Spo22061 (gene) | SpinachBase

Overview


Name	Spo22061
Type	gene
Organism	Spinacia oleracea (Spinach)
Description	COP1-interacting-like protein
Location	SpoScf_33010 : 134 .. 803 (+)

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

CCTACCAGCAACCAATCAGAGGAAGATGCATCTACCGTACATGAGAATTCGAAGTAAGCATTTCAGTGGTTGCACTAAGCTTCAAAAAAGTATTAGCATTTCAAATCTAATAGTTGAAATGCTTGATCAGAGTCCAACTTATACAAGTTCTCGAGACACGTAAAACTATGCTACAAAAAGAGCAAGGCATGGCTTTTGCACGTGCTGTTGCTGCTAGCTTTGACATTGATAACATAGACGATCTGCTTGCTTTTGCTGAATGTTTTGGGGCTTCACGTATGATGTAAGCTGCATTCTTTCAAACAGTTCTAGTATGCTGTATGTAGGTTAAGCATATTTCTTTTTTCGAATGACTTTTGTGGCACACTGGCACTTTGTATTTGAAGGGAACTGTGTTTCTCATTAATTATTTTCATGTCATAGGGATGCGTGCAAAAAGTTTTTGGACTTATGGAAGGCAAAGCATGAAAGTGGTCAGTGGGTTGAGGTTGAAGCAGCCGATGCAGTGTCTTGCCGGTCAGACATGCCTAGTACAAATGCAGCAGGTATTGTGTTTCTGGGCCCAAGCGAACAGAAGGAATTCAAGGAATCAAGCCCCCAGGGTGAGATTGGTTCTGAAAAGAAGGGGATGTCATGTGCGCCTAGTCCAGGTGCCACTCTAACATTATGA

mRNA sequence

CCTACCAGCAACCAATCAGAGGAAGATGCATCTACCGTACATGAGAATTCGAAAGTCCAACTTATACAAGTTCTCGAGACACGTAAAACTATGCTACAAAAAGAGCAAGGCATGGCTTTTGCACGTGCTGTTGCTGCTAGCTTTGACATTGATAACATAGACGATCTGCTTGCTTTTGCTGAATGTTTTGGGGCTTCACGTATGATGGATGCGTGCAAAAAGTTTTTGGACTTATGGAAGGCAAAGCATGAAAGTGGTCAGTGGGTTGAGGTTGAAGCAGCCGATGCAGTGTCTTGCCGGTCAGACATGCCTAGTACAAATGCAGCAGGTATTGTGTTTCTGGGCCCAAGCGAACAGAAGGAATTCAAGGAATCAAGCCCCCAGGGTGAGATTGGTTCTGAAAAGAAGGGGATGTCATGTGCGCCTAGTCCAGGTGCCACTCTAACATTATGA

Coding sequence (CDS)

CCTACCAGCAACCAATCAGAGGAAGATGCATCTACCGTACATGAGAATTCGAAAGTCCAACTTATACAAGTTCTCGAGACACGTAAAACTATGCTACAAAAAGAGCAAGGCATGGCTTTTGCACGTGCTGTTGCTGCTAGCTTTGACATTGATAACATAGACGATCTGCTTGCTTTTGCTGAATGTTTTGGGGCTTCACGTATGATGGATGCGTGCAAAAAGTTTTTGGACTTATGGAAGGCAAAGCATGAAAGTGGTCAGTGGGTTGAGGTTGAAGCAGCCGATGCAGTGTCTTGCCGGTCAGACATGCCTAGTACAAATGCAGCAGGTATTGTGTTTCTGGGCCCAAGCGAACAGAAGGAATTCAAGGAATCAAGCCCCCAGGGTGAGATTGGTTCTGAAAAGAAGGGGATGTCATGTGCGCCTAGTCCAGGTGCCACTCTAACATTATGA

Protein sequence

PTSNQSEEDASTVHENSKVQLIQVLETRKTMLQKEQGMAFARAVAASFDIDNIDDLLAFAECFGASRMMDACKKFLDLWKAKHESGQWVEVEAADAVSCRSDMPSTNAAGIVFLGPSEQKEFKESSPQGEIGSEKKGMSCAPSPGATLTL

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Spo22061.1	Spo22061.1	mRNA

Homology

[Close]

