Spo18003 (gene) | SpinachBase

Overview


Name	Spo18003
Type	gene
Organism	Spinacia oleracea (Spinach)
Description	DUF679 domain membrane protein
Location	Super_scaffold_101 : 37444 .. 38079 (+)

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGATGTCAGTGCAATCAACGAAGAAGCTCGAGAGATTGATGATGAGCAAAAGGTTCCTCTTCTCCAAGATATACCACCTTCTACAGTAGACAGAAATCCAATACAGCAAGCCATCAGCCAGACATTTCAGAGCACGGCTCACTTGGCCAATTTACTACCAACTGGAACAGTTATGGCCTTCCAGCTTCTCGCACCGGTTTTCACAAACCAAGGTGAATGTGACCCGGTCAGCAGAACGATTACTTCCATCCTAATTGCTTTTTGTGGGTTGTCATCTTTCCTACTAAGCTTCACTGACTGCTTCAAGGACAACGATGGGAATATCTACTACGGGTTCGCCACTTTCAACGGTCTGTGGGTCATAGATGGGTCAACAACAATTCCATCCCAACTTGCTGCTAAGTACCGTCTCCGGTTCATAGATTTTCTACATGCTTTCATGTCAGTATTCGTTTTTGCAGCAATTGCCTTATTTGATAAGAACACGGTTCAATGCTTCTATCCAACGCCATCAAAAGAGACCCAGGAGATTCTTACAGCACTACCTGTTGGAATAGGAGTCCTTTGCAGTATGCTGTTTGTAGCATTCCCTACACATCGCCATGGGATTGGTTTCCCCCTAACTGCAAATTGA

mRNA sequence

ATGGATGTCAGTGCAATCAACGAAGAAGCTCGAGAGATTGATGATGAGCAAAAGGTTCCTCTTCTCCAAGATATACCACCTTCTACAGTAGACAGAAATCCAATACAGCAAGCCATCAGCCAGACATTTCAGAGCACGGCTCACTTGGCCAATTTACTACCAACTGGAACAGTTATGGCCTTCCAGCTTCTCGCACCGGTTTTCACAAACCAAGGTGAATGTGACCCGGTCAGCAGAACGATTACTTCCATCCTAATTGCTTTTTGTGGGTTGTCATCTTTCCTACTAAGCTTCACTGACTGCTTCAAGGACAACGATGGGAATATCTACTACGGGTTCGCCACTTTCAACGGTCTGTGGGTCATAGATGGGTCAACAACAATTCCATCCCAACTTGCTGCTAAGTACCGTCTCCGGTTCATAGATTTTCTACATGCTTTCATGTCAGTATTCGTTTTTGCAGCAATTGCCTTATTTGATAAGAACACGGTTCAATGCTTCTATCCAACGCCATCAAAAGAGACCCAGGAGATTCTTACAGCACTACCTGTTGGAATAGGAGTCCTTTGCAGTATGCTGTTTGTAGCATTCCCTACACATCGCCATGGGATTGGTTTCCCCCTAACTGCAAATTGA

Coding sequence (CDS)

ATGGATGTCAGTGCAATCAACGAAGAAGCTCGAGAGATTGATGATGAGCAAAAGGTTCCTCTTCTCCAAGATATACCACCTTCTACAGTAGACAGAAATCCAATACAGCAAGCCATCAGCCAGACATTTCAGAGCACGGCTCACTTGGCCAATTTACTACCAACTGGAACAGTTATGGCCTTCCAGCTTCTCGCACCGGTTTTCACAAACCAAGGTGAATGTGACCCGGTCAGCAGAACGATTACTTCCATCCTAATTGCTTTTTGTGGGTTGTCATCTTTCCTACTAAGCTTCACTGACTGCTTCAAGGACAACGATGGGAATATCTACTACGGGTTCGCCACTTTCAACGGTCTGTGGGTCATAGATGGGTCAACAACAATTCCATCCCAACTTGCTGCTAAGTACCGTCTCCGGTTCATAGATTTTCTACATGCTTTCATGTCAGTATTCGTTTTTGCAGCAATTGCCTTATTTGATAAGAACACGGTTCAATGCTTCTATCCAACGCCATCAAAAGAGACCCAGGAGATTCTTACAGCACTACCTGTTGGAATAGGAGTCCTTTGCAGTATGCTGTTTGTAGCATTCCCTACACATCGCCATGGGATTGGTTTCCCCCTAACTGCAAATTGA

Protein sequence

MDVSAINEEAREIDDEQKVPLLQDIPPSTVDRNPIQQAISQTFQSTAHLANLLPTGTVMAFQLLAPVFTNQGECDPVSRTITSILIAFCGLSSFLLSFTDCFKDNDGNIYYGFATFNGLWVIDGSTTIPSQLAAKYRLRFIDFLHAFMSVFVFAAIALFDKNTVQCFYPTPSKETQEILTALPVGIGVLCSMLFVAFPTHRHGIGFPLTAN

