Spo19002 (gene)

Overview
NameSpo19002
Typegene
OrganismSpinacia oleracea (Spinach)
DescriptionPentatricopeptide repeat-containing protein, putative
LocationSuper_scaffold_114 : 245042 .. 253261 (-)
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
ACCAAAATCCTCGTACGATCGACATTCGACAGGGGTTCATTTTGTGACTTCTGGCTCAACCAAAATATAACAAAAACAAAGAAGTTGAAGAACATTAACCAAAGCGGATTTGTTCGTAATTTCTGCAATAATTCCGATACACCTCTCCGATGAACTGGGTTGAACAATCTGACAAATATGAGAGTAATCGCCCTTGCTTTAGGGCGTTCGGTCACTGCGGCATTTCATCGAACACTTGGTGTGCCTCTGAAAATGAGCAACAGAGTAGCTGCATTTGCATATTGCACTCAAACAACCAGTGAGAAATCTGAATTGGGTTTGAAAAATTCAAGCTCTAATGGCGAAGAAGCACTAAAGATGTTATCTTTAAGAATAGAGAGGCTACCAAGAGGAGAATCTATTGGGTATGTGTTTCAGAGGTGGATGGGTGAAGGTTTTCCTGTTCATAGGGGTGATATTTTCCATTCCATCAACCGTTTGAGGAAGCTCAAATTGGATAGACGTGCTCTAGAGGTGTCTTTTTTCTCTAACTCTTGCTTATTCATCTCATGTTTAATTACTCCTTATTATTTTATAAATTTGCTTGAAATGAGGTTTCCTGTTTTAATGATCGGACCCTAGGAGTAGACAAGAATTGATAGAATGATCACCTGGCGTTCGGCACTCGGTGCAGGGTATGAACTGGCATACCATCTGCATATGTACTCTCAGTAGTCCACCGTCTAGGAAGGGTTAAAACTGAGAGCTTATCATGTGCACAGGTATTACATTACACCAAAAAGCAACTTGCTATCATTAACACTACATTTACTGGCTACTTTAAGAGTAATAACCTTAAAAACATTTGCAGAATCTAAACATCTGCCACTGAACACTTTGTTATTTCTCTGCCACCAGATACTATATATACTGTCTGCAAAGCACATCCCAAGTAGTTTCCCCCTACTTTGCTTCCTTCTGCAAGCCTTGGCTACTTTATCAACTTCCTCTGAATTACTCTAAACTGCTCTCTTAAACAGCAGTAAATGCAAAATCTTGCTCCATTTGCTGGAAGAATAGCTATATTCAAAGAAAAGATGCTCTGTAGTCTCATTCTGCAACCCACACAAACCACATTTAGGGTCCACCACAATTCCCCATTTTACAAGTCTGTCTTTAGTTACAAGTCTACGCAATAGGGAAAGCCAAGTGGTAAAGAGACATTTTGGCTAGCTCTATTGTTAAATATGACATTCAAAGTAGGACCTCTCATCTTCAGAAACAGCTTTTTAATTGAAAAAGTCGCACCATCAGTGAATTGTTGCACATTACCATGATCCTGCAAAATTTCCCTACTGTCCAAGATCTTCAGCACCCGTGAAGTCCCATTAGGAATGGGCATACTCAATATACCTCTATCTTTAACATGACGCGTGCAACCATTTAATCCACATTTTATCTTGTTTCTGAGAAATAGCCCAAACATTTTGCAAATTGCAGCTCTGTTCCAAGTTGGCATATCCATGAAGTTCCACCCACCAGCAGCCTTAGGTAGATGCAAATGCTCCCAGGCAACCGAGGTTTTCCTAGATGGATTGTGAAAACCTGTCCACAGAAAGGTCCTACTATGTCTTTGAACCTCCTTCATACTTTTTTTGTTATGAGTAAAAATCTGGGACCCATGAGATTGAATACCAAACAAAACCACTCTAATATGCTGGACCCTTCCTGCATATGTAAGTTGTTGCAGTCCACGTCTTTTTTCTTGCCACTATTTTCTCAATCAGAGGTTTACACTGATTGTATGTTAGCTTCTTTAAAGCCAAAGGCACACCTAAATACCTAAAAGGTAAATCTCCTTGATTCATATTCAGGTTAGCTTTAATGTTAGCACTCTCTTCAATAGATAACCCACGTAGATAAACCTGCTTTTGTCCACATTTGCTTCTAACCCAGAAGCTTTAGAAAATTTCATAAACTCGGAAAATAAAAGATCAGCATACATGCTATCGCCTCTAGCAAACATCATACGAGTCAATTACACCTTTTCACATCTTGGGTGAAAAAAAATTAAAGTTAGGATTATCACCTAAAGAACTCAATTACCTTTAGAGGTATCCCCTTTTGATGGCGAATAAGAAAGGGGACATGGGATCTCCCTGTCCTAGACCCTTCCTAGCAGGGAAAGGCTTGCCGTTAATAAGAATGGAATAGGAAACTGATTGCACACATTCCATAACCATCCCAAAAACTTATGAGGAAAGCCTAACACAGCTAACACACTCCTCAAATACGGCTATTCCAAGGAATCATAAGCTTTCTTTAAATCTATCTTTAGCATGCATCTAGGGGACACGTGTTTCCTGTTATACCCCTTTTTGAGCTCTGTTGCAAGCGAACTATTACTGCTATGGGTCTTTTATGGATAAAACCAGATAGATGTACATCTATTACCTTAGTTATGACCTTCTGCATTCTACTAGTCCATAACCTTAGCAATAATATTATACTCAAGGGAGCAACATGCAATAGGCCTGTAATCCCTGATAGTACAAGGAGAGTAAATTTGGGGATCAATGTTACTGAAGTGCTATTTACCCGAGGCAAGAGTTTAGAAGATTGAAAGAATTCCTTCACTTCTATGTGTACACCTGCTTTCACCACATGCCATGCTTTCTTCAAAAAAACAGCGTTAAAACCATCAAGGCCCAGAACCTTTAGTTTATCAATGCCATTTAGACATCATAAATTTCTGTTGAAGTAACTGGCAGAACCAAGAAATCTGCAGATTAACTTAGTTGCTCACCCTTCTTAAGCAACTGAACATCAATACCCTGCAAACAATTAGTTGAAGAGCCTAAAAGCTCTTTATAAAATCCAACCGCTTCTGCTTGGATTCCTGGAGCATCAGTAATCCTATTGCCATGTTTTTTGTGCAAGACGTCTATGCTACTATGAGTGAACCTTTCTCATAAACGAGAAATATATATGATTGTTTCCATCTCCCAATTGCAGCAACTGTATCCTAGATTTTTCTTTAGAGCACTCTCCTCTATTCGAAGCCACTTCTTTACTTGAAACTGACAATCATACTCCATTCATGTAACCTGATGCACCAGGCCTCTCACACAACTGACTTTGAACCAAAATCAAGCTCACTTCTCTTCTTTTCAATCCTATCGGAAATACCTGCAAACTCCTTTTTATTCAAGTTCTTAAGAGTAGCTTTACAATTCTGTAACTTCTGCCACAACTGATACATTGCAGTCCCTTGGTTATTAGCTGCGCGCTGCACAGCTACTATATCAACAAAGTTCTCATGATCAGCAAAATGACTTGAAAATCTGAAAGGCCTTCCTCCGCTATTATGCTGAAGGTTGCAGTTGATCAGCAATGGTGTATGGTCCAACAAGGAGAAATTCATGTATTCTACTGGTACCCAGAAAAATGAGAGTGACATAAACTGTTACCCACTGCCCTATCAGTTTTACCAAGAATTCTACCTTCTCCATTACCCTTGTTAATCCATGAGTATTGATGGCCAATATTATGAAGCTCAGAAAGATCAAAAGTATCCAGTAGCTCTGTAAAATCCTTAGTTTCATCCTCAACTACAGGATTCCCATTAACTCTATCCTCTAAGTTCAAAACAGCATTATAATCACCAATAGCCATCCAAGGGGTAAATGTTGTATTATTATATCTCAACAACTGGTTCCACAAAGTTTTCCTATTTCAATCGTATGCAAACGATAAACTGCTGACAGAGTTCTTATAAAATTACTAGACTTATGCATTAGAACAATGAATGACTTGTTCAGAAATCTCAATCTCCTTTAAAGTAATCAACTGATGATTCCATCCAGACCAATTTGTTTTCTCGCTCCTTGCAAACTCTACCCTTAGGAGAGTAGTCATAATTACATTCCCAGTGCCACATATTTCCAAACTTCTTCATTATCTTTCCTTTATTCTTGAGTCTAACTCTAGTTTCTAAAAGAAGGATTATGTCTATTTTATTACTAGCAAGAAATTACTGTATTTCAGCTACTTTAATAGGGTCATTAAGACCTCTAACATTACAAGAACAGATAATCATCCAAGTGATATGATTTATACCTGCCAATCCCTCCTCATGTGCCTCCTCTTTATTCTCCACACTAGATTCAGGTGCTTTGTATTTGGCTGTAGCTGGGAATGCCCGAATCCAGATTTTCTTGTTCCTATCCTCCATCCATTCTCATCCACTTTAGTAGAGCTACTAGTAGTAGCAGTAGTAGGACTAACTGTTCTGTTCTGCTCACTTGCCCATTTACAGGAGTAGTGATTTTGTGAGTATCTCTCTTTGTATCGGGAACAATCTTCTTAGGAGTCCACCTTTTGGTGACCTTAGGAGAAGGTTTAAACCTTGTTCTAGGTTCCGGAGTCCACTTGACCTTGCAGCCATGCCCAACTGCTTGGTATATATCACCTTTTGTTCAATTATTTCCCCATTTGGAGCCTCTATAAGCACCTTGTCATGAAGCCATTCAGTTATATCCATTTCTATCAGCATCCTGGAAAAAGAAACCCTCATTTGCTTTGATGTGCATTCATCTGCAAATAAGGGAATACCCAACAGGATTCCACTTCTGCTCAATGAGTCTGCACTCCAACACTTCAATGGAGATAGAATATGAAAAGGGAAAATTCTTGATTGCATTTGATTAATGAAAAGGAGCAGCCTTATATAAGGCAAAATACAAAACAGTTATGCTAAGATAATGGAAAGGAAAGTGGACAAAGGAATGTCCCACGTACACAACTCACTACTACTGATAAATAGGAAACCACTAACTAATAATGCTTAATTAAAGGAAAAAGTCAAGAACAAACTTTGAATTAACTACTTAATTATCCAACAAATGACAGATTTGACAACCTTATCCACAGTGGAATTACCCTCAAAACCTAATGAAAATCTAGCTACATTCTTACCATCTTTAATTACAGGAGGAACAAAGATTAAGGGATTACCTTTTAGAGCTCGCCTGGAATTGGGTAGAAATTAAGGGGGTACTATGTCAAGGGATATTGATTCCAATGTAATAATTCACGGGGGATCTTTTCTTTTCTCACGGGTTTGGTTTCATTACTGGAGTAACTGAAATCCTCCTCATCCTTCCACCATTTCCCAGCAAACATACCAGTGTGACTAGATGGAAAGAGGAAGGAGAGAAAGAATTTGGGGTAATACATTACTCTGGGGGGTGGGTAGGTAACAAATACCTCCATTTTTAGGGGAAAAGAATACCCCTGTAACTTCCTACCTTCAATCCAGGCTGTTAAAATAACCAAAATTCTTACTCCCTCAAATTTTCCACTCCCATTTCTCTTGATCCAGGCGTGCCCTCACAGTGAGTAGTTTGTTCCCTGTAAAGAGGCCCATTGATTATGGGGAATCATAGGACCTCCTTTTCCAACATCAACCTACGCACCACATTTGAATTAGGACTTTCACCCTGTTCCATAGTTTCATTGGTCTCCAAATTAGCAGTGTTGTCTACCTGACCTTATCAAATGCAACAATAATGTTTTGCATATGTTGCTGTATTACCATCAAAGCTTGGCTTCACTTTCTTGTTGAAGGGACACCATTATTTCCGCCATTATTGCCTCTGATTTGAGCTTCAATTGCAGCACTCAGAGCTAACTTCATTGCACTCCCTGGCCCCACATCCTGGAATGATTTAATTGCAGTATGAATTTCTTGGCTTACTGGTCCAGCGCTGGGGTGTGGAGAATTAACAACCCTTGGAATGGATACTGTTGTTTCATTTCCCGCCGAACTGGGTTTCTGAATGATGAGATGCTTCTCCTGTTTGTAATGTAGAGAATACGTAGAGAATACGACCTGAGGTTTCTTCTTCTTCCTCATATGAGACTTCGGTGCACGATAGCAAGGTTCCCTTATCTTGTGCGCTGCATTACCATGGGAGGGTTTTTGAGTAAACGACGGTGCTTTGCTTTTGTTTAACCTCTATGTTGCATAACACAATTATTTTATATCTATCAAGCTCAAAAGTTTTGAATGGTCATGAAAGAGCTGAATCAGGATATATTCTCTGATGGAAAACTGTATGCTGCTGCTAAGAAAACGGCATTGCAATCTCCAAAGGTGTTGGAGAGGGGATCTTGGTATAACTGAAAAGCTTAATTTGAGCCTTACTGGATTTCTGATATAGGAATCAGGGTTCATTGGCTAAAAGATGGGACGATAACTCTAATTTCTTTTATCATTATCTCAAAATCATGACAGGGTTTATGTTATTGCTGTGACAACAAGGGCATCTGACTGACCAGTCCTATGATATGAGGAATGCTAAAAGGAAAATTCATATTTTCCAGGGTATTAGGAATGTGATCATTCATTCTTAGGTTTTATGTTATCCATGATATCAAGAATGGATATAGAAGATAATATTGGCTGTTTAATTCTGTTTTGAAATGACTTGTTTATGGAAGAAATGTGTTGTTCAACTTGCCCAACAGAAGTCTATCCCTAGGATCATGATAGTGCATGCATTTTCACTGAGTTGCTGATGTCTGTTTCCTTGATTATTACTGCTAATTAGTTGAATTAGAAACAAATTGTATAAGTAACTGCTTGTCGACTATCGTTGATGTGAGTTTTCTTATGTTTGACAGGTAATGGAGTGGGTGATTAGAGAGAAGCCATATAGGCCAAAGGAGTTAGATTATTCATATCTGCTGGAATTTACCATTAAACTTCACGGTATATCACATGGTGAGAGACTGTTCACTAATGTTCCTATCGAATTCCAGAACGATTTGTTGTACAACAATCTTGTAATTGCATGCTTGGATAAAGGAGTGGTCAGGCTTTCATTAGAGTACATGAAGAAAATGAGAGAATTGGGACATCCTATCTCTCATTTGGTCTTCAACCGTCTCATAATTCTTCATTCCTCCCCTAGGCGTAGGAATATGATCCCCAAAATTCTCGCCCAAATGAGGGCCGATAAGGTTGCTCGTCATGTCTCAACTTTCAACATTCTTTTGAAGATTGAAGCTAATGACCATAACATAGAAGGACTGATGAAAGTTTTTGGGGATATGAAGCGGGCAAACATCGAACCAAATGAAGTTACATACTGCATTCTAGCGACTGCACATGCAGTTGCAAAGCTGTATTGTGGATGTGAGACATATGTGGAGGCTATTGAGAAGTCGAAAACAGGCAATAATTGGTCAACGTTTGATGTGCTCATCATTTTGTATGGATACTTAGGAAAGGCAAAGGAGGTAGATCGAATTTGGAGCATTGTGCAAGGTTTCCCTCATGTTAGGTCAAAGAGCTATTTGCTGGCAATTGAGGCATTTGGTAGAATGGGACAGCTGAATCGCGCTGAGCAACTTTGGGATGAATGTAAGCCCAGAGAAGGTATGAAATCAACTGAACATTATAACTCCATGGTATCTGTTTATAGCAGGAATGGATTTATTGATAAGGTTTCAGGTCTTTTTAAAGAAATGAATATGAATGGAAGCAAACCTAACGCGATAACCTATAGACATCTTGCTTTGGGTTGCCTAAAAGCTGGATTGATCAAGGAAGCATTGAGGACCATAGAAATGGGGTTAAAACAAATCACAAGCAGCAAAGTGAAAAAATCAACCCCATGGTTGGAGACTACCTTGTCCATTCTTGAGATGTTTGCAGACAACGGAGATGTAGAGATTGCAGAGAATCTGTTCGAAGAACTTAAGCAAGCAAACTATACTAGGTATGCATTTGTGTACAATAGTTTAATAAAAGCTTATGTTCGGGCTAAGTTCTATAATCCAAACCTTTTAAGGAGGATGATTCTCGGAGGGGCTAGGCCAGATGCTGAGACCTACAGCTTGATTAAGCTTGTTGAACAGTTTAGAACTTGAGTGGAAAAATTCTGCATTTCACCCCCAGCCCCTTATTTGAATCAAGCTATAAAATCAAGATTGTAGTCACATGTTATTGAACATCTTTAGGTGAATGTTTAGAATTGTGTGCATAATTCACTAATTTTAAGTTGTAAGTTGAATTACTTGTGGGTTTTGTTTCTTTTTATCCTAATTCATGCTTCATAAATTTATTATTCTTTGCATTCGAATGGTGGGTGTGGTATAAATGTCAATGTATACCCTGTTTGAAAGACGATCATACAGGTGTACCCAATTGTAATTTTGAACTTGGTAACTTAG

