCCATGGCCGTTGAGGTGTTGCTCGGAGGGGGTGACGGATCATTGGCATTCCTTCCAGGAGACTTCAGCGTAGCCTCGGGCGAGGAGATCGTATTCAAGAACAATGCCGGATTCCCCCACAACGTAGTGTTTGACGAGGACGAGATTCCCTCCGGTGTCGACGCCGCGAAGATTTCGATGTCCGAGGAGGATTTGCTGAATGCACCAGGGGAAACTTACAAAGTTACCCTTACTGAGAAAGGAACTTACAAGTTCTACTGCTCACCCCACCAGGGTGCTGGTATGGTGGGAAAAGTAACTGTCAACTAA

mRNA sequence

ATGGCCACCGTCGCTTCCTCCGCTGCCGTAGCCGTCCCCTCCTTTACCGGCCTTAAGGCCTCAGGATCCATCAAGCCTACCACCGCAAAAATCATCCCAACCACCACCGCCGTCCCAAGATTGTCTGTCAAGGCTTCCTTGAAGAATGTCGGAGCCGCCGTGGTAGCAACCGCAGCCGCCGGACTTCTAGCCGGAAACGCCATGGCCGTTGAGGTGTTGCTCGGAGGGGGTGACGGATCATTGGCATTCCTTCCAGGAGACTTCAGCGTAGCCTCGGGCGAGGAGATCGTATTCAAGAACAATGCCGGATTCCCCCACAACGTAGTGTTTGACGAGGACGAGATTCCCTCCGGTGTCGACGCCGCGAAGATTTCGATGTCCGAGGAGGATTTGCTGAATGCACCAGGGGAAACTTACAAAGTTACCCTTACTGAGAAAGGAACTTACAAGTTCTACTGCTCACCCCACCAGGGTGCTGGTATGGTGGGAAAAGTAACTGTCAACTAA

Coding sequence (CDS)

ATGGCCACCGTCGCTTCCTCCGCTGCCGTAGCCGTCCCCTCCTTTACCGGCCTTAAGGCCTCAGGATCCATCAAGCCTACCACCGCAAAAATCATCCCAACCACCACCGCCGTCCCAAGATTGTCTGTCAAGGCTTCCTTGAAGAATGTCGGAGCCGCCGTGGTAGCAACCGCAGCCGCCGGACTTCTAGCCGGAAACGCCATGGCCGTTGAGGTGTTGCTCGGAGGGGGTGACGGATCATTGGCATTCCTTCCAGGAGACTTCAGCGTAGCCTCGGGCGAGGAGATCGTATTCAAGAACAATGCCGGATTCCCCCACAACGTAGTGTTTGACGAGGACGAGATTCCCTCCGGTGTCGACGCCGCGAAGATTTCGATGTCCGAGGAGGATTTGCTGAATGCACCAGGGGAAACTTACAAAGTTACCCTTACTGAGAAAGGAACTTACAAGTTCTACTGCTCACCCCACCAGGGTGCTGGTATGGTGGGAAAAGTAACTGTCAACTAA

Protein sequence

MATVASSAAVAVPSFTGLKASGSIKPTTAKIIPTTTAVPRLSVKASLKNVGAAVVATAAAGLLAGNAMAVEVLLGGGDGSLAFLPGDFSVASGEEIVFKNNAGFPHNVVFDEDEIPSGVDAAKISMSEEDLLNAPGETYKVTLTEKGTYKFYCSPHQGAGMVGKVTVN

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
Spo21430	Spo21430	gene

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
Spo21430.1	Spo21430.1-protein	polypeptide

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Spo21430.1.CDS.1	Spo21430.1.CDS.1	CDS

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Spo21430.1.exon.1	Spo21430.1.exon.1	exon

Homology

[Close]

BLAST of Spo21430.1 vs. NCBI nr
Match: gi|130285|sp|P00289.2|PLAS_SPIOL (RecName: Full=Plastocyanin, chloroplastic; Flags: Precursor)

HSP 1 Score: 312.8 bits (800), Expect = 3.700e-82
Identity = 168/168 (100.00%), Postives = 168/168 (100.00%), Query Frame = 1

		  
Query: 1   MATVASSAAVAVPSFTGLKASGSIKPTTAKIIPTTTAVPRLSVKASLKNVGAAVVATAAA 60
           MATVASSAAVAVPSFTGLKASGSIKPTTAKIIPTTTAVPRLSVKASLKNVGAAVVATAAA
Sbjct: 1   MATVASSAAVAVPSFTGLKASGSIKPTTAKIIPTTTAVPRLSVKASLKNVGAAVVATAAA 60

Query: 61  GLLAGNAMAVEVLLGGGDGSLAFLPGDFSVASGEEIVFKNNAGFPHNVVFDEDEIPSGVD 120
           GLLAGNAMAVEVLLGGGDGSLAFLPGDFSVASGEEIVFKNNAGFPHNVVFDEDEIPSGVD
Sbjct: 61  GLLAGNAMAVEVLLGGGDGSLAFLPGDFSVASGEEIVFKNNAGFPHNVVFDEDEIPSGVD 120

