Spo24141 (gene) | SpinachBase

Overview


Name	Spo24141
Type	gene
Organism	Spinacia oleracea (Spinach)
Description	Thioredoxin family protein
Location	Super_scaffold_113 : 1957977 .. 1965190 (-)

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonpolypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

CCTAATTTGGCAACCACAATACGCCACGTCGAAATTTGAAGGTGGAATTCTCACAAAATGAGTGAAATCCAATAGTTCGTCCCACTCCCACATTTCCGTGGACAACCGACAGCAGCCACAAAACCCGATTAACTGATTTCTTCACCGGAGAATCATGGCAGGAGCTCTAACTTTTGCCTCAATCCCAATTCTTCGGCCACTTTCCTGCCGTAAAATGCCGAAAAATTCATTTCGAATTAGGGCTTCGACGGAAATCTCAGAACCAACAGTAGAGTCAAGTTCTCAAGGGAGTTCCGATGCTAGAGTTTCGACATCGAAACCTACTTTCTCGGCGCCGCCGAATTTCAAGGCGCCGGAGCCGAAGCGATTCGGTATCAGACCGGATAGGACTCTTGATATTCTTGGGGCTTCTCTTTCTCTCATCTTCCGATTGGGTACCGGCGTCTTTGCTGATGGGTAAATCCCATTTTTCTTCTCAAGTACTCTCTTTTATGCTTATTTGTAATTTCTGAGGTAATTAGATTGATTGCATTTTGTGCTCTTTAGGGGTCTTGTTTAATTATTGGTTGTTTGTATGGAAATGGTTTGAGATTTTGCAATTTGTATTTTGGATGCATTGTTTGACTACACATGCTTATGTTAACGTAGGAAATATCCCTGAAAATCGATGTAGTGGTTGATAAAACATAGGAATTGCAATCTTTTGAAGATTTGTATGATTAAACATTGTTTTGACTCAATACTTGTCAAATAGAATGACTGAAACCGGGCTCGGTCAGTATCTGACTCTGGCTTTCACACACTGTTGGAACATATGGAGCTTATATGTTATGGTGGTTCTAAGATTTAAAATACTTGTATTACTCTTTAACAGGTATTCAGTGTCCCTTGTGTCAAAGGATGAAATCCCATCTGACCAATATGCTCTGGAGTTCGCTGGTAATATATTTGTTCAACTCCTTCATTTAATTAAGGTGTGCTTTCCATAAGACTTTACGAGATCCCCCTGCCTTCTCATTGTCCTTGCATGTGTTGTCCTACCTTTTTCTTCTCTGTGGGGGTCAGGTTCTTTTCGAATTTTTTGTAAGTAACCCACTAGAACATGTTGCAAAAAGAGTATTGAAATTTGAATAAAAACGTCTCTGATAAAGAAAATGTAAAGGGTGTTTGTAGATTTTTTATGTTATTTCAACTTTTTGTTTAACTATATGAGAGAATCTTCTGTAACAAAATTATCATGCATCGATTTTTTTCTGTCTTAAGAGCTTGGCTTTTGATAATTGATATCAAAGTCTGTACTTGTATTTAAAGTCCTAGTTTTAGTTCATGATACTGATTTGGTTTAGATTTCTTGAAAAATAATGGTTATAGCCACTATTCAAAGCAGTTGCACGACTCGCACCAGATGCTTGCGCTTCAATTGGACTTTATGTTCTTTGTCCCTGTTCAGTATCTTTAGTATCATACTATGCATAGGTAGTCCTGTTAGCAAGATGCTGCATTCAAAATGCAAAACTTGACCGGCTCACTTAAAGAAATAGATTTTCACATGCTTGCATTGGTTAGAATTAGAATTTTGAACTCTGTCTCTTCTTGCGAATTTATTTATTTTTTCTTAACTGTCGTTTTGTAATTTTAGAAGGAATATGAACCATATGTGATTTTCTTGTTGAATTTTCTACATTTTCTGTACTGTGTACAATTACGCAATATTCAACTAAATCTGTCTTTCCACATAGGGGCTTTAGATGCCTACATGTGCTGGATAAAACGGCCGATTTCTCCGTAGTGTGTGATTCGCTAATTTACTGCTTGCCCTTGTTCTATTTTATTTTATTAAGGTTTTAAATTGAAGGAGAGCTCAAAGTTAGGTCCACGTCCTGAAAAGCCTATTGAGATATATGAATTTGAAAGGTAGTGAAACTGAACTGCTTTTCATTCCTTCTTTGATTGTTGGTGTTTGAGGGGTAATGGCCAACATGTGGCGTCTTTCTTTAGCACAGCCTTTTACAGCTTATTGGCAATTTGACTAACTACTTTGCTCCTTTTGCATCACTGTACTTGGCCTCCAACGTACCCGAATATATCAGTTGTCCCTTCTGCCGAAAGGTATTATTAATCTGTTGAAGTATTACAGTTTATATGTGGGGTGTGACTGATGCATGAGTTTTTCGTGCATTCATTTTGCATACCTCTCCTAGGATCTTCCATACAGCTGATCTTCCGATGTATTAACAGGTCAGGGAAATTGTAGCAGTGTTGGATATTGATGTCTTGTACTATCCATGTCCTAGAAACGGGCCAAACTTCCGTCCGAAAGCAGCTCAGATGGGTGGCAAGAAGATGTTCCCTTACATGGTTTGACAGTATACCCCATCGATTCTTATGTCGCACAACTCTAAATGAAAACCATATTCTTCTGTAGTAACCTTTATCACTATTGGTTTCTTAACACTGTGGCAAACTCTTCAAGTTAGAAATTCTTTTGTTTGTAATCAGATTCAATTTTAGGTCAAGCGAAAGAAGAGTTATAATAAACTTTACAGTCTTAGGAGTTGAGTTACCCCCCAGAAGTTTAGGATATGTCTTCTGCAGTTTATTTTGGGACATATTTAACTTGGGAACCCTTTAATTTTGCAGTTGTTATGCGTTGGACCAAATTTTTTTGAGTTTTATGAAATAACCTTAATGTTATGTTTCAGATAAAATCATAACCTTAAAAATGGTTGATGCCGTTAAATTAAGTGGTGATGTAGCCCCTCCCAGCCCCCAAGACTCAATAGCAACCACCATCACTAATAGCCTCCAGCTTCGCCAACAGCTCAGCCTTTGCCCTTCTTCCTCTGCCACACTCACCTTACTGATGCCGTTGGCAACTGAGGACTGAAGGTAATTCCATGCCAATTGCCAACCCCTATGTTACTTCAACATGACATGACACGTTGGTTGACAGACGGTGTCGGAGCCACCAACACTTCAACATGACATGACACCCAAATGTATAGTGGCCTAGTATGAAATTTAATACATCTTGAGTGTCAGAGGAGTAACATAGGCCAACCCTTTCACCTCCCTGAACTTGGAATTGCCACACCAACTCGAAATTGACTCACTTCCCAGCATCCTGATTTCTGACCACCACCACCACTCTATCATAAGATCTCTACAAACCCCACCATATGAAGTTATGAACACCTTAACCACCGTGGCACCACCATTCTGCCCAACCCAGAATCAACCACTAAATAATTCCACAAGCCCTTCCATGAGAACTGGCAAAACCACAGGAAAGCCTCTGAAACCGACTTAGAAACGTAAAGAGGACAAAGCACCATAAATGTTGAACGAAAGAAAGAGAGAATGAAAAATACCGAGTCTCAATGGAGCTTAGAAAAATTCAAGTTTGACCATGAAAAATTCAAGTTTGACATTTGTGAGATACTTCATTCCTGCCGAAGACAAGAATGGGTAGGATAATGGTGGACCTTGGTGGCTGTTACAGGAGGTGGAGGGAGCGGCGGGTGTTGCTAAGGGGATGTTGGTGTCTTTGGGGGCTGTTGGATAGCGGCCTGTTCTTGTCAGTGGTAACTGGTTGTGGAGGTGATGGTAGAGGCTGTTGTTGACCGCGATGACTGTTGGATGGGGTGGGGAGGGACCATTTCACCACTTAACCGGCGTCAACCATTTCAGGTTATTGTTTTCTCTAGACCATATATATGAGGAAACTGGTGAAATTCAAAAGTCAATTGGTCCACTGTTTTAAATTGTAAAAACAGAGTTAGGCTTTCCCCTTCTTTAAATATTATTTACTTTTCAAGGTCATCCAAGATACAGCATATAGGTGCCAAACTTTAGTGTTAAAAGTGTATCGCGTAATCAATAAATCAATGTAAATCGAGTTATGGGGGCATAGGCCACTATGTTGATGTCGATTAGTGTAGATTTTCTTTAGCACTCTTGAAGTCTTCACCATATTTTTATGCACTCCATCAAGTCAGTGGATATGATAAAAATTATTTATTGTCCTGGACTATTCAGAAAAGGCTCATGAAAAGCATTACTGGTTATAGGATATTATCATATTAGCAAATAATTTTTTTTTTTCCATTTTGTAATTTGGTGCAACACTTCAAGCTCTCTATTGACAATCTTTATGATATAAGAAACCATAATTTTGCGTCTTCTTTCTACTAGGGTTCCTTTGGTCCATACCCTAGTATTTTATAAGGGAGGGTTGTGTGAGGAAGACATTTTCTGTTACAAACTTAGAACCTCTTTCTGTTGATGACAAGTATAATTTTGTAAGTTGACCTAAGGGCGTAGTTTAGTATTATGAGTACTTAATGAGTCTCACTACTGGACTGTGGCGTGTTCCAATCCCTTAGTCTCCAATTATGGGATTTGTTACCTCTTATCTCCTTGATAATGATTATGTTAAGATTTCTTCTTTAGATATGCTTGAATAAAAGAAATTAACACCAGTTTGTTGATTGCAGGTGGATCCAAACACTGGAGTGGCTATGTACGAATCAAATGATATTATTAAGTATTTGGTTAACAAATATGGTTTCTCATCTTCACCCTTCTCTTAGTCTTAATTTCTTGATTTCATTTGTCTTTATTGTATGCTAAGCCGATTGATTAACTCTGGTCATTCCCTTACATATGGTTCTACATTGTTTTCCTTATTTGTGGCCCATAAAGTTCGGTTATTTTTATTTATTTCACTTCGACTTCTTCTACCATTATCATGCTTTGATCATCAGATTTTAGCTTGACATTTTGGTTATCCGGTATTTTTCAAGTCCGAGAAGTGATACATTGGCGCCTGGCGGAGTTTTACTTGTAGTTTTAACTACCATGCTATATCTTCTTCAAATGACATAAACCTCAACACATTCACTGTTAGAAGAACAAGTTTGCAGTTAATCAAATAAATTTAACTGAGACGGAGATAATAAAAGAAAATATATGAATATATTATACTTTTGGCTCAAATTTCTGCTTCGCCCAGTGACGGATTTTAATTTTTTGTTGGTAGTATGAGTAGAATTGTCATGTGGAACATACCGGTTAGGTGACAGCTTAACATCAGTTAGGATACTAGGTCGCATATAATTCAAATTACACTCTTAAGCCATTATGCTTTCTTTCTAAATTATCTGGTTGTGTTTCTTTGGTATTTTGCGTAATATGTTAAAAGTATTTGCTGGGAAATCAGAAGCATTACGAGTTACAACTTTGTAGTACCTTGAAAAGCTTTCCTCTAATTTATAATGATGAAATAAGCAACACGAACTGTATTGAAATATGTACGAAGTACTAATCTAGACTATATGCATAAGTAGGCGTAACTAGGTTGAAGAAATTCGGAGATAAAGAAATATGTCTGTTAATTGATAGGGTCGACTTTAAATTTGCTGGAAGTCAATTCTATTTACTTGTATTATCTATCATCAATAAACAGTAATGTTGTATACTCCGTATTTGCTTTTACAGAAAGAGCCCCCCTCTCTGTTGGTAAGTGAAAAATTATATATAGCTGATCCTTAGACGTTGTGAGGCACAAGTCTCATTCAACCAATTTACATTAGTTATTGAACAGCCACTTGCATTCTGCTATCCAGTCAGAAGATAATTTAACAAACATTTCAAATCCCCAAAACCTTTGATATATGAAGCCTTATCTTGCTATAACGAAGAGGCCTTATTGAACTATTTGAAACGTGTATTGTTTGCAGAATAAAAGAAGTACCAGATGTTTTGTCATTTCAATAGGTTACTTGTAGAAGTAGGTCATTGACTGTACTTTTCTGAAGTAGCTTACGGCATTGACTTCTGATTAAGAGTCGTTAAGAAATAGCCTATTTATTATAGTAAATAAGGTTACTGATACATGACCTTCTCTACCTTGCCATGGGAAACTGCCTTTTTTTGGTGACGTTGAGGTTATACCTGTCTTCAATTGAACAACATAGCCATATATAAGATGCTTATACACAGGACTGGTATACTATTATCCCAACGGCTCTCTTCAAGGTTTTTTTCCTATGTAGGTTCCAGGGTTTTTTTTTATATTTTTGCAACCAAACCTTTGCAACGAAGAGATTATGCTCACTACTTAAATGCTCCCCAAGTAATTAACATAGTTCGACATTGGAGTTTATGATGAGCATATTCTACTAAATAGCCCTTTGTTTGCTTTGTTAGTTATCCGTCAACAAAAGTTCCATTAATCAGTTGTTCATCTTAAACTTTACTAGGTAGTTTGATTGTTAAGAGAAGCAGTACAATTTTTATAAATCTCATCAATCAGTTATTTTTCCAAAACTGCCAACTCCTGGCTTACAAATAACTTCTGAAGAGTGTAGTTTGAATTATTATTAATGTTTTGGTGAATGTTAATCTAAATAATATTCTTCTTTCCCTCCCTTGCCTCTTAACTATTCCAATCGTTTGAGTTTCCATCATCTGAGAAATCGAAAAAGTTTTTATGTGATACAAGCATGCTCCAGGCTTCGAGTCACATCTTAGTAAAATGACTTGATCACACTTTAGAGATGTCAGATATCATGCATTTCCTAGATAAAGTTTCTCTCCCATGAATATGCAATTTACAATCTACTGTGACTTATATACTTCCCTGGTGGTCCTGGACATAATTTTTGACTTTGAGGTCCTTTATGCAGGTGATGGTCAAGTCCCTCTTTTGTTGTCGCTAGGTCTACTAACGGTTAGTATCTCTATTGTTTTGAATACAACATTTAAAACACTTTTTAACACTTTTTAACTCTTTATCCGACTTTGTTGGCTTATCTAGACCTTAACTGAAGGATTTGCAATGATTGGTCGTATGGGCAGAGTAAGTCTCACTCAGCATAATCATATTCTGACTGCGAAATACCTTCGACTGCTGACATCACTAACTGTTACGTGTTCTTCCTTTCCAATTTCCGTTGCCCAGGGGCAGTCTTATACTCCAGCAAAAATGCCACCTAAGCCGCTTGTATTCTGGGCTTATGAGGTTTTACTCGTCAAACTTTAATATCCTTCCCGTTGTCTTTGCCTACGCTTCCACATCAAATTATATGGAATCTTTACTACCATGCGTATTACTTCAGGGTTCTCCCTTCTGCAAAGTTGTTCGTGAGGTGCTTGTGGAATTGGAGTTGCCACACATCCAGCGCAGGTTCTTTGTGGAAAAATTCTTTTAA