BLAST of Spo22061.1 vs. NCBI nr
Match: gi|902195803|gb|KNA12956.1| (hypothetical protein SOVF_121570 [Spinacia oleracea])

HSP 1 Score: 283.1 bits (723), Expect = 2.800e-73
Identity = 144/144 (100.00%), Postives = 144/144 (100.00%), Query Frame = 1


		  
Query: 1   PTSNQSEEDASTVHENSKVQLIQVLETRKTMLQKEQGMAFARAVAASFDIDNIDDLLAFA 60
           PTSNQSEEDASTVHENSKVQLIQVLETRKTMLQKEQGMAFARAVAASFDIDNIDDLLAFA
Sbjct: 155 PTSNQSEEDASTVHENSKVQLIQVLETRKTMLQKEQGMAFARAVAASFDIDNIDDLLAFA 214

Query: 61  ECFGASRMMDACKKFLDLWKAKHESGQWVEVEAADAVSCRSDMPSTNAAGIVFLGPSEQK 120
           ECFGASRMMDACKKFLDLWKAKHESGQWVEVEAADAVSCRSDMPSTNAAGIVFLGPSEQK
Sbjct: 215 ECFGASRMMDACKKFLDLWKAKHESGQWVEVEAADAVSCRSDMPSTNAAGIVFLGPSEQK 274

Query: 121 EFKESSPQGEIGSEKKGMSCAPSP 145
           EFKESSPQGEIGSEKKGMSCAPSP
Sbjct: 275 EFKESSPQGEIGSEKKGMSCAPSP 298

[Close]

BLAST of Spo22061.1 vs. NCBI nr
Match: gi|731320805|ref|XP_010671008.1| (PREDICTED: uncharacterized protein LOC104887920 isoform X2 [Beta vulgaris subsp. vulgaris])

HSP 1 Score: 225.3 bits (573), Expect = 7.000e-56
Identity = 117/143 (81.82%), Postives = 129/143 (90.21%), Query Frame = 1


		  
Query: 1   PTSNQSEEDAST--VHENSKVQLIQVLETRKTMLQKEQGMAFARAVAASFDIDNIDDLLA 60
           P SNQSEEDAST  + ++SKVQL+QVLETRKT+LQKEQGMAFARAVAA FDIDNI  LLA
Sbjct: 152 PASNQSEEDASTTTLEKSSKVQLVQVLETRKTVLQKEQGMAFARAVAAGFDIDNIAALLA 211

Query: 61  FAECFGASRMMDACKKFLDLWKAKHESGQWVEVEAADAVSCRSDMPSTNAAGIVFLGPSE 120
           FAE FGASR++DACKKFLDLWKAKHESGQWVEVEA +A+SCRSD+PSTNAAGIVFL PSE
Sbjct: 212 FAERFGASRLIDACKKFLDLWKAKHESGQWVEVEATEAMSCRSDLPSTNAAGIVFLNPSE 271

Query: 121 QKEFKESSPQGEIGSEKKGMSCA 142
           Q++FKES PQGE  SEKKG SCA
Sbjct: 272 QRDFKESCPQGESPSEKKGTSCA 294

[Close]

BLAST of Spo22061.1 vs. NCBI nr
Match: gi|731320803|ref|XP_010671007.1| (PREDICTED: uncharacterized protein LOC104887920 isoform X1 [Beta vulgaris subsp. vulgaris])

HSP 1 Score: 225.3 bits (573), Expect = 7.000e-56
Identity = 117/143 (81.82%), Postives = 129/143 (90.21%), Query Frame = 1


		  
Query: 1   PTSNQSEEDAST--VHENSKVQLIQVLETRKTMLQKEQGMAFARAVAASFDIDNIDDLLA 60
           P SNQSEEDAST  + ++SKVQL+QVLETRKT+LQKEQGMAFARAVAA FDIDNI  LLA
Sbjct: 152 PASNQSEEDASTTTLEKSSKVQLVQVLETRKTVLQKEQGMAFARAVAAGFDIDNIAALLA 211