Query: 121 AAKISMSEEDLLNAPGETYKVTLTEKGTYKFYCSPHQGAGMVGKVTVN 169
           AAKISMSEEDLLNAPGETYKVTLTEKGTYKFYCSPHQGAGMVGKVTVN
Sbjct: 121 AAKISMSEEDLLNAPGETYKVTLTEKGTYKFYCSPHQGAGMVGKVTVN 168

[Close]

BLAST of Spo21430.1 vs. NCBI nr
Match: gi|731373750|ref|XP_010666739.1| (PREDICTED: plastocyanin, chloroplastic [Beta vulgaris subsp. vulgaris])

HSP 1 Score: 271.6 bits (693), Expect = 9.500e-70
Identity = 143/168 (85.12%), Postives = 153/168 (91.07%), Query Frame = 1

		  
Query: 1   MATVASSAAVAVPSFTGLKASGSIKPTTAKIIPTTTAVPRLSVKASLKNVGAAVVATAAA 60
           MATV SSAAVAVPSFTGLKA+G  KPT AK+IPTTTAVPRLSVKASLKNVG AV ATAAA
Sbjct: 1   MATVTSSAAVAVPSFTGLKAAGPAKPTIAKMIPTTTAVPRLSVKASLKNVGVAVAATAAA 60

Query: 61  GLLAGNAMAVEVLLGGGDGSLAFLPGDFSVASGEEIVFKNNAGFPHNVVFDEDEIPSGVD 120
           G+LAGNAMA+E+LLGG  G LAF+P DF+VA+GEEIVFKNNAG+PHNVVFDEDEIPSGVD
Sbjct: 61  GILAGNAMAIEILLGGEGGVLAFVPQDFNVAAGEEIVFKNNAGYPHNVVFDEDEIPSGVD 120

Query: 121 AAKISMSEEDLLNAPGETYKVTLTEKGTYKFYCSPHQGAGMVGKVTVN 169
           A KISM EEDLLN PGETYKV LTEKG+YKFYCSPH GAGMVGKVTVN
Sbjct: 121 AGKISMPEEDLLNGPGETYKVVLTEKGSYKFYCSPHAGAGMVGKVTVN 168

[Close]

BLAST of Spo21430.1 vs. NCBI nr
Match: gi|802607282|ref|XP_012073717.1| (PREDICTED: plastocyanin [Jatropha curcas])

HSP 1 Score: 243.0 bits (619), Expect = 3.600e-61
Identity = 132/169 (78.11%), Postives = 145/169 (85.80%), Query Frame = 1

		  
Query: 1   MATVASSAAVAVPSFTGLKAS-GSIKPTTAKIIPTTTAVPRLSVKASLKNVGAAVVATAA 60
           MA V +SAAV +PSFTGLKA+ G+     A + P    VPRLSVKAS+K+VG AVVATAA
Sbjct: 1   MAAV-TSAAVGIPSFTGLKAANGTTAKVNASVKPAACPVPRLSVKASMKDVGVAVVATAA 60

Query: 61  AGLLAGNAMAVEVLLGGGDGSLAFLPGDFSVASGEEIVFKNNAGFPHNVVFDEDEIPSGV 120
           + +LA NAMAVEVLLGG DGSLAF+P DFSVA GE IVFKNNAGFPHNV+FDEDEIP GV
Sbjct: 61  SAILASNAMAVEVLLGGDDGSLAFVPSDFSVAPGETIVFKNNAGFPHNVIFDEDEIPGGV 120

Query: 121 DAAKISMSEEDLLNAPGETYKVTLTEKGTYKFYCSPHQGAGMVGKVTVN 169
           DA+KISMSEEDLLNAPGETYKVTLTEKG+Y FYCSPHQGAGMVGKVTVN
Sbjct: 121 DASKISMSEEDLLNAPGETYKVTLTEKGSYAFYCSPHQGAGMVGKVTVN 168

[Close]

BLAST of Spo21430.1 vs. NCBI nr
Match: gi|130282|sp|P07030.1|PLAS_SILLB (RecName: Full=Plastocyanin, chloroplastic; Flags: Precursor)

HSP 1 Score: 239.6 bits (610), Expect = 4.000e-60
Identity = 125/168 (74.40%), Postives = 139/168 (82.74%), Query Frame = 1

		  
Query: 1   MATVASSAAVAVPSFTGLKASGSIKPTTAKIIPTTTAVPRLSVKASLKNVGAAVVATAAA 60
           MATV SSAAVA+PSF GLKAS + +  T K+     A PR+S+KASLK+VG  V ATAAA
Sbjct: 1   MATVTSSAAVAIPSFAGLKASSTTRAATVKV---AVATPRMSIKASLKDVGVVVAATAAA 60

Query: 61  GLLAGNAMAVEVLLGGGDGSLAFLPGDFSVASGEEIVFKNNAGFPHNVVFDEDEIPSGVD 120
           G+LAGNAMA EVLLG  DG LAF+P D S+ASGE+I FKNNAGFPHNVVFDEDE+P+GVD
Sbjct: 61  GILAGNAMAAEVLLGSSDGGLAFVPSDLSIASGEKITFKNNAGFPHNVVFDEDEVPAGVD 120

Query: 121 AAKISMSEEDLLNAPGETYKVTLTEKGTYKFYCSPHQGAGMVGKVTVN 169
             KISM EEDLLNAPGE Y VTLTEKGTYKFYC+PH GAGMVGKVTVN
Sbjct: 121 VTKISMPEEDLLNAPGEEYSVTLTEKGTYKFYCAPHAGAGMVGKVTVN 165

[Close]

BLAST of Spo21430.1 vs. NCBI nr
Match: gi|1012203378|ref|XP_015973807.1| (PREDICTED: plastocyanin [Arachis duranensis])

HSP 1 Score: 239.6 bits (610), Expect = 4.000e-60
Identity = 128/170 (75.29%), Postives = 146/170 (85.88%), Query Frame = 1

		  
Query: 1   MATVASSAAVAVPSFTGLKASGSIKPT--TAKIIPTTTAVPRLSVKASLKNVGAAVVATA 60
           MAT+ +SAAV +PSFTGLKA+ +   T  +A +  +    PRL VKASLK+VG AVVATA
Sbjct: 1   MATITNSAAVTIPSFTGLKATATNATTKVSAGVKVSAAQFPRLGVKASLKDVGVAVVATA 60

Query: 61  AAGLLAGNAMAVEVLLGGGDGSLAFLPGDFSVASGEEIVFKNNAGFPHNVVFDEDEIPSG 120
           A+ +LA NAMA+EVLLGG DGSLAF+P DFS+A+GE+IVFKNNAGFPHNVVFDEDEIPSG
Sbjct: 61  ASAVLASNAMAIEVLLGGDDGSLAFIPKDFSIAAGEKIVFKNNAGFPHNVVFDEDEIPSG 120

Query: 121 VDAAKISMSEEDLLNAPGETYKVTLTEKGTYKFYCSPHQGAGMVGKVTVN 169
           VDA+KISMSEEDLLNAPGE Y VTL+EKGTY FYCSPHQGAGMVGKVTVN
Sbjct: 121 VDASKISMSEEDLLNAPGEVYNVTLSEKGTYSFYCSPHQGAGMVGKVTVN 170

[Close]

BLAST of Spo21430.1 vs. UniProtKB/TrEMBL
Match: A0A0K9QSA8_SPIOL (Plastocyanin OS=Spinacia oleracea GN=SOVF_153680 PE=3 SV=1)

HSP 1 Score: 312.8 bits (800), Expect = 2.600e-82
Identity = 168/168 (100.00%), Postives = 168/168 (100.00%), Query Frame = 1

		  
Query: 1   MATVASSAAVAVPSFTGLKASGSIKPTTAKIIPTTTAVPRLSVKASLKNVGAAVVATAAA 60
           MATVASSAAVAVPSFTGLKASGSIKPTTAKIIPTTTAVPRLSVKASLKNVGAAVVATAAA
Sbjct: 1   MATVASSAAVAVPSFTGLKASGSIKPTTAKIIPTTTAVPRLSVKASLKNVGAAVVATAAA 60

Query: 61  GLLAGNAMAVEVLLGGGDGSLAFLPGDFSVASGEEIVFKNNAGFPHNVVFDEDEIPSGVD 120
           GLLAGNAMAVEVLLGGGDGSLAFLPGDFSVASGEEIVFKNNAGFPHNVVFDEDEIPSGVD
Sbjct: 61  GLLAGNAMAVEVLLGGGDGSLAFLPGDFSVASGEEIVFKNNAGFPHNVVFDEDEIPSGVD 120

Query: 121 AAKISMSEEDLLNAPGETYKVTLTEKGTYKFYCSPHQGAGMVGKVTVN 169
           AAKISMSEEDLLNAPGETYKVTLTEKGTYKFYCSPHQGAGMVGKVTVN
Sbjct: 121 AAKISMSEEDLLNAPGETYKVTLTEKGTYKFYCSPHQGAGMVGKVTVN 168

[Close]

BLAST of Spo21430.1 vs. UniProtKB/TrEMBL
Match: A0A0J8B4F7_BETVU (Plastocyanin OS=Beta vulgaris subsp. vulgaris GN=BVRB_004160 PE=3 SV=1)

HSP 1 Score: 271.6 bits (693), Expect = 6.600e-70
Identity = 143/168 (85.12%), Postives = 153/168 (91.07%), Query Frame = 1