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Spo18003.1	Spo18003.1	mRNA

Homology

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BLAST of Spo18003.1 vs. NCBI nr
Match: gi|902207109|gb|KNA15625.1| (hypothetical protein SOVF_096570 [Spinacia oleracea])

HSP 1 Score: 423.7 bits (1088), Expect = 1.900e-115
Identity = 211/211 (100.00%), Postives = 211/211 (100.00%), Query Frame = 1

		  
Query: 1   MDVSAINEEAREIDDEQKVPLLQDIPPSTVDRNPIQQAISQTFQSTAHLANLLPTGTVMA 60
           MDVSAINEEAREIDDEQKVPLLQDIPPSTVDRNPIQQAISQTFQSTAHLANLLPTGTVMA
Sbjct: 1   MDVSAINEEAREIDDEQKVPLLQDIPPSTVDRNPIQQAISQTFQSTAHLANLLPTGTVMA 60

Query: 61  FQLLAPVFTNQGECDPVSRTITSILIAFCGLSSFLLSFTDCFKDNDGNIYYGFATFNGLW 120
           FQLLAPVFTNQGECDPVSRTITSILIAFCGLSSFLLSFTDCFKDNDGNIYYGFATFNGLW
Sbjct: 61  FQLLAPVFTNQGECDPVSRTITSILIAFCGLSSFLLSFTDCFKDNDGNIYYGFATFNGLW 120

Query: 121 VIDGSTTIPSQLAAKYRLRFIDFLHAFMSVFVFAAIALFDKNTVQCFYPTPSKETQEILT 180
           VIDGSTTIPSQLAAKYRLRFIDFLHAFMSVFVFAAIALFDKNTVQCFYPTPSKETQEILT
Sbjct: 121 VIDGSTTIPSQLAAKYRLRFIDFLHAFMSVFVFAAIALFDKNTVQCFYPTPSKETQEILT 180

Query: 181 ALPVGIGVLCSMLFVAFPTHRHGIGFPLTAN 212
           ALPVGIGVLCSMLFVAFPTHRHGIGFPLTAN
Sbjct: 181 ALPVGIGVLCSMLFVAFPTHRHGIGFPLTAN 211

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BLAST of Spo18003.1 vs. NCBI nr
Match: gi|731350232|ref|XP_010686399.1| (PREDICTED: uncharacterized protein LOC104900624 [Beta vulgaris subsp. vulgaris])

HSP 1 Score: 360.1 bits (923), Expect = 2.600e-96
Identity = 178/207 (85.99%), Postives = 190/207 (91.79%), Query Frame = 1

		  
Query: 5   AINEEAREIDDEQKVPLLQDIPPSTVDRNPIQQAISQTFQSTAHLANLLPTGTVMAFQLL 64
           A+ EE ++IDDEQK+PLLQD P  TVDRNPIQQAISQTFQSTAHLA LLPTGTVMAFQLL
Sbjct: 27  AVKEEVQQIDDEQKLPLLQDTP-DTVDRNPIQQAISQTFQSTAHLAKLLPTGTVMAFQLL 86

Query: 65  APVFTNQGECDPVSRTITSILIAFCGLSSFLLSFTDCFKDNDGNIYYGFATFNGLWVIDG 124
           AP+FTNQGECD VS+T+TSILIA CGLSSFLLSFTDCFKD+DG IYYGFATF GLWVIDG
Sbjct: 87  APIFTNQGECDSVSQTMTSILIALCGLSSFLLSFTDCFKDDDGKIYYGFATFKGLWVIDG 146

Query: 125 STTIPSQLAAKYRLRFIDFLHAFMSVFVFAAIALFDKNTVQCFYPTPSKETQEILTALPV 184
             T+P +LAAKYRLRFIDFLHAFMSVFVFAAIALFDKNTVQC YPTPSKETQEILTALP+
Sbjct: 147 LATLPPELAAKYRLRFIDFLHAFMSVFVFAAIALFDKNTVQCLYPTPSKETQEILTALPI 206

Query: 185 GIGVLCSMLFVAFPTHRHGIGFPLTAN 212
           GIGVL SMLFV FPT RHGIGFPLT+N
Sbjct: 207 GIGVLSSMLFVVFPTQRHGIGFPLTSN 232

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BLAST of Spo18003.1 vs. NCBI nr
Match: gi|297740432|emb|CBI30614.3| (unnamed protein product [Vitis vinifera])

HSP 1 Score: 309.3 bits (791), Expect = 5.200e-81
Identity = 151/212 (71.23%), Postives = 178/212 (83.96%), Query Frame = 1

		  
Query: 1   MDVSAINEEAREIDDEQKVPLLQDIP-PSTVDRNPIQQAISQTFQSTAHLANLLPTGTVM 60
           M+    +EE+  ++D QKV LLQD+P P T  R PIQ AISQTFQSTAHLANLLPTGTV+
Sbjct: 65  MEFKVEDEESWHLND-QKVALLQDMPRPQTGQRTPIQMAISQTFQSTAHLANLLPTGTVL 124