Query: 61  FAECFGASRMMDACKKFLDLWKAKHESGQWVEVEAADAVSCRSDMPSTNAAGIVFLGPSE 120
           FAE FGASR++DACKKFLDLWKAKHESGQWVEVEA +A+SCRSD+PSTNAAGIVFL PSE
Sbjct: 212 FAERFGASRLIDACKKFLDLWKAKHESGQWVEVEATEAMSCRSDLPSTNAAGIVFLNPSE 271

Query: 121 QKEFKESSPQGEIGSEKKGMSCA 142
           Q++FKES PQGE  SEKKG SCA
Sbjct: 272 QRDFKESCPQGESPSEKKGTSCA 294

[Close]

BLAST of Spo22061.1 vs. NCBI nr
Match: gi|147853133|emb|CAN80688.1| (hypothetical protein VITISV_021551 [Vitis vinifera])

HSP 1 Score: 162.2 bits (409), Expect = 7.300e-37
Identity = 87/141 (61.70%), Postives = 111/141 (78.72%), Query Frame = 1


		  
Query: 1   PTSNQSEEDASTVHE-NSKVQLIQVLETRKTMLQKEQGMAFARAVAASFDIDNIDDLLAF 60
           P ++  E + ST  E NSKVQL++VLETRKT+LQKEQGMAFARAVAA FDID++  LL+F
Sbjct: 159 PGAHPPEANGSTTQEGNSKVQLLKVLETRKTVLQKEQGMAFARAVAAGFDIDHMTPLLSF 218

Query: 61  AECFGASRMMDACKKFLDLWKAKHESGQWVEVEAADAVSCRSDMPSTNAAGIVFLG-PSE 120
           AECFGASR+MDAC +FLDLWK+KHE+GQW+E+EAA+A+S +SD  S N +GI      ++
Sbjct: 219 AECFGASRLMDACLRFLDLWKSKHETGQWLEIEAAEAMSSQSDFSSMNPSGITLSNMVNK 278

Query: 121 QKEFKESSPQ--GEIGSEKKG 138
           QKEFKE+ P+   E+ SE  G
Sbjct: 279 QKEFKEAWPESLSELASENNG 299

[Close]

BLAST of Spo22061.1 vs. NCBI nr
Match: gi|296083674|emb|CBI23663.3| (unnamed protein product [Vitis vinifera])

HSP 1 Score: 161.0 bits (406), Expect = 1.600e-36
Identity = 86/141 (60.99%), Postives = 111/141 (78.72%), Query Frame = 1


		  
Query: 1   PTSNQSEEDASTVHE-NSKVQLIQVLETRKTMLQKEQGMAFARAVAASFDIDNIDDLLAF 60
           P ++  E + ST  E NSKVQL++VLETRKT+LQKEQGMAFARAVAA FDID++  LL+F
Sbjct: 152 PGAHPPEANGSTTQEGNSKVQLLKVLETRKTVLQKEQGMAFARAVAAGFDIDHMTPLLSF 211

Query: 61  AECFGASRMMDACKKFLDLWKAKHESGQWVEVEAADAVSCRSDMPSTNAAGIVFLG-PSE 120
           AECFGASR+MDAC +FLDLWK+KHE+GQW+E+EAA+A+S +SD  S N +GI      ++
Sbjct: 212 AECFGASRLMDACLRFLDLWKSKHETGQWLEIEAAEAMSSQSDFSSMNPSGITLSNMVNK 271

Query: 121 QKEFKESSPQ--GEIGSEKKG 138
           QKEF+E+ P+   E+ SE  G
Sbjct: 272 QKEFREAWPESLSELASENNG 292

[Close]

BLAST of Spo22061.1 vs. UniProtKB/TrEMBL
Match: A0A0K9R0B1_SPIOL (Uncharacterized protein OS=Spinacia oleracea GN=SOVF_121570 PE=4 SV=1)

HSP 1 Score: 283.1 bits (723), Expect = 2.000e-73
Identity = 144/144 (100.00%), Postives = 144/144 (100.00%), Query Frame = 1


		  
Query: 1   PTSNQSEEDASTVHENSKVQLIQVLETRKTMLQKEQGMAFARAVAASFDIDNIDDLLAFA 60
           PTSNQSEEDASTVHENSKVQLIQVLETRKTMLQKEQGMAFARAVAASFDIDNIDDLLAFA
Sbjct: 155 PTSNQSEEDASTVHENSKVQLIQVLETRKTMLQKEQGMAFARAVAASFDIDNIDDLLAFA 214