		  
Query: 1   MATVASSAAVAVPSFTGLKASGSIKPTTAKIIPTTTAVPRLSVKASLKNVGAAVVATAAA 60
           MATV SSAAVAVPSFTGLKA+G  KPT AK+IPTTTAVPRLSVKASLKNVG AV ATAAA
Sbjct: 1   MATVTSSAAVAVPSFTGLKAAGPAKPTIAKMIPTTTAVPRLSVKASLKNVGVAVAATAAA 60

Query: 61  GLLAGNAMAVEVLLGGGDGSLAFLPGDFSVASGEEIVFKNNAGFPHNVVFDEDEIPSGVD 120
           G+LAGNAMA+E+LLGG  G LAF+P DF+VA+GEEIVFKNNAG+PHNVVFDEDEIPSGVD
Sbjct: 61  GILAGNAMAIEILLGGEGGVLAFVPQDFNVAAGEEIVFKNNAGYPHNVVFDEDEIPSGVD 120

Query: 121 AAKISMSEEDLLNAPGETYKVTLTEKGTYKFYCSPHQGAGMVGKVTVN 169
           A KISM EEDLLN PGETYKV LTEKG+YKFYCSPH GAGMVGKVTVN
Sbjct: 121 AGKISMPEEDLLNGPGETYKVVLTEKGSYKFYCSPHAGAGMVGKVTVN 168

[Close]

BLAST of Spo21430.1 vs. UniProtKB/TrEMBL
Match: A0A067KPD8_JATCU (Plastocyanin OS=Jatropha curcas GN=JCGZ_08159 PE=3 SV=1)

HSP 1 Score: 243.0 bits (619), Expect = 2.500e-61
Identity = 132/169 (78.11%), Postives = 145/169 (85.80%), Query Frame = 1

		  
Query: 1   MATVASSAAVAVPSFTGLKAS-GSIKPTTAKIIPTTTAVPRLSVKASLKNVGAAVVATAA 60
           MA V +SAAV +PSFTGLKA+ G+     A + P    VPRLSVKAS+K+VG AVVATAA
Sbjct: 1   MAAV-TSAAVGIPSFTGLKAANGTTAKVNASVKPAACPVPRLSVKASMKDVGVAVVATAA 60

Query: 61  AGLLAGNAMAVEVLLGGGDGSLAFLPGDFSVASGEEIVFKNNAGFPHNVVFDEDEIPSGV 120
           + +LA NAMAVEVLLGG DGSLAF+P DFSVA GE IVFKNNAGFPHNV+FDEDEIP GV
Sbjct: 61  SAILASNAMAVEVLLGGDDGSLAFVPSDFSVAPGETIVFKNNAGFPHNVIFDEDEIPGGV 120

Query: 121 DAAKISMSEEDLLNAPGETYKVTLTEKGTYKFYCSPHQGAGMVGKVTVN 169
           DA+KISMSEEDLLNAPGETYKVTLTEKG+Y FYCSPHQGAGMVGKVTVN
Sbjct: 121 DASKISMSEEDLLNAPGETYKVTLTEKGSYAFYCSPHQGAGMVGKVTVN 168

[Close]

BLAST of Spo21430.1 vs. UniProtKB/TrEMBL
Match: C6SZV4_SOYBN (Plastocyanin OS=Glycine max PE=2 SV=1)

HSP 1 Score: 233.8 bits (595), Expect = 1.500e-58
Identity = 128/168 (76.19%), Postives = 142/168 (84.52%), Query Frame = 1

		  
Query: 1   MATVASSAAVAVPSFTGLKASGSIKPTTAKIIPTTTAVPRLSVKASLKNVGAAVVATAAA 60
           MATV +SAAVA+PSFTGLKAS  I     K+  +     RL +KASLK+VG AVVATAA+
Sbjct: 1   MATV-TSAAVAIPSFTGLKASAGIVSAAVKV--SAPQATRLGIKASLKDVGVAVVATAAS 60

Query: 61  GLLAGNAMAVEVLLGGGDGSLAFLPGDFSVASGEEIVFKNNAGFPHNVVFDEDEIPSGVD 120
            +LA NAMA+EVLLGG DGSLAF+P +FSVASGE+IVFKNNAGFPHNVVFDEDEIPSGVD
Sbjct: 61  AVLASNAMAIEVLLGGDDGSLAFVPNNFSVASGEKIVFKNNAGFPHNVVFDEDEIPSGVD 120

Query: 121 AAKISMSEEDLLNAPGETYKVTLTEKGTYKFYCSPHQGAGMVGKVTVN 169
           A KISMS+EDLLNAPGETY VTL  KGTY F+CSPHQGAGMVGKVTVN
Sbjct: 121 AGKISMSDEDLLNAPGETYSVTLDAKGTYSFFCSPHQGAGMVGKVTVN 165

[Close]

BLAST of Spo21430.1 vs. UniProtKB/TrEMBL
Match: U5TZM8_PHAVU (Plastocyanin OS=Phaseolus vulgaris GN=PHAVU_009G020300g PE=2 SV=1)