mRNA sequence

ACCAAAATCCTCGTACGATCGACATTCGACAGGGGTTCATTTTGTGACTTCTGGCTCAACCAAAATATAACAAAAACAAAGAAGTTGAAGAACATTAACCAAAGCGGATTTGTTCGTAATTTCTGCAATAATTCCGATACACCTCTCCGATGAACTGGGTTGAACAATCTGACAAATATGAGAGTAATCGCCCTTGCTTTAGGGCGTTCGGTCACTGCGGCATTTCATCGAACACTTGGTGTGCCTCTGAAAATGAGCAACAGAGTAGCTGCATTTGCATATTGCACTCAAACAACCAGTGAGAAATCTGAATTGGGTTTGAAAAATTCAAGCTCTAATGGCGAAGAAGCACTAAAGATGTTATCTTTAAGAATAGAGAGGCTACCAAGAGGAGAATCTATTGGGTATGTGTTTCAGAGGTGGATGGGTGAAGGTTTTCCTGTTCATAGGGGTGATATTTTCCATTCCATCAACCGTTTGAGGAAGCTCAAATTGGATAGACGTGCTCTAGAGGTAATGGAGTGGGTGATTAGAGAGAAGCCATATAGGCCAAAGGAGTTAGATTATTCATATCTGCTGGAATTTACCATTAAACTTCACGGTATATCACATGGTGAGAGACTGTTCACTAATGTTCCTATCGAATTCCAGAACGATTTGTTGTACAACAATCTTGTAATTGCATGCTTGGATAAAGGAGTGGTCAGGCTTTCATTAGAGTACATGAAGAAAATGAGAGAATTGGGACATCCTATCTCTCATTTGGTCTTCAACCGTCTCATAATTCTTCATTCCTCCCCTAGGCGTAGGAATATGATCCCCAAAATTCTCGCCCAAATGAGGGCCGATAAGGTTGCTCGTCATGTCTCAACTTTCAACATTCTTTTGAAGATTGAAGCTAATGACCATAACATAGAAGGACTGATGAAAGTTTTTGGGGATATGAAGCGGGCAAACATCGAACCAAATGAAGTTACATACTGCATTCTAGCGACTGCACATGCAGTTGCAAAGCTGTATTGTGGATGTGAGACATATGTGGAGGCTATTGAGAAGTCGAAAACAGGCAATAATTGGTCAACGTTTGATGTGCTCATCATTTTGTATGGATACTTAGGAAAGGCAAAGGAGGTAGATCGAATTTGGAGCATTGTGCAAGGTTTCCCTCATGTTAGGTCAAAGAGCTATTTGCTGGCAATTGAGGCATTTGGTAGAATGGGACAGCTGAATCGCGCTGAGCAACTTTGGGATGAATGTAAGCCCAGAGAAGGTATGAAATCAACTGAACATTATAACTCCATGGTATCTGTTTATAGCAGGAATGGATTTATTGATAAGGTTTCAGGTCTTTTTAAAGAAATGAATATGAATGGAAGCAAACCTAACGCGATAACCTATAGACATCTTGCTTTGGGTTGCCTAAAAGCTGGATTGATCAAGGAAGCATTGAGGACCATAGAAATGGGGTTAAAACAAATCACAAGCAGCAAAGTGAAAAAATCAACCCCATGGTTGGAGACTACCTTGTCCATTCTTGAGATGTTTGCAGACAACGGAGATGTAGAGATTGCAGAGAATCTGTTCGAAGAACTTAAGCAAGCAAACTATACTAGGTATGCATTTGTGTACAATAGTTTAATAAAAGCTTATGTTCGGGCTAAGTTCTATAATCCAAACCTTTTAAGGAGGATGATTCTCGGAGGGGCTAGGCCAGATGCTGAGACCTACAGCTTGATTAAGCTTGTTGAACAGTTTAGAACTTGAGTGGAAAAATTCTGCATTTCACCCCCAGCCCCTTATTTGAATCAAGCTATAAAATCAAGATTGTAGTCACATGTTATTGAACATCTTTAGGTGAATGTTTAGAATTGTGTGCATAATTCACTAATTTTAAGTTGTAAGTTGAATTACTTGTGGGTTTTGTTTCTTTTTATCCTAATTCATGCTTCATAAATTTATTATTCTTTGCATTCGAATGGTGGGTGTGGTATAAATGTCAATGTATACCCTGTTTGAAAGACGATCATACAGGTGTACCCAATTGTAATTTTGAACTTGGTAACTTAG