Query: 61  ECFGASRMMDACKKFLDLWKAKHESGQWVEVEAADAVSCRSDMPSTNAAGIVFLGPSEQK 120
           ECFGASRMMDACKKFLDLWKAKHESGQWVEVEAADAVSCRSDMPSTNAAGIVFLGPSEQK
Sbjct: 215 ECFGASRMMDACKKFLDLWKAKHESGQWVEVEAADAVSCRSDMPSTNAAGIVFLGPSEQK 274

Query: 121 EFKESSPQGEIGSEKKGMSCAPSP 145
           EFKESSPQGEIGSEKKGMSCAPSP
Sbjct: 275 EFKESSPQGEIGSEKKGMSCAPSP 298

[Close]

BLAST of Spo22061.1 vs. UniProtKB/TrEMBL
Match: A0A0J8CWX7_BETVU (Uncharacterized protein OS=Beta vulgaris subsp. vulgaris GN=BVRB_3g048820 PE=4 SV=1)

HSP 1 Score: 225.3 bits (573), Expect = 4.900e-56
Identity = 117/143 (81.82%), Postives = 129/143 (90.21%), Query Frame = 1


		  
Query: 1   PTSNQSEEDAST--VHENSKVQLIQVLETRKTMLQKEQGMAFARAVAASFDIDNIDDLLA 60
           P SNQSEEDAST  + ++SKVQL+QVLETRKT+LQKEQGMAFARAVAA FDIDNI  LLA
Sbjct: 152 PASNQSEEDASTTTLEKSSKVQLVQVLETRKTVLQKEQGMAFARAVAAGFDIDNIAALLA 211

Query: 61  FAECFGASRMMDACKKFLDLWKAKHESGQWVEVEAADAVSCRSDMPSTNAAGIVFLGPSE 120
           FAE FGASR++DACKKFLDLWKAKHESGQWVEVEA +A+SCRSD+PSTNAAGIVFL PSE
Sbjct: 212 FAERFGASRLIDACKKFLDLWKAKHESGQWVEVEATEAMSCRSDLPSTNAAGIVFLNPSE 271

Query: 121 QKEFKESSPQGEIGSEKKGMSCA 142
           Q++FKES PQGE  SEKKG SCA
Sbjct: 272 QRDFKESCPQGESPSEKKGTSCA 294

[Close]

BLAST of Spo22061.1 vs. UniProtKB/TrEMBL
Match: A0A0J8CS66_BETVU (Uncharacterized protein OS=Beta vulgaris subsp. vulgaris GN=BVRB_3g048820 PE=4 SV=1)

HSP 1 Score: 225.3 bits (573), Expect = 4.900e-56
Identity = 117/143 (81.82%), Postives = 129/143 (90.21%), Query Frame = 1


		  
Query: 1   PTSNQSEEDAST--VHENSKVQLIQVLETRKTMLQKEQGMAFARAVAASFDIDNIDDLLA 60
           P SNQSEEDAST  + ++SKVQL+QVLETRKT+LQKEQGMAFARAVAA FDIDNI  LLA
Sbjct: 152 PASNQSEEDASTTTLEKSSKVQLVQVLETRKTVLQKEQGMAFARAVAAGFDIDNIAALLA 211

Query: 61  FAECFGASRMMDACKKFLDLWKAKHESGQWVEVEAADAVSCRSDMPSTNAAGIVFLGPSE 120
           FAE FGASR++DACKKFLDLWKAKHESGQWVEVEA +A+SCRSD+PSTNAAGIVFL PSE
Sbjct: 212 FAERFGASRLIDACKKFLDLWKAKHESGQWVEVEATEAMSCRSDLPSTNAAGIVFLNPSE 271

Query: 121 QKEFKESSPQGEIGSEKKGMSCA 142
           Q++FKES PQGE  SEKKG SCA
Sbjct: 272 QRDFKESCPQGESPSEKKGTSCA 294

[Close]

BLAST of Spo22061.1 vs. UniProtKB/TrEMBL
Match: A5B1U9_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_021551 PE=4 SV=1)

HSP 1 Score: 162.2 bits (409), Expect = 5.100e-37
Identity = 87/141 (61.70%), Postives = 111/141 (78.72%), Query Frame = 1