mRNA sequence

CCTAATTTGGCAACCACAATACGCCACGTCGAAATTTGAAGGTGGAATTCTCACAAAATGAGTGAAATCCAATAGTTCGTCCCACTCCCACATTTCCGTGGACAACCGACAGCAGCCACAAAACCCGATTAACTGATTTCTTCACCGGAGAATCATGGCAGGAGCTCTAACTTTTGCCTCAATCCCAATTCTTCGGCCACTTTCCTGCCGTAAAATGCCGAAAAATTCATTTCGAATTAGGGCTTCGACGGAAATCTCAGAACCAACAGTAGAGTCAAGTTCTCAAGGGAGTTCCGATGCTAGAGTTTCGACATCGAAACCTACTTTCTCGGCGCCGCCGAATTTCAAGGCGCCGGAGCCGAAGCGATTCGGTATCAGACCGGATAGGACTCTTGATATTCTTGGGGCTTCTCTTTCTCTCATCTTCCGATTGGGTACCGGCGTCTTTGCTGATGGGTATTCAGTGTCCCTTGTGTCAAAGGATGAAATCCCATCTGACCAATATGCTCTGGAGTTCGCTGGTTTTAAATTGAAGGAGAGCTCAAAGTTAGGTCCACGTCCTGAAAAGCCTATTGAGATATATGAATTTGAAAGCCTTTTACAGCTTATTGGCAATTTGACTAACTACTTTGCTCCTTTTGCATCACTGTACTTGGCCTCCAACGTACCCGAATATATCAGTTGTCCCTTCTGCCGAAAGGTCAGGGAAATTGTAGCAGTGTTGGATATTGATGTCTTGTACTATCCATGTCCTAGAAACGGGCCAAACTTCCGTCCGAAAGCAGCTCAGATGGGTGGCAAGAAGATGTTCCCTTACATGGTGGATCCAAACACTGGAGTGGCTATGTACGAATCAAATGATATTATTAAGTATTTGGTTAACAAATATGGGTCGACTTTAAATTTGCTGGAAGTCAATTCTATTTACTTGTATTATCTATCATCAATAAACAGTAATGTTGTATACTCCGTATTTGCTTTTACAGAAAGAGCCCCCCTCTCTGTTGGTGATGGTCAAGTCCCTCTTTTGTTGTCGCTAGGTCTACTAACGACCTTAACTGAAGGATTTGCAATGATTGGTCGTATGGGCAGAGTAAGTCTCACTCAGCATAATCATATTCTGACTGCGAAATACCTTCGACTGCTGACATCACTAACTGTTACGTGTTCTTCCTTTCCAATTTCCGTTGCCCAGGGGCAGTCTTATACTCCAGCAAAAATGCCACCTAAGCCGCTTGTATTCTGGGCTTATGAGGGTTCTCCCTTCTGCAAAGTTGTTCGTGAGGTGCTTGTGGAATTGGAGTTGCCACACATCCAGCGCAGGTTCTTTGTGGAAAAATTCTTTTAA

Coding sequence (CDS)

ATGGCAGGAGCTCTAACTTTTGCCTCAATCCCAATTCTTCGGCCACTTTCCTGCCGTAAAATGCCGAAAAATTCATTTCGAATTAGGGCTTCGACGGAAATCTCAGAACCAACAGTAGAGTCAAGTTCTCAAGGGAGTTCCGATGCTAGAGTTTCGACATCGAAACCTACTTTCTCGGCGCCGCCGAATTTCAAGGCGCCGGAGCCGAAGCGATTCGGTATCAGACCGGATAGGACTCTTGATATTCTTGGGGCTTCTCTTTCTCTCATCTTCCGATTGGGTACCGGCGTCTTTGCTGATGGGTATTCAGTGTCCCTTGTGTCAAAGGATGAAATCCCATCTGACCAATATGCTCTGGAGTTCGCTGGTTTTAAATTGAAGGAGAGCTCAAAGTTAGGTCCACGTCCTGAAAAGCCTATTGAGATATATGAATTTGAAAGCCTTTTACAGCTTATTGGCAATTTGACTAACTACTTTGCTCCTTTTGCATCACTGTACTTGGCCTCCAACGTACCCGAATATATCAGTTGTCCCTTCTGCCGAAAGGTCAGGGAAATTGTAGCAGTGTTGGATATTGATGTCTTGTACTATCCATGTCCTAGAAACGGGCCAAACTTCCGTCCGAAAGCAGCTCAGATGGGTGGCAAGAAGATGTTCCCTTACATGGTGGATCCAAACACTGGAGTGGCTATGTACGAATCAAATGATATTATTAAGTATTTGGTTAACAAATATGGGTCGACTTTAAATTTGCTGGAAGTCAATTCTATTTACTTGTATTATCTATCATCAATAAACAGTAATGTTGTATACTCCGTATTTGCTTTTACAGAAAGAGCCCCCCTCTCTGTTGGTGATGGTCAAGTCCCTCTTTTGTTGTCGCTAGGTCTACTAACGACCTTAACTGAAGGATTTGCAATGATTGGTCGTATGGGCAGAGTAAGTCTCACTCAGCATAATCATATTCTGACTGCGAAATACCTTCGACTGCTGACATCACTAACTGTTACGTGTTCTTCCTTTCCAATTTCCGTTGCCCAGGGGCAGTCTTATACTCCAGCAAAAATGCCACCTAAGCCGCTTGTATTCTGGGCTTATGAGGGTTCTCCCTTCTGCAAAGTTGTTCGTGAGGTGCTTGTGGAATTGGAGTTGCCACACATCCAGCGCAGGTTCTTTGTGGAAAAATTCTTTTAA