HSP 1 Score: 232.6 bits (592), Expect = 3.400e-58
Identity = 125/168 (74.40%), Postives = 141/168 (83.93%), Query Frame = 1

		  
Query: 1   MATVASSAAVAVPSFTGLKASGSIKPTTAKIIPTTTAVPRLSVKASLKNVGAAVVATAAA 60
           MA V +SAAVA+PSFTGLKASG  K + A +  +    PR  +KASLK++GAAVVATAA+
Sbjct: 1   MAAV-TSAAVAIPSFTGLKASGPTKVSAAAVKVSVPQAPRFGIKASLKDLGAAVVATAAS 60

Query: 61  GLLAGNAMAVEVLLGGGDGSLAFLPGDFSVASGEEIVFKNNAGFPHNVVFDEDEIPSGVD 120
            +LA NAMA+EVLLG GDGSL F+P +FSV SGE+IVFKNNAGFPHNVVFDEDEIP+GVD
Sbjct: 61  AVLASNAMALEVLLGSGDGSLVFVPSEFSVPSGEKIVFKNNAGFPHNVVFDEDEIPAGVD 120

Query: 121 AAKISMSEEDLLNAPGETYKVTLTEKGTYKFYCSPHQGAGMVGKVTVN 169
           A KISM EE+LLNAPGETY VTL  KGTY FYCSPHQGAGMVGKVTVN
Sbjct: 121 AVKISMPEEELLNAPGETYVVTLDTKGTYSFYCSPHQGAGMVGKVTVN 167

[Close]

BLAST of Spo21430.1 vs. ExPASy Swiss-Prot
Match: PLAS_SPIOL (Plastocyanin, chloroplastic OS=Spinacia oleracea GN=PETE PE=1 SV=2)

HSP 1 Score: 312.8 bits (800), Expect = 2.300e-84
Identity = 168/168 (100.00%), Postives = 168/168 (100.00%), Query Frame = 1

		  
Query: 1   MATVASSAAVAVPSFTGLKASGSIKPTTAKIIPTTTAVPRLSVKASLKNVGAAVVATAAA 60
           MATVASSAAVAVPSFTGLKASGSIKPTTAKIIPTTTAVPRLSVKASLKNVGAAVVATAAA
Sbjct: 1   MATVASSAAVAVPSFTGLKASGSIKPTTAKIIPTTTAVPRLSVKASLKNVGAAVVATAAA 60

Query: 61  GLLAGNAMAVEVLLGGGDGSLAFLPGDFSVASGEEIVFKNNAGFPHNVVFDEDEIPSGVD 120
           GLLAGNAMAVEVLLGGGDGSLAFLPGDFSVASGEEIVFKNNAGFPHNVVFDEDEIPSGVD
Sbjct: 61  GLLAGNAMAVEVLLGGGDGSLAFLPGDFSVASGEEIVFKNNAGFPHNVVFDEDEIPSGVD 120

Query: 121 AAKISMSEEDLLNAPGETYKVTLTEKGTYKFYCSPHQGAGMVGKVTVN 169
           AAKISMSEEDLLNAPGETYKVTLTEKGTYKFYCSPHQGAGMVGKVTVN
Sbjct: 121 AAKISMSEEDLLNAPGETYKVTLTEKGTYKFYCSPHQGAGMVGKVTVN 168

[Close]

BLAST of Spo21430.1 vs. ExPASy Swiss-Prot
Match: PLAS_SILLB (Plastocyanin, chloroplastic OS=Silene latifolia subsp. alba GN=PETE PE=1 SV=1)

HSP 1 Score: 239.6 bits (610), Expect = 2.500e-62
Identity = 125/168 (74.40%), Postives = 139/168 (82.74%), Query Frame = 1

		  
Query: 1   MATVASSAAVAVPSFTGLKASGSIKPTTAKIIPTTTAVPRLSVKASLKNVGAAVVATAAA 60
           MATV SSAAVA+PSF GLKAS + +  T K+     A PR+S+KASLK+VG  V ATAAA
Sbjct: 1   MATVTSSAAVAIPSFAGLKASSTTRAATVKV---AVATPRMSIKASLKDVGVVVAATAAA 60

Query: 61  GLLAGNAMAVEVLLGGGDGSLAFLPGDFSVASGEEIVFKNNAGFPHNVVFDEDEIPSGVD 120
           G+LAGNAMA EVLLG  DG LAF+P D S+ASGE+I FKNNAGFPHNVVFDEDE+P+GVD
Sbjct: 61  GILAGNAMAAEVLLGSSDGGLAFVPSDLSIASGEKITFKNNAGFPHNVVFDEDEVPAGVD 120

Query: 121 AAKISMSEEDLLNAPGETYKVTLTEKGTYKFYCSPHQGAGMVGKVTVN 169
             KISM EEDLLNAPGE Y VTLTEKGTYKFYC+PH GAGMVGKVTVN
Sbjct: 121 VTKISMPEEDLLNAPGEEYSVTLTEKGTYKFYCAPHAGAGMVGKVTVN 165