		  
Query: 1   PTSNQSEEDASTVHE-NSKVQLIQVLETRKTMLQKEQGMAFARAVAASFDIDNIDDLLAF 60
           P ++  E + ST  E NSKVQL++VLETRKT+LQKEQGMAFARAVAA FDID++  LL+F
Sbjct: 159 PGAHPPEANGSTTQEGNSKVQLLKVLETRKTVLQKEQGMAFARAVAAGFDIDHMTPLLSF 218

Query: 61  AECFGASRMMDACKKFLDLWKAKHESGQWVEVEAADAVSCRSDMPSTNAAGIVFLG-PSE 120
           AECFGASR+MDAC +FLDLWK+KHE+GQW+E+EAA+A+S +SD  S N +GI      ++
Sbjct: 219 AECFGASRLMDACLRFLDLWKSKHETGQWLEIEAAEAMSSQSDFSSMNPSGITLSNMVNK 278

Query: 121 QKEFKESSPQ--GEIGSEKKG 138
           QKEFKE+ P+   E+ SE  G
Sbjct: 279 QKEFKEAWPESLSELASENNG 299

[Close]

BLAST of Spo22061.1 vs. UniProtKB/TrEMBL
Match: F6H8R3_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_05s0049g01280 PE=4 SV=1)

HSP 1 Score: 161.0 bits (406), Expect = 1.100e-36
Identity = 86/141 (60.99%), Postives = 111/141 (78.72%), Query Frame = 1


		  
Query: 1   PTSNQSEEDASTVHE-NSKVQLIQVLETRKTMLQKEQGMAFARAVAASFDIDNIDDLLAF 60
           P ++  E + ST  E NSKVQL++VLETRKT+LQKEQGMAFARAVAA FDID++  LL+F
Sbjct: 152 PGAHPPEANGSTTQEGNSKVQLLKVLETRKTVLQKEQGMAFARAVAAGFDIDHMTPLLSF 211

Query: 61  AECFGASRMMDACKKFLDLWKAKHESGQWVEVEAADAVSCRSDMPSTNAAGIVFLG-PSE 120
           AECFGASR+MDAC +FLDLWK+KHE+GQW+E+EAA+A+S +SD  S N +GI      ++
Sbjct: 212 AECFGASRLMDACLRFLDLWKSKHETGQWLEIEAAEAMSSQSDFSSMNPSGITLSNMVNK 271

Query: 121 QKEFKESSPQ--GEIGSEKKG 138
           QKEF+E+ P+   E+ SE  G
Sbjct: 272 QKEFREAWPESLSELASENNG 292

[Close]

BLAST of Spo22061.1 vs. TAIR (Arabidopsis)
Match: AT5G43310.1 (COP1-interacting protein-related)

HSP 1 Score: 124.8 bits (312), Expect = 4.500e-29
Identity = 59/109 (54.13%), Postives = 84/109 (77.06%), Query Frame = 1


		  
Query: 18  KVQLIQVLETRKTMLQKEQGMAFARAVAASFDIDNIDDLLAFAECFGASRMMDACKKFLD 77
           + Q+++VLETRK MLQKEQGMAFARAVAA F+ D++  L++FA+ FGASR+MDAC KF+D
Sbjct: 228 RAQVMKVLETRKIMLQKEQGMAFARAVAAGFEADDMIPLISFAKTFGASRLMDACVKFMD 287

Query: 78  LWKAKHESGQWVEVEAADAVSCRSDMPSTNAAGIVFLGPSEQKEFKESS 127
           LWK KHE+GQWVE+EA + ++ + ++ + N +GI+F   +      E+S
Sbjct: 288 LWKKKHETGQWVEIEATEVMATQPNISTMNDSGIMFANAANMPGTPENS 336

[Close]

BLAST of Spo22061.1 vs. TAIR (Arabidopsis)
Match: AT1G61100.1 (disease resistance protein (TIR class), putative)

HSP 1 Score: 97.4 bits (241), Expect = 7.700e-21
Identity = 50/113 (44.25%), Postives = 75/113 (66.37%), Query Frame = 1


