Overview
Sequences
The following sequences are available for this feature:
Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.ATTGAGTGTGACATGATGGCTGGCTTTACTGGCCTCACTTGTAAGTCTGACCCCGTCAACCTAAAAAAAAACAAAGCAAAAAGATACAATAATTGACATAGAGGATGTACACTACACCACAATTCATTCCTCCTTTCTTTGCTTCAGTTCTCTGAAAATACACTTCAAATGGCTACTGCCTACTGGTATGGTACTCACTGTTGCTCAGACGCTGCTTTCTGCACTGCAAACTAAGGAGGTGAGACAACTTTGCTCCTTGTTTGCGCATGAATCCCAACTTGCAGACCTCGAGCGAACTGTTGAAACCATCAATGCTGTCCTTCTTGATTCAGAGCCCAAACACCAGGAACTCAACAGTGAGGGAAAAGATTGGATTGGCAAGCTCAAAGATGCTGTCTATGATGCTGATGATTTGTTCGATAAATTCAACACTATTGCTCAGAAGCAGAAAAGTGTGCCTGGTGGTAAGATCTCCAAAAAGGTACGCCGTTTCTTCTCTGGTGAGAACCAGTTGCTTTTTGCTGCTAATACATCTCGCAAGATTAAAAAGCTTAGAATGAAGTTGGATGGCATTGCTGAAGATCGTGCTAAGTTTGGCTTTAGTGATGTATATATACCTGTTAAGAGGAGAGAAGAAACATCTTCCTATGTGAATGAACACAGTATTATAGGGAGAGATGCTGACAAGAAGGCTATTCTGGATCTGCTGTTTCAAGACTCAGATGCTGCTGAAGATAATGTTTCTTTTGTGAGTATTGTTGGGATCGGTGGGTTGGGAAAAACTGCACTTGCTCAATTTGTGTTTCAAGATGATATGATCAAAAGTTCATTTGAATTGTGCTTTTGGGTTTGTGTCTCTGAAGAATTTGGTTTGAAAGAAATCCTTTCCAAGATGCTTGGTAAGAGTACTGAGCTTAATCTAGAAGGGCTACAGAAGGAGGTTCGTGATAAGGGAGCTCGGATAGCTCTCCTTTAATGGAAGCCAACAACAGATTCTAAAAGAAGAATGTGACTCAGAGATAAGAAGAAGAAGAGAATTCAGAATTCAGATGAAAGGAGAGAGAGAGAGAGAGAGAGAGAGAGTTTGGGAAGATTTGTATTGTATTATGATGCTAATACAATGTACCCGAATTAGTTTATAAGCTGCCAAAAACAGCTAACTAACTCTCTAACAAACCCCCTAATTTTAAGCAACTTATTCTTCAAGCTAGCTAACAACTTTAACTAACTTTCCCGCCAAAACTTCCAATGATCACATTTGATCATTTGGATTTAAAAACTGAAAATTAAAGAGAATAAAGAGTTCTCCTATAACAATACTTCCCCCTTTAAGAGACTTGTCCTCAAGTCTTAAACTGTGAAAGTAGGAAACTGAGCTTGAAAGGTAGTGGCAGCTTCCCAAGTGGCTTCATGGTCTGCAAATCCAGTCCAGCTGACTAAATATTGATCCTGTGGAACATCATTAATCATCACCACACGCTTGTCAAGTATAGCAGCAGGCTGAATAGGGTTCAAGGAGGGATCAGTGCCAGAAAACCAATCTGGTATGTGAGCTGCAATAGGAAGTGCTCCTTGGAACCTCTTGAGTTGTGATACATGAAAAACATTGTGTATCTTAGCATCTGCAGGCAACTT ATTGAGTGTGACATGATGGCTGGCTTTACTGGCCTCACTTTTCTCTGAAAATACACTTCAAATGGCTACTGCCTACTGGTATGGTACTCACTGTTGCTCAGACGCTGCTTTCTGCACTGCAAACTAAGGAGGTGAGACAACTTTGCTCCTTGTTTGCGCATGAATCCCAACTTGCAGACCTCGAGCGAACTGTTGAAACCATCAATGCTGTCCTTCTTGATTCAGAGCCCAAACACCAGGAACTCAACAGTGAGGGAAAAGATTGGATTGGCAAGCTCAAAGATGCTGTCTATGATGCTGATGATTTGTTCGATAAATTCAACACTATTGCTCAGAAGCAGAAAAGTGTGCCTGGTGGTAAGATCTCCAAAAAGGTACGCCGTTTCTTCTCTGGTGAGAACCAGTTGCTTTTTGCTGCTAATACATCTCGCAAGATTAAAAAGCTTAGAATGAAGTTGGATGGCATTGCTGAAGATCGTGCTAAGTTTGGCTTTAGTGATGTATATATACCTGTTAAGAGGAGAGAAGAAACATCTTCCTATGTGAATGAACACAGTATTATAGGGAGAGATGCTGACAAGAAGGCTATTCTGGATCTGCTGTTTCAAGACTCAGATGCTGCTGAAGATAATGTTTCTTTTGTGAGTATTGTTGGGATCGGTGGGTTGGGAAAAACTGCACTTGCTCAATTTGTGTTTCAAGATGATATGATCAAAAGTTCATTTGAATTGTGCTTTTGGGTTTGTGTCTCTGAAGAATTTGGTTTGAAAGAAATCCTTTCCAAGATGCTTGGTAAGAGTACTGAGCTTAATCTAGAAGGGCTACAGAAGGAGGTTCGTGATAAGGGAGCTCGGATAGCTCTCCTTTAATGGAAGCCAACAACAGATTCTAAAAGAAGAATGTGACTCAGAGATAAGAAGAAGAAGAGAATTCAGAATTCAGATGAAAGGAGAGAGAGAGAGAGAGAGAGAGAGAGTTTGGGAAGATTTGTATTGTATTATGATGCTAATACAATGTACCCGAATTAGTTTATAAGCTGCCAAAAACAGCTAACTAACTCTCTAACAAACCCCCTAATTTTAAGCAACTTATTCTTCAAGCTAGCTAACAACTTTAACTAACTTTCCCGCCAAAACTTCCAATGATCACATTTGATCATTTGGATTTAAAAACTGAAAATTAAAGAGAATAAAGAGTTCTCCTATAACAATACTTCCCCCTTTAAGAGACTTGTCCTCAAGTCTTAAACTGTGAAAGTAGGAAACTGAGCTTGAAAGGTAGTGGCAGCTTCCCAAGTGGCTTCATGGTCTGCAAATCCAGTCCAGCTGACTAAATATTGATCCTGTGGAACATCATTAATCATCACCACACGCTTGTCAAGTATAGCAGCAGGCTGAATAGGGTTCAAGGAGGGATCAGTGCCAGAAAACCAATCTGGTATGTGAGCTGCAATAGGAAGTGCTCCTTGGAACCTCTTGAGTTGTGATACATGAAAAACATTGTGTATCTTAGCATCTGCAGGCAACTT ATGGTACTCACTGTTGCTCAGACGCTGCTTTCTGCACTGCAAACTAAGGAGGTGAGACAACTTTGCTCCTTGTTTGCGCATGAATCCCAACTTGCAGACCTCGAGCGAACTGTTGAAACCATCAATGCTGTCCTTCTTGATTCAGAGCCCAAACACCAGGAACTCAACAGTGAGGGAAAAGATTGGATTGGCAAGCTCAAAGATGCTGTCTATGATGCTGATGATTTGTTCGATAAATTCAACACTATTGCTCAGAAGCAGAAAAGTGTGCCTGGTGGTAAGATCTCCAAAAAGGTACGCCGTTTCTTCTCTGGTGAGAACCAGTTGCTTTTTGCTGCTAATACATCTCGCAAGATTAAAAAGCTTAGAATGAAGTTGGATGGCATTGCTGAAGATCGTGCTAAGTTTGGCTTTAGTGATGTATATATACCTGTTAAGAGGAGAGAAGAAACATCTTCCTATGTGAATGAACACAGTATTATAGGGAGAGATGCTGACAAGAAGGCTATTCTGGATCTGCTGTTTCAAGACTCAGATGCTGCTGAAGATAATGTTTCTTTTGTGAGTATTGTTGGGATCGGTGGGTTGGGAAAAACTGCACTTGCTCAATTTGTGTTTCAAGATGATATGATCAAAAGTTCATTTGAATTGTGCTTTTGGGTTTGTGTCTCTGAAGAATTTGGTTTGAAAGAAATCCTTTCCAAGATGCTTGGTAAGAGTACTGAGCTTAATCTAGAAGGGCTACAGAAGGAGGTTCGTGATAAGGGAGCTCGGATAGCTCTCCTTTAA MVLTVAQTLLSALQTKEVRQLCSLFAHESQLADLERTVETINAVLLDSEPKHQELNSEGKDWIGKLKDAVYDADDLFDKFNTIAQKQKSVPGGKISKKVRRFFSGENQLLFAANTSRKIKKLRMKLDGIAEDRAKFGFSDVYIPVKRREETSSYVNEHSIIGRDADKKAILDLLFQDSDAAEDNVSFVSIVGIGGLGKTALAQFVFQDDMIKSSFELCFWVCVSEEFGLKEILSKMLGKSTELNLEGLQKEVRDKGARIALL Relationships
The following mRNA feature(s) are a part of this gene:
Homology
BLAST of Spo03699.1 vs. NCBI nr
Match: gi|731350382|ref|XP_010686475.1| (PREDICTED: uncharacterized protein LOC104900682 [Beta vulgaris subsp. vulgaris]) HSP 1 Score: 339.7 bits (870), Expect = 4.400e-90 Identity = 177/258 (68.60%), Postives = 214/258 (82.95%), Query Frame = 1
BLAST of Spo03699.1 vs. NCBI nr
Match: gi|731378376|ref|XP_010668158.1| (PREDICTED: putative disease resistance protein RGA1 [Beta vulgaris subsp. vulgaris]) HSP 1 Score: 332.4 bits (851), Expect = 7.100e-88 Identity = 176/258 (68.22%), Postives = 210/258 (81.40%), Query Frame = 1
BLAST of Spo03699.1 vs. NCBI nr
Match: gi|731378380|ref|XP_010668159.1| (PREDICTED: putative disease resistance protein RGA3, partial [Beta vulgaris subsp. vulgaris]) HSP 1 Score: 330.9 bits (847), Expect = 2.100e-87 Identity = 175/258 (67.83%), Postives = 211/258 (81.78%), Query Frame = 1