Coding sequence (CDS)

ATGAGAGTAATCGCCCTTGCTTTAGGGCGTTCGGTCACTGCGGCATTTCATCGAACACTTGGTGTGCCTCTGAAAATGAGCAACAGAGTAGCTGCATTTGCATATTGCACTCAAACAACCAGTGAGAAATCTGAATTGGGTTTGAAAAATTCAAGCTCTAATGGCGAAGAAGCACTAAAGATGTTATCTTTAAGAATAGAGAGGCTACCAAGAGGAGAATCTATTGGGTATGTGTTTCAGAGGTGGATGGGTGAAGGTTTTCCTGTTCATAGGGGTGATATTTTCCATTCCATCAACCGTTTGAGGAAGCTCAAATTGGATAGACGTGCTCTAGAGGTAATGGAGTGGGTGATTAGAGAGAAGCCATATAGGCCAAAGGAGTTAGATTATTCATATCTGCTGGAATTTACCATTAAACTTCACGGTATATCACATGGTGAGAGACTGTTCACTAATGTTCCTATCGAATTCCAGAACGATTTGTTGTACAACAATCTTGTAATTGCATGCTTGGATAAAGGAGTGGTCAGGCTTTCATTAGAGTACATGAAGAAAATGAGAGAATTGGGACATCCTATCTCTCATTTGGTCTTCAACCGTCTCATAATTCTTCATTCCTCCCCTAGGCGTAGGAATATGATCCCCAAAATTCTCGCCCAAATGAGGGCCGATAAGGTTGCTCGTCATGTCTCAACTTTCAACATTCTTTTGAAGATTGAAGCTAATGACCATAACATAGAAGGACTGATGAAAGTTTTTGGGGATATGAAGCGGGCAAACATCGAACCAAATGAAGTTACATACTGCATTCTAGCGACTGCACATGCAGTTGCAAAGCTGTATTGTGGATGTGAGACATATGTGGAGGCTATTGAGAAGTCGAAAACAGGCAATAATTGGTCAACGTTTGATGTGCTCATCATTTTGTATGGATACTTAGGAAAGGCAAAGGAGGTAGATCGAATTTGGAGCATTGTGCAAGGTTTCCCTCATGTTAGGTCAAAGAGCTATTTGCTGGCAATTGAGGCATTTGGTAGAATGGGACAGCTGAATCGCGCTGAGCAACTTTGGGATGAATGTAAGCCCAGAGAAGGTATGAAATCAACTGAACATTATAACTCCATGGTATCTGTTTATAGCAGGAATGGATTTATTGATAAGGTTTCAGGTCTTTTTAAAGAAATGAATATGAATGGAAGCAAACCTAACGCGATAACCTATAGACATCTTGCTTTGGGTTGCCTAAAAGCTGGATTGATCAAGGAAGCATTGAGGACCATAGAAATGGGGTTAAAACAAATCACAAGCAGCAAAGTGAAAAAATCAACCCCATGGTTGGAGACTACCTTGTCCATTCTTGAGATGTTTGCAGACAACGGAGATGTAGAGATTGCAGAGAATCTGTTCGAAGAACTTAAGCAAGCAAACTATACTAGGTATGCATTTGTGTACAATAGTTTAATAAAAGCTTATGTTCGGGCTAAGTTCTATAATCCAAACCTTTTAAGGAGGATGATTCTCGGAGGGGCTAGGCCAGATGCTGAGACCTACAGCTTGATTAAGCTTGTTGAACAGTTTAGAACTTGA

Protein sequence

MRVIALALGRSVTAAFHRTLGVPLKMSNRVAAFAYCTQTTSEKSELGLKNSSSNGEEALKMLSLRIERLPRGESIGYVFQRWMGEGFPVHRGDIFHSINRLRKLKLDRRALEVMEWVIREKPYRPKELDYSYLLEFTIKLHGISHGERLFTNVPIEFQNDLLYNNLVIACLDKGVVRLSLEYMKKMRELGHPISHLVFNRLIILHSSPRRRNMIPKILAQMRADKVARHVSTFNILLKIEANDHNIEGLMKVFGDMKRANIEPNEVTYCILATAHAVAKLYCGCETYVEAIEKSKTGNNWSTFDVLIILYGYLGKAKEVDRIWSIVQGFPHVRSKSYLLAIEAFGRMGQLNRAEQLWDECKPREGMKSTEHYNSMVSVYSRNGFIDKVSGLFKEMNMNGSKPNAITYRHLALGCLKAGLIKEALRTIEMGLKQITSSKVKKSTPWLETTLSILEMFADNGDVEIAENLFEELKQANYTRYAFVYNSLIKAYVRAKFYNPNLLRRMILGGARPDAETYSLIKLVEQFRT
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Spo19002.1Spo19002.1mRNA


Homology
[Close]
BLAST of Spo19002.1 vs. NCBI nr
Match: gi|902164364|gb|KNA06965.1| (hypothetical protein SOVF_176270 [Spinacia oleracea])

HSP 1 Score: 1052.0 bits (2719), Expect = 3.500e-304
Identity = 528/528 (100.00%), Postives = 528/528 (100.00%), Query Frame = 1 

		  

Query: 1   MRVIALALGRSVTAAFHRTLGVPLKMSNRVAAFAYCTQTTSEKSELGLKNSSSNGEEALK 60
           MRVIALALGRSVTAAFHRTLGVPLKMSNRVAAFAYCTQTTSEKSELGLKNSSSNGEEALK
Sbjct: 1   MRVIALALGRSVTAAFHRTLGVPLKMSNRVAAFAYCTQTTSEKSELGLKNSSSNGEEALK 60

Query: 61  MLSLRIERLPRGESIGYVFQRWMGEGFPVHRGDIFHSINRLRKLKLDRRALEVMEWVIRE 120
           MLSLRIERLPRGESIGYVFQRWMGEGFPVHRGDIFHSINRLRKLKLDRRALEVMEWVIRE
Sbjct: 61  MLSLRIERLPRGESIGYVFQRWMGEGFPVHRGDIFHSINRLRKLKLDRRALEVMEWVIRE 120

Query: 121 KPYRPKELDYSYLLEFTIKLHGISHGERLFTNVPIEFQNDLLYNNLVIACLDKGVVRLSL 180
           KPYRPKELDYSYLLEFTIKLHGISHGERLFTNVPIEFQNDLLYNNLVIACLDKGVVRLSL
Sbjct: 121 KPYRPKELDYSYLLEFTIKLHGISHGERLFTNVPIEFQNDLLYNNLVIACLDKGVVRLSL 180

Query: 181 EYMKKMRELGHPISHLVFNRLIILHSSPRRRNMIPKILAQMRADKVARHVSTFNILLKIE 240
           EYMKKMRELGHPISHLVFNRLIILHSSPRRRNMIPKILAQMRADKVARHVSTFNILLKIE
Sbjct: 181 EYMKKMRELGHPISHLVFNRLIILHSSPRRRNMIPKILAQMRADKVARHVSTFNILLKIE 240

Query: 241 ANDHNIEGLMKVFGDMKRANIEPNEVTYCILATAHAVAKLYCGCETYVEAIEKSKTGNNW 300
           ANDHNIEGLMKVFGDMKRANIEPNEVTYCILATAHAVAKLYCGCETYVEAIEKSKTGNNW
Sbjct: 241 ANDHNIEGLMKVFGDMKRANIEPNEVTYCILATAHAVAKLYCGCETYVEAIEKSKTGNNW 300

Query: 301 STFDVLIILYGYLGKAKEVDRIWSIVQGFPHVRSKSYLLAIEAFGRMGQLNRAEQLWDEC 360
           STFDVLIILYGYLGKAKEVDRIWSIVQGFPHVRSKSYLLAIEAFGRMGQLNRAEQLWDEC
Sbjct: 301 STFDVLIILYGYLGKAKEVDRIWSIVQGFPHVRSKSYLLAIEAFGRMGQLNRAEQLWDEC 360

Query: 361 KPREGMKSTEHYNSMVSVYSRNGFIDKVSGLFKEMNMNGSKPNAITYRHLALGCLKAGLI 420
           KPREGMKSTEHYNSMVSVYSRNGFIDKVSGLFKEMNMNGSKPNAITYRHLALGCLKAGLI
Sbjct: 361 KPREGMKSTEHYNSMVSVYSRNGFIDKVSGLFKEMNMNGSKPNAITYRHLALGCLKAGLI 420

Query: 421 KEALRTIEMGLKQITSSKVKKSTPWLETTLSILEMFADNGDVEIAENLFEELKQANYTRY 480
           KEALRTIEMGLKQITSSKVKKSTPWLETTLSILEMFADNGDVEIAENLFEELKQANYTRY
Sbjct: 421 KEALRTIEMGLKQITSSKVKKSTPWLETTLSILEMFADNGDVEIAENLFEELKQANYTRY 480

Query: 481 AFVYNSLIKAYVRAKFYNPNLLRRMILGGARPDAETYSLIKLVEQFRT 529
           AFVYNSLIKAYVRAKFYNPNLLRRMILGGARPDAETYSLIKLVEQFRT
Sbjct: 481 AFVYNSLIKAYVRAKFYNPNLLRRMILGGARPDAETYSLIKLVEQFRT 528
[Close]
BLAST of Spo19002.1 vs. NCBI nr
Match: gi|731348973|ref|XP_010685762.1| (PREDICTED: pentatricopeptide repeat-containing protein At1g07590, mitochondrial [Beta vulgaris subsp. vulgaris])

HSP 1 Score: 892.5 bits (2305), Expect = 3.600e-256
Identity = 436/528 (82.58%), Postives = 484/528 (91.67%), Query Frame = 1 

		  