		  
Query: 2   TSNQSEEDASTV--HENSKVQLIQVLETRKTMLQKEQGMAFARAVAASFDIDNIDDLLAF 61
           +S +  E+ + V   E SK+QL ++LETR+T+L++EQ MA+AR V A ++ID+IDDL+ F
Sbjct: 139 SSKKESENGNEVVGEETSKIQLQRLLETRRTLLRREQAMAYARGVVAGYEIDSIDDLILF 198

Query: 62  AECFGASRMMDACKKFLDLWKAKHESGQWVEVEAADAVSCRSDMPSTNAAGIV 113
           A+ FGASR+ +AC  + +LWK KH  G W+   AA       DM    ++GI+
Sbjct: 199 ADAFGASRLREACIMYKELWKKKHGDGLWMAELAAVKACAPVDMSLLGSSGII 251

[Close]

BLAST of Spo22061.1 vs. TAIR (Arabidopsis)
Match: AT4G27430.1 (COP1-interacting protein 7)

HSP 1 Score: 95.1 bits (235), Expect = 3.800e-20
Identity = 60/154 (38.96%), Postives = 82/154 (53.25%), Query Frame = 1


		  
Query: 2   TSNQSEEDASTVHENSKVQLIQVLETRKTMLQKEQGMAFARAVAASFDIDNIDDLLAFAE 61
           +  + E D  TV ENSKV L +VLE RK  L KEQ MA+ARA+   F++D +DDL +FA+
Sbjct: 136 SKTKGETDGDTVEENSKVGLQRVLENRKAALCKEQAMAYARALVVGFELDYMDDLFSFAD 195

Query: 62  CFGASRMMDACKKFLDLWKAKHESGQWVEVEAADAVSCRSDMPSTNAAGIVFLGPS---- 121
            FGASR+ +AC  F+DL K K+E   WV+   A     R ++     +GIV  G      
Sbjct: 196 AFGASRLREACVNFVDLCKRKNEDRMWVDQITAMQAFPRPELTFMGDSGIVLAGEENDLL 255

Query: 122 -----EQKEFKESSPQG--EIGSEKKGMSCAPSP 145
                +     ++S QG  E G E +     P P
Sbjct: 256 NATNVKHGNSMDASSQGSFETGQEGRAQMAMPWP 289

The following BLAST results are available for this feature:

BLAST of Spo22061.1 vs. NCBI nr
BLAST of Spo22061.1 vs. UniProtKB/TrEMBL
BLAST of Spo22061.1 vs. ExPASy Swiss-Prot
BLAST of Spo22061.1 vs. TAIR (Arabidopsis)

BLAST of Spo22061.1 vs. NCBI nr
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. NCBI nr)
Total hits: 5


Match Name	E-value	Identity	Description
gi\|902195803\|gb\|KNA12956.1\|	2.8e-73	100.	hypothetical protein SOVF_1215...	[more]
gi\|731320805\|ref\|XP_010671008.1\|	7.0e-56	81.8	PREDICTED: uncharacterized pro...	[more]
gi\|731320803\|ref\|XP_010671007.1\|	7.0e-56	81.8	PREDICTED: uncharacterized pro...	[more]
gi\|147853133\|emb\|CAN80688.1\|	7.3e-37	61.7	hypothetical protein VITISV_02...	[more]
gi\|296083674\|emb\|CBI23663.3\|	1.6e-36	60.9	unnamed protein product [Vitis...	[more]

BLAST of Spo22061.1 vs. UniProtKB/TrEMBL
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. UniprotKB/TrEMBL)
Total hits: 5


Match Name	E-value	Identity	Description
A0A0K9R0B1_SPIOL	2.0e-73	100.	Uncharacterized protein OS=Spi...	[more]
A0A0J8CWX7_BETVU	4.9e-56	81.8	Uncharacterized protein OS=Bet...	[more]
A0A0J8CS66_BETVU	4.9e-56	81.8	Uncharacterized protein OS=Bet...	[more]
A5B1U9_VITVI	5.1e-37	61.7	Putative uncharacterized prote...	[more]
F6H8R3_VITVI	1.1e-36	60.9	Putative uncharacterized prote...	[more]

BLAST of Spo22061.1 vs. ExPASy Swiss-Prot
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. ExPASy SwissProt)
Total hits: 0


