Spo19206 (gene)

Overview
NameSpo19206
Typegene
OrganismSpinacia oleracea (Spinach)
DescriptionrRNA intron-encoded homing endonuclease
LocationSpoScf_30023 : 125 .. 1059 (+)
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGATAACTCGACGGATCGCACGGCCTTTGCGCCGGCGACGCATCATTCAAATTTCTGCCCTATCAACTTTCGATGGTAGGATAGTGGCCTACCATGGTGGTGACGGGTGACGGAGAATTAGGGTTCGATTCCGGAGAGGGAGCCTGAGAAACGGCTACCACATCCAAGGAAGGCAGCAGGCGCGCAAATTACCCAATCCTGACACGGGGAGGTAGTGACAATAAATAACAATACCGGGCTCATTGAGTCTGGTAATTGGAATGAGTACAATCTAAATCCCTTAACGAGGATCCATTGGAGGGCAAGTCTGGTGCCAGCAGCCGCGGTAATTCCAGCTCCAATAGCGTATATTTAAGTTGTTGCAGTTAAAAAGCTCGTAGTTGGACCTTGGGGTGGTACGACCGGTCCGCCTTTTGGTGTGCACCGGCCGTCTCGCCTCTTTCGCCGGTGATGCGCTCCTGGCCTTAATTGGCCGGGTCGTGCCTCCGGCACTGTTACTTTGAAGAAATTAGAGTGCTCAAAGCAAGCCTACGCTCTGTATACATTAGCATGGGATAACATTATAGGATTCCGGTCCTATTGTGTTGGCCTTCGGGATCGGAGTAATGATTAACAGGGACAGTCGGGGGCATTCGTATTTCATAGTCAGAGGTGAAATTCTTGGATTTATGAAAGACGAACAACTGCGAAAGCATTTGCCAAGGATGTTTTCATTAATCAAGAACGAAAGTTGGGGGCTCGAAGACGATCAGATACCGTCCTAGTCTCAACCATAAACGATGCCGACCAGGGATCGGCGGATGTTACTTTTAGGACGCCGCCGGCACCTTATGAGAAATCAAAGTTTTTGGGTTCCGGGGGGAGTATGGTCGCAAGGCTGAAACTTAAAGGAATTGACGGAAGGGCACCACCAGGAGTGGAGCCTGCGGCTTAA

mRNA sequence

ATGATAACTCGACGGATCGCACGGCCTTTGCGCCGGCGACGCATCATTCAAATTTCTGCCCTATCAACTTTCGATGTTAAAAAGCTCGTAGTTGGACCTTGGGGTGGTACGACCGGTCCGCCTTTTGGTGTGCACCGGCCGTCTCGCCTCTTTCGCCGACGAACAACTGCGAAAGCATTTGCCAAGGATGTTTTCATTAATCAAGAACGAAAGTTGGGGGCTCGAAGACGATCAGATACCGTCCTAGTCTCAACCATAAACGATGCCGACCAGGGATCGGCGGATGTTACTTTTAGGACGCCGCCGGCACCTTATGAGAAATCAAAGTTTTTGGGTTCCGGGGGGAGTATGGTCGCAAGGCTGAAACTTAAAGGAATTGACGGAAGGGCACCACCAGGAGTGGAGCCTGCGGCTTAA

Coding sequence (CDS)

ATGATAACTCGACGGATCGCACGGCCTTTGCGCCGGCGACGCATCATTCAAATTTCTGCCCTATCAACTTTCGATGTTAAAAAGCTCGTAGTTGGACCTTGGGGTGGTACGACCGGTCCGCCTTTTGGTGTGCACCGGCCGTCTCGCCTCTTTCGCCGACGAACAACTGCGAAAGCATTTGCCAAGGATGTTTTCATTAATCAAGAACGAAAGTTGGGGGCTCGAAGACGATCAGATACCGTCCTAGTCTCAACCATAAACGATGCCGACCAGGGATCGGCGGATGTTACTTTTAGGACGCCGCCGGCACCTTATGAGAAATCAAAGTTTTTGGGTTCCGGGGGGAGTATGGTCGCAAGGCTGAAACTTAAAGGAATTGACGGAAGGGCACCACCAGGAGTGGAGCCTGCGGCTTAA

Protein sequence

MITRRIARPLRRRRIIQISALSTFDVKKLVVGPWGGTTGPPFGVHRPSRLFRRRTTAKAFAKDVFINQERKLGARRRSDTVLVSTINDADQGSADVTFRTPPAPYEKSKFLGSGGSMVARLKLKGIDGRAPPGVEPAA
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Spo19206.1Spo19206.1mRNA