Query: 1   MRVIALALGRSVTAAFHRTLGVPLKMSNRVAAFAYCTQTTSEKSELGLKNSSSNGEEALK 60
           MR IALALG  + AAF RTLGVPLK S +   F +CT   SE+ E+GL+NSS NG EA K
Sbjct: 1   MREIALALGHPLFAAFRRTLGVPLKTSYKTTTFTFCTHKISEQIEMGLENSSFNGGEAPK 60

Query: 61  MLSLRIERLPRGESIGYVFQRWMGEGFPVHRGDIFHSINRLRKLKLDRRALEVMEWVIRE 120
           +LSLRIE+LPRGE IGYVFQRWMGEGF VHRGDIFH+INRLRKL L++RALEVMEWVIRE
Sbjct: 61  VLSLRIEKLPRGEPIGYVFQRWMGEGFAVHRGDIFHAINRLRKLMLNKRALEVMEWVIRE 120

Query: 121 KPYRPKELDYSYLLEFTIKLHGISHGERLFTNVPIEFQNDLLYNNLVIACLDKGVVRLSL 180
           KPY+PKELDYSYLLEFTIKLHGIS+GERLFTNVP+EFQNDLLYNNLVIACLDKGV+R+SL
Sbjct: 121 KPYKPKELDYSYLLEFTIKLHGISNGERLFTNVPVEFQNDLLYNNLVIACLDKGVIRVSL 180

Query: 181 EYMKKMRELGHPISHLVFNRLIILHSSPRRRNMIPKILAQMRADKVARHVSTFNILLKIE 240
           EYMKKMRELGHPIS+LVFNRLI+LHSSP RR MIPKILAQMRADKV+ HVSTFNILLKIE
Sbjct: 181 EYMKKMRELGHPISYLVFNRLIVLHSSPSRRKMIPKILAQMRADKVSPHVSTFNILLKIE 240

Query: 241 ANDHNIEGLMKVFGDMKRANIEPNEVTYCILATAHAVAKLYCGCETYVEAIEKSKTGNNW 300
           ANDH+IEGLMKV GDM RAN+EPNEVTYCILATAHAVA+LYCGCETYVEA+EK+KTG+NW
Sbjct: 241 ANDHSIEGLMKVVGDMNRANVEPNEVTYCILATAHAVARLYCGCETYVEAVEKAKTGSNW 300

Query: 301 STFDVLIILYGYLGKAKEVDRIWSIVQGFPHVRSKSYLLAIEAFGRMGQLNRAEQLWDEC 360
           ST+DVLII+YGYLGK+KEVDRIWSIVQGFPHVRSKS++L IEAFGR+GQLNRAE+LW+E 
Sbjct: 301 STYDVLIIMYGYLGKSKEVDRIWSIVQGFPHVRSKSFMLVIEAFGRIGQLNRAEELWEEM 360

Query: 361 KPREGMKSTEHYNSMVSVYSRNGFIDKVSGLFKEMNMNGSKPNAITYRHLALGCLKAGLI 420
           K + G+KSTE YNS++SVY +NG IDKVSGLF+EM ++G KPN ITYRHL LGCLKAGL 
Sbjct: 361 KSKIGLKSTEQYNSIISVYCKNGLIDKVSGLFREMKISGCKPNGITYRHLTLGCLKAGLT 420

Query: 421 KEALRTIEMGLKQITSSKVKKSTPWLETTLSILEMFADNGDVEIAENLFEELKQANYTRY 480
           KEAL+TIEMG KQITSSKVKKSTPWLETTLSILE+FA+NGD+  AENLFEELK+ANYTRY
Sbjct: 421 KEALKTIEMGSKQITSSKVKKSTPWLETTLSILEIFAENGDIGNAENLFEELKKANYTRY 480

Query: 481 AFVYNSLIKAYVRAKFYNPNLLRRMILGGARPDAETYSLIKLVEQFRT 529
            FVYNSLIK YVRAK YNPNLLRRMILGGARPDAETYSL+KLVEQF+T
Sbjct: 481 TFVYNSLIKTYVRAKVYNPNLLRRMILGGARPDAETYSLVKLVEQFKT 528
[Close]
BLAST of Spo19002.1 vs. NCBI nr
Match: gi|870853365|gb|KMT05246.1| (hypothetical protein BVRB_7g173870 [Beta vulgaris subsp. vulgaris])

HSP 1 Score: 847.4 bits (2188), Expect = 1.300e-242
Identity = 410/483 (84.89%), Postives = 454/483 (94.00%), Query Frame = 1 

		  

Query: 46  LGLKNSSSNGEEALKMLSLRIERLPRGESIGYVFQRWMGEGFPVHRGDIFHSINRLRKLK 105
           +GL+NSS NG EA K+LSLRIE+LPRGE IGYVFQRWMGEGF VHRGDIFH+INRLRKL 
Sbjct: 1   MGLENSSFNGGEAPKVLSLRIEKLPRGEPIGYVFQRWMGEGFAVHRGDIFHAINRLRKLM 60

Query: 106 LDRRALEVMEWVIREKPYRPKELDYSYLLEFTIKLHGISHGERLFTNVPIEFQNDLLYNN 165
           L++RALEVMEWVIREKPY+PKELDYSYLLEFTIKLHGIS+GERLFTNVP+EFQNDLLYNN
Sbjct: 61  LNKRALEVMEWVIREKPYKPKELDYSYLLEFTIKLHGISNGERLFTNVPVEFQNDLLYNN 120

Query: 166 LVIACLDKGVVRLSLEYMKKMRELGHPISHLVFNRLIILHSSPRRRNMIPKILAQMRADK 225
           LVIACLDKGV+R+SLEYMKKMRELGHPIS+LVFNRLI+LHSSP RR MIPKILAQMRADK
Sbjct: 121 LVIACLDKGVIRVSLEYMKKMRELGHPISYLVFNRLIVLHSSPSRRKMIPKILAQMRADK 180

Query: 226 VARHVSTFNILLKIEANDHNIEGLMKVFGDMKRANIEPNEVTYCILATAHAVAKLYCGCE 285
           V+ HVSTFNILLKIEANDH+IEGLMKV GDM RAN+EPNEVTYCILATAHAVA+LYCGCE
Sbjct: 181 VSPHVSTFNILLKIEANDHSIEGLMKVVGDMNRANVEPNEVTYCILATAHAVARLYCGCE 240

Query: 286 TYVEAIEKSKTGNNWSTFDVLIILYGYLGKAKEVDRIWSIVQGFPHVRSKSYLLAIEAFG 345
           TYVEA+EK+KTG+NWST+DVLII+YGYLGK+KEVDRIWSIVQGFPHVRSKS++L IEAFG
Sbjct: 241 TYVEAVEKAKTGSNWSTYDVLIIMYGYLGKSKEVDRIWSIVQGFPHVRSKSFMLVIEAFG 300

Query: 346 RMGQLNRAEQLWDECKPREGMKSTEHYNSMVSVYSRNGFIDKVSGLFKEMNMNGSKPNAI 405
           R+GQLNRAE+LW+E K + G+KSTE YNS++SVY +NG IDKVSGLF+EM ++G KPN I
Sbjct: 301 RIGQLNRAEELWEEMKSKIGLKSTEQYNSIISVYCKNGLIDKVSGLFREMKISGCKPNGI 360

Query: 406 TYRHLALGCLKAGLIKEALRTIEMGLKQITSSKVKKSTPWLETTLSILEMFADNGDVEIA 465
           TYRHL LGCLKAGL KEAL+TIEMG KQITSSKVKKSTPWLETTLSILE+FA+NGD+  A
Sbjct: 361 TYRHLTLGCLKAGLTKEALKTIEMGSKQITSSKVKKSTPWLETTLSILEIFAENGDIGNA 420

Query: 466 ENLFEELKQANYTRYAFVYNSLIKAYVRAKFYNPNLLRRMILGGARPDAETYSLIKLVEQ 525
           ENLFEELK+ANYTRY FVYNSLIK YVRAK YNPNLLRRMILGGARPDAETYSL+KLVEQ
Sbjct: 421 ENLFEELKKANYTRYTFVYNSLIKTYVRAKVYNPNLLRRMILGGARPDAETYSLVKLVEQ 480

Query: 526 FRT 529
           F+T
Sbjct: 481 FKT 483
[Close]
BLAST of Spo19002.1 vs. NCBI nr
Match: gi|731392204|ref|XP_002281058.2| (PREDICTED: pentatricopeptide repeat-containing protein At1g07590, mitochondrial [Vitis vinifera])

HSP 1 Score: 753.4 bits (1944), Expect = 2.600e-214
Identity = 371/516 (71.90%), Postives = 439/516 (85.08%), Query Frame = 1 

		  

Query: 15  AFHRTLGVPLKMSNRVAAFAYCTQTT-SEKSELGLKNSSS-NGEEALKMLSLRIERLPRG 74
           +F R +   +  S+ V   AY      +E + L  + SS  N EE  K LS RIE+LPRG
Sbjct: 11  SFFRAIRRTVVFSSPVNQIAYSFNPFGTETAALSFEESSKPNQEEESKSLSWRIEKLPRG 70

Query: 75  ESIGYVFQRWMGEGFPVHRGDIFHSINRLRKLKLDRRALEVMEWVIREKPYRPKELDYSY 134
           E +G  FQ WMGEG P+HRG IFH+INRLRKLK ++RALEVMEWV+RE+PYRPKELDYSY
Sbjct: 71  EPVGLAFQSWMGEGCPIHRGHIFHAINRLRKLKFNKRALEVMEWVVRERPYRPKELDYSY 130

Query: 135 LLEFTIKLHGISHGERLFTNVPIEFQNDLLYNNLVIACLDKGVVRLSLEYMKKMRELGHP 194
           LLEFT KLHGIS GE+LF++VP+EFQN+LLYNNLVIACLDKGV+RLSL YMKKMRELGHP
Sbjct: 131 LLEFTTKLHGISQGEKLFSHVPLEFQNELLYNNLVIACLDKGVIRLSLAYMKKMRELGHP 190

Query: 195 ISHLVFNRLIILHSSPRRRNMIPKILAQMRADKVARHVSTFNILLKIEANDHNIEGLMKV 254
           IS+LVFNRLIILHSSP RR +IP+IL QM+ADKVARHVST+NIL+KIEAN+HNIEGL+KV
Sbjct: 191 ISYLVFNRLIILHSSPHRRKIIPRILTQMKADKVARHVSTYNILMKIEANEHNIEGLVKV 250

