Overview
Sequences
The following sequences are available for this feature:
Legend: exonfive_prime_UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.CTATGAAATCAATAAATATTATAAATACAAAGTTTTCAATAACAAATAATCCTAAATTTCTGCCATGTTTTTGGGCATGGAAACCTCCATGAACATACTCCACCCTAACTTAGTACTATTTTTTCTTCGTACTTTCATCTTTTTATTACGTGCTTCGGCCGAGTCTTCTCTCGCCGAGCCTAGGGCGCCGGTAAATTCCGTCCAAGCAATATTTGTGTTCGGTGACTCGACCTCCGACCCGGGGAACAATAACTACATAAGGACTCCGTTTAAGAGTGATTTTGCACCTTATGGAAGGGATTTACCCGACCATGTTGCTACGGGAAGGTTTAGTAATGGAAGACTGAGTACGGATTTTATTGGTACGTACGTAACATTAGTAACTTATTAGAATACAATGATTATTTAATTTTATGTTATGAAGTGGTAAATTAATATTTATTTCTATGTTTTGTTGCAGCAAGATATGTTGGAATAAAAGAACTAGTTCCACCATATTTAAACTCGTCGCTTAGTATAGAAGAGTTGATGACTGGAGTTAGTTTTGCTTCTGCTGGTTCTGGATATGATCCCCTTACACCAACACTAAGTGTAATATTCCTTTCTCTTTTATGAAAATTGCAAGTGGCAAACTGCTTGTTTGGATTGGGTTCGGATTGGGTTCGGTTTGGGTTCCGTTCCATTCGGGCCAAATTCGAGTAAAATATAAATCGGTTTGATTTCGTGTCTATGAGGTCGGTAGGGGGTTGGGTTGGGTCATATTTGATTTATTATCAATATGCTTATGACAATAAAATCTAATATATATATATATATATATTATATATATATATATATATATATATATATATATATATATAAGAGCCATATTTGCTGAACTATTAGAGCGCCACCCAGGATTACTAATGGTTTCGGCCAATGAAATAAGATTTCTAATTCATTTTTGAATTAAAAAAATCGAGTGCCACGTAGATAATTAATTAGTGCCACGTAGATATTTAAATTAATCAATAATTACTAATATATACAATTCCATCCAAAATCAAATGTTATAATAATTAAAAAATAAATCTAAAATAAAATTCATAAAAAACCAAACATTACTCTAATATACATATATAAAGGAGGCATATTTGCTGAACATTAGAGCGCCACCTAGGATTACTAATGGTTTCGGCCAATGAAAAATAAGATTTCTAATTTATTTTTGAATTAAAAAAATCGAGTGCCACGTAGATAATTAATTAAGTGCCACATAGATATTTAAATTAATTAATTAATTACTAATATATACAATTCCATCCAAAATCAAACGCTCTAATAATTAAAAAATAAATCTAAAATAAAATTCATCCAAAATCTTACACTAATCTAAAATAAAGATAATTAATTAGGTGCCACGTAGATATTTAAATTAATTAATTAATTACTAATATATACAATTCCATCCAAAATCAAACGCTCTAATAATTAAAAAATAAATCTAAAATAAAATTCATCCAAANCCAAAATCAAACGCTCTAATAATTAAAAAATAAATCTAAAATAAAATTCATCCAAAATCATACAATAATCTAAAATAAAATTCAATCTAAATCAAACATTAATCCAATATTAGAGCGCCACGTAGGAAATCTAATGGTTTCGTCCAATGAAAAATAAGACTTCAAAATTATTTTTGAATTAAAAAGAGGAATGCCACGTAGATAAATAATTAGGTGTCACATAGATATTTGTATTACTCCCTCCGTCTCTTTTTTTTTACGTATTCCATTTTGGGTGTTTCCTTTTGTTCTTTACATTTCCTTTTATATTGTCACATAATACATTAATATTCTATCAAAATTTGTGCCCAAATATTATTTTAACCAATTAAATCCATTGGACATTAAATATTTCTCATTTTCCCAATGTCAGATTTTTGATAAAAGTGAAAACATTATAAATTAACGTAATTTTTCTTGTTTAAATAAAAAAGCAGAGGAATCTCAATGCACATTAAATAGTCGTTAAATCGCGTGAAAAACATCAAACGTAAAAAACAAAAAGAGACGGAGGGAGTAATTTCTAATTTATTTTTGAATTAAAAAAATCGAGTGCCACGTAAATAATTAATTAGGTGCCACGTAGATATTTAAATTAATTAAATAATTACTAATATATACAATTCCATCCAAAATCAAACGCTCTAATAATTAAAAAATAAATCTAAAATAAAATTCATCCAAAATCATACACTAATCTAAAATCAAATTCAATCTAAAATCAAACATNTTCATCCAAAATCATACACTAATCTAAAATCAAATTCAATCTAAAATCAAACATTAATCCAATATAAGAGCGCCACGTAGGAAATCTAATGGTTTCGGCCAATGAAAAATAAGACTTCAAAATTATTTTTGAATTAAAAAGTCGAATGCCACGTAGATAAATAATTAGGTGCCACGTAGATATTTTTATTAATTAATTATTAATATTTCATATATACAAGTTCATCCAAAATCAAACACTATAATAATTAAAAAATAAATCTAAAATGAAACTCAATCCAAAATAAAAAAAATCAATCTAATCTAATATATAAAATATAGCAATTGATATATATAGGAGTTTTATTTTAACGTAACAATTTAATAGAAACCGTGCATCGCACGGGCTAAAATCTAGTCTAAAATAAAATTAAATCCAAAATCAAACATTTATCCAATATTAGAGCACAACGTAGGAAATCTAATGGTTTCGGCCAATGAAAAATAAGATTTCAAAATTATTTTTGAATTAAAAAGTCGAATGTCACGTAGATAAATAATTAGTTGCCACGTAGATATTTTTATTAATTAATTATTAATATTTCTTATATACAATTTCATCCAAAATCAAACACTATAATAATTGTTTTAACGTAACAATTTAATAGAAACCGTGCATCGCACGGGCTAAAATCTAGTAATCATTATTAGACACGTTTTGTAATTTGTAGGGTTAGTTTGGTTTGGGTCAAGTCAAGGTAATTTCGGATCAAGTTATTTCCGGTAGAGTTCAAGTCTCGAGTTGGGTAATTGAGTACGTACGTATCAGTTTTTACAGGTCCAGTATTAAGATTAATTAAATTTATAAAGAACATGTCATCATTAAATATTTAGGCATGTGGGATACCCAGCGCCTAAATATTTAATAATCATACCCTCAATTTACCGAAGTGACCAAGTTGATTTCAATTTAATTTAAGTATAGAGACGTGTATTTGCAACAGGGAGTAATTCCAATGTCAAAACAAATGGACAACTTCATGCAGTATAAATCAAGAATTGCGGGCACAATTGGTCAAGAAAAGACCACTGAGTTGATTAGTAAATCAGTATTCATAGTAAGTGCAGGAACTAATGATTTTGTGGTGAACTACTTCACTGTACCAATTCGGAAGAAGATGTATACTATCCCTCAATATCAACACTTCTTGGTGCAAAACGTTCACCAATTCATCAAGGTTAGTCTCAATAGTGCGCCTCTATCACATTGGCGGAGTCACATGGGTGCAAGGGTGGTAAACTGACCACTAAAAAAAATATTGTTTAATTTTATTGTATTAATTAAGAATATAATTAATAGACTTATCTAAGTACTCCAGTCACCCGACTTGACATGCCATTTTCAAAGACGACTTTCCCACTTCTCGAAAATCCAACTTCTTACCTTTTCCCAAATCTAGGAATCTTAATTCTGGCTTATAATTCATTTTTCATATTGTTAATTGAGGATTGTTGATTATTAATAGATGAGGAATAAGATATTAAGATGTAGTTACAAGTATATTCGATGGTTTTGATACAACATGTAGTTATAATGTCGATACCCCGACTAAATTTTCCTGGATCTGTCACTGCTCTATCCCTTATACACTTAGTCGTAGATGCATCGTATCAGGGATGGTAGTAGAAAATTAAAAGCATCGAAAATACCTTATTTAATTAGGTACATTAGGTAGAGGTATGTAAGAATTCCCTTAAGAAAAAGGAGTGTAGGTGAGAATTGCAAGAGTTAATGGATCTATGAATCTATCGATCAAGTCTTACTTGTATGAGAATAACCTTGGTCAAATGGTCAAATGGTCAAATCACAATGGGTTGTTAGCCAACCTTTGATTAACTAGTATGTAAAATCCAACTGATTATATATGTCTTTTAAACCCTTTTAAGTTGAGGTGTTTACTAAAAGTGTGAAAGTTTTCACGTTTATTACATTATTGGATATATTCTCCTCAACAAATTGACATTGTATACGTAGGTGTTACATCTTATTTTCAAAGATTTATGAACTCTACTATTACCTAATTATATTTATGAAATATGAATGTTGTTTCCTTAAATAGAATCTGTGGGACCAAGGAGCAAGGAAAATAGCAGTTGTTGGAGTACCACCAATGGGTTGCTTGCCAATTGTGATCACCATGGCATCAAACAACTCCATCTCACGACGTGGCTGCATTGAATCTCTATCGTCCGTTGCTACAGATTATAATCAACTTCTGCAAGTCAACCTTAAGTCCTTGGAACTTAGCTTACAAGATCAACACACCAAAATTGCTTACATTGACGTTTATTCACCGTTGCATGACATGATCCAGTTTGCTCGAAATTCAAATTACGGTATAAGTTTTTATTATGATTCATTTTGCTTAATCATCACATCTACTTAGAGTTTATATGACAAGTCACATCATCAATTGATGGTACGACGTGTTGCGCTATACAAAACAACTACTACGTATATTATATTTTCAAACACTTAATTCTTGGCTTATACTATGTAACTTTAATTCCTGCGCCGCAGGTTTCGAGCACGTAAACAGTGGGTGTTGCGGTACCGGTTATCTAGAAACGGCATTTATGTGTAATCCGGCTGCTTACGTATGTAGTGACGCATCTAAATATGTATTTTGGGATTCCATTCACCCCACTGAAATGACTTACTATCTCATCTTCAAATCCCTTCGTTCAGTCATTGATTATATCATTAAAGATTGA CTATGAAATCAATAAATATTATAAATACAAAGTTTTCAATAACAAATAATCCTAAATTTCTGCCATGTTTTTGGGCATGGAAACCTCCATGAACATACTCCACCCTAACTTAGTACTATTTTTTCTTCGTACTTTCATCTTTTTATTACGTGCTTCGGCCGAGTCTTCTCTCGCCGAGCCTAGGGCGCCGGTAAATTCCGTCCAAGCAATATTTGTGTTCGGTGACTCGACCTCCGACCCGGGGAACAATAACTACATAAGGACTCCGTTTAAGAGTGATTTTGCACCTTATGGAAGGGATTTACCCGACCATGTTGCTACGGGAAGGTTTAGTAATGGAAGACTGAGTACGGATTTTATTGCAAGATATGTTGGAATAAAAGAACTAGTTCCACCATATTTAAACTCGTCGCTTAGTATAGAAGAGTTGATGACTGGAGTTAGTTTTGCTTCTGCTGGTTCTGGATATGATCCCCTTACACCAACACTAAGTGGAGTAATTCCAATGTCAAAACAAATGGACAACTTCATGCAGTATAAATCAAGAATTGCGGGCACAATTGGTCAAGAAAAGACCACTGAGTTGATTAGTAAATCAGTATTCATAGTAAGTGCAGGAACTAATGATTTTGTGGTGAACTACTTCACTGTACCAATTCGGAAGAAGATGTATACTATCCCTCAATATCAACACTTCTTGGTGCAAAACGTTCACCAATTCATCAAGAATCTGTGGGACCAAGGAGCAAGGAAAATAGCAGTTGTTGGAGTACCACCAATGGGTTGCTTGCCAATTGTGATCACCATGGCATCAAACAACTCCATCTCACGACGTGGCTGCATTGAATCTCTATCGTCCGTTGCTACAGATTATAATCAACTTCTGCAAGTCAACCTTAAGTCCTTGGAACTTAGCTTACAAGATCAACACACCAAAATTGCTTACATTGACGTTTATTCACCGTTGCATGACATGATCCAGTTTGCTCGAAATTCAAATTACGGTTTCGAGCACGTAAACAGTGGGTGTTGCGGTACCGGTTATCTAGAAACGGCATTTATGTGTAATCCGGCTGCTTACGTATGTAGTGACGCATCTAAATATGTATTTTGGGATTCCATTCACCCCACTGAAATGACTTACTATCTCATCTTCAAATCCCTTCGTTCAGTCATTGATTATATCATTAAAGATTGA ATGTTTTTGGGCATGGAAACCTCCATGAACATACTCCACCCTAACTTAGTACTATTTTTTCTTCGTACTTTCATCTTTTTATTACGTGCTTCGGCCGAGTCTTCTCTCGCCGAGCCTAGGGCGCCGGTAAATTCCGTCCAAGCAATATTTGTGTTCGGTGACTCGACCTCCGACCCGGGGAACAATAACTACATAAGGACTCCGTTTAAGAGTGATTTTGCACCTTATGGAAGGGATTTACCCGACCATGTTGCTACGGGAAGGTTTAGTAATGGAAGACTGAGTACGGATTTTATTGCAAGATATGTTGGAATAAAAGAACTAGTTCCACCATATTTAAACTCGTCGCTTAGTATAGAAGAGTTGATGACTGGAGTTAGTTTTGCTTCTGCTGGTTCTGGATATGATCCCCTTACACCAACACTAAGTGGAGTAATTCCAATGTCAAAACAAATGGACAACTTCATGCAGTATAAATCAAGAATTGCGGGCACAATTGGTCAAGAAAAGACCACTGAGTTGATTAGTAAATCAGTATTCATAGTAAGTGCAGGAACTAATGATTTTGTGGTGAACTACTTCACTGTACCAATTCGGAAGAAGATGTATACTATCCCTCAATATCAACACTTCTTGGTGCAAAACGTTCACCAATTCATCAAGAATCTGTGGGACCAAGGAGCAAGGAAAATAGCAGTTGTTGGAGTACCACCAATGGGTTGCTTGCCAATTGTGATCACCATGGCATCAAACAACTCCATCTCACGACGTGGCTGCATTGAATCTCTATCGTCCGTTGCTACAGATTATAATCAACTTCTGCAAGTCAACCTTAAGTCCTTGGAACTTAGCTTACAAGATCAACACACCAAAATTGCTTACATTGACGTTTATTCACCGTTGCATGACATGATCCAGTTTGCTCGAAATTCAAATTACGGTTTCGAGCACGTAAACAGTGGGTGTTGCGGTACCGGTTATCTAGAAACGGCATTTATGTGTAATCCGGCTGCTTACGTATGTAGTGACGCATCTAAATATGTATTTTGGGATTCCATTCACCCCACTGAAATGACTTACTATCTCATCTTCAAATCCCTTCGTTCAGTCATTGATTATATCATTAAAGATTGA MFLGMETSMNILHPNLVLFFLRTFIFLLRASAESSLAEPRAPVNSVQAIFVFGDSTSDPGNNNYIRTPFKSDFAPYGRDLPDHVATGRFSNGRLSTDFIARYVGIKELVPPYLNSSLSIEELMTGVSFASAGSGYDPLTPTLSGVIPMSKQMDNFMQYKSRIAGTIGQEKTTELISKSVFIVSAGTNDFVVNYFTVPIRKKMYTIPQYQHFLVQNVHQFIKNLWDQGARKIAVVGVPPMGCLPIVITMASNNSISRRGCIESLSSVATDYNQLLQVNLKSLELSLQDQHTKIAYIDVYSPLHDMIQFARNSNYGFEHVNSGCCGTGYLETAFMCNPAAYVCSDASKYVFWDSIHPTEMTYYLIFKSLRSVIDYIIKD Relationships
The following mRNA feature(s) are a part of this gene:
Homology
BLAST of Spo15041.1 vs. NCBI nr
Match: gi|731350156|ref|XP_010686362.1| (PREDICTED: GDSL esterase/lipase At5g45960-like [Beta vulgaris subsp. vulgaris]) HSP 1 Score: 585.1 bits (1507), Expect = 8.700e-164 Identity = 288/381 (75.59%), Postives = 332/381 (87.14%), Query Frame = 1
BLAST of Spo15041.1 vs. NCBI nr
Match: gi|902226829|gb|KNA20504.1| (hypothetical protein SOVF_051070, partial [Spinacia oleracea]) HSP 1 Score: 558.9 bits (1439), Expect = 6.700e-156 Identity = 277/277 (100.00%), Postives = 277/277 (100.00%), Query Frame = 1
BLAST of Spo15041.1 vs. NCBI nr
Match: gi|661898729|emb|CDO96723.1| (unnamed protein product [Coffea canephora]) HSP 1 Score: 444.5 bits (1142), Expect = 1.800e-121 Identity = 213/362 (58.84%), Postives = 281/362 (77.62%), Query Frame = 1
BLAST of Spo15041.1 vs. NCBI nr
Match: gi|702318352|ref|XP_010052243.1| (PREDICTED: GDSL esterase/lipase At5g45960-like isoform X1 [Eucalyptus grandis]) HSP 1 Score: 436.0 bits (1120), Expect = 6.500e-119 Identity = 209/365 (57.26%), Postives = 273/365 (74.79%), Query Frame = 1
BLAST of Spo15041.1 vs. NCBI nr
Match: gi|297740456|emb|CBI30638.3| (unnamed protein product [Vitis vinifera]) HSP 1 Score: 433.0 bits (1112), Expect = 5.500e-118 Identity = 209/360 (58.06%), Postives = 275/360 (76.39%), Query Frame = 1