Protein sequence

MAGALTFASIPILRPLSCRKMPKNSFRIRASTEISEPTVESSSQGSSDARVSTSKPTFSAPPNFKAPEPKRFGIRPDRTLDILGASLSLIFRLGTGVFADGYSVSLVSKDEIPSDQYALEFAGFKLKESSKLGPRPEKPIEIYEFESLLQLIGNLTNYFAPFASLYLASNVPEYISCPFCRKVREIVAVLDIDVLYYPCPRNGPNFRPKAAQMGGKKMFPYMVDPNTGVAMYESNDIIKYLVNKYGSTLNLLEVNSIYLYYLSSINSNVVYSVFAFTERAPLSVGDGQVPLLLSLGLLTTLTEGFAMIGRMGRVSLTQHNHILTAKYLRLLTSLTVTCSSFPISVAQGQSYTPAKMPPKPLVFWAYEGSPFCKVVREVLVELELPHIQRRFFVEKFF

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Spo24141.1	Spo24141.1	mRNA

Homology

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BLAST of Spo24141.1 vs. NCBI nr
Match: gi|902198348|gb|KNA13643.1| (hypothetical protein SOVF_114820 [Spinacia oleracea])

HSP 1 Score: 421.4 bits (1082), Expect = 1.800e-114
Identity = 217/246 (88.21%), Postives = 217/246 (88.21%), Query Frame = 1

		  
Query: 1   MAGALTFASIPILRPLSCRKMPKNSFRIRASTEISEPTVESSSQGSSDARVSTSKPTFSA 60
           MAGALTFASIPILRPLSCRKMPKNSFRIRASTEISEPTVESSSQGSSDARVSTSKPTFSA
Sbjct: 1   MAGALTFASIPILRPLSCRKMPKNSFRIRASTEISEPTVESSSQGSSDARVSTSKPTFSA 60

Query: 61  PPNFKAPEPKRFGIRPDRTLDILGASLSLIFRLGTGVFADGYSVSLVSKDEIPSDQYALE 120
           PPNFKAPEPKRFGIRPDRTLDILGASLSLIFRLGTGVFADGYSVSLVSKDEIPSDQYALE
Sbjct: 61  PPNFKAPEPKRFGIRPDRTLDILGASLSLIFRLGTGVFADGYSVSLVSKDEIPSDQYALE 120

Query: 121 FAGFKLKESSKLGPRPEKPIEIYEFESLLQLIGNLTNYFAPFASLYLASNVPEYISCPFC 180
           FAGFKLKESSKLGPRPEKPIEIYEFE                             SCPFC
Sbjct: 121 FAGFKLKESSKLGPRPEKPIEIYEFE-----------------------------SCPFC 180

Query: 181 RKVREIVAVLDIDVLYYPCPRNGPNFRPKAAQMGGKKMFPYMVDPNTGVAMYESNDIIKY 240
           RKVREIVAVLDIDVLYYPCPRNGPNFRPKAAQMGGKKMFPYMVDPNTGVAMYESNDIIKY
Sbjct: 181 RKVREIVAVLDIDVLYYPCPRNGPNFRPKAAQMGGKKMFPYMVDPNTGVAMYESNDIIKY 217

Query: 241 LVNKYG 247
           LVNKYG
Sbjct: 241 LVNKYG 217

[Close]

BLAST of Spo24141.1 vs. NCBI nr
Match: gi|731345058|ref|XP_010683726.1| (PREDICTED: uncharacterized protein LOC104898359 [Beta vulgaris subsp. vulgaris])

HSP 1 Score: 373.2 bits (957), Expect = 5.500e-100
Identity = 190/246 (77.24%), Postives = 199/246 (80.89%), Query Frame = 1

		  
Query: 1   MAGALTFASIPILRPLSCRKMPKNSFRIRASTEISEPTVESSSQGSSDARVSTSKPTFSA 60
           MAG L +A IPILRPL+CRKMP  SFRIRASTEISEPTV     G  DAR+STS P FSA
Sbjct: 1   MAGVLNYAQIPILRPLTCRKMPNKSFRIRASTEISEPTV-----GDLDARISTSSPNFSA 60

Query: 61  PPNFKAPEPKRFGIRPDRTLDILGASLSLIFRLGTGVFADGYSVSLVSKDEIPSDQYALE 120
           P NFK PEPKRFGIRPDRT DILGASLSL+FRLGTGVFADGYSVS+VSK+EIPSDQYALE
Sbjct: 61  PANFKPPEPKRFGIRPDRTFDILGASLSLVFRLGTGVFADGYSVSIVSKEEIPSDQYALE 120

Query: 121 FAGFKLKESSKLGPRPEKPIEIYEFESLLQLIGNLTNYFAPFASLYLASNVPEYISCPFC 180
           FAGFKLKESSKLGPRPEKPIEIYEFE                             SCPFC
Sbjct: 121 FAGFKLKESSKLGPRPEKPIEIYEFE-----------------------------SCPFC 180

Query: 181 RKVREIVAVLDIDVLYYPCPRNGPNFRPKAAQMGGKKMFPYMVDPNTGVAMYESNDIIKY 240
           RKVREIVAVLD+DVLYYPCPRNGPNFRPKA+QMGGKK FPYMVDPNTGVAMYES+DIIKY
Sbjct: 181 RKVREIVAVLDLDVLYYPCPRNGPNFRPKASQMGGKKQFPYMVDPNTGVAMYESDDIIKY 212

Query: 241 LVNKYG 247
           LVNKYG
Sbjct: 241 LVNKYG 212

[Close]

BLAST of Spo24141.1 vs. NCBI nr
Match: gi|567875199|ref|XP_006430189.1| (hypothetical protein CICLE_v10012144mg [Citrus clementina])

HSP 1 Score: 300.8 bits (769), Expect = 3.500e-78
Identity = 152/247 (61.54%), Postives = 176/247 (71.26%), Query Frame = 1