Homology
[Close]
BLAST of Spo19206.1 vs. NCBI nr
Match: gi|922327215|ref|XP_013443000.1| (rRNA intron-encoded homing endonuclease, putative [Medicago truncatula])

HSP 1 Score: 172.6 bits (436), Expect = 4.900e-40
Identity = 100/147 (68.03%), Postives = 104/147 (70.75%), Query Frame = 1 

		  

Query: 25  DVKKLVVGPWGGTTGPP-----------------------------FGV----HRPSRLF 84
           +VKKLVVGPW G+ GPP                             FG+    +R SR  
Sbjct: 195 NVKKLVVGPWVGSIGPPMVCTGWLVPSAGDALLALIGRDSDPIVLAFGIGVMINRDSR-G 254

Query: 85  RRRTTAKAFAKDVFINQERKLGARRRSDTVLVSTINDADQGSADVTFRTPPAPYEKSKFL 139
             RTTAKAFAKDVFINQERKLGARRRSDTVLVSTINDADQGSADV FRTP APYEKSK L
Sbjct: 255 HSRTTAKAFAKDVFINQERKLGARRRSDTVLVSTINDADQGSADVAFRTPLAPYEKSKSL 314
[Close]
BLAST of Spo19206.1 vs. NCBI nr
Match: gi|694380941|ref|XP_009366572.1| (PREDICTED: uncharacterized protein LOC103956333 [Pyrus x bretschneideri])

HSP 1 Score: 167.9 bits (424), Expect = 1.200e-38
Identity = 99/142 (69.72%), Postives = 102/142 (71.83%), Query Frame = 1 

		  

Query: 5   RIARPLRRR---------RIIQISALSTFDVKKLVVGPWGGTTGPPFGVHRPSRLFRRRT 64
           R ARP  RR         R      L   +  K   GP     G    ++R SR    RT
Sbjct: 231 RSARPFCRRYAPGLNWPGRASGAVTLKKLECSKQDFGPILLAFGIGVMINRDSR---GRT 290

Query: 65  TAKAFAKDVFINQERKLGARRRSDTVLVSTINDADQGSADVTFRTPPAPYEKSKFLGSGG 124
           TAKAFAKDVFINQERKLGARRRSDTVLVSTINDADQGSADVTFRTPPAPYEKSKFLGSGG
Sbjct: 291 TAKAFAKDVFINQERKLGARRRSDTVLVSTINDADQGSADVTFRTPPAPYEKSKFLGSGG 350

Query: 125 SMVARLKLKGIDGRAPPGVEPA 138
           SMVARLKLKGIDGRAPPGVEPA
Sbjct: 351 SMVARLKLKGIDGRAPPGVEPA 369
[Close]
BLAST of Spo19206.1 vs. NCBI nr
Match: gi|1009176457|ref|XP_015869441.1| (PREDICTED: uncharacterized protein LOC107406762 [Ziziphus jujuba])

HSP 1 Score: 167.2 bits (422), Expect = 2.100e-38
Identity = 84/86 (97.67%), Postives = 85/86 (98.84%), Query Frame = 1 

		  

Query: 53  RRTTAKAFAKDVFINQERKLGARRRSDTVLVSTINDADQGSADVTFRTPPAPYEKSKFLG 112
           RRTTAKAFAKDVFINQERKLGARRRSDTVLVSTINDADQGSADV +RTPPAPYEKSKFLG
Sbjct: 602 RRTTAKAFAKDVFINQERKLGARRRSDTVLVSTINDADQGSADVAYRTPPAPYEKSKFLG 661

Query: 113 SGGSMVARLKLKGIDGRAPPGVEPAA 139
           SGGSMVARLKLKGIDGRAPPGVEPAA
Sbjct: 662 SGGSMVARLKLKGIDGRAPPGVEPAA 687
[Close]
BLAST of Spo19206.1 vs. NCBI nr
Match: gi|703137890|ref|XP_010106597.1| (hypothetical protein L484_002552 [Morus notabilis])

HSP 1 Score: 164.5 bits (415), Expect = 1.300e-37
Identity = 84/86 (97.67%), Postives = 84/86 (97.67%), Query Frame = 1 

		  