Query: 61  AFQLLAPVFTNQGECDPVSRTITSILIAFCGLSSFLLSFTDCFKDNDGNIYYGFATFNGL 120
           AFQ L+PV TN+GECDPVSR +TS L+A CG+S FL  FTD F+DN+GN+Y GFATF GL
Sbjct: 125 AFQFLSPVLTNKGECDPVSRFMTSSLLALCGMSCFLQCFTDSFRDNNGNVYSGFATFQGL 184

Query: 121 WVIDGSTTIPSQLAAKYRLRFIDFLHAFMSVFVFAAIALFDKNTVQCFYPTPSKETQEIL 180
           W+IDGS T+P +LAA+Y+LRFIDF+HAFMS+ VFAAIALFD+N V CFYPTPS ET+E+L
Sbjct: 185 WIIDGSATLPPELAAEYQLRFIDFIHAFMSILVFAAIALFDENVVNCFYPTPSDETKELL 244

Query: 181 TALPVGIGVLCSMLFVAFPTHRHGIGFPLTAN 212
           T+LPVGIGV CSMLFV FPT RHGIGFPL+AN
Sbjct: 245 TSLPVGIGVFCSMLFVVFPTRRHGIGFPLSAN 275

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BLAST of Spo18003.1 vs. NCBI nr
Match: gi|225443596|ref|XP_002278769.1| (PREDICTED: uncharacterized protein LOC100262407 [Vitis vinifera])

HSP 1 Score: 309.3 bits (791), Expect = 5.200e-81
Identity = 151/212 (71.23%), Postives = 178/212 (83.96%), Query Frame = 1

		  
Query: 1   MDVSAINEEAREIDDEQKVPLLQDIP-PSTVDRNPIQQAISQTFQSTAHLANLLPTGTVM 60
           M+    +EE+  ++D QKV LLQD+P P T  R PIQ AISQTFQSTAHLANLLPTGTV+
Sbjct: 1   MEFKVEDEESWHLND-QKVALLQDMPRPQTGQRTPIQMAISQTFQSTAHLANLLPTGTVL 60

Query: 61  AFQLLAPVFTNQGECDPVSRTITSILIAFCGLSSFLLSFTDCFKDNDGNIYYGFATFNGL 120
           AFQ L+PV TN+GECDPVSR +TS L+A CG+S FL  FTD F+DN+GN+Y GFATF GL
Sbjct: 61  AFQFLSPVLTNKGECDPVSRFMTSSLLALCGMSCFLQCFTDSFRDNNGNVYSGFATFQGL 120

Query: 121 WVIDGSTTIPSQLAAKYRLRFIDFLHAFMSVFVFAAIALFDKNTVQCFYPTPSKETQEIL 180
           W+IDGS T+P +LAA+Y+LRFIDF+HAFMS+ VFAAIALFD+N V CFYPTPS ET+E+L
Sbjct: 121 WIIDGSATLPPELAAEYQLRFIDFIHAFMSILVFAAIALFDENVVNCFYPTPSDETKELL 180

Query: 181 TALPVGIGVLCSMLFVAFPTHRHGIGFPLTAN 212
           T+LPVGIGV CSMLFV FPT RHGIGFPL+AN
Sbjct: 181 TSLPVGIGVFCSMLFVVFPTRRHGIGFPLSAN 211

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BLAST of Spo18003.1 vs. NCBI nr
Match: gi|1009106526|ref|XP_015874926.1| (PREDICTED: uncharacterized protein LOC107411781 [Ziziphus jujuba])

HSP 1 Score: 306.2 bits (783), Expect = 4.400e-80
Identity = 146/212 (68.87%), Postives = 178/212 (83.96%), Query Frame = 1

		  
Query: 1   MDVSAINEEAREIDDEQKVPLLQDIPPSTVD-RNPIQQAISQTFQSTAHLANLLPTGTVM 60
           M++    EE    +DEQK+PLL+DIP    D +  +Q+AISQTFQSTAHLANLLPTGTV+
Sbjct: 1   MEIKVDAEEYPNHNDEQKLPLLKDIPTPIADGKTLVQKAISQTFQSTAHLANLLPTGTVL 60

Query: 61  AFQLLAPVFTNQGECDPVSRTITSILIAFCGLSSFLLSFTDCFKDNDGNIYYGFATFNGL 120
           AFQLL+P+FTNQG CDPVSR++T+ L+A CG+S  LLSFTD F+D +GN+ YGFATF GL
Sbjct: 61  AFQLLSPIFTNQGNCDPVSRSMTAGLVALCGMSCLLLSFTDSFRDKNGNVCYGFATFRGL 120

Query: 121 WVIDGSTTIPSQLAAKYRLRFIDFLHAFMSVFVFAAIALFDKNTVQCFYPTPSKETQEIL 180
           WVIDGS  +P+  AAKYRL+FIDF+HAFMS+ VFAA+ALFD+N V+CFYPTPS+ETQE+L
Sbjct: 121 WVIDGSAILPTDEAAKYRLQFIDFMHAFMSILVFAAVALFDQNVVRCFYPTPSEETQEVL 180