[Close]

BLAST of Spo21430.1 vs. ExPASy Swiss-Prot
Match: PLAS2_ARATH (Plastocyanin major isoform, chloroplastic OS=Arabidopsis thaliana GN=DRT112 PE=1 SV=2)

HSP 1 Score: 228.0 bits (580), Expect = 7.600e-59
Identity = 122/168 (72.62%), Postives = 138/168 (82.14%), Query Frame = 1

		  
Query: 1   MATVASSAAVAVPSFTGLKASGSIKPTTAKIIPTTTAVPRLSVKASLKNVGAAVVATAAA 60
           MA+V +SA VA+PSFTGLKAS      T +I     A P+L+VK+SLKN G A VA AA+
Sbjct: 1   MASV-TSATVAIPSFTGLKASTIKSSATVRIQTAAVASPKLTVKSSLKNFGVAAVAAAAS 60

Query: 61  GLLAGNAMAVEVLLGGGDGSLAFLPGDFSVASGEEIVFKNNAGFPHNVVFDEDEIPSGVD 120
             LAGNAMA+EVLLGGGDGSLAF+P DFS+A GE+IVFKNNAG+PHNVVFDEDEIPSGVD
Sbjct: 61  IALAGNAMAIEVLLGGGDGSLAFIPNDFSIAKGEKIVFKNNAGYPHNVVFDEDEIPSGVD 120

Query: 121 AAKISMSEEDLLNAPGETYKVTLTEKGTYKFYCSPHQGAGMVGKVTVN 169
            AKISM E+DLLN  GETY+V LTE GTY FYC+PHQGAGMVGKVTVN
Sbjct: 121 VAKISMDEQDLLNGAGETYEVALTEPGTYSFYCAPHQGAGMVGKVTVN 167

[Close]

BLAST of Spo21430.1 vs. ExPASy Swiss-Prot
Match: PLAS_SOLLC (Plastocyanin, chloroplastic OS=Solanum lycopersicum GN=PETE PE=2 SV=1)

HSP 1 Score: 227.6 bits (579), Expect = 9.900e-59
Identity = 127/171 (74.27%), Postives = 143/171 (83.63%), Query Frame = 1

		  
Query: 1   MATVASSAAVAVPSFTGLKA---SGSIKPTTAKIIPTTTAVPRLSVKASLKNVGAAVVAT 60
           MATV +SAAVA+PSFTGLKA   S S   T A        V RL+VKASLK+VGA V AT
Sbjct: 1   MATV-TSAAVAIPSFTGLKAGASSSSRVSTGASAKVAAAPVARLTVKASLKDVGAVVAAT 60

Query: 61  AAAGLLAGNAMAVEVLLGGGDGSLAFLPGDFSVASGEEIVFKNNAGFPHNVVFDEDEIPS 120
           A + +LA NAMA+EVLLGG DGSLAF+PG+FSV++GE+I FKNNAGFPHNVVFDEDEIP+
Sbjct: 61  AVSAMLASNAMALEVLLGGDDGSLAFIPGNFSVSAGEKITFKNNAGFPHNVVFDEDEIPA 120

Query: 121 GVDAAKISMSEEDLLNAPGETYKVTLTEKGTYKFYCSPHQGAGMVGKVTVN 169
           GVDA+KISMSEEDLLNA GETY VTL+EKGTY FYC+PHQGAGMVGKVTVN
Sbjct: 121 GVDASKISMSEEDLLNAAGETYSVTLSEKGTYTFYCAPHQGAGMVGKVTVN 170

[Close]

BLAST of Spo21430.1 vs. ExPASy Swiss-Prot
Match: PLAS1_POPNI (Plastocyanin A, chloroplastic OS=Populus nigra GN=PETE PE=1 SV=2)

HSP 1 Score: 221.9 bits (564), Expect = 5.400e-57
Identity = 119/169 (70.41%), Postives = 144/169 (85.21%), Query Frame = 1

		  
Query: 1   MATVASSAAVAVPSFTGLKA-SGSIKPTTAKIIPTTTAVPRLSVKASLKNVGAAVVATAA 60
           MATV +SAAV++PSFTGLKA S S    +A    + + +PRLS+KAS+K+VGAAVVATAA
Sbjct: 1   MATV-TSAAVSIPSFTGLKAGSASNAKVSASAKVSASPLPRLSIKASMKDVGAAVVATAA 60

Query: 61  AGLLAGNAMAVEVLLGGGDGSLAFLPGDFSVASGEEIVFKNNAGFPHNVVFDEDEIPSGV 120
           + ++A NAMA++VLLG  DGSLAF+P +FS++ GE+IVFKNNAGFPHN+VFDED IPSGV
Sbjct: 61  SAMIASNAMAIDVLLGADDGSLAFVPSEFSISPGEKIVFKNNAGFPHNIVFDEDSIPSGV 120