Query: 255 FGDMKRANIEPNEVTYCILATAHAVAKLYCGCETYVEAIEKSKTGNNWSTFDVLIILYGY 314
           FG+MK+  +EPNEV+YC+LATAHAVAKLY   E YVEA+EKS TGNNWST DVLIILYGY
Sbjct: 251 FGEMKQQQVEPNEVSYCLLATAHAVAKLYTVAEAYVEAVEKSITGNNWSTLDVLIILYGY 310

Query: 315 LGKAKEVDRIWSIVQGFPHVRSKSYLLAIEAFGRMGQLNRAEQLWDECKPREGMKSTEHY 374
           LGK  +++R W IVQ  PHVRSKSY+LAIEAFGR+GQLNRAE+LW E K ++ +KSTE +
Sbjct: 311 LGKPTDLERTWGIVQELPHVRSKSYMLAIEAFGRIGQLNRAEELWLEIKSKKELKSTEQF 370

Query: 375 NSMVSVYSRNGFIDKVSGLFKEMNMNGSKPNAITYRHLALGCLKAGLIKEALRTIEMGLK 434
           NSM+SVYS++GFIDK SGLF+EM MNG K NAITYR+LALGCLKAGL++EAL+T+E+G  
Sbjct: 371 NSMISVYSKHGFIDKASGLFREMEMNGCKANAITYRNLALGCLKAGLLEEALKTLELGKG 430

Query: 435 QITSSKVKKSTPWLETTLSILEMFADNGDVEIAENLFEELKQANYTRYAFVYNSLIKAYV 494
              S++++KS PWLETTLSI+E+F++NGDVE AE LFEELK ANYTRY FVYN+LIKAYV
Sbjct: 431 LTISTRIRKSIPWLETTLSIVEIFSENGDVENAEKLFEELKTANYTRYTFVYNTLIKAYV 490

Query: 495 RAKFYNPNLLRRMILGGARPDAETYSLIKLVEQFRT 529
           +AK Y+PNLLRRMILGGARPDAETYSL+KL EQF+T
Sbjct: 491 KAKVYDPNLLRRMILGGARPDAETYSLMKLAEQFQT 526
[Close]
BLAST of Spo19002.1 vs. NCBI nr
Match: gi|255584236|ref|XP_002532856.1| (PREDICTED: pentatricopeptide repeat-containing protein At1g07590, mitochondrial [Ricinus communis])

HSP 1 Score: 737.3 bits (1902), Expect = 1.900e-209
Identity = 366/528 (69.32%), Postives = 427/528 (80.87%), Query Frame = 1 

		  

Query: 1   MRVIALALGRSVTAAFHRTLGVPLKMSNRVAAFAYCTQTTSEKSELGLKNSSSNGEEALK 60
           M    L   R  + A HRTL +  +  N       CTQTT  K            EE  K
Sbjct: 1   MHAAVLTGQRRFSQAIHRTLSIAYQ--NHYNFNFLCTQTTDVKIL-----EPEEQEENPK 60

Query: 61  MLSLRIERLPRGESIGYVFQRWMGEGFPVHRGDIFHSINRLRKLKLDRRALEVMEWVIRE 120
            LSLRIE+LPRGE IG  FQ WM EGFP+HRGD+FH+INRLRKLKL++RALEVMEWVIRE
Sbjct: 61  SLSLRIEKLPRGEPIGLAFQSWMREGFPIHRGDVFHAINRLRKLKLNKRALEVMEWVIRE 120

Query: 121 KPYRPKELDYSYLLEFTIKLHGISHGERLFTNVPIEFQNDLLYNNLVIACLDKGVVRLSL 180
           +PYRPKELDYSYLLEFT KLHGISHGE+LFT +P EFQN+LLYNNLVIACL+KGV+RLSL
Sbjct: 121 RPYRPKELDYSYLLEFTTKLHGISHGEKLFTRIPTEFQNELLYNNLVIACLEKGVIRLSL 180

Query: 181 EYMKKMRELGHPISHLVFNRLIILHSSPRRRNMIPKILAQMRADKVARHVSTFNILLKIE 240
           EYMKKMRELGHPISHL+FNRLIILHSSP RR MIPKIL QM+ADKV RHVST+NIL+KIE
Sbjct: 181 EYMKKMRELGHPISHLIFNRLIILHSSPGRRKMIPKILTQMKADKVVRHVSTYNILMKIE 240

Query: 241 ANDHNIEGLMKVFGDMKRANIEPNEVTYCILATAHAVAKLYCGCETYVEAIEKSKTGNNW 300
           AN+HN+EGL+KVFG+MKR  +EPNEV++CILA AHAVA+LY   E YVEA+EKS TG+NW
Sbjct: 241 ANEHNVEGLIKVFGEMKRLEVEPNEVSFCILAIAHAVARLYTVAEAYVEAVEKSYTGDNW 300

Query: 301 STFDVLIILYGYLGKAKEVDRIWSIVQGFPHVRSKSYLLAIEAFGRMGQLNRAEQLWDEC 360
           ST DVLIILYGYL K K++DRIW  V+  PHVRSKSY+LAIEAFGR+GQL RAE+LW E 
Sbjct: 301 STLDVLIILYGYLRKGKKLDRIWGTVKELPHVRSKSYILAIEAFGRIGQLGRAEELWLEM 360

Query: 361 KPREGMKSTEHYNSMVSVYSRNGFIDKVSGLFKEMNMNGSKPNAITYRHLALGCLKAGLI 420
           K  +G+KSTE +NSM+S+Y + G + K + +F+EM+ NG KPNAIT+RHLALGCLKA L+
Sbjct: 361 KSLKGLKSTEQFNSMLSIYCKCGLVKKATDIFREMDRNGCKPNAITFRHLALGCLKAELV 420

Query: 421 KEALRTIEMGLKQITSSKVKKSTPWLETTLSILEMFADNGDVEIAENLFEELKQANYTRY 480
           +EAL+T+EMG+   TS+K+K S PWLETT SI+E+FA+ GDV  AE  FEEL +A Y RY
Sbjct: 421 EEALKTLEMGMDFTTSNKIKNSIPWLETTFSIVEIFAEKGDVANAEKFFEELHKAKYARY 480

Query: 481 AFVYNSLIKAYVRAKFYNPNLLRRMILGGARPDAETYSLIKLVEQFRT 529
            FVYN+LIKAYV+AK Y P LLRRMILGGARPDAETYSLIKL+EQF T
Sbjct: 481 TFVYNTLIKAYVKAKVYVPYLLRRMILGGARPDAETYSLIKLIEQFNT 521
[Close]
BLAST of Spo19002.1 vs. UniProtKB/TrEMBL
Match: A0A0K9QI92_SPIOL (Uncharacterized protein OS=Spinacia oleracea GN=SOVF_176270 PE=4 SV=1)

HSP 1 Score: 1052.0 bits (2719), Expect = 2.500e-304
Identity = 528/528 (100.00%), Postives = 528/528 (100.00%), Query Frame = 1 

		  

Query: 1   MRVIALALGRSVTAAFHRTLGVPLKMSNRVAAFAYCTQTTSEKSELGLKNSSSNGEEALK 60
           MRVIALALGRSVTAAFHRTLGVPLKMSNRVAAFAYCTQTTSEKSELGLKNSSSNGEEALK
Sbjct: 1   MRVIALALGRSVTAAFHRTLGVPLKMSNRVAAFAYCTQTTSEKSELGLKNSSSNGEEALK 60

Query: 61  MLSLRIERLPRGESIGYVFQRWMGEGFPVHRGDIFHSINRLRKLKLDRRALEVMEWVIRE 120
           MLSLRIERLPRGESIGYVFQRWMGEGFPVHRGDIFHSINRLRKLKLDRRALEVMEWVIRE
Sbjct: 61  MLSLRIERLPRGESIGYVFQRWMGEGFPVHRGDIFHSINRLRKLKLDRRALEVMEWVIRE 120

Query: 121 KPYRPKELDYSYLLEFTIKLHGISHGERLFTNVPIEFQNDLLYNNLVIACLDKGVVRLSL 180
           KPYRPKELDYSYLLEFTIKLHGISHGERLFTNVPIEFQNDLLYNNLVIACLDKGVVRLSL
Sbjct: 121 KPYRPKELDYSYLLEFTIKLHGISHGERLFTNVPIEFQNDLLYNNLVIACLDKGVVRLSL 180

Query: 181 EYMKKMRELGHPISHLVFNRLIILHSSPRRRNMIPKILAQMRADKVARHVSTFNILLKIE 240
           EYMKKMRELGHPISHLVFNRLIILHSSPRRRNMIPKILAQMRADKVARHVSTFNILLKIE
Sbjct: 181 EYMKKMRELGHPISHLVFNRLIILHSSPRRRNMIPKILAQMRADKVARHVSTFNILLKIE 240

Query: 241 ANDHNIEGLMKVFGDMKRANIEPNEVTYCILATAHAVAKLYCGCETYVEAIEKSKTGNNW 300
           ANDHNIEGLMKVFGDMKRANIEPNEVTYCILATAHAVAKLYCGCETYVEAIEKSKTGNNW
Sbjct: 241 ANDHNIEGLMKVFGDMKRANIEPNEVTYCILATAHAVAKLYCGCETYVEAIEKSKTGNNW 300

Query: 301 STFDVLIILYGYLGKAKEVDRIWSIVQGFPHVRSKSYLLAIEAFGRMGQLNRAEQLWDEC 360
           STFDVLIILYGYLGKAKEVDRIWSIVQGFPHVRSKSYLLAIEAFGRMGQLNRAEQLWDEC
Sbjct: 301 STFDVLIILYGYLGKAKEVDRIWSIVQGFPHVRSKSYLLAIEAFGRMGQLNRAEQLWDEC 360

Query: 361 KPREGMKSTEHYNSMVSVYSRNGFIDKVSGLFKEMNMNGSKPNAITYRHLALGCLKAGLI 420
           KPREGMKSTEHYNSMVSVYSRNGFIDKVSGLFKEMNMNGSKPNAITYRHLALGCLKAGLI
Sbjct: 361 KPREGMKSTEHYNSMVSVYSRNGFIDKVSGLFKEMNMNGSKPNAITYRHLALGCLKAGLI 420

Query: 421 KEALRTIEMGLKQITSSKVKKSTPWLETTLSILEMFADNGDVEIAENLFEELKQANYTRY 480
           KEALRTIEMGLKQITSSKVKKSTPWLETTLSILEMFADNGDVEIAENLFEELKQANYTRY
Sbjct: 421 KEALRTIEMGLKQITSSKVKKSTPWLETTLSILEMFADNGDVEIAENLFEELKQANYTRY 480