Query: 181 TALPVGIGVLCSMLFVAFPTHRHGIGFPLTAN 212
           T+LPVGIGV CSMLF+ FPT RHGIGFPL+ N
Sbjct: 181 TSLPVGIGVFCSMLFMVFPTKRHGIGFPLSVN 212

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BLAST of Spo18003.1 vs. UniProtKB/TrEMBL
Match: A0A0K9R813_SPIOL (Uncharacterized protein OS=Spinacia oleracea GN=SOVF_096570 PE=4 SV=1)

HSP 1 Score: 423.7 bits (1088), Expect = 1.300e-115
Identity = 211/211 (100.00%), Postives = 211/211 (100.00%), Query Frame = 1

		  
Query: 1   MDVSAINEEAREIDDEQKVPLLQDIPPSTVDRNPIQQAISQTFQSTAHLANLLPTGTVMA 60
           MDVSAINEEAREIDDEQKVPLLQDIPPSTVDRNPIQQAISQTFQSTAHLANLLPTGTVMA
Sbjct: 1   MDVSAINEEAREIDDEQKVPLLQDIPPSTVDRNPIQQAISQTFQSTAHLANLLPTGTVMA 60

Query: 61  FQLLAPVFTNQGECDPVSRTITSILIAFCGLSSFLLSFTDCFKDNDGNIYYGFATFNGLW 120
           FQLLAPVFTNQGECDPVSRTITSILIAFCGLSSFLLSFTDCFKDNDGNIYYGFATFNGLW
Sbjct: 61  FQLLAPVFTNQGECDPVSRTITSILIAFCGLSSFLLSFTDCFKDNDGNIYYGFATFNGLW 120

Query: 121 VIDGSTTIPSQLAAKYRLRFIDFLHAFMSVFVFAAIALFDKNTVQCFYPTPSKETQEILT 180
           VIDGSTTIPSQLAAKYRLRFIDFLHAFMSVFVFAAIALFDKNTVQCFYPTPSKETQEILT
Sbjct: 121 VIDGSTTIPSQLAAKYRLRFIDFLHAFMSVFVFAAIALFDKNTVQCFYPTPSKETQEILT 180

Query: 181 ALPVGIGVLCSMLFVAFPTHRHGIGFPLTAN 212
           ALPVGIGVLCSMLFVAFPTHRHGIGFPLTAN
Sbjct: 181 ALPVGIGVLCSMLFVAFPTHRHGIGFPLTAN 211

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BLAST of Spo18003.1 vs. UniProtKB/TrEMBL
Match: F6HM38_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_10s0003g00320 PE=4 SV=1)

HSP 1 Score: 309.3 bits (791), Expect = 3.600e-81
Identity = 151/212 (71.23%), Postives = 178/212 (83.96%), Query Frame = 1

		  
Query: 1   MDVSAINEEAREIDDEQKVPLLQDIP-PSTVDRNPIQQAISQTFQSTAHLANLLPTGTVM 60
           M+    +EE+  ++D QKV LLQD+P P T  R PIQ AISQTFQSTAHLANLLPTGTV+
Sbjct: 35  MEFKVEDEESWHLND-QKVALLQDMPRPQTGQRTPIQMAISQTFQSTAHLANLLPTGTVL 94

Query: 61  AFQLLAPVFTNQGECDPVSRTITSILIAFCGLSSFLLSFTDCFKDNDGNIYYGFATFNGL 120
           AFQ L+PV TN+GECDPVSR +TS L+A CG+S FL  FTD F+DN+GN+Y GFATF GL
Sbjct: 95  AFQFLSPVLTNKGECDPVSRFMTSSLLALCGMSCFLQCFTDSFRDNNGNVYSGFATFQGL 154

Query: 121 WVIDGSTTIPSQLAAKYRLRFIDFLHAFMSVFVFAAIALFDKNTVQCFYPTPSKETQEIL 180
           W+IDGS T+P +LAA+Y+LRFIDF+HAFMS+ VFAAIALFD+N V CFYPTPS ET+E+L
Sbjct: 155 WIIDGSATLPPELAAEYQLRFIDFIHAFMSILVFAAIALFDENVVNCFYPTPSDETKELL 214

Query: 181 TALPVGIGVLCSMLFVAFPTHRHGIGFPLTAN 212
           T+LPVGIGV CSMLFV FPT RHGIGFPL+AN
Sbjct: 215 TSLPVGIGVFCSMLFVVFPTRRHGIGFPLSAN 245

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BLAST of Spo18003.1 vs. UniProtKB/TrEMBL
Match: A0A061GE95_THECC (Uncharacterized protein OS=Theobroma cacao GN=TCM_029803 PE=4 SV=1)

HSP 1 Score: 304.7 bits (779), Expect = 8.900e-80
Identity = 152/212 (71.70%), Postives = 176/212 (83.02%), Query Frame = 1