Query: 53  RRTTAKAFAKDVFINQERKLGARRRSDTVLVSTINDADQGSADVTFRTPPAPYEKSKFLG 112
           RRTTAKAFAKDVFINQERKLGARRRSDTVLVSTINDADQGSADV FRTP APYEKSKFLG
Sbjct: 107 RRTTAKAFAKDVFINQERKLGARRRSDTVLVSTINDADQGSADVAFRTPLAPYEKSKFLG 166

Query: 113 SGGSMVARLKLKGIDGRAPPGVEPAA 139
           SGGSMVARLKLKGIDGRAPPGVEPAA
Sbjct: 167 SGGSMVARLKLKGIDGRAPPGVEPAA 192
[Close]
BLAST of Spo19206.1 vs. NCBI nr
Match: gi|686983426|gb|AIQ78384.1| (rRNA intron-encoded homing endonuclease, partial [Cenchrus americanus])

HSP 1 Score: 164.1 bits (414), Expect = 1.800e-37
Identity = 83/86 (96.51%), Postives = 84/86 (97.67%), Query Frame = 1 

		  

Query: 53  RRTTAKAFAKDVFINQERKLGARRRSDTVLVSTINDADQGSADVTFRTPPAPYEKSKFLG 112
           RRTTAKAFAKDVFINQERKLGARRRSDTVLVSTINDADQGSADV +RTPPAPYEKSK LG
Sbjct: 2   RRTTAKAFAKDVFINQERKLGARRRSDTVLVSTINDADQGSADVAYRTPPAPYEKSKSLG 61

Query: 113 SGGSMVARLKLKGIDGRAPPGVEPAA 139
           SGGSMVARLKLKGIDGRAPPGVEPAA
Sbjct: 62  SGGSMVARLKLKGIDGRAPPGVEPAA 87
[Close]
BLAST of Spo19206.1 vs. UniProtKB/TrEMBL
Match: A0A072TTZ2_MEDTR (Uncharacterized protein OS=Medicago truncatula GN=MTR_0052s0110 PE=4 SV=1)

HSP 1 Score: 172.6 bits (436), Expect = 3.400e-40
Identity = 100/147 (68.03%), Postives = 104/147 (70.75%), Query Frame = 1 

		  

Query: 25  DVKKLVVGPWGGTTGPP-----------------------------FGV----HRPSRLF 84
           +VKKLVVGPW G+ GPP                             FG+    +R SR  
Sbjct: 195 NVKKLVVGPWVGSIGPPMVCTGWLVPSAGDALLALIGRDSDPIVLAFGIGVMINRDSR-G 254

Query: 85  RRRTTAKAFAKDVFINQERKLGARRRSDTVLVSTINDADQGSADVTFRTPPAPYEKSKFL 139
             RTTAKAFAKDVFINQERKLGARRRSDTVLVSTINDADQGSADV FRTP APYEKSK L
Sbjct: 255 HSRTTAKAFAKDVFINQERKLGARRRSDTVLVSTINDADQGSADVAFRTPLAPYEKSKSL 314
[Close]
BLAST of Spo19206.1 vs. UniProtKB/TrEMBL
Match: M1DUP9_SOLTU (Uncharacterized protein OS=Solanum tuberosum GN=PGSC0003DMG400044276 PE=4 SV=1)

HSP 1 Score: 168.3 bits (425), Expect = 6.500e-39
Identity = 85/86 (98.84%), Postives = 85/86 (98.84%), Query Frame = 1 

		  

Query: 53  RRTTAKAFAKDVFINQERKLGARRRSDTVLVSTINDADQGSADVTFRTPPAPYEKSKFLG 112
           RRTTAKAFAKDVFINQERKLGARRRSDTVLVSTINDADQGSADV FRTPPAPYEKSKFLG
Sbjct: 100 RRTTAKAFAKDVFINQERKLGARRRSDTVLVSTINDADQGSADVAFRTPPAPYEKSKFLG 159

Query: 113 SGGSMVARLKLKGIDGRAPPGVEPAA 139
           SGGSMVARLKLKGIDGRAPPGVEPAA
Sbjct: 160 SGGSMVARLKLKGIDGRAPPGVEPAA 185
[Close]
BLAST of Spo19206.1 vs. UniProtKB/TrEMBL
Match: M1D925_SOLTU (Uncharacterized protein OS=Solanum tuberosum GN=PGSC0003DMG400034813 PE=4 SV=1)

HSP 1 Score: 168.3 bits (425), Expect = 6.500e-39
Identity = 85/86 (98.84%), Postives = 85/86 (98.84%), Query Frame = 1 