		  
Query: 1   MAGALTFASIPILRPLS-CRKMPKNSFRIRASTEISEPTVESSSQGSSDARVSTSKPTFS 60
           MAG L F+   + RPLS  R++P+ SF IRA++E S+     SS  ++  +       F+
Sbjct: 1   MAGVLNFSQPSLFRPLSGSRQIPRTSFSIRATSESSKTPQTPSSSSTTSTQEKPEPTPFA 60

Query: 61  APPNFKAPEPKRFGIRPDRTLDILGASLSLIFRLGTGVFADGYSVSLVSKDEIPSDQYAL 120
           APPNFK PEPKRF +RPD+ LDILGA+L+L FR GTGVF  GYS S VSKDEIP DQYA+
Sbjct: 61  APPNFKPPEPKRFAVRPDKALDILGAALALFFRFGTGVFVSGYSASFVSKDEIPPDQYAM 120

Query: 121 EFAGFKLKESSKLGPRPEKPIEIYEFESLLQLIGNLTNYFAPFASLYLASNVPEYISCPF 180
           E AGFK+KE+SKLGPRPEKPIEIYE+E                             SCPF
Sbjct: 121 EIAGFKVKETSKLGPRPEKPIEIYEYE-----------------------------SCPF 180

Query: 181 CRKVREIVAVLDIDVLYYPCPRNGPNFRPKAAQMGGKKMFPYMVDPNTGVAMYESNDIIK 240
           CRKVREIVAVLD+DVLYYPCPRNGPNFRPK  QMGGKK FPYMVDPNTGV+MYES++IIK
Sbjct: 181 CRKVREIVAVLDLDVLYYPCPRNGPNFRPKVLQMGGKKQFPYMVDPNTGVSMYESDNIIK 218

Query: 241 YLVNKYG 247
           YLV KYG
Sbjct: 241 YLVGKYG 218

[Close]

BLAST of Spo24141.1 vs. NCBI nr
Match: gi|641851559|gb|KDO70429.1| (hypothetical protein CISIN_1g019711mg [Citrus sinensis])

HSP 1 Score: 300.1 bits (767), Expect = 5.900e-78
Identity = 152/247 (61.54%), Postives = 175/247 (70.85%), Query Frame = 1

		  
Query: 1   MAGALTFASIPILRPLS-CRKMPKNSFRIRASTEISEPTVESSSQGSSDARVSTSKPTFS 60
           MAG L F+   + RPLS  R++P+ SF IRA++E S+     SS  ++  +       F+
Sbjct: 1   MAGVLNFSQPSLFRPLSGSRQIPRTSFSIRATSESSKTPQTPSSSSTTSTQEKPEPTPFA 60

Query: 61  APPNFKAPEPKRFGIRPDRTLDILGASLSLIFRLGTGVFADGYSVSLVSKDEIPSDQYAL 120
           APPNFK PEPKRF +RPD+ LDILGA+L+L FR GTGVF  GYS S VSKDEIP DQY L
Sbjct: 61  APPNFKPPEPKRFAVRPDKALDILGAALALFFRFGTGVFVSGYSASFVSKDEIPPDQYTL 120

Query: 121 EFAGFKLKESSKLGPRPEKPIEIYEFESLLQLIGNLTNYFAPFASLYLASNVPEYISCPF 180
           E AGFK+KE+SKLGPRPEKPIEIYE+E                             SCPF
Sbjct: 121 EIAGFKVKETSKLGPRPEKPIEIYEYE-----------------------------SCPF 180

Query: 181 CRKVREIVAVLDIDVLYYPCPRNGPNFRPKAAQMGGKKMFPYMVDPNTGVAMYESNDIIK 240
           CRKVREIVAVLD+DVLYYPCPRNGPNFRPK  QMGGKK FPYMVDPNTGV+MYES++IIK
Sbjct: 181 CRKVREIVAVLDLDVLYYPCPRNGPNFRPKVLQMGGKKQFPYMVDPNTGVSMYESDNIIK 218

Query: 241 YLVNKYG 247
           YLV KYG
Sbjct: 241 YLVGKYG 218

[Close]

BLAST of Spo24141.1 vs. NCBI nr
Match: gi|568856384|ref|XP_006481764.1| (PREDICTED: uncharacterized protein LOC102621296 [Citrus sinensis])

HSP 1 Score: 300.1 bits (767), Expect = 5.900e-78
Identity = 152/247 (61.54%), Postives = 175/247 (70.85%), Query Frame = 1

		  
Query: 1   MAGALTFASIPILRPLS-CRKMPKNSFRIRASTEISEPTVESSSQGSSDARVSTSKPTFS 60
           MAG L F+   + RPLS  R++P+ SF IRA++E S+     SS  ++  +       F+
Sbjct: 1   MAGVLNFSQPSLFRPLSGSRQIPRTSFSIRATSESSKTPQTPSSSSTTSTQEKLEPTPFA 60

Query: 61  APPNFKAPEPKRFGIRPDRTLDILGASLSLIFRLGTGVFADGYSVSLVSKDEIPSDQYAL 120
           APPNFK PEPKRF +RPD+ LDILGA+L+L FR GTGVF  GYS S VSKDEIP DQY L
Sbjct: 61  APPNFKPPEPKRFAVRPDKALDILGAALALFFRFGTGVFVSGYSASFVSKDEIPPDQYTL 120

Query: 121 EFAGFKLKESSKLGPRPEKPIEIYEFESLLQLIGNLTNYFAPFASLYLASNVPEYISCPF 180
           E AGFK+KE+SKLGPRPEKPIEIYE+E                             SCPF
Sbjct: 121 EIAGFKVKETSKLGPRPEKPIEIYEYE-----------------------------SCPF 180

Query: 181 CRKVREIVAVLDIDVLYYPCPRNGPNFRPKAAQMGGKKMFPYMVDPNTGVAMYESNDIIK 240
           CRKVREIVAVLD+DVLYYPCPRNGPNFRPK  QMGGKK FPYMVDPNTGV+MYES++IIK
Sbjct: 181 CRKVREIVAVLDLDVLYYPCPRNGPNFRPKVLQMGGKKQFPYMVDPNTGVSMYESDNIIK 218

Query: 241 YLVNKYG 247
           YLV KYG
Sbjct: 241 YLVGKYG 218

[Close]

BLAST of Spo24141.1 vs. UniProtKB/TrEMBL
Match: A0A0K9R2B5_SPIOL (Uncharacterized protein OS=Spinacia oleracea GN=SOVF_114820 PE=4 SV=1)

HSP 1 Score: 421.4 bits (1082), Expect = 1.200e-114
Identity = 217/246 (88.21%), Postives = 217/246 (88.21%), Query Frame = 1

		  
Query: 1   MAGALTFASIPILRPLSCRKMPKNSFRIRASTEISEPTVESSSQGSSDARVSTSKPTFSA 60
           MAGALTFASIPILRPLSCRKMPKNSFRIRASTEISEPTVESSSQGSSDARVSTSKPTFSA
Sbjct: 1   MAGALTFASIPILRPLSCRKMPKNSFRIRASTEISEPTVESSSQGSSDARVSTSKPTFSA 60