		  
Query: 1   MDVSAINEEAREIDDEQKVPLLQDIPPS-TVDRNPIQQAISQTFQSTAHLANLLPTGTVM 60
           M++    EE+ E   EQKVPLLQ +  S T  +NP+Q+AISQTFQSTAHLANLLPTGTV+
Sbjct: 1   MEIMIQGEESPE-HGEQKVPLLQSLTVSETEKKNPVQKAISQTFQSTAHLANLLPTGTVL 60

Query: 61  AFQLLAPVFTNQGECDPVSRTITSILIAFCGLSSFLLSFTDCFKDNDGNIYYGFATFNGL 120
           AFQLL+P+FTNQG CD VSR++T+ LI  CGLS FL+SFTD F+D +G + YGFATF GL
Sbjct: 61  AFQLLSPIFTNQGNCDSVSRSMTAGLILLCGLSCFLMSFTDSFRDKNGTVCYGFATFYGL 120

Query: 121 WVIDGSTTIPSQLAAKYRLRFIDFLHAFMSVFVFAAIALFDKNTVQCFYPTPSKETQEIL 180
           WVIDGS T+P +LAAKYRL FIDF+HAFMS+ VFAA+ALFD N V CFYPTPS + QEIL
Sbjct: 121 WVIDGSITLPPELAAKYRLHFIDFMHAFMSILVFAAVALFDHNVVSCFYPTPSDQAQEIL 180

Query: 181 TALPVGIGVLCSMLFVAFPTHRHGIGFPLTAN 212
           TALPVGIGVLCSMLFV FPT RHGIGFPL+AN
Sbjct: 181 TALPVGIGVLCSMLFVVFPTTRHGIGFPLSAN 211

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BLAST of Spo18003.1 vs. UniProtKB/TrEMBL
Match: M5WV72_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa011352mg PE=4 SV=1)

HSP 1 Score: 300.1 bits (767), Expect = 2.200e-78
Identity = 147/214 (68.69%), Postives = 177/214 (82.71%), Query Frame = 1

		  
Query: 1   MDVSAINEEAREI-DDEQKVPLLQDIPPSTVD--RNPIQQAISQTFQSTAHLANLLPTGT 60
           M++    EE+R   DDEQK+PLLQD+P S  +  R  IQ+AI QTFQSTAHLANLLPTGT
Sbjct: 1   MEIKIQAEESRHWPDDEQKLPLLQDMPKSVTEEERTLIQKAIRQTFQSTAHLANLLPTGT 60

Query: 61  VMAFQLLAPVFTNQGECDPVSRTITSILIAFCGLSSFLLSFTDCFKDNDGNIYYGFATFN 120
           V+AFQLLAP+F+NQG CD VSR++T+ L+A CG S FLLSFTD ++D +GN+ YGFATF 
Sbjct: 61  VLAFQLLAPIFSNQGNCDSVSRSMTAGLVALCGASCFLLSFTDSYRDKNGNVCYGFATFR 120

Query: 121 GLWVIDGSTTIPSQLAAKYRLRFIDFLHAFMSVFVFAAIALFDKNTVQCFYPTPSKETQE 180
           GLW+IDGSTT+  ++ A ++LRFIDFLHAFMS+ VFAA+ALFD+N V CFYPTPS + QE
Sbjct: 121 GLWIIDGSTTLSPEVDANFQLRFIDFLHAFMSILVFAAVALFDQNVVNCFYPTPSDKAQE 180

Query: 181 ILTALPVGIGVLCSMLFVAFPTHRHGIGFPLTAN 212
           ILTALPVGIGV+CSMLFV FPT RHGIGFPL+ N
Sbjct: 181 ILTALPVGIGVICSMLFVVFPTKRHGIGFPLSVN 214

[Close]

BLAST of Spo18003.1 vs. UniProtKB/TrEMBL
Match: A0A0V0HET4_SOLCH (Putative ovule protein OS=Solanum chacoense PE=4 SV=1)

HSP 1 Score: 296.6 bits (758), Expect = 2.400e-77
Identity = 141/209 (67.46%), Postives = 173/209 (82.78%), Query Frame = 1

		  
Query: 1   MDVSAINEEAREIDDEQKVPLLQDIPPSTVDRNPIQQAISQTFQSTAHLANLLPTGTVMA 60
           M++   NE  R +D+E K PLL++     V++N IQQAISQTF+STAHLANLLPTG+V+A
Sbjct: 1   MEIKVENEIPRNLDEE-KAPLLENSELPEVEKNLIQQAISQTFKSTAHLANLLPTGSVLA 60

Query: 61  FQLLAPVFTNQGECDPVSRTITSILIAFCGLSSFLLSFTDCFKDNDGNIYYGFATFNGLW 120
           FQ L+P+FTNQG+CD V R++T+ L+A CGLS FLLSFTD FKD  GN+ YGFAT  G+W
Sbjct: 61  FQFLSPIFTNQGQCDVVGRSLTAALVALCGLSCFLLSFTDSFKDQKGNVCYGFATTRGMW 120