		  

Query: 53  RRTTAKAFAKDVFINQERKLGARRRSDTVLVSTINDADQGSADVTFRTPPAPYEKSKFLG 112
           RRTTAKAFAKDVFINQERKLGARRRSDTVLVSTINDADQGSADV FRTPPAPYEKSKFLG
Sbjct: 236 RRTTAKAFAKDVFINQERKLGARRRSDTVLVSTINDADQGSADVAFRTPPAPYEKSKFLG 295

Query: 113 SGGSMVARLKLKGIDGRAPPGVEPAA 139
           SGGSMVARLKLKGIDGRAPPGVEPAA
Sbjct: 296 SGGSMVARLKLKGIDGRAPPGVEPAA 321
[Close]
BLAST of Spo19206.1 vs. UniProtKB/TrEMBL
Match: M1DMU8_SOLTU (Uncharacterized protein OS=Solanum tuberosum GN=PGSC0003DMG400041108 PE=4 SV=1)

HSP 1 Score: 168.3 bits (425), Expect = 6.500e-39
Identity = 86/92 (93.48%), Postives = 87/92 (94.57%), Query Frame = 1 

		  

Query: 47  PSRLFRRRTTAKAFAKDVFINQERKLGARRRSDTVLVSTINDADQGSADVTFRTPPAPYE 106
           P R +  RTTAKAFAKDVFINQERKLGARRRSDTVLVSTINDADQGSADV FRTPPAPYE
Sbjct: 48  PHRPWLVRTTAKAFAKDVFINQERKLGARRRSDTVLVSTINDADQGSADVAFRTPPAPYE 107

Query: 107 KSKFLGSGGSMVARLKLKGIDGRAPPGVEPAA 139
           KSKFLGSGGSMVARLKLKGIDGRAPPGVEPAA
Sbjct: 108 KSKFLGSGGSMVARLKLKGIDGRAPPGVEPAA 139
[Close]
BLAST of Spo19206.1 vs. UniProtKB/TrEMBL
Match: W9SJ11_9ROSA (Uncharacterized protein OS=Morus notabilis GN=L484_002552 PE=4 SV=1)

HSP 1 Score: 164.5 bits (415), Expect = 9.400e-38
Identity = 84/86 (97.67%), Postives = 84/86 (97.67%), Query Frame = 1 

		  

Query: 53  RRTTAKAFAKDVFINQERKLGARRRSDTVLVSTINDADQGSADVTFRTPPAPYEKSKFLG 112
           RRTTAKAFAKDVFINQERKLGARRRSDTVLVSTINDADQGSADV FRTP APYEKSKFLG
Sbjct: 107 RRTTAKAFAKDVFINQERKLGARRRSDTVLVSTINDADQGSADVAFRTPLAPYEKSKFLG 166

Query: 113 SGGSMVARLKLKGIDGRAPPGVEPAA 139
           SGGSMVARLKLKGIDGRAPPGVEPAA
Sbjct: 167 SGGSMVARLKLKGIDGRAPPGVEPAA 192
The following BLAST results are available for this feature:
BLAST of Spo19206.1 vs. NCBI nr
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. NCBI nr)
Total hits: 5
Match NameE-valueIdentityDescription
gi|922327215|ref|XP_013443000.1|4.9e-4068.0rRNA intron-encoded homing end... [more]
gi|694380941|ref|XP_009366572.1|1.2e-3869.7PREDICTED: uncharacterized pro... [more]
gi|1009176457|ref|XP_015869441.1|2.1e-3897.6PREDICTED: uncharacterized pro... [more]
gi|703137890|ref|XP_010106597.1|1.3e-3797.6hypothetical protein L484_0025... [more]
gi|686983426|gb|AIQ78384.1|1.8e-3796.5rRNA intron-encoded homing end... [more]
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BLAST of Spo19206.1 vs. UniProtKB/TrEMBL
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. UniprotKB/TrEMBL)
Total hits: 5
Match NameE-valueIdentityDescription
A0A072TTZ2_MEDTR3.4e-4068.0Uncharacterized protein OS=Med... [more]
M1DUP9_SOLTU6.5e-3998.8Uncharacterized protein OS=Sol... [more]
M1D925_SOLTU6.5e-3998.8Uncharacterized protein OS=Sol... [more]
M1DMU8_SOLTU6.5e-3993.4Uncharacterized protein OS=Sol... [more]
W9SJ11_9ROSA9.4e-3897.6Uncharacterized protein OS=Mor... [more]
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BLAST of Spo19206.1 vs. ExPASy Swiss-Prot
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. ExPASy SwissProt)
Total hits: 0
Match NameE-valueIdentityDescription
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BLAST of Spo19206.1 vs. TAIR (Arabidopsis)
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. TAIR)
Total hits: 0
Match NameE-valueIdentityDescription
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InterPro
Analysis Name: InterPro Annotations of S. oleracea
Date Performed: 2018-06-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePANTHERPTHR34410FAMILY NOT NAMEDcoord: 51..138
score: 4.6

GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0006506 GPI anchor biosynthetic process
biological_process GO:0043248 proteasome assembly
biological_process GO:0031348 negative regulation of defense response
biological_process GO:0043069 negative regulation of programmed cell death
biological_process GO:0006612 protein targeting to membrane
biological_process GO:0006979 response to oxidative stress
biological_process GO:0006096 glycolytic process
biological_process GO:0009060 aerobic respiration
biological_process GO:0010310 regulation of hydrogen peroxide metabolic process
biological_process GO:0010363 regulation of plant-type hypersensitive response
biological_process GO:0006511 ubiquitin-dependent protein catabolic process
biological_process GO:0010337 regulation of salicylic acid metabolic process
biological_process GO:0006810 transport
biological_process GO:0002679 respiratory burst involved in defense response
biological_process GO:0010200 response to chitin
biological_process GO:0009862 systemic acquired resistance, salicylic acid mediated signaling pathway
biological_process GO:0006850 mitochondrial pyruvate transmembrane transport
biological_process GO:0042254 ribosome biogenesis
biological_process GO:0005982 starch metabolic process
biological_process GO:0016049 cell growth
biological_process GO:0006206 pyrimidine nucleobase metabolic process
biological_process GO:0006351 transcription, DNA-templated
biological_process GO:0046777 protein autophosphorylation
biological_process GO:0009069 serine family amino acid metabolic process
biological_process GO:0005985 sucrose metabolic process
biological_process GO:0030001 metal ion transport
biological_process GO:0008152 metabolic process
biological_process GO:0042545 cell wall modification
biological_process GO:0009664 plant-type cell wall organization
biological_process GO:0006508 proteolysis
biological_process GO:0080167 response to karrikin
biological_process GO:0046686 response to cadmium ion
biological_process GO:0006301 postreplication repair
biological_process GO:0006354 DNA-templated transcription, elongation
biological_process GO:0006412 translation
biological_process GO:0016117 carotenoid biosynthetic process
biological_process GO:0009987 cellular process
biological_process GO:0016998 cell wall macromolecule catabolic process
biological_process GO:0000902 cell morphogenesis
biological_process GO:0007030 Golgi organization
biological_process GO:0048193 Golgi vesicle transport
biological_process GO:0006355 regulation of transcription, DNA-templated
biological_process GO:0006396 RNA processing
biological_process GO:0090503 RNA phosphodiester bond hydrolysis, exonucleolytic
biological_process GO:0007033 vacuole organization
biological_process GO:0080090 regulation of primary metabolic process
biological_process GO:0060255 regulation of macromolecule metabolic process
biological_process GO:0031323 regulation of cellular metabolic process
biological_process GO:0015031 protein transport
biological_process GO:0009657 plastid organization
biological_process GO:0034660 ncRNA metabolic process
biological_process GO:0044085 cellular component biogenesis
biological_process GO:0000165 MAPK cascade
biological_process GO:0042742 defense response to bacterium
biological_process GO:0009867 jasmonic acid mediated signaling pathway
biological_process GO:0080129 proteasome core complex assembly
biological_process GO:0009735 response to cytokinin
biological_process GO:0051788 response to misfolded protein
biological_process GO:0050832 defense response to fungus
biological_process GO:0001510 RNA methylation
biological_process GO:0052542 defense response by callose deposition
biological_process GO:0044262 cellular carbohydrate metabolic process
biological_process GO:0090305 nucleic acid phosphodiester bond hydrolysis
biological_process GO:0006857 oligopeptide transport
biological_process GO:0006446 regulation of translational initiation
biological_process GO:0010228 vegetative to reproductive phase transition of meristem
biological_process GO:0009058 biosynthetic process
biological_process GO:0005975 carbohydrate metabolic process
biological_process GO:0006465 signal peptide processing
biological_process GO:0006144 purine nucleobase metabolic process
biological_process GO:0019288 isopentenyl diphosphate biosynthetic process, methylerythritol 4-phosphate pathway
biological_process GO:0000338 protein deneddylation
biological_process GO:0055085 transmembrane transport
biological_process GO:0048829 root cap development
biological_process GO:0009651 response to salt stress
biological_process GO:0009408 response to heat
biological_process GO:0006499 N-terminal protein myristoylation