Query: 121 DAAKISMSEEDLLNAPGETYKVTLTEKGTYKFYCSPHQGAGMVGKVTVN 169
           DA+KISMSEEDLLNA GET++V L+ KG Y FYCSPHQGAGMVGKVTVN
Sbjct: 121 DASKISMSEEDLLNAKGETFEVALSNKGEYSFYCSPHQGAGMVGKVTVN 168

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BLAST of Spo21430.1 vs. TAIR (Arabidopsis)
Match: AT1G20340.1 (Cupredoxin superfamily protein)

HSP 1 Score: 228.0 bits (580), Expect = 4.300e-60
Identity = 122/168 (72.62%), Postives = 138/168 (82.14%), Query Frame = 1

		  
Query: 1   MATVASSAAVAVPSFTGLKASGSIKPTTAKIIPTTTAVPRLSVKASLKNVGAAVVATAAA 60
           MA+V +SA VA+PSFTGLKAS      T +I     A P+L+VK+SLKN G A VA AA+
Sbjct: 1   MASV-TSATVAIPSFTGLKASTIKSSATVRIQTAAVASPKLTVKSSLKNFGVAAVAAAAS 60

Query: 61  GLLAGNAMAVEVLLGGGDGSLAFLPGDFSVASGEEIVFKNNAGFPHNVVFDEDEIPSGVD 120
             LAGNAMA+EVLLGGGDGSLAF+P DFS+A GE+IVFKNNAG+PHNVVFDEDEIPSGVD
Sbjct: 61  IALAGNAMAIEVLLGGGDGSLAFIPNDFSIAKGEKIVFKNNAGYPHNVVFDEDEIPSGVD 120

Query: 121 AAKISMSEEDLLNAPGETYKVTLTEKGTYKFYCSPHQGAGMVGKVTVN 169
            AKISM E+DLLN  GETY+V LTE GTY FYC+PHQGAGMVGKVTVN
Sbjct: 121 VAKISMDEQDLLNGAGETYEVALTEPGTYSFYCAPHQGAGMVGKVTVN 167

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BLAST of Spo21430.1 vs. TAIR (Arabidopsis)
Match: AT1G76100.1 (plastocyanin 1)

HSP 1 Score: 208.8 bits (530), Expect = 2.700e-54
Identity = 113/166 (68.07%), Postives = 134/166 (80.72%), Query Frame = 1

		  
Query: 6   SSAAVAVPSFTGLKASGSIKPTTAKIIPTTT----AVPRLSVKASLKNVGAAVVATAAAG 65
           +SA V +PSFTGLK + S KP T   I  +T    A P+L++K+SLK+ G   VATAA+ 
Sbjct: 5   TSATVTIPSFTGLKLAVSSKPKTLSTISRSTSATRAPPKLALKSSLKDFGVIAVATAASI 64

Query: 66  LLAGNAMAVEVLLGGGDGSLAFLPGDFSVASGEEIVFKNNAGFPHNVVFDEDEIPSGVDA 125
           +LAGNAMA+EVLLG  DGSLAF+P +F+VA GE+IVFKNNAGFPHNVVFDEDEIPSGVDA
Sbjct: 65  VLAGNAMAMEVLLGSDDGSLAFVPSEFTVAKGEKIVFKNNAGFPHNVVFDEDEIPSGVDA 124

Query: 126 AKISMSEEDLLNAPGETYKVTLTEKGTYKFYCSPHQGAGMVGKVTV 168
           +KISM E  LLN  GETY+VTLTE G+Y FYC+PHQGAGMVGK+TV
Sbjct: 125 SKISMDETALLNGAGETYEVTLTEPGSYGFYCAPHQGAGMVGKLTV 170

The following BLAST results are available for this feature:

BLAST of Spo21430.1 vs. NCBI nr
BLAST of Spo21430.1 vs. UniProtKB/TrEMBL
BLAST of Spo21430.1 vs. ExPASy Swiss-Prot
BLAST of Spo21430.1 vs. TAIR (Arabidopsis)

BLAST of Spo21430.1 vs. NCBI nr
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. NCBI nr)
Total hits: 5

Position :

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Match Name	E-value	Identity	Description
gi\|130285\|sp\|P00289.2\|PLAS_SPIOL	3.7e-82	100.	RecName: Full=Plastocyanin, ch...	[more]
gi\|731373750\|ref\|XP_010666739.1\|	9.5e-70	85.1	PREDICTED: plastocyanin, chlor...	[more]
gi\|802607282\|ref\|XP_012073717.1\|	3.6e-61	78.1	PREDICTED: plastocyanin [Jatro...	[more]
gi\|130282\|sp\|P07030.1\|PLAS_SILLB	4.0e-60	74.4	RecName: Full=Plastocyanin, ch...	[more]
gi\|1012203378\|ref\|XP_015973807.1\|	4.0e-60	75.2	PREDICTED: plastocyanin [Arach...	[more]