Query: 121 VIDGSTTIPSQLAAKYRLRFIDFLHAFMSVFVFAAIALFDKNTVQCFYPTPSKETQEILT 180
           +IDGS T+P ++AAKY+L+FIDF+HA MS+ VFAA+ALFD+N V CFYPTPS ETQE+LT
Sbjct: 121 IIDGSATLPLEVAAKYKLKFIDFMHAIMSILVFAAVALFDQNVVSCFYPTPSYETQELLT 180

Query: 181 ALPVGIGVLCSMLFVAFPTHRHGIGFPLT 210
           ALPV IGV+CSMLFV FPT RHGIGFPLT
Sbjct: 181 ALPVAIGVICSMLFVVFPTQRHGIGFPLT 208

[Close]

BLAST of Spo18003.1 vs. TAIR (Arabidopsis)
Match: AT4G18425.1 (Protein of unknown function (DUF679))

HSP 1 Score: 255.8 bits (652), Expect = 2.400e-68
Identity = 116/176 (65.91%), Postives = 147/176 (83.52%), Query Frame = 1

		  
Query: 35  IQQAISQTFQSTAHLANLLPTGTVMAFQLLAPVFTNQGECDPVSRTITSILIAFCGLSSF 94
           IQ+AI QTFQ+TAHLANLLPTGTV+AFQLL+P+F+N G+CD VS+ +TS L+A CG S F
Sbjct: 37  IQKAIGQTFQTTAHLANLLPTGTVLAFQLLSPIFSNGGQCDLVSKIMTSTLVAICGFSCF 96

Query: 95  LLSFTDCFKDNDGNIYYGFATFNGLWVIDGSTTIPSQLAAKYRLRFIDFLHAFMSVFVFA 154
           +LSFTD +KD +G I YG AT +G W+IDGSTT+P +L+ +Y+LRFIDF+HAFMS+FVF 
Sbjct: 97  ILSFTDSYKDKNGTICYGLATIHGFWIIDGSTTLPQELSKRYKLRFIDFVHAFMSLFVFG 156

Query: 155 AIALFDKNTVQCFYPTPSKETQEILTALPVGIGVLCSMLFVAFPTHRHGIGFPLTA 211
           A+ LFD+N V CF+P+PS E  E+LTALPVG+GV  SMLF  FPT R+GIGFPL++
Sbjct: 157 AVVLFDRNAVNCFFPSPSAEALEVLTALPVGVGVFSSMLFATFPTTRNGIGFPLSS 212

[Close]

BLAST of Spo18003.1 vs. TAIR (Arabidopsis)
Match: AT5G46090.1 (Protein of unknown function (DUF679))

HSP 1 Score: 245.0 bits (624), Expect = 4.200e-65
Identity = 121/212 (57.08%), Postives = 160/212 (75.47%), Query Frame = 1

		  
Query: 6   INEEAREIDDEQKVPLL------QDIPPSTVDRNPI-QQAISQTFQSTAHLANLLPTGTV 65
           ++EEA  I +E  VPLL      +D+P   ++RN + Q+AI +TFQ+TA+LANLLPTGTV
Sbjct: 5   VDEEAGIIKEET-VPLLDDQNRNRDLPD--IERNTMMQKAIGKTFQTTANLANLLPTGTV 64

Query: 66  MAFQLLAPVFTNQGECDPVSRTITSILIAFCGLSSFLLSFTDCFKDNDGNIYYGFATFNG 125
           +AFQ+L+P+ TN G CD  SR +T++L++ CG S F+LSFTD +KD +G++ YGFAT +G
Sbjct: 65  LAFQILSPICTNVGRCDLTSRFMTALLVSICGFSCFILSFTDSYKDLNGSVCYGFATIHG 124

Query: 126 LWVIDGSTTIPSQLAAKYRLRFIDFLHAFMSVFVFAAIALFDKNTVQCFYPTPSKETQEI 185
            W+IDGS T+P +L+  Y+LRFIDF+HA MS  VF A+ LFD+N V CFYP PS E  E+
Sbjct: 125 FWIIDGSATLPQELSKSYKLRFIDFVHAIMSFLVFGAVVLFDQNVVNCFYPEPSAEVVEL 184

Query: 186 LTALPVGIGVLCSMLFVAFPTHRHGIGFPLTA 211
           LT LPV +GV CSM+F  FPT RHGIGFPL+A
Sbjct: 185 LTTLPVAVGVFCSMVFAKFPTTRHGIGFPLSA 213

[Close]

BLAST of Spo18003.1 vs. TAIR (Arabidopsis)
Match: AT4G24310.1 (Protein of unknown function (DUF679))

HSP 1 Score: 198.7 bits (504), Expect = 3.500e-51
Identity = 96/185 (51.89%), Postives = 129/185 (69.73%), Query Frame = 1