BLAST of Spo15041.1 vs. UniProtKB/TrEMBL
Match: A0A0J8ENL0_BETVU (Uncharacterized protein OS=Beta vulgaris subsp. vulgaris GN=BVRB_8g182190 PE=4 SV=1) HSP 1 Score: 585.1 bits (1507), Expect = 6.100e-164 Identity = 288/381 (75.59%), Postives = 332/381 (87.14%), Query Frame = 1
BLAST of Spo15041.1 vs. UniProtKB/TrEMBL
Match: A0A0K9RNL1_SPIOL (Uncharacterized protein (Fragment) OS=Spinacia oleracea GN=SOVF_051070 PE=4 SV=1) HSP 1 Score: 558.9 bits (1439), Expect = 4.700e-156 Identity = 277/277 (100.00%), Postives = 277/277 (100.00%), Query Frame = 1
BLAST of Spo15041.1 vs. UniProtKB/TrEMBL
Match: A0A068TN09_COFCA (Uncharacterized protein OS=Coffea canephora GN=GSCOC_T00013834001 PE=4 SV=1) HSP 1 Score: 444.5 bits (1142), Expect = 1.300e-121 Identity = 213/362 (58.84%), Postives = 281/362 (77.62%), Query Frame = 1
BLAST of Spo15041.1 vs. UniProtKB/TrEMBL
Match: A0A059CD57_EUCGR (Uncharacterized protein OS=Eucalyptus grandis GN=EUGRSUZ_D00575 PE=4 SV=1) HSP 1 Score: 436.0 bits (1120), Expect = 4.600e-119 Identity = 209/365 (57.26%), Postives = 273/365 (74.79%), Query Frame = 1
BLAST of Spo15041.1 vs. UniProtKB/TrEMBL
Match: D7TJG6_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_10s0003g00600 PE=4 SV=1) HSP 1 Score: 433.0 bits (1112), Expect = 3.900e-118 Identity = 209/360 (58.06%), Postives = 275/360 (76.39%), Query Frame = 1
BLAST of Spo15041.1 vs. ExPASy Swiss-Prot
Match: GDL86_ARATH (GDSL esterase/lipase At5g45960 OS=Arabidopsis thaliana GN=At5g45960 PE=2 SV=1) HSP 1 Score: 402.9 bits (1034), Expect = 3.800e-111 Identity = 195/363 (53.72%), Postives = 266/363 (73.28%), Query Frame = 1
BLAST of Spo15041.1 vs. ExPASy Swiss-Prot
Match: GDL1_ARATH (GDSL esterase/lipase At1g06990 OS=Arabidopsis thaliana GN=At1g06990 PE=2 SV=2) HSP 1 Score: 295.0 bits (754), Expect = 1.100e-78 Identity = 146/333 (43.84%), Postives = 214/333 (64.26%), Query Frame = 1
BLAST of Spo15041.1 vs. ExPASy Swiss-Prot
Match: GDL42_ARATH (GDSL esterase/lipase At2g30310 OS=Arabidopsis thaliana GN=At2g30310 PE=2 SV=1) HSP 1 Score: 290.4 bits (742), Expect = 2.800e-77 Identity = 148/318 (46.54%), Postives = 205/318 (64.47%), Query Frame = 1
BLAST of Spo15041.1 vs. ExPASy Swiss-Prot
Match: GDL44_ARATH (GDSL esterase/lipase At2g31550 OS=Arabidopsis thaliana GN=At2g31550 PE=3 SV=3) HSP 1 Score: 288.9 bits (738), Expect = 8.100e-77 Identity = 161/369 (43.63%), Postives = 230/369 (62.33%), Query Frame = 1