BLAST of Spo03699.1 vs. NCBI nr
Match: gi|731378564|ref|XP_010668216.1| (PREDICTED: putative disease resistance protein RGA3 [Beta vulgaris subsp. vulgaris]) HSP 1 Score: 330.1 bits (845), Expect = 3.500e-87 Identity = 175/258 (67.83%), Postives = 212/258 (82.17%), Query Frame = 1
BLAST of Spo03699.1 vs. NCBI nr
Match: gi|731359012|ref|XP_010691057.1| (PREDICTED: disease resistance protein RGA2-like [Beta vulgaris subsp. vulgaris]) HSP 1 Score: 288.9 bits (738), Expect = 9.000e-75 Identity = 163/263 (61.98%), Postives = 202/263 (76.81%), Query Frame = 1
BLAST of Spo03699.1 vs. UniProtKB/TrEMBL
Match: J3SIC7_BETVU (CC-NBS-LRR type resistance protein OS=Beta vulgaris subsp. vulgaris PE=3 SV=1) HSP 1 Score: 248.4 bits (633), Expect = 9.400e-63 Identity = 134/249 (53.82%), Postives = 173/249 (69.48%), Query Frame = 1
BLAST of Spo03699.1 vs. UniProtKB/TrEMBL
Match: A0A0J8B353_BETVU (Uncharacterized protein OS=Beta vulgaris subsp. vulgaris GN=BVRB_007230 PE=4 SV=1) HSP 1 Score: 208.0 bits (528), Expect = 1.400e-50 Identity = 117/242 (48.35%), Postives = 165/242 (68.18%), Query Frame = 1
BLAST of Spo03699.1 vs. UniProtKB/TrEMBL
Match: A0A0J8B7R7_BETVU (Uncharacterized protein OS=Beta vulgaris subsp. vulgaris GN=BVRB_004610 PE=3 SV=1) HSP 1 Score: 190.3 bits (482), Expect = 3.000e-45 Identity = 106/227 (46.70%), Postives = 151/227 (66.52%), Query Frame = 1
BLAST of Spo03699.1 vs. UniProtKB/TrEMBL
Match: A0A0D2R508_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_007G365900 PE=3 SV=1) HSP 1 Score: 183.3 bits (464), Expect = 3.700e-43 Identity = 108/263 (41.06%), Postives = 162/263 (61.60%), Query Frame = 1
BLAST of Spo03699.1 vs. UniProtKB/TrEMBL
Match: A0A061EA34_THECC (LRR and NB-ARC domains-containing disease resistance protein, putative OS=Theobroma cacao GN=TCM_011164 PE=3 SV=1) HSP 1 Score: 181.8 bits (460), Expect = 1.100e-42 Identity = 107/255 (41.96%), Postives = 158/255 (61.96%), Query Frame = 1
BLAST of Spo03699.1 vs. ExPASy Swiss-Prot
Match: RGA2_SOLBU (Disease resistance protein RGA2 OS=Solanum bulbocastanum GN=RGA2 PE=1 SV=1) HSP 1 Score: 113.6 bits (283), Expect = 3.200e-24 Identity = 80/255 (31.37%), Postives = 130/255 (50.98%), Query Frame = 1
BLAST of Spo03699.1 vs. ExPASy Swiss-Prot
Match: RGA1_SOLBU (Putative disease resistance protein RGA1 OS=Solanum bulbocastanum GN=RGA1 PE=2 SV=2) HSP 1 Score: 111.7 bits (278), Expect = 1.200e-23 Identity = 78/255 (30.59%), Postives = 134/255 (52.55%), Query Frame = 1
BLAST of Spo03699.1 vs. ExPASy Swiss-Prot