Query: 481 AFVYNSLIKAYVRAKFYNPNLLRRMILGGARPDAETYSLIKLVEQFRT 529
           AFVYNSLIKAYVRAKFYNPNLLRRMILGGARPDAETYSLIKLVEQFRT
Sbjct: 481 AFVYNSLIKAYVRAKFYNPNLLRRMILGGARPDAETYSLIKLVEQFRT 528
[Close]
BLAST of Spo19002.1 vs. UniProtKB/TrEMBL
Match: A0A0J8EQF7_BETVU (Uncharacterized protein OS=Beta vulgaris subsp. vulgaris GN=BVRB_7g173870 PE=4 SV=1)

HSP 1 Score: 847.4 bits (2188), Expect = 9.200e-243
Identity = 410/483 (84.89%), Postives = 454/483 (94.00%), Query Frame = 1 

		  

Query: 46  LGLKNSSSNGEEALKMLSLRIERLPRGESIGYVFQRWMGEGFPVHRGDIFHSINRLRKLK 105
           +GL+NSS NG EA K+LSLRIE+LPRGE IGYVFQRWMGEGF VHRGDIFH+INRLRKL 
Sbjct: 1   MGLENSSFNGGEAPKVLSLRIEKLPRGEPIGYVFQRWMGEGFAVHRGDIFHAINRLRKLM 60

Query: 106 LDRRALEVMEWVIREKPYRPKELDYSYLLEFTIKLHGISHGERLFTNVPIEFQNDLLYNN 165
           L++RALEVMEWVIREKPY+PKELDYSYLLEFTIKLHGIS+GERLFTNVP+EFQNDLLYNN
Sbjct: 61  LNKRALEVMEWVIREKPYKPKELDYSYLLEFTIKLHGISNGERLFTNVPVEFQNDLLYNN 120

Query: 166 LVIACLDKGVVRLSLEYMKKMRELGHPISHLVFNRLIILHSSPRRRNMIPKILAQMRADK 225
           LVIACLDKGV+R+SLEYMKKMRELGHPIS+LVFNRLI+LHSSP RR MIPKILAQMRADK
Sbjct: 121 LVIACLDKGVIRVSLEYMKKMRELGHPISYLVFNRLIVLHSSPSRRKMIPKILAQMRADK 180

Query: 226 VARHVSTFNILLKIEANDHNIEGLMKVFGDMKRANIEPNEVTYCILATAHAVAKLYCGCE 285
           V+ HVSTFNILLKIEANDH+IEGLMKV GDM RAN+EPNEVTYCILATAHAVA+LYCGCE
Sbjct: 181 VSPHVSTFNILLKIEANDHSIEGLMKVVGDMNRANVEPNEVTYCILATAHAVARLYCGCE 240

Query: 286 TYVEAIEKSKTGNNWSTFDVLIILYGYLGKAKEVDRIWSIVQGFPHVRSKSYLLAIEAFG 345
           TYVEA+EK+KTG+NWST+DVLII+YGYLGK+KEVDRIWSIVQGFPHVRSKS++L IEAFG
Sbjct: 241 TYVEAVEKAKTGSNWSTYDVLIIMYGYLGKSKEVDRIWSIVQGFPHVRSKSFMLVIEAFG 300

Query: 346 RMGQLNRAEQLWDECKPREGMKSTEHYNSMVSVYSRNGFIDKVSGLFKEMNMNGSKPNAI 405
           R+GQLNRAE+LW+E K + G+KSTE YNS++SVY +NG IDKVSGLF+EM ++G KPN I
Sbjct: 301 RIGQLNRAEELWEEMKSKIGLKSTEQYNSIISVYCKNGLIDKVSGLFREMKISGCKPNGI 360

Query: 406 TYRHLALGCLKAGLIKEALRTIEMGLKQITSSKVKKSTPWLETTLSILEMFADNGDVEIA 465
           TYRHL LGCLKAGL KEAL+TIEMG KQITSSKVKKSTPWLETTLSILE+FA+NGD+  A
Sbjct: 361 TYRHLTLGCLKAGLTKEALKTIEMGSKQITSSKVKKSTPWLETTLSILEIFAENGDIGNA 420

Query: 466 ENLFEELKQANYTRYAFVYNSLIKAYVRAKFYNPNLLRRMILGGARPDAETYSLIKLVEQ 525
           ENLFEELK+ANYTRY FVYNSLIK YVRAK YNPNLLRRMILGGARPDAETYSL+KLVEQ
Sbjct: 421 ENLFEELKKANYTRYTFVYNSLIKTYVRAKVYNPNLLRRMILGGARPDAETYSLVKLVEQ 480

Query: 526 FRT 529
           F+T
Sbjct: 481 FKT 483
[Close]
BLAST of Spo19002.1 vs. UniProtKB/TrEMBL
Match: F6GV12_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_06s0004g04690 PE=4 SV=1)

HSP 1 Score: 753.4 bits (1944), Expect = 1.800e-214
Identity = 371/516 (71.90%), Postives = 439/516 (85.08%), Query Frame = 1 

		  

Query: 15  AFHRTLGVPLKMSNRVAAFAYCTQTT-SEKSELGLKNSSS-NGEEALKMLSLRIERLPRG 74
           +F R +   +  S+ V   AY      +E + L  + SS  N EE  K LS RIE+LPRG
Sbjct: 11  SFFRAIRRTVVFSSPVNQIAYSFNPFGTETAALSFEESSKPNQEEESKSLSWRIEKLPRG 70

Query: 75  ESIGYVFQRWMGEGFPVHRGDIFHSINRLRKLKLDRRALEVMEWVIREKPYRPKELDYSY 134
           E +G  FQ WMGEG P+HRG IFH+INRLRKLK ++RALEVMEWV+RE+PYRPKELDYSY
Sbjct: 71  EPVGLAFQSWMGEGCPIHRGHIFHAINRLRKLKFNKRALEVMEWVVRERPYRPKELDYSY 130

Query: 135 LLEFTIKLHGISHGERLFTNVPIEFQNDLLYNNLVIACLDKGVVRLSLEYMKKMRELGHP 194
           LLEFT KLHGIS GE+LF++VP+EFQN+LLYNNLVIACLDKGV+RLSL YMKKMRELGHP
Sbjct: 131 LLEFTTKLHGISQGEKLFSHVPLEFQNELLYNNLVIACLDKGVIRLSLAYMKKMRELGHP 190

Query: 195 ISHLVFNRLIILHSSPRRRNMIPKILAQMRADKVARHVSTFNILLKIEANDHNIEGLMKV 254
           IS+LVFNRLIILHSSP RR +IP+IL QM+ADKVARHVST+NIL+KIEAN+HNIEGL+KV
Sbjct: 191 ISYLVFNRLIILHSSPHRRKIIPRILTQMKADKVARHVSTYNILMKIEANEHNIEGLVKV 250

Query: 255 FGDMKRANIEPNEVTYCILATAHAVAKLYCGCETYVEAIEKSKTGNNWSTFDVLIILYGY 314
           FG+MK+  +EPNEV+YC+LATAHAVAKLY   E YVEA+EKS TGNNWST DVLIILYGY
Sbjct: 251 FGEMKQQQVEPNEVSYCLLATAHAVAKLYTVAEAYVEAVEKSITGNNWSTLDVLIILYGY 310

Query: 315 LGKAKEVDRIWSIVQGFPHVRSKSYLLAIEAFGRMGQLNRAEQLWDECKPREGMKSTEHY 374
           LGK  +++R W IVQ  PHVRSKSY+LAIEAFGR+GQLNRAE+LW E K ++ +KSTE +
Sbjct: 311 LGKPTDLERTWGIVQELPHVRSKSYMLAIEAFGRIGQLNRAEELWLEIKSKKELKSTEQF 370

Query: 375 NSMVSVYSRNGFIDKVSGLFKEMNMNGSKPNAITYRHLALGCLKAGLIKEALRTIEMGLK 434
           NSM+SVYS++GFIDK SGLF+EM MNG K NAITYR+LALGCLKAGL++EAL+T+E+G  
Sbjct: 371 NSMISVYSKHGFIDKASGLFREMEMNGCKANAITYRNLALGCLKAGLLEEALKTLELGKG 430

Query: 435 QITSSKVKKSTPWLETTLSILEMFADNGDVEIAENLFEELKQANYTRYAFVYNSLIKAYV 494
              S++++KS PWLETTLSI+E+F++NGDVE AE LFEELK ANYTRY FVYN+LIKAYV
Sbjct: 431 LTISTRIRKSIPWLETTLSIVEIFSENGDVENAEKLFEELKTANYTRYTFVYNTLIKAYV 490

Query: 495 RAKFYNPNLLRRMILGGARPDAETYSLIKLVEQFRT 529
           +AK Y+PNLLRRMILGGARPDAETYSL+KL EQF+T
Sbjct: 491 KAKVYDPNLLRRMILGGARPDAETYSLMKLAEQFQT 526
[Close]
BLAST of Spo19002.1 vs. UniProtKB/TrEMBL
Match: B9T3N7_RICCO (Pentatricopeptide repeat-containing protein, putative OS=Ricinus communis GN=RCOM_1166160 PE=4 SV=1)

HSP 1 Score: 737.3 bits (1902), Expect = 1.300e-209
Identity = 366/528 (69.32%), Postives = 427/528 (80.87%), Query Frame = 1 

		  

Query: 1   MRVIALALGRSVTAAFHRTLGVPLKMSNRVAAFAYCTQTTSEKSELGLKNSSSNGEEALK 60
           M    L   R  + A HRTL +  +  N       CTQTT  K            EE  K
Sbjct: 1   MHAAVLTGQRRFSQAIHRTLSIAYQ--NHYNFNFLCTQTTDVKIL-----EPEEQEENPK 60

Query: 61  MLSLRIERLPRGESIGYVFQRWMGEGFPVHRGDIFHSINRLRKLKLDRRALEVMEWVIRE 120
            LSLRIE+LPRGE IG  FQ WM EGFP+HRGD+FH+INRLRKLKL++RALEVMEWVIRE
Sbjct: 61  SLSLRIEKLPRGEPIGLAFQSWMREGFPIHRGDVFHAINRLRKLKLNKRALEVMEWVIRE 120

Query: 121 KPYRPKELDYSYLLEFTIKLHGISHGERLFTNVPIEFQNDLLYNNLVIACLDKGVVRLSL 180
           +PYRPKELDYSYLLEFT KLHGISHGE+LFT +P EFQN+LLYNNLVIACL+KGV+RLSL
Sbjct: 121 RPYRPKELDYSYLLEFTTKLHGISHGEKLFTRIPTEFQNELLYNNLVIACLEKGVIRLSL 180