BLAST of Spo15041.1 vs. ExPASy Swiss-Prot
Match: GDL43_ARATH (GDSL esterase/lipase At2g31540 OS=Arabidopsis thaliana GN=At2g31540 PE=2 SV=1) HSP 1 Score: 288.5 bits (737), Expect = 1.100e-76 Identity = 161/369 (43.63%), Postives = 230/369 (62.33%), Query Frame = 1
BLAST of Spo15041.1 vs. TAIR (Arabidopsis)
Match: AT5G45960.1 (GDSL-like Lipase/Acylhydrolase superfamily protein) HSP 1 Score: 402.9 bits (1034), Expect = 2.200e-112 Identity = 195/363 (53.72%), Postives = 266/363 (73.28%), Query Frame = 1
BLAST of Spo15041.1 vs. TAIR (Arabidopsis)
Match: AT1G06990.1 (GDSL-like Lipase/Acylhydrolase superfamily protein) HSP 1 Score: 295.0 bits (754), Expect = 6.400e-80 Identity = 146/333 (43.84%), Postives = 214/333 (64.26%), Query Frame = 1
BLAST of Spo15041.1 vs. TAIR (Arabidopsis)
Match: AT2G30310.1 (GDSL-like Lipase/Acylhydrolase family protein) HSP 1 Score: 290.4 bits (742), Expect = 1.600e-78 Identity = 148/318 (46.54%), Postives = 205/318 (64.47%), Query Frame = 1
BLAST of Spo15041.1 vs. TAIR (Arabidopsis)
Match: AT2G31540.1 (GDSL-like Lipase/Acylhydrolase superfamily protein) HSP 1 Score: 288.5 bits (737), Expect = 6.000e-78 Identity = 161/369 (43.63%), Postives = 230/369 (62.33%), Query Frame = 1
BLAST of Spo15041.1 vs. TAIR (Arabidopsis)
Match: AT1G58430.1 (GDSL-like Lipase/Acylhydrolase family protein) HSP 1 Score: 284.6 bits (727), Expect = 8.600e-77 Identity = 153/351 (43.59%), Postives = 223/351 (63.53%), Query Frame = 1
The following BLAST results are available for this feature:
BLAST of Spo15041.1 vs. NCBI nr
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. NCBI nr) Total hits: 5
BLAST of Spo15041.1 vs. UniProtKB/TrEMBL
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. UniprotKB/TrEMBL) Total hits: 5
BLAST of Spo15041.1 vs. ExPASy Swiss-Prot
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. ExPASy SwissProt) Total hits: 5
BLAST of Spo15041.1 vs. TAIR (Arabidopsis)
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. TAIR) Total hits: 5
InterPro
Analysis Name: InterPro Annotations of S. oleracea
Date Performed: 2018-06-29
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
RNA-Seq Expression
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