Match Name	E-value	Identity	Description

BLAST of Spo22061.1 vs. TAIR (Arabidopsis)
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. TAIR)
Total hits: 3


Match Name	E-value	Identity	Description
AT5G43310.1	4.5e-29	54.1	COP1-interacting protein-relat...	[more]
AT1G61100.1	7.7e-21	44.2	disease resistance protein (TI...	[more]
AT4G27430.1	3.8e-20	38.9	COP1-interacting protein 7	[more]

InterPro

Analysis Name: InterPro Annotations of S. oleracea
Date Performed: 2018-06-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PANTHER	PTHR31008	COP1-INTERACTING PROTEIN-RELATED	coord: 7..128 score: 6.7
None	No IPR available	PANTHER	PTHR31008:SF0	COP1-INTERACTING PROTEIN-LIKE PROTEIN	coord: 7..128 score: 6.7

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0043069	negative regulation of programmed cell death
biological_process	GO:0044248	cellular catabolic process
biological_process	GO:0042742	defense response to bacterium
biological_process	GO:0050832	defense response to fungus
biological_process	GO:0006888	ER to Golgi vesicle-mediated transport
biological_process	GO:0009965	leaf morphogenesis
biological_process	GO:0010150	leaf senescence
biological_process	GO:0009556	microsporogenesis
biological_process	GO:0006862	nucleotide transport
biological_process	GO:0052544	defense response by callose deposition in cell wall
biological_process	GO:0006612	protein targeting to membrane
biological_process	GO:0008360	regulation of cell shape
biological_process	GO:0043269	regulation of ion transport
biological_process	GO:0010363	regulation of plant-type hypersensitive response
biological_process	GO:0005982	starch metabolic process
biological_process	GO:0005985	sucrose metabolic process
biological_process	GO:0048571	long-day photoperiodism
biological_process	GO:0009870	defense response signaling pathway, resistance gene-dependent
biological_process	GO:0015802	basic amino acid transport
biological_process	GO:0048825	cotyledon development
biological_process	GO:0015696	ammonium transport
biological_process	GO:0009987	cellular process
biological_process	GO:1901575	organic substance catabolic process
biological_process	GO:0042254	ribosome biogenesis
biological_process	GO:0016070	RNA metabolic process
biological_process	GO:0010182	sugar mediated signaling pathway
biological_process	GO:0009863	salicylic acid mediated signaling pathway
biological_process	GO:0016246	RNA interference
biological_process	GO:0030001	metal ion transport
biological_process	GO:0009611	response to wounding
biological_process	GO:0009744	response to sucrose
biological_process	GO:0000184	nuclear-transcribed mRNA catabolic process, nonsense-mediated decay
biological_process	GO:0006075	(1->3)-beta-D-glucan biosynthetic process
biological_process	GO:0043090	amino acid import
biological_process	GO:0009867	jasmonic acid mediated signaling pathway
cellular_component	GO:0005829	cytosol
cellular_component	GO:0000932	P-body
cellular_component	GO:0005886	plasma membrane
cellular_component	GO:0009506	plasmodesma
cellular_component	GO:0043231	intracellular membrane-bounded organelle
cellular_component	GO:0016021	integral component of membrane
cellular_component	GO:0005794	Golgi apparatus
cellular_component	GO:0000148	1,3-beta-D-glucan synthase complex
cellular_component	GO:0005737	cytoplasm
cellular_component	GO:0005618	cell wall
molecular_function	GO:0008270	zinc ion binding
molecular_function	GO:0003723	RNA binding
molecular_function	GO:0003677	DNA binding
molecular_function	GO:0005515	protein binding
molecular_function	GO:0005524	ATP binding
molecular_function	GO:0004386	helicase activity
molecular_function	GO:0003676	nucleic acid binding
molecular_function	GO:0003843	1,3-beta-D-glucan synthase activity
molecular_function	GO:0046872	metal ion binding
molecular_function	GO:0000166	nucleotide binding

RNA-Seq Expression

Co-expression


Gene	r value	Expression
Spo03573	0.72	Barchart \| Table
Spo09855	0.68	Barchart \| Table
Spo02099	0.67	Barchart \| Table
Spo19905	0.67	Barchart \| Table
Spo26726	0.67	Barchart \| Table
Spo09711	0.65	Barchart \| Table