Query: 181 EYMKKMRELGHPISHLVFNRLIILHSSPRRRNMIPKILAQMRADKVARHVSTFNILLKIE 240
           EYMKKMRELGHPISHL+FNRLIILHSSP RR MIPKIL QM+ADKV RHVST+NIL+KIE
Sbjct: 181 EYMKKMRELGHPISHLIFNRLIILHSSPGRRKMIPKILTQMKADKVVRHVSTYNILMKIE 240

Query: 241 ANDHNIEGLMKVFGDMKRANIEPNEVTYCILATAHAVAKLYCGCETYVEAIEKSKTGNNW 300
           AN+HN+EGL+KVFG+MKR  +EPNEV++CILA AHAVA+LY   E YVEA+EKS TG+NW
Sbjct: 241 ANEHNVEGLIKVFGEMKRLEVEPNEVSFCILAIAHAVARLYTVAEAYVEAVEKSYTGDNW 300

Query: 301 STFDVLIILYGYLGKAKEVDRIWSIVQGFPHVRSKSYLLAIEAFGRMGQLNRAEQLWDEC 360
           ST DVLIILYGYL K K++DRIW  V+  PHVRSKSY+LAIEAFGR+GQL RAE+LW E 
Sbjct: 301 STLDVLIILYGYLRKGKKLDRIWGTVKELPHVRSKSYILAIEAFGRIGQLGRAEELWLEM 360

Query: 361 KPREGMKSTEHYNSMVSVYSRNGFIDKVSGLFKEMNMNGSKPNAITYRHLALGCLKAGLI 420
           K  +G+KSTE +NSM+S+Y + G + K + +F+EM+ NG KPNAIT+RHLALGCLKA L+
Sbjct: 361 KSLKGLKSTEQFNSMLSIYCKCGLVKKATDIFREMDRNGCKPNAITFRHLALGCLKAELV 420

Query: 421 KEALRTIEMGLKQITSSKVKKSTPWLETTLSILEMFADNGDVEIAENLFEELKQANYTRY 480
           +EAL+T+EMG+   TS+K+K S PWLETT SI+E+FA+ GDV  AE  FEEL +A Y RY
Sbjct: 421 EEALKTLEMGMDFTTSNKIKNSIPWLETTFSIVEIFAEKGDVANAEKFFEELHKAKYARY 480

Query: 481 AFVYNSLIKAYVRAKFYNPNLLRRMILGGARPDAETYSLIKLVEQFRT 529
            FVYN+LIKAYV+AK Y P LLRRMILGGARPDAETYSLIKL+EQF T
Sbjct: 481 TFVYNTLIKAYVKAKVYVPYLLRRMILGGARPDAETYSLIKLIEQFNT 521
[Close]
BLAST of Spo19002.1 vs. UniProtKB/TrEMBL
Match: A0A068ULD6_COFCA (Uncharacterized protein OS=Coffea canephora GN=GSCOC_T00028237001 PE=4 SV=1)

HSP 1 Score: 730.3 bits (1884), Expect = 1.600e-207
Identity = 357/536 (66.60%), Postives = 438/536 (81.72%), Query Frame = 1 

		  

Query: 1   MRVIALALGRSVTAAFHRTLGVPLKMSNRVAAFA--YCTQTTSEKSEL--------GLKN 60
           M+++A+   +SV  A  RT+ VPL        F   +CTQT  EK  L          + 
Sbjct: 1   MQIVAVVHKQSVLRAIRRTIAVPLCSPRHFRCFGPNFCTQT--EKPTLIPCPETSDSERE 60

Query: 61  SSSNGEEALKMLSLRIERLPRGESIGYVFQRWMGEGFPVHRGDIFHSINRLRKLKLDRRA 120
            + N E   K LS RIE+LPRGE +   FQ WM +GFP+HRGDIFH+INRLRK K ++RA
Sbjct: 61  QAENEEGEAKSLSWRIEKLPRGEPVASAFQSWMRDGFPIHRGDIFHTINRLRKFKANKRA 120

Query: 121 LEVMEWVIREKPYRPKELDYSYLLEFTIKLHGISHGERLFTNVPIEFQNDLLYNNLVIAC 180
           LEVMEWVIRE+P+RPKELDYSYLLEFT KLHG+S GE LF+ +P E+QN+LLYNNLV+AC
Sbjct: 121 LEVMEWVIRERPFRPKELDYSYLLEFTTKLHGVSKGESLFSRIPSEYQNELLYNNLVLAC 180

Query: 181 LDKGVVRLSLEYMKKMRELGHPISHLVFNRLIILHSSPRRRNMIPKILAQMRADKVARHV 240
           LDKG++RLSL YMKKMRELGHPIS+LVFNRLIILHSSP R+  I KIL QMRADKV +HV
Sbjct: 181 LDKGLIRLSLSYMKKMRELGHPISYLVFNRLIILHSSPGRKKTIQKILTQMRADKVVQHV 240

Query: 241 STFNILLKIEANDHNIEGLMKVFGDMKRANIEPNEVTYCILATAHAVAKLYCGCETYVEA 300
           ST+NILLKIEANDHNIE L KVFGDMK+AN+EPNE++YCILATAHAVA+L   C+ YVEA
Sbjct: 241 STYNILLKIEANDHNIERLAKVFGDMKQANVEPNEISYCILATAHAVARLSTVCKAYVEA 300

Query: 301 IEKSKTGNNWSTFDVLIILYGYLGKAKEVDRIWSIVQGFPHVRSKSYLLAIEAFGRMGQL 360
           IEKS +GNNWST+D+L+ILYGYLG   +++RIWSI+QG P+VRSKS++LA+EAFGR+G +
Sbjct: 301 IEKSTSGNNWSTYDILVILYGYLGMRTQLERIWSIIQGLPNVRSKSFVLAVEAFGRIGDI 360

Query: 361 NRAEQLWDECKPREGMKSTEHYNSMVSVYSRNGFIDKVSGLFKEMNMNGSKPNAITYRHL 420
           NRAE+LW E K  +G+KSTE  NS++SVY ++GFI K + L+KEM  NG KPNAIT+RHL
Sbjct: 361 NRAEELWAEMKLVKGLKSTEQLNSLISVYCKHGFITKATSLYKEMEKNGCKPNAITFRHL 420

Query: 421 ALGCLKAGLIKEALRTIEMGLKQITSSKVKKSTPWLETTLSILEMFADNGDVEIAENLFE 480
           ALGCLKAGL  EA++T+E+G+    S KV++STPWLETTLSIL++FAD+GDVE AE LFE
Sbjct: 421 ALGCLKAGLRNEAIKTLELGMDISVSMKVRRSTPWLETTLSILDIFADDGDVENAEKLFE 480

Query: 481 ELKQANYTRYAFVYNSLIKAYVRAKFYNPNLLRRMILGGARPDAETYSLIKLVEQF 527
           ELK+ANY+RY FVYN+LIKAYV+AK ++PNLL+RMILGG+RPD+ETYSL+KL+EQF
Sbjct: 481 ELKKANYSRYTFVYNTLIKAYVKAKLHDPNLLKRMILGGSRPDSETYSLLKLIEQF 534
[Close]
BLAST of Spo19002.1 vs. ExPASy Swiss-Prot
Match: PPR19_ARATH (Pentatricopeptide repeat-containing protein At1g07590, mitochondrial OS=Arabidopsis thaliana GN=At1g07590 PE=2 SV=1)

HSP 1 Score: 659.8 bits (1701), Expect = 2.400e-188
Identity = 323/505 (63.96%), Postives = 404/505 (80.00%), Query Frame = 1 

		  

Query: 24  LKMSNRVAAFAYCTQTTSEKS-ELGLKNSSSNGEEALKMLSLRIERLPRGESIGYVFQRW 83
           L  +N  A+    T  +S+KS E     S    EE  K LSLRIE+LP+G ++G   Q W
Sbjct: 29  LNQTNFQASSFLTTLISSKKSPEETCIGSEEEEEEPNKCLSLRIEKLPKGVTVGSALQSW 88

Query: 84  MGEGFPVHRGDIFHSINRLRKLKLDRRALEVMEWVIREKPYRPKELDYSYLLEFTIKLHG 143
           MG+GFPVH GD++H+INRLRKL  ++RALE+MEW+IRE+PYR  EL+YSYLLEFT+KLHG
Sbjct: 89  MGDGFPVHGGDVYHAINRLRKLGRNKRALELMEWIIRERPYRLGELEYSYLLEFTVKLHG 148

Query: 144 ISHGERLFTNVPIEFQNDLLYNNLVIACLDKGVVRLSLEYMKKMRELGHPISHLVFNRLI 203
           +S GE+LFT VP EFQN+LLYNNLVIACLD+GV+RL+LEYMKKMRELG+  SHLV+NRLI
Sbjct: 149 VSQGEKLFTRVPQEFQNELLYNNLVIACLDQGVIRLALEYMKKMRELGYRTSHLVYNRLI 208

Query: 204 ILHSSPRRRNMIPKILAQMRADKVARHVSTFNILLKIEANDHNIEGLMKVFGDMKRANIE 263
           I +S+P RR +I K LA M+ADK   HVST++IL+K+EAN+HNI+G++K F  MK+A +E
Sbjct: 209 IRNSAPGRRKLIAKDLALMKADKATPHVSTYHILMKLEANEHNIDGVLKAFDGMKKAGVE 268

Query: 264 PNEVTYCILATAHAVAKLYCGCETYVEAIEKSKTGNNWSTFDVLIILYGYLGKAKEVDRI 323
           PNEV+YCILA AHAVA+LY   E Y E IEKS TG+NWST D+L+ILYG LGK KE+ R 
Sbjct: 269 PNEVSYCILAMAHAVARLYTVAEAYTEEIEKSITGDNWSTLDILMILYGRLGKEKELART 328

Query: 324 WSIVQGFPHVRSKSYLLAIEAFGRMGQLNRAEQLWDECKPREGMKSTEHYNSMVSVYSRN 383
           W++++GF HVRSKSYLLA EAF R+G L+RAE+LW E K  +G+K TE +NS++SVY ++
Sbjct: 329 WNVIRGFHHVRSKSYLLATEAFARVGNLDRAEELWLEMKNVKGLKETEQFNSLLSVYCKD 388

Query: 384 GFIDKVSGLFKEMNMNGSKPNAITYRHLALGCLKAGLIKEALRTIEMGLKQITSSKVKKS 443
           G I+K  G+F+EM  NG KPN+ITYRHLALGC KA L+KEAL+ IEMGL   TS  +  S
Sbjct: 389 GLIEKAIGVFREMTGNGFKPNSITYRHLALGCAKAKLMKEALKNIEMGLNLKTSKSIGSS 448