		  
Query: 32  RNPIQQAI-SQTFQSTAHLANLLPTGTVMAFQLLAPVFTNQGECDPVSRTITSILIAFCG 91
           R   Q A+ SQT  S A+LANLLPTGT++AF LL PVFT+ G CD  ++ +T +L+    
Sbjct: 27  RQTSQHAVMSQTLTSAANLANLLPTGTLLAFTLLIPVFTSNGSCDYPTQVLTIVLLTLLS 86

Query: 92  LSSFLLSFTDCFKDNDGNIYYGFATFNGLWVID----GSTTIPSQLAAKYRLRFIDFLHA 151
           +S FL SFTD  K  DGN+YYGFAT  G+WV D        +P+   +KYR+R ID++HA
Sbjct: 87  ISCFLSSFTDSVKAEDGNVYYGFATRKGMWVFDYPDPDGLGLPN--LSKYRIRIIDWIHA 146

Query: 152 FMSVFVFAAIALFDKNTVQCFYPTPSKETQEILTALPVGIGVLCSMLFVAFPTHRHGIGF 211
            +SV VF A+AL DKN V CFYP P +ET+++L  +P+G+GV+C MLF+ FP  RHGIG+
Sbjct: 147 VLSVLVFGAVALRDKNAVSCFYPAPEQETKKVLDIVPMGVGVICGMLFLVFPARRHGIGY 206

[Close]

BLAST of Spo18003.1 vs. TAIR (Arabidopsis)
Match: AT3G02430.1 (Protein of unknown function (DUF679))

HSP 1 Score: 196.8 bits (499), Expect = 1.300e-50
Identity = 94/180 (52.22%), Postives = 128/180 (71.11%), Query Frame = 1

		  
Query: 36  QQAISQTFQSTAHLANLLPTGTVMAFQLLAPVFTNQGECDPVSRTITSILIAFCGLSSFL 95
           Q+A+S T  S A+L+NLLPTGT++AFQLL PVFT+ G CD  +R +T++L+     S F+
Sbjct: 38  QRAMSNTLTSAANLSNLLPTGTLLAFQLLTPVFTSNGVCDHATRFLTAVLLFLLAASCFV 97

Query: 96  LSFTDCFKDNDGNIYYGFATFNGLWVIDGSTTIPSQLA----AKYRLRFIDFLHAFMSVF 155
            SFTD  K +DG IY+GF TF G+WV+D     PS L     AKYR+RF+D++HA +SV 
Sbjct: 98  SSFTDSVKADDGTIYFGFVTFKGMWVVDYPD--PSGLGLPDLAKYRMRFVDWIHATLSVL 157

Query: 156 VFAAIALFDKNTVQCFYPTPSKETQEILTALPVGIGVLCSMLFVAFPTHRHGIGFPLTAN 212
           VF A+AL DK    CFYP+P  ET+ +L  +PVG+GV+CS+LF+ FP  RHGIG+ +T +
Sbjct: 158 VFGAVALRDKYITDCFYPSPEAETKHVLDIVPVGVGVMCSLLFMVFPARRHGIGYLVTGS 215

[Close]

BLAST of Spo18003.1 vs. TAIR (Arabidopsis)
Match: AT3G21550.1 (DUF679 domain membrane protein 2)

HSP 1 Score: 143.3 bits (360), Expect = 1.700e-34
Identity = 73/167 (43.71%), Postives = 94/167 (56.29%), Query Frame = 1

		  
Query: 41  QTFQSTAHLANLLPTGTVMAFQLLAPVFTNQGECDPVSRTITSILIAFCGLSSFLLSFTD 100
           +T+     L  LLPTGTV  FQ L PV TN G C  +++ +T +LI  C  S     FTD
Sbjct: 11  RTYSGVGDLIKLLPTGTVFLFQFLNPVLTNNGHCLLINKYLTGVLIVICAFSCCFTCFTD 70

Query: 101 CFKDNDGNIYYGFATFNGLWVIDGSTTIPSQLAAKYRLRFIDFLHAFMSVFVFAAIALFD 160
            ++  DG ++YG AT  GLW    S  + S+     RLR  DF+HAF S+ VF+ I+L D
Sbjct: 71  SYRTRDGYVHYGVATVKGLWPDSSSVDLSSK-----RLRVGDFVHAFFSLIVFSVISLLD 130

Query: 161 KNTVQCFYPTPSKETQEILTALPVGIGVLCSMLFVAFPTHRHGIGFP 208
            NTV CFYP      +  L  LP  IGV+   +F  FP+ RHGIG P
Sbjct: 131 ANTVNCFYPGFGSAGKIFLMVLPPVIGVISGAVFTVFPSRRHGIGNP 172

The following BLAST results are available for this feature:

BLAST of Spo18003.1 vs. NCBI nr
BLAST of Spo18003.1 vs. UniProtKB/TrEMBL
BLAST of Spo18003.1 vs. ExPASy Swiss-Prot
BLAST of Spo18003.1 vs. TAIR (Arabidopsis)

BLAST of Spo18003.1 vs. NCBI nr
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. NCBI nr)
Total hits: 5