BLAST of Spo21430.1 vs. UniProtKB/TrEMBL
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. UniprotKB/TrEMBL)
Total hits: 5

Position :

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Match Name	E-value	Identity	Description
A0A0K9QSA8_SPIOL	2.6e-82	100.	Plastocyanin OS=Spinacia olera...	[more]
A0A0J8B4F7_BETVU	6.6e-70	85.1	Plastocyanin OS=Beta vulgaris ...	[more]
A0A067KPD8_JATCU	2.5e-61	78.1	Plastocyanin OS=Jatropha curca...	[more]
C6SZV4_SOYBN	1.5e-58	76.1	Plastocyanin OS=Glycine max PE...	[more]
U5TZM8_PHAVU	3.4e-58	74.4	Plastocyanin OS=Phaseolus vulg...	[more]

BLAST of Spo21430.1 vs. ExPASy Swiss-Prot
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. ExPASy SwissProt)
Total hits: 5

Position :

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Match Name	E-value	Identity	Description
PLAS_SPIOL	2.3e-84	100.	Plastocyanin, chloroplastic OS...	[more]
PLAS_SILLB	2.5e-62	74.4	Plastocyanin, chloroplastic OS...	[more]
PLAS2_ARATH	7.6e-59	72.6	Plastocyanin major isoform, ch...	[more]
PLAS_SOLLC	9.9e-59	74.2	Plastocyanin, chloroplastic OS...	[more]
PLAS1_POPNI	5.4e-57	70.4	Plastocyanin A, chloroplastic ...	[more]

BLAST of Spo21430.1 vs. TAIR (Arabidopsis)
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. TAIR)
Total hits: 2

Position :

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Match Name	E-value	Identity	Description
AT1G20340.1	4.3e-60	72.6	Cupredoxin superfamily protein	[more]
AT1G76100.1	2.7e-54	68.0	plastocyanin 1	[more]

InterPro

Analysis Name: InterPro Annotations of S. oleracea
Date Performed: 2018-06-29

Position :

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IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR000923	Blue (type 1) copper domain	PFAM	PF00127	Copper-bind	coord: 71..168 score: 8.3
IPR001235	Blue (type 1) copper protein, plastocyanin-type	PRINTS	PR00156	COPPERBLUE	coord: 104..119 score: 8.8E-14coord: 145..159 score: 8.8E-14coord: 89..102 score: 8.8
IPR002387	Plastocyanin	PRINTS	PR00157	PLASTOCYANIN	coord: 98..116 score: 5.0E-33coord: 147..166 score: 5.0E-33coord: 75..94 score: 5.0
IPR002387	Plastocyanin	TIGRFAMs	TIGR02656	TIGR02656	coord: 70..168 score: 3.8
IPR008972	Cupredoxin	GENE3D	2.60.40.420		coord: 71..168 score: 1.9
IPR008972	Cupredoxin	unknown	SSF49503	Cupredoxins	coord: 67..168 score: 6.41
None	No IPR available	PANTHER	PTHR34192	FAMILY NOT NAMED	coord: 1..168 score: 1.7
None	No IPR available	PANTHER	PTHR34192:SF2	PLASTOCYANIN MAJOR ISOFORM, CHLOROPLASTIC-RELATED	coord: 1..168 score: 1.7

GO Annotation

GO Assignments

This mRNA is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0000271	polysaccharide biosynthetic process
biological_process	GO:0048767	root hair elongation
biological_process	GO:0010114	response to red light
biological_process	GO:0009644	response to high light intensity
biological_process	GO:0010218	response to far red light
biological_process	GO:0046686	response to cadmium ion
biological_process	GO:0009637	response to blue light
biological_process	GO:0010155	regulation of proton transport
biological_process	GO:0010817	regulation of hormone levels
biological_process	GO:0045893	positive regulation of transcription, DNA-templated
biological_process	GO:0009657	plastid organization
biological_process	GO:0006098	pentose-phosphate shunt
biological_process	GO:0055114	oxidation-reduction process
biological_process	GO:0017148	negative regulation of translation
biological_process	GO:0009825	multidimensional cell growth
biological_process	GO:0009965	leaf morphogenesis
biological_process	GO:0042744	hydrogen peroxide catabolic process
biological_process	GO:0019344	cysteine biosynthetic process
biological_process	GO:0055070	copper ion homeostasis
biological_process	GO:0071555	cell wall organization
biological_process	GO:0009932	cell tip growth
biological_process	GO:0043481	anthocyanin accumulation in tissues in response to UV light
biological_process	GO:0009744	response to sucrose
cellular_component	GO:0009543	chloroplast thylakoid lumen
cellular_component	GO:0009535	chloroplast thylakoid membrane
cellular_component	GO:0009570	chloroplast stroma
molecular_function	GO:0009055	electron transfer activity
molecular_function	GO:0005507	copper ion binding