Query: 61  PPNFKAPEPKRFGIRPDRTLDILGASLSLIFRLGTGVFADGYSVSLVSKDEIPSDQYALE 120
           PPNFKAPEPKRFGIRPDRTLDILGASLSLIFRLGTGVFADGYSVSLVSKDEIPSDQYALE
Sbjct: 61  PPNFKAPEPKRFGIRPDRTLDILGASLSLIFRLGTGVFADGYSVSLVSKDEIPSDQYALE 120

Query: 121 FAGFKLKESSKLGPRPEKPIEIYEFESLLQLIGNLTNYFAPFASLYLASNVPEYISCPFC 180
           FAGFKLKESSKLGPRPEKPIEIYEFE                             SCPFC
Sbjct: 121 FAGFKLKESSKLGPRPEKPIEIYEFE-----------------------------SCPFC 180

Query: 181 RKVREIVAVLDIDVLYYPCPRNGPNFRPKAAQMGGKKMFPYMVDPNTGVAMYESNDIIKY 240
           RKVREIVAVLDIDVLYYPCPRNGPNFRPKAAQMGGKKMFPYMVDPNTGVAMYESNDIIKY
Sbjct: 181 RKVREIVAVLDIDVLYYPCPRNGPNFRPKAAQMGGKKMFPYMVDPNTGVAMYESNDIIKY 217

Query: 241 LVNKYG 247
           LVNKYG
Sbjct: 241 LVNKYG 217

[Close]

BLAST of Spo24141.1 vs. UniProtKB/TrEMBL
Match: A0A0J8BZ44_BETVU (Uncharacterized protein OS=Beta vulgaris subsp. vulgaris GN=BVRB_7g159440 PE=4 SV=1)

HSP 1 Score: 373.2 bits (957), Expect = 3.800e-100
Identity = 190/246 (77.24%), Postives = 199/246 (80.89%), Query Frame = 1

		  
Query: 1   MAGALTFASIPILRPLSCRKMPKNSFRIRASTEISEPTVESSSQGSSDARVSTSKPTFSA 60
           MAG L +A IPILRPL+CRKMP  SFRIRASTEISEPTV     G  DAR+STS P FSA
Sbjct: 1   MAGVLNYAQIPILRPLTCRKMPNKSFRIRASTEISEPTV-----GDLDARISTSSPNFSA 60

Query: 61  PPNFKAPEPKRFGIRPDRTLDILGASLSLIFRLGTGVFADGYSVSLVSKDEIPSDQYALE 120
           P NFK PEPKRFGIRPDRT DILGASLSL+FRLGTGVFADGYSVS+VSK+EIPSDQYALE
Sbjct: 61  PANFKPPEPKRFGIRPDRTFDILGASLSLVFRLGTGVFADGYSVSIVSKEEIPSDQYALE 120

Query: 121 FAGFKLKESSKLGPRPEKPIEIYEFESLLQLIGNLTNYFAPFASLYLASNVPEYISCPFC 180
           FAGFKLKESSKLGPRPEKPIEIYEFE                             SCPFC
Sbjct: 121 FAGFKLKESSKLGPRPEKPIEIYEFE-----------------------------SCPFC 180

Query: 181 RKVREIVAVLDIDVLYYPCPRNGPNFRPKAAQMGGKKMFPYMVDPNTGVAMYESNDIIKY 240
           RKVREIVAVLD+DVLYYPCPRNGPNFRPKA+QMGGKK FPYMVDPNTGVAMYES+DIIKY
Sbjct: 181 RKVREIVAVLDLDVLYYPCPRNGPNFRPKASQMGGKKQFPYMVDPNTGVAMYESDDIIKY 212

Query: 241 LVNKYG 247
           LVNKYG
Sbjct: 241 LVNKYG 212

[Close]

BLAST of Spo24141.1 vs. UniProtKB/TrEMBL
Match: V4UUS7_9ROSI (Uncharacterized protein OS=Citrus clementina GN=CICLE_v10012144mg PE=4 SV=1)

HSP 1 Score: 300.8 bits (769), Expect = 2.400e-78
Identity = 152/247 (61.54%), Postives = 176/247 (71.26%), Query Frame = 1

		  
Query: 1   MAGALTFASIPILRPLS-CRKMPKNSFRIRASTEISEPTVESSSQGSSDARVSTSKPTFS 60
           MAG L F+   + RPLS  R++P+ SF IRA++E S+     SS  ++  +       F+
Sbjct: 1   MAGVLNFSQPSLFRPLSGSRQIPRTSFSIRATSESSKTPQTPSSSSTTSTQEKPEPTPFA 60

Query: 61  APPNFKAPEPKRFGIRPDRTLDILGASLSLIFRLGTGVFADGYSVSLVSKDEIPSDQYAL 120
           APPNFK PEPKRF +RPD+ LDILGA+L+L FR GTGVF  GYS S VSKDEIP DQYA+
Sbjct: 61  APPNFKPPEPKRFAVRPDKALDILGAALALFFRFGTGVFVSGYSASFVSKDEIPPDQYAM 120

Query: 121 EFAGFKLKESSKLGPRPEKPIEIYEFESLLQLIGNLTNYFAPFASLYLASNVPEYISCPF 180
           E AGFK+KE+SKLGPRPEKPIEIYE+E                             SCPF
Sbjct: 121 EIAGFKVKETSKLGPRPEKPIEIYEYE-----------------------------SCPF 180

Query: 181 CRKVREIVAVLDIDVLYYPCPRNGPNFRPKAAQMGGKKMFPYMVDPNTGVAMYESNDIIK 240
           CRKVREIVAVLD+DVLYYPCPRNGPNFRPK  QMGGKK FPYMVDPNTGV+MYES++IIK
Sbjct: 181 CRKVREIVAVLDLDVLYYPCPRNGPNFRPKVLQMGGKKQFPYMVDPNTGVSMYESDNIIK 218

Query: 241 YLVNKYG 247
           YLV KYG
Sbjct: 241 YLVGKYG 218

[Close]

BLAST of Spo24141.1 vs. UniProtKB/TrEMBL
Match: A0A067FW90_CITSI (Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g019711mg PE=4 SV=1)

HSP 1 Score: 300.1 bits (767), Expect = 4.100e-78
Identity = 152/247 (61.54%), Postives = 175/247 (70.85%), Query Frame = 1

		  
Query: 1   MAGALTFASIPILRPLS-CRKMPKNSFRIRASTEISEPTVESSSQGSSDARVSTSKPTFS 60
           MAG L F+   + RPLS  R++P+ SF IRA++E S+     SS  ++  +       F+
Sbjct: 1   MAGVLNFSQPSLFRPLSGSRQIPRTSFSIRATSESSKTPQTPSSSSTTSTQEKPEPTPFA 60