biological_process GO:0009640 photomorphogenesis
biological_process GO:0051604 protein maturation
biological_process GO:0090351 seedling development
biological_process GO:0051510 regulation of unidimensional cell growth
biological_process GO:0060968 regulation of gene silencing
biological_process GO:0043161 proteasome-mediated ubiquitin-dependent protein catabolic process
biological_process GO:0009933 meristem structural organization
biological_process GO:0035266 meristem growth
biological_process GO:0006544 glycine metabolic process
biological_process GO:0008643 carbohydrate transport
biological_process GO:0009853 photorespiration
biological_process GO:0016310 phosphorylation
biological_process GO:0006364 rRNA processing
biological_process GO:0044070 regulation of anion transport
biological_process GO:0009768 photosynthesis, light harvesting in photosystem I
biological_process GO:0018298 protein-chromophore linkage
biological_process GO:0010155 regulation of proton transport
biological_process GO:0009644 response to high light intensity
biological_process GO:0009744 response to sucrose
biological_process GO:0006744 ubiquinone biosynthetic process
biological_process GO:0055114 oxidation-reduction process
biological_process GO:0006571 tyrosine biosynthetic process
biological_process GO:0000162 tryptophan biosynthetic process
biological_process GO:0033587 shikimate biosynthetic process
biological_process GO:0009094 L-phenylalanine biosynthetic process
biological_process GO:0009423 chorismate biosynthetic process
biological_process GO:0009407 toxin catabolic process
biological_process GO:0006563 L-serine metabolic process
biological_process GO:0009089 lysine biosynthetic process via diaminopimelate
biological_process GO:0009088 threonine biosynthetic process
biological_process GO:0009765 photosynthesis, light harvesting
biological_process GO:0015991 ATP hydrolysis coupled proton transport
biological_process GO:0045892 negative regulation of transcription, DNA-templated
biological_process GO:0009932 cell tip growth
biological_process GO:0006635 fatty acid beta-oxidation
biological_process GO:0006605 protein targeting
biological_process GO:0006334 nucleosome assembly
biological_process GO:0006007 glucose catabolic process
biological_process GO:0042967 obsolete acyl-carrier-protein biosynthetic process
biological_process GO:0006897 endocytosis
biological_process GO:0016558 protein import into peroxisome matrix
biological_process GO:0006623 protein targeting to vacuole
biological_process GO:0010103 stomatal complex morphogenesis
biological_process GO:0016123 xanthophyll biosynthetic process
biological_process GO:0016120 carotene biosynthetic process
biological_process GO:0007292 female gamete generation
biological_process GO:0048232 male gamete generation
biological_process GO:0010078 maintenance of root meristem identity
biological_process GO:0009965 leaf morphogenesis
biological_process GO:0010311 lateral root formation
biological_process GO:0045087 innate immune response
biological_process GO:0006094 gluconeogenesis
biological_process GO:0009790 embryo development
biological_process GO:0051301 cell division
biological_process GO:0042023 DNA endoreduplication
biological_process GO:0043631 RNA polyadenylation
biological_process GO:0016567 protein ubiquitination
cellular_component GO:0005839 proteasome core complex
cellular_component GO:0009707 chloroplast outer membrane
cellular_component GO:0030659 cytoplasmic vesicle membrane
cellular_component GO:0005743 mitochondrial inner membrane
cellular_component GO:0017177 glucosidase II complex
cellular_component GO:0005768 endosome
cellular_component GO:0005802 trans-Golgi network
cellular_component GO:0005777 peroxisome
cellular_component GO:0000139 Golgi membrane
cellular_component GO:0005739 mitochondrion
cellular_component GO:0005741 mitochondrial outer membrane
cellular_component GO:0009506 plasmodesma
cellular_component GO:0000786 nucleosome
cellular_component GO:0005730 nucleolus
cellular_component GO:0005747 mitochondrial respiratory chain complex I
cellular_component GO:0005886 plasma membrane
cellular_component GO:0009505 plant-type cell wall
cellular_component GO:0016020 membrane
cellular_component GO:0005737 cytoplasm
cellular_component GO:0005634 nucleus
cellular_component GO:0000502 proteasome complex
cellular_component GO:0009570 chloroplast stroma
cellular_component GO:0005665 DNA-directed RNA polymerase II, core complex
cellular_component GO:0009523 photosystem II
cellular_component GO:0005774 vacuolar membrane
cellular_component GO:0033179 proton-transporting V-type ATPase, V0 domain
cellular_component GO:0009507 chloroplast