Position :

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Match Name	E-value	Identity	Description
gi\|902207109\|gb\|KNA15625.1\|	1.9e-115	100.	hypothetical protein SOVF_0965...	[more]
gi\|731350232\|ref\|XP_010686399.1\|	2.6e-96	85.9	PREDICTED: uncharacterized pro...	[more]
gi\|297740432\|emb\|CBI30614.3\|	5.2e-81	71.2	unnamed protein product [Vitis...	[more]
gi\|225443596\|ref\|XP_002278769.1\|	5.2e-81	71.2	PREDICTED: uncharacterized pro...	[more]
gi\|1009106526\|ref\|XP_015874926.1\|	4.4e-80	68.8	PREDICTED: uncharacterized pro...	[more]

BLAST of Spo18003.1 vs. UniProtKB/TrEMBL
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. UniprotKB/TrEMBL)
Total hits: 5

Position :

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Match Name	E-value	Identity	Description
A0A0K9R813_SPIOL	1.3e-115	100.	Uncharacterized protein OS=Spi...	[more]
F6HM38_VITVI	3.6e-81	71.2	Putative uncharacterized prote...	[more]
A0A061GE95_THECC	8.9e-80	71.7	Uncharacterized protein OS=The...	[more]
M5WV72_PRUPE	2.2e-78	68.6	Uncharacterized protein OS=Pru...	[more]
A0A0V0HET4_SOLCH	2.4e-77	67.4	Putative ovule protein OS=Sola...	[more]

BLAST of Spo18003.1 vs. ExPASy Swiss-Prot
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. ExPASy SwissProt)
Total hits: 0

Position :

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Match Name	E-value	Identity	Description

BLAST of Spo18003.1 vs. TAIR (Arabidopsis)
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. TAIR)
Total hits: 5

Position :

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Match Name	E-value	Identity	Description
AT4G18425.1	2.4e-68	65.9	Protein of unknown function (D...	[more]
AT5G46090.1	4.2e-65	57.0	Protein of unknown function (D...	[more]
AT4G24310.1	3.5e-51	51.8	Protein of unknown function (D...	[more]
AT3G02430.1	1.3e-50	52.2	Protein of unknown function (D...	[more]
AT3G21550.1	1.7e-34	43.7	DUF679 domain membrane protein...	[more]

InterPro

Analysis Name: InterPro Annotations of S. oleracea
Date Performed: 2018-06-29

Position :

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IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR007770	Protein of unknown function DUF679	PFAM	PF05078	DUF679	coord: 45..206 score: 6.8
None	No IPR available	PANTHER	PTHR31621	FAMILY NOT NAMED	coord: 1..211 score: 7.3E
None	No IPR available	PANTHER	PTHR31621:SF0	DUF679 DOMAIN MEMBRANE PROTEIN 7	coord: 1..211 score: 7.3E

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006979	response to oxidative stress
biological_process	GO:0042744	hydrogen peroxide catabolic process
biological_process	GO:0010089	xylem development
biological_process	GO:0045492	xylan biosynthetic process
biological_process	GO:0009827	plant-type cell wall modification
biological_process	GO:0006508	proteolysis
biological_process	GO:0045489	pectin biosynthetic process
biological_process	GO:0043086	negative regulation of catalytic activity
biological_process	GO:0055114	oxidation-reduction process
biological_process	GO:0010014	meristem initiation
biological_process	GO:0010413	glucuronoxylan metabolic process
biological_process	GO:0030244	cellulose biosynthetic process
biological_process	GO:0008152	metabolic process
cellular_component	GO:0005794	Golgi apparatus
cellular_component	GO:0016021	integral component of membrane
cellular_component	GO:0009505	plant-type cell wall
cellular_component	GO:0005576	extracellular region
cellular_component	GO:0005886	plasma membrane
molecular_function	GO:0004252	serine-type endopeptidase activity
molecular_function	GO:0020037	heme binding
molecular_function	GO:0046872	metal ion binding
molecular_function	GO:0004601	peroxidase activity
molecular_function	GO:0005515	protein binding
molecular_function	GO:0008270	zinc ion binding
molecular_function	GO:0042802	identical protein binding
molecular_function	GO:0032440	2-alkenal reductase [NAD(P)] activity
molecular_function	GO:0004185	serine-type carboxypeptidase activity
molecular_function	GO:0016491	oxidoreductase activity
molecular_function	GO:0045735	nutrient reservoir activity
molecular_function	GO:0030145	manganese ion binding

RNA-Seq Expression

Co-expression


Gene	r value	Expression
Spo09003	0.74	Barchart \| Table
Spo12932	0.73	Barchart \| Table
Spo00420	0.70	Barchart \| Table
Spo03378	0.67	Barchart \| Table
Spo07647	0.66	Barchart \| Table
Spo12375	0.66	Barchart \| Table
Spo22865	0.65	Barchart \| Table
Spo02925	0.65	Barchart \| Table
Spo04567	0.65	Barchart \| Table