Query: 61  APPNFKAPEPKRFGIRPDRTLDILGASLSLIFRLGTGVFADGYSVSLVSKDEIPSDQYAL 120
           APPNFK PEPKRF +RPD+ LDILGA+L+L FR GTGVF  GYS S VSKDEIP DQY L
Sbjct: 61  APPNFKPPEPKRFAVRPDKALDILGAALALFFRFGTGVFVSGYSASFVSKDEIPPDQYTL 120

Query: 121 EFAGFKLKESSKLGPRPEKPIEIYEFESLLQLIGNLTNYFAPFASLYLASNVPEYISCPF 180
           E AGFK+KE+SKLGPRPEKPIEIYE+E                             SCPF
Sbjct: 121 EIAGFKVKETSKLGPRPEKPIEIYEYE-----------------------------SCPF 180

Query: 181 CRKVREIVAVLDIDVLYYPCPRNGPNFRPKAAQMGGKKMFPYMVDPNTGVAMYESNDIIK 240
           CRKVREIVAVLD+DVLYYPCPRNGPNFRPK  QMGGKK FPYMVDPNTGV+MYES++IIK
Sbjct: 181 CRKVREIVAVLDLDVLYYPCPRNGPNFRPKVLQMGGKKQFPYMVDPNTGVSMYESDNIIK 218

Query: 241 YLVNKYG 247
           YLV KYG
Sbjct: 241 YLVGKYG 218

[Close]

BLAST of Spo24141.1 vs. UniProtKB/TrEMBL
Match: A0A067FSQ3_CITSI (Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g019711mg PE=4 SV=1)

HSP 1 Score: 300.1 bits (767), Expect = 4.100e-78
Identity = 152/247 (61.54%), Postives = 175/247 (70.85%), Query Frame = 1

		  
Query: 1   MAGALTFASIPILRPLS-CRKMPKNSFRIRASTEISEPTVESSSQGSSDARVSTSKPTFS 60
           MAG L F+   + RPLS  R++P+ SF IRA++E S+     SS  ++  +       F+
Sbjct: 1   MAGVLNFSQPSLFRPLSGSRQIPRTSFSIRATSESSKTPQTPSSSSTTSTQEKPEPTPFA 60

Query: 61  APPNFKAPEPKRFGIRPDRTLDILGASLSLIFRLGTGVFADGYSVSLVSKDEIPSDQYAL 120
           APPNFK PEPKRF +RPD+ LDILGA+L+L FR GTGVF  GYS S VSKDEIP DQY L
Sbjct: 61  APPNFKPPEPKRFAVRPDKALDILGAALALFFRFGTGVFVSGYSASFVSKDEIPPDQYTL 120

Query: 121 EFAGFKLKESSKLGPRPEKPIEIYEFESLLQLIGNLTNYFAPFASLYLASNVPEYISCPF 180
           E AGFK+KE+SKLGPRPEKPIEIYE+E                             SCPF
Sbjct: 121 EIAGFKVKETSKLGPRPEKPIEIYEYE-----------------------------SCPF 180

Query: 181 CRKVREIVAVLDIDVLYYPCPRNGPNFRPKAAQMGGKKMFPYMVDPNTGVAMYESNDIIK 240
           CRKVREIVAVLD+DVLYYPCPRNGPNFRPK  QMGGKK FPYMVDPNTGV+MYES++IIK
Sbjct: 181 CRKVREIVAVLDLDVLYYPCPRNGPNFRPKVLQMGGKKQFPYMVDPNTGVSMYESDNIIK 218

Query: 241 YLVNKYG 247
           YLV KYG
Sbjct: 241 YLVGKYG 218

[Close]

BLAST of Spo24141.1 vs. TAIR (Arabidopsis)
Match: AT5G03880.1 (Thioredoxin family protein)

HSP 1 Score: 244.6 bits (623), Expect = 1.000e-64
Identity = 126/239 (52.72%), Postives = 152/239 (63.60%), Query Frame = 1

		  
Query: 11  PILRPLSC---RKMPKNSFRIRASTEISEPTVESSSQGSSDARVSTSKPTFSAPPNFKAP 70
           PILR LS    R   +    ++AS+     +V  S++ S D         F+APP FK P
Sbjct: 14  PILRSLSSSSRRSSIRTLVMVKASSSEPSESVSVSTKTSDDTGAVV---VFTAPPGFKPP 73

Query: 71  EPKRFGIRPDRTLDILGASLSLIFRLGTGVFADGYSVSLVSKDEIPSDQYALEFAGFKLK 130
           EPKRF ++  +  D+LGA++ L FR GTGVF  GYS S VSK+EIP+DQYAL   G  +K
Sbjct: 74  EPKRFAVKSGKLFDVLGAAIGLFFRFGTGVFVSGYSASFVSKEEIPADQYALRLGGITVK 133

Query: 131 ESSKLGPRPEKPIEIYEFESLLQLIGNLTNYFAPFASLYLASNVPEYISCPFCRKVREIV 190
           E++K+GPRPEKPIEIYEFE                              CPFCRKVRE+V
Sbjct: 134 ETAKVGPRPEKPIEIYEFE-----------------------------GCPFCRKVREMV 193

Query: 191 AVLDIDVLYYPCPRNGPNFRPKAAQMGGKKMFPYMVDPNTGVAMYESNDIIKYLVNKYG 247
           AVLD+D+LYYPCPR  PNFRPK  QMGGK+ FPYMVDPNTGV+MYES+ IIKYL  KYG
Sbjct: 194 AVLDLDILYYPCPRGSPNFRPKVKQMGGKQQFPYMVDPNTGVSMYESDGIIKYLSEKYG 220

[Close]

BLAST of Spo24141.1 vs. TAIR (Arabidopsis)
Match: AT4G10000.1 (Thioredoxin family protein)

HSP 1 Score: 93.6 bits (231), Expect = 3.000e-19
Identity = 39/75 (52.00%), Postives = 52/75 (69.33%), Query Frame = 1

		  
Query: 173 EYISCPFCRKVREIVAVLDIDVLYYPCPRNGPNFRPKAAQMGGKKMFPYMVDPNTGVAMY 232
           E+ +CPFCR+VRE +  LD+ V  YPCP+     R    + GGK+MFP++VDPNT   MY
Sbjct: 135 EFEACPFCRRVREAMTELDLSVEVYPCPKGSIRHRELVRRSGGKEMFPFLVDPNTETLMY 194

Query: 233 ESNDIIKYLVNKYGS 248
           ES DI+KYL  +YG+
Sbjct: 195 ESGDIVKYLFKQYGN 209

The following BLAST results are available for this feature:

BLAST of Spo24141.1 vs. NCBI nr
BLAST of Spo24141.1 vs. UniProtKB/TrEMBL
BLAST of Spo24141.1 vs. ExPASy Swiss-Prot
BLAST of Spo24141.1 vs. TAIR (Arabidopsis)