Match: RGA3_SOLBU (Putative disease resistance protein RGA3 OS=Solanum bulbocastanum GN=RGA3 PE=2 SV=2) HSP 1 Score: 109.8 bits (273), Expect = 4.700e-23 Identity = 79/254 (31.10%), Postives = 128/254 (50.39%), Query Frame = 1
BLAST of Spo03699.1 vs. ExPASy Swiss-Prot
Match: R13L1_ARATH (Putative disease resistance RPP13-like protein 1 OS=Arabidopsis thaliana GN=RPPL1 PE=3 SV=1) HSP 1 Score: 103.6 bits (257), Expect = 3.300e-21 Identity = 73/244 (29.92%), Postives = 128/244 (52.46%), Query Frame = 1
BLAST of Spo03699.1 vs. ExPASy Swiss-Prot
Match: RGA4_SOLBU (Putative disease resistance protein RGA4 OS=Solanum bulbocastanum GN=RGA4 PE=2 SV=1) HSP 1 Score: 103.6 bits (257), Expect = 3.300e-21 Identity = 75/251 (29.88%), Postives = 120/251 (47.81%), Query Frame = 1
BLAST of Spo03699.1 vs. TAIR (Arabidopsis)
Match: AT3G14470.1 (NB-ARC domain-containing disease resistance protein) HSP 1 Score: 103.6 bits (257), Expect = 1.900e-22 Identity = 73/244 (29.92%), Postives = 128/244 (52.46%), Query Frame = 1
BLAST of Spo03699.1 vs. TAIR (Arabidopsis)
Match: AT1G58602.1 (LRR and NB-ARC domains-containing disease resistance protein) HSP 1 Score: 85.1 bits (209), Expect = 6.900e-17 Identity = 70/263 (26.62%), Postives = 125/263 (47.53%), Query Frame = 1
BLAST of Spo03699.1 vs. TAIR (Arabidopsis)
Match: AT1G53350.1 (Disease resistance protein (CC-NBS-LRR class) family) HSP 1 Score: 83.6 bits (205), Expect = 2.000e-16 Identity = 64/228 (28.07%), Postives = 121/228 (53.07%), Query Frame = 1
BLAST of Spo03699.1 vs. TAIR (Arabidopsis)
Match: AT1G58410.1 (Disease resistance protein (CC-NBS-LRR class) family) HSP 1 Score: 81.6 bits (200), Expect = 7.700e-16 Identity = 56/211 (26.54%), Postives = 110/211 (52.13%), Query Frame = 1
BLAST of Spo03699.1 vs. TAIR (Arabidopsis)
Match: AT1G59780.1 (NB-ARC domain-containing disease resistance protein) HSP 1 Score: 81.3 bits (199), Expect = 1.000e-15 Identity = 61/235 (25.96%), Postives = 119/235 (50.64%), Query Frame = 1
The following BLAST results are available for this feature:
BLAST of Spo03699.1 vs. NCBI nr
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. NCBI nr) Total hits: 5
BLAST of Spo03699.1 vs. UniProtKB/TrEMBL
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. UniprotKB/TrEMBL) Total hits: 5
BLAST of Spo03699.1 vs. ExPASy Swiss-Prot
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. ExPASy SwissProt) Total hits: 5
BLAST of Spo03699.1 vs. TAIR (Arabidopsis)
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. TAIR) Total hits: 5
InterPro
Analysis Name: InterPro Annotations of S. oleracea
Date Performed: 2018-06-29
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
RNA-Seq Expression
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