cellular_component GO:0005576 extracellular region
cellular_component GO:0005829 cytosol
cellular_component GO:0031410 cytoplasmic vesicle
cellular_component GO:0009524 phragmoplast
cellular_component GO:0031969 chloroplast membrane
cellular_component GO:0010287 plastoglobule
cellular_component GO:0009706 chloroplast inner membrane
cellular_component GO:0019773 proteasome core complex, alpha-subunit complex
cellular_component GO:0008540 proteasome regulatory particle, base subcomplex
cellular_component GO:0009522 photosystem I
cellular_component GO:0022627 cytosolic small ribosomal subunit
cellular_component GO:0032991 protein-containing complex
cellular_component GO:0042651 thylakoid membrane
cellular_component GO:0005618 cell wall
cellular_component GO:0005749 mitochondrial respiratory chain complex II, succinate dehydrogenase complex (ubiquinone)
cellular_component GO:0009941 chloroplast envelope
cellular_component GO:0005840 ribosome
cellular_component GO:0009535 chloroplast thylakoid membrane
cellular_component GO:0035145 exon-exon junction complex
cellular_component GO:0016021 integral component of membrane
cellular_component GO:0005759 mitochondrial matrix
cellular_component GO:0016604 nuclear body
molecular_function GO:0019706 protein-cysteine S-palmitoyltransferase activity
molecular_function GO:0000035 acyl binding
molecular_function GO:0004652 polynucleotide adenylyltransferase activity
molecular_function GO:0004519 endonuclease activity
molecular_function GO:0016758 transferase activity, transferring hexosyl groups
molecular_function GO:0005524 ATP binding
molecular_function GO:0003856 3-dehydroquinate synthase activity
molecular_function GO:0051287 NAD binding
molecular_function GO:0004072 aspartate kinase activity
molecular_function GO:0016597 amino acid binding
molecular_function GO:0042802 identical protein binding
molecular_function GO:0005515 protein binding
molecular_function GO:0003950 NAD+ ADP-ribosyltransferase activity
molecular_function GO:0005351 carbohydrate:proton symporter activity
molecular_function GO:0045435 lycopene epsilon cyclase activity
molecular_function GO:0046872 metal ion binding
molecular_function GO:0008568 microtubule-severing ATPase activity
molecular_function GO:0016168 chlorophyll binding
molecular_function GO:0003723 RNA binding
molecular_function GO:0020037 heme binding
molecular_function GO:0016705 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen
molecular_function GO:0004298 threonine-type endopeptidase activity
molecular_function GO:0042626 ATPase activity, coupled to transmembrane movement of substances
molecular_function GO:0008236 serine-type peptidase activity
molecular_function GO:0000062 fatty-acyl-CoA binding
molecular_function GO:0016874 ligase activity
molecular_function GO:0008270 zinc ion binding
molecular_function GO:0008233 peptidase activity
molecular_function GO:0004601 peroxidase activity
molecular_function GO:0004386 helicase activity
molecular_function GO:0051920 peroxiredoxin activity
molecular_function GO:0003735 structural constituent of ribosome
molecular_function GO:0005215 transporter activity
molecular_function GO:0003743 translation initiation factor activity
molecular_function GO:0016740 transferase activity
molecular_function GO:0004535 poly(A)-specific ribonuclease activity
molecular_function GO:0035673 oligopeptide transmembrane transporter activity
molecular_function GO:0003676 nucleic acid binding
molecular_function GO:0004190 aspartic-type endopeptidase activity
molecular_function GO:0005525 GTP binding
molecular_function GO:0009055 electron transfer activity
molecular_function GO:0003677 DNA binding
molecular_function GO:0016491 oxidoreductase activity
molecular_function GO:0010181 FMN binding
molecular_function GO:0046982 protein heterodimerization activity
molecular_function GO:0047617 acyl-CoA hydrolase activity
molecular_function GO:0005506 iron ion binding
molecular_function GO:0000166 nucleotide binding
molecular_function GO:0070330 aromatase activity
molecular_function GO:0004683 calmodulin-dependent protein kinase activity
molecular_function GO:0015078 proton transmembrane transporter activity
molecular_function GO:0016757 transferase activity, transferring glycosyl groups
molecular_function GO:0004575 sucrose alpha-glucosidase activity
molecular_function GO:0033926 glycopeptide alpha-N-acetylgalactosaminidase activity
molecular_function GO:0003899 DNA-directed 5'-3' RNA polymerase activity
molecular_function GO:0005509 calcium ion binding
molecular_function GO:0005516 calmodulin binding
molecular_function GO:0008308 voltage-gated anion channel activity
RNA-Seq Expression
   