BLAST of Spo24141.1 vs. NCBI nr
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. NCBI nr)
Total hits: 5

Position :

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x 1


Match Name	E-value	Identity	Description
gi\|902198348\|gb\|KNA13643.1\|	1.8e-114	88.2	hypothetical protein SOVF_1148...	[more]
gi\|731345058\|ref\|XP_010683726.1\|	5.5e-100	77.2	PREDICTED: uncharacterized pro...	[more]
gi\|567875199\|ref\|XP_006430189.1\|	3.5e-78	61.5	hypothetical protein CICLE_v10...	[more]
gi\|641851559\|gb\|KDO70429.1\|	5.9e-78	61.5	hypothetical protein CISIN_1g0...	[more]
gi\|568856384\|ref\|XP_006481764.1\|	5.9e-78	61.5	PREDICTED: uncharacterized pro...	[more]

BLAST of Spo24141.1 vs. UniProtKB/TrEMBL
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. UniprotKB/TrEMBL)
Total hits: 5

Position :

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x 1


Match Name	E-value	Identity	Description
A0A0K9R2B5_SPIOL	1.2e-114	88.2	Uncharacterized protein OS=Spi...	[more]
A0A0J8BZ44_BETVU	3.8e-100	77.2	Uncharacterized protein OS=Bet...	[more]
V4UUS7_9ROSI	2.4e-78	61.5	Uncharacterized protein OS=Cit...	[more]
A0A067FW90_CITSI	4.1e-78	61.5	Uncharacterized protein OS=Cit...	[more]
A0A067FSQ3_CITSI	4.1e-78	61.5	Uncharacterized protein OS=Cit...	[more]

BLAST of Spo24141.1 vs. ExPASy Swiss-Prot
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. ExPASy SwissProt)
Total hits: 0

Position :

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x 1


Match Name	E-value	Identity	Description

BLAST of Spo24141.1 vs. TAIR (Arabidopsis)
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. TAIR)
Total hits: 2

Position :

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x 1


Match Name	E-value	Identity	Description
AT5G03880.1	1.0e-64	52.7	Thioredoxin family protein	[more]
AT4G10000.1	3.0e-19	52.0	Thioredoxin family protein	[more]

InterPro

Analysis Name: InterPro Annotations of S. oleracea
Date Performed: 2018-06-29

Position :

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x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR004045	Glutathione S-transferase, N-terminal	PFAM	PF13417	GST_N_3	coord: 176..246 score: 5.4
IPR012336	Thioredoxin-like fold	GENE3D	3.40.30.10		coord: 177..247 score: 2.8
IPR012336	Thioredoxin-like fold	unknown	SSF52833	Thioredoxin-like	coord: 175..249 score: 6.47
None	No IPR available	PANTHER	PTHR11260	GLUTATHIONE S-TRANSFERASE, GST, SUPERFAMILY, GST DOMAIN CONTAINING	coord: 175..246 score: 2.3E-26coord: 114..145 score: 2.3
None	No IPR available	PANTHER	PTHR11260:SF166	GLUTATHIONE S-TRANSFERASE D2-RELATED	coord: 114..145 score: 2.3E-26coord: 175..246 score: 2.3

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0009987	cellular process
biological_process	GO:0010364	regulation of ethylene biosynthetic process
biological_process	GO:0009855	determination of bilateral symmetry
biological_process	GO:0009873	ethylene-activated signaling pathway
biological_process	GO:0010014	meristem initiation
biological_process	GO:0010073	meristem maintenance
biological_process	GO:0009086	methionine biosynthetic process
biological_process	GO:0035196	production of miRNAs involved in gene silencing by miRNA
biological_process	GO:0010267	production of ta-siRNAs involved in RNA interference
biological_process	GO:0016567	protein ubiquitination
biological_process	GO:0000394	RNA splicing, via endonucleolytic cleavage and ligation
biological_process	GO:0006298	mismatch repair
biological_process	GO:0009069	serine family amino acid metabolic process
biological_process	GO:0010050	vegetative phase change
biological_process	GO:0009616	virus induced gene silencing
biological_process	GO:1901137	carbohydrate derivative biosynthetic process
biological_process	GO:0019252	starch biosynthetic process
biological_process	GO:0005985	sucrose metabolic process
biological_process	GO:0070988	demethylation
biological_process	GO:0055114	oxidation-reduction process
biological_process	GO:0045036	protein targeting to chloroplast
biological_process	GO:0007267	cell-cell signaling
biological_process	GO:0042545	cell wall modification
biological_process	GO:0007033	vacuole organization
biological_process	GO:0006002	fructose 6-phosphate metabolic process
biological_process	GO:1902171	regulation of tocopherol cyclase activity
biological_process	GO:0036092	phosphatidylinositol-3-phosphate biosynthetic process
biological_process	GO:0046835	carbohydrate phosphorylation
biological_process	GO:0016311	dephosphorylation
biological_process	GO:0050821	protein stabilization
biological_process	GO:0006003	fructose 2,6-bisphosphate metabolic process
biological_process	GO:0042732	D-xylose metabolic process
biological_process	GO:0006000	fructose metabolic process
biological_process	GO:0006013	mannose metabolic process
biological_process	GO:0043609	regulation of carbon utilization
biological_process	GO:0006468	protein phosphorylation
cellular_component	GO:0005829	cytosol
cellular_component	GO:0009507	chloroplast
cellular_component	GO:0005886	plasma membrane
cellular_component	GO:0016021	integral component of membrane
cellular_component	GO:0009706	chloroplast inner membrane
cellular_component	GO:0010287	plastoglobule
cellular_component	GO:0009501	amyloplast
molecular_function	GO:0051537	2 iron, 2 sulfur cluster binding
molecular_function	GO:0010277	chlorophyllide a oxygenase [overall] activity
molecular_function	GO:0005515	protein binding
molecular_function	GO:0046872	metal ion binding
molecular_function	GO:0004331	fructose-2,6-bisphosphate 2-phosphatase activity
molecular_function	GO:0009011	starch synthase activity
molecular_function	GO:0005524	ATP binding
molecular_function	GO:0004672	protein kinase activity
molecular_function	GO:2001070	starch binding
molecular_function	GO:0042578	phosphoric ester hydrolase activity
molecular_function	GO:0030983	mismatched DNA binding
molecular_function	GO:0003873	6-phosphofructo-2-kinase activity
molecular_function	GO:0018489	vanillate monooxygenase activity

RNA-Seq Expression

Co-expression


Gene	r value	Expression
Spo02263	0.73	Barchart \| Table
Spo12258	0.70	Barchart \| Table
Spo02446	0.68	Barchart \| Table
Spo19174	0.68	Barchart \| Table
Spo13334	0.66	Barchart \| Table
Spo15874	0.66	Barchart \| Table
Spo16919	0.66	Barchart \| Table