Co-expression
Gener valueExpression
Spo146870.95Barchart | Table
Spo246250.95Barchart | Table
Spo122530.95Barchart | Table
Spo008980.95Barchart | Table
Spo009360.95Barchart | Table
Spo050290.95Barchart | Table
Spo036180.93Barchart | Table
Spo141940.89Barchart | Table
Spo134590.78Barchart | Table
Spo144410.76Barchart | Table
Spo122020.75Barchart | Table
Spo200710.74Barchart | Table
Spo069620.74Barchart | Table
Spo057310.73Barchart | Table
Spo140080.73Barchart | Table
Spo129420.73Barchart | Table
Spo059900.73Barchart | Table
Spo271020.73Barchart | Table
Spo049230.73Barchart | Table
Spo096740.73Barchart | Table
Spo019140.72Barchart | Table
Spo216910.72Barchart | Table
Spo206770.72Barchart | Table
Spo020850.71Barchart | Table
Spo036080.71Barchart | Table
Spo117330.71Barchart | Table
Spo126630.71Barchart | Table
Spo019290.70Barchart | Table
Spo198740.70Barchart | Table
Spo121280.70Barchart | Table
Spo148490.70Barchart | Table
Spo248570.70Barchart | Table
Spo185750.70Barchart | Table
Spo227600.70Barchart | Table
Spo027310.69Barchart | Table
Spo006150.69Barchart | Table
Spo121760.69Barchart | Table
Spo062940.69Barchart | Table
Spo001750.69Barchart | Table
Spo231480.69Barchart | Table
Spo012610.69Barchart | Table
Spo130290.69Barchart | Table
Spo173710.68Barchart | Table
Spo185020.68Barchart | Table
Spo085400.68Barchart | Table
Spo012040.68Barchart | Table
Spo060300.68Barchart | Table
Spo025940.68Barchart | Table
Spo139560.68Barchart | Table
Spo066810.68Barchart | Table
Spo168210.68Barchart | Table
Spo066790.67Barchart | Table
Spo042540.67Barchart | Table
Spo089690.67Barchart | Table
Spo156030.67Barchart | Table
Spo085720.67Barchart | Table
Spo021070.67Barchart | Table
Spo209570.67Barchart | Table
Spo068050.67Barchart | Table
Spo197510.67Barchart | Table
Spo184590.67Barchart | Table
Spo239080.67Barchart | Table
Spo169450.67Barchart | Table
Spo184510.67Barchart | Table
Spo033060.67Barchart | Table
Spo154200.67Barchart | Table
Spo252300.67Barchart | Table
Spo061990.67Barchart | Table
Spo098030.67Barchart | Table
Spo035610.67Barchart | Table
Spo052280.67Barchart | Table
Spo055310.66Barchart | Table
Spo090150.66Barchart | Table
Spo032510.66Barchart | Table
Spo102220.66Barchart | Table
Spo113460.66Barchart | Table
Spo267450.66Barchart | Table
Spo122010.66Barchart | Table
Spo031960.66Barchart | Table
Spo018580.66Barchart | Table
Spo155170.66Barchart | Table
Spo173720.66Barchart | Table
Spo177240.66Barchart | Table
Spo012310.66Barchart | Table
Spo010970.66Barchart | Table
Spo008580.66Barchart | Table
Spo181850.65Barchart | Table
Spo235490.65Barchart | Table
Spo237100.65Barchart | Table
Spo144380.65Barchart | Table
Spo243090.65Barchart | Table
Spo055350.65Barchart | Table
Spo135790.65Barchart | Table
Spo249850.65Barchart | Table
Spo067290.65Barchart | Table
Spo063140.65Barchart | Table
Spo195580.65Barchart | Table