Query: 444 TPWLETTLSILEMFADNGDVEIAENLFEELKQANYTRYAFVYNSLIKAYVRAKFYNPNLL 503
           TPWLETTLSI+E FA+ GDVE +E LFEE+K A Y RYAFVYN+L KAYV+AK Y+PNL 
Sbjct: 449 TPWLETTLSIIECFAEKGDVENSEKLFEEVKNAKYNRYAFVYNALFKAYVKAKVYDPNLF 508

Query: 504 RRMILGGARPDAETYSLIKLVEQFR 528
           +RM+LGGARPDAE+YSL+KLVEQ++
Sbjct: 509 KRMVLGGARPDAESYSLLKLVEQYK 533
[Close]
BLAST of Spo19002.1 vs. ExPASy Swiss-Prot
Match: PP135_ARATH (Pentatricopeptide repeat-containing protein At1g80270, mitochondrial OS=Arabidopsis thaliana GN=At1g80270 PE=2 SV=1)

HSP 1 Score: 188.0 bits (476), Expect = 2.700e-46
Identity = 113/424 (26.65%), Postives = 218/424 (51.42%), Query Frame = 1 

		  

Query: 72  GESIGYVFQRWMGEGFPVHRGDIFHSINRLRKLKLDRRALEVMEWVIREKPYRPKELDYS 131
           G SIG    +W+ EG  + R +I  ++ +LR+ ++  RAL++ EW+   K     E DY+
Sbjct: 141 GLSIGSALDKWVEEGNEITRVEIAKAMLQLRRRRMYGRALQMSEWLEANKKIEMTERDYA 200

Query: 132 YLLEFTIKLHGISHGERLFTNVPIEFQNDLLYNNLVIACLDKGVVRLSLEYMKKMRELGH 191
             L+ T+K+ G+  GE     +P  F+ ++LY  L+  C+  G V+ S     KM++LG 
Sbjct: 201 SRLDLTVKIRGLEKGEACMQKIPKSFKGEVLYRTLLANCVAAGNVKKSELVFNKMKDLGF 260

Query: 192 PISHLVFNRLIILHSSPRRRNMIPKILAQMRADKVARHVSTFNILLKIEANDHNIEGLMK 251
           P+S    +++++LH    R+  I  +L  M  + +   + T+ IL+ ++   ++I G+ +
Sbjct: 261 PLSGFTCDQMLLLHKRIDRKK-IADVLLLMEKENIKPSLLTYKILIDVKGATNDISGMEQ 320

Query: 252 VFGDMKRANIEPNEVTYCILATAHAVAKLYCGCETYVEAIEKSKTGNNWSTFDVLIILYG 311
           +   MK   +E +  T  + A  ++ A L    E  ++ +E      N   F  L+ +Y 
Sbjct: 321 ILETMKDEGVELDFQTQALTARHYSGAGLKDKAEKVLKEMEGESLEANRRAFKDLLSIYA 380

Query: 312 YLGKAKEVDRIWSIVQGFPHVRSKSYLLAIEAFGRMGQLNRAEQLWDECKPREGMKSTEH 371
            LG+  EV RIW I +  P+      L AI+AFG++ ++  AE ++++    +   S+  
Sbjct: 381 SLGREDEVKRIWKICESKPYFEES--LAAIQAFGKLNKVQEAEAIFEKIVKMDRRASSST 440

Query: 372 YNSMVSVYSRNGFIDKVSGLFKEMNMNGSKPNAITYRHLALGCLKAGLIKEALRTIEMGL 431
           Y+ ++ VY  +  + K   L K M  +G +  A T+  L    ++AG +++A   ++   
Sbjct: 441 YSVLLRVYVDHKMLSKGKDLVKRMAESGCRIEATTWDALIKLYVEAGEVEKADSLLDKAS 500

Query: 432 KQITSSKVKKSTPWLETTLSILEMFADNGDVEIAENLFEELKQANYTRYAFVYNSLIKAY 491
           KQ  +  +      + + + I++ ++  GDV   E +F ++++A YT     + +L++AY
Sbjct: 501 KQSHTKLM------MNSFMYIMDEYSKRGDVHNTEKIFLKMREAGYTSRLRQFQALMQAY 555

Query: 492 VRAK 496
           + AK
Sbjct: 561 INAK 555
[Close]
BLAST of Spo19002.1 vs. ExPASy Swiss-Prot
Match: PPR44_ARATH (Pentatricopeptide repeat-containing protein At1g15480, mitochondrial OS=Arabidopsis thaliana GN=At1g15480 PE=2 SV=2)

HSP 1 Score: 177.9 bits (450), Expect = 2.800e-43
Identity = 125/500 (25.00%), Postives = 240/500 (48.00%), Query Frame = 1 

		  

Query: 40  TSEKSELGLKNSSSNGEEALKMLSLRIERLPR------------GESIGYVFQRWMGEGF 99
           TS  SE G + S   G+     L L +    R            G S+G    +W+ +G 
Sbjct: 95  TSSDSEDGEEFSGDEGDIEGAELELHVPESKRPSEMFKAIVSVSGLSVGSALDKWVEQGK 154

Query: 100 PVHRGDIFHSINRLRKLKLDRRALEVMEWVIREKPYRPKELDYSYLLEFTIKLHGISHGE 159
             +R +   ++ +LRK ++  RAL++ EW+   K +  +E DY+  L+   K+ G   GE
Sbjct: 155 DTNRKEFESAMLQLRKRRMFGRALQMTEWLDENKQFEMEERDYACRLDLISKVRGWYKGE 214

Query: 160 RLFTNVPIEFQNDLLYNNLVIACLDKGVVRLSLEYMKKMRELGHPISHLVFNRLIILHSS 219
                +P  F+ +L+Y  L+   +    VR +     KM++LG P+S    N+++IL+  
Sbjct: 215 AYIKTIPESFRGELVYRTLLANHVATSNVRTAEAVFNKMKDLGFPLSTFTCNQMLILYKR 274

Query: 220 PRRRNMIPKILAQMRADKVARHVSTFNILLKIEANDHNIEGLMKVFGDMKRANIEPNEVT 279
             ++  I  +L  +  + +  +++T+ IL+  + + ++I G+ ++   MK   +E +   
Sbjct: 275 VDKKK-IADVLLLLEKENLKPNLNTYKILIDTKGSSNDITGMEQIVETMKSEGVELDLRA 334

Query: 280 YCILATAHAVAKLYCGCETYVEAIEKSKTGNNWSTFDVLIILYGYLGKAKEVDRIWSIVQ 339
             ++A  +A A L    E  ++ +E      N      L+ +YGYL +  EV R+W I +
Sbjct: 335 RALIARHYASAGLKEKAEKVLKEMEGESLEENRHMCKDLLSVYGYLQREDEVRRVWKICE 394

Query: 340 GFPHVRSKSYLLAIEAFGRMGQLNRAEQLWDECKPREGMKSTEHYNSMVSVYSRNGFIDK 399
             P  R    L AI AFG++ ++  AE ++++        S+  Y+ ++ VY  +  + +
Sbjct: 395 ENP--RYNEVLAAILAFGKIDKVKDAEAVFEKVLKMSHRVSSNVYSVLLRVYVDHKMVSE 454

Query: 400 VSGLFKEMNMNGSKPNAITYRHLALGCLKAGLIKEALRTIEMGLKQITSSKVKKSTPWLE 459
              L K+M+ +G    A+T+  +    ++AG +++A  ++    K I S ++K   P + 
Sbjct: 455 GKDLVKQMSDSGCNIGALTWDAVIKLYVEAGEVEKAESSLS---KAIQSKQIK---PLMS 514

Query: 460 TTLSILEMFADNGDVEIAENLFEELKQANYTRYAFVYNSLIKAYVRAKFYNPNLLRRMIL 519
           + + ++  +   GDV   E +F+ +KQA Y    + Y +LI+AYV AK     +  RM  
Sbjct: 515 SFMYLMHEYVRRGDVHNTEKIFQRMKQAGYQSRFWAYQTLIQAYVNAKAPAYGMKERMKA 574

Query: 520 GGARPDAETYSLIKLVEQFR 528
               P+    + +   + F+
Sbjct: 575 DNIFPNKRLAAQLAKADPFK 585
[Close]
BLAST of Spo19002.1 vs. ExPASy Swiss-Prot
Match: PP234_ARATH (Pentatricopeptide repeat-containing protein At3g15590, mitochondrial OS=Arabidopsis thaliana GN=At3g15590 PE=2 SV=1)

HSP 1 Score: 152.5 bits (384), Expect = 1.300e-35
Identity = 118/484 (24.38%), Postives = 224/484 (46.28%), Query Frame = 1 

		  

Query: 45  ELGLKNSSSNGEEALKMLSLRI-ERLPRGESIGYVFQRWMGEGFPVHRGDIFHSINRLRK 104
           E+  K+S   G+   K     + E +   +S+ +V ++W+ EG  + + ++  +I+ LRK
Sbjct: 126 EIEEKHSKDGGKPTKKRGQSELYESIVAYKSVKHVLEKWVKEGKDLSQAEVTLAIHNLRK 185

Query: 105 LKLDRRALEVMEWVIREKPYRPKELDYSYLLEFTIKLHGISHGERLFTNVPIEFQNDLLY 164
            K     L++ EW+     +   E +Y+  L+   K+H +   E    ++P   + +++Y
Sbjct: 186 RKSYAMCLQLWEWLGANTQFEFTEANYASQLDLVAKVHSLQKAEIFLKDIPESSRGEVVY 245

Query: 165 NNLVIACLDKGVVRLSLEYMKKMRELGHPISHLVFNRLIILHSSPRRRNMIPKILAQMRA 224
             L+  C+ K  V  + +   KM+EL  P S    N+L++L+S   R+  I  +L  M  
Sbjct: 246 RTLLANCVLKHHVNKAEDIFNKMKELKFPTSVFACNQLLLLYSMHDRKK-ISDVLLLMER 305

Query: 225 DKVARHVSTFNILLKIEANDHNIEGLMKVFGDMKRANIEPNEVTYCILATAHAVAKLYCG 284
           + +    +T++ L+  +    +I G+ K+   +K   IE +     ILA  +  A L   
Sbjct: 306 ENIKPSRATYHFLINSKGLAGDITGMEKIVETIKEEGIELDPELQSILAKYYIRAGLKER 365

Query: 285 CETYVEAIEKSKTGNNWSTFDVLIILYGYLGKAKEVDRIWSIVQGFPHVRSKSYLLAIEA 344
            +  ++ IE             L+ LY  +G +  V R+   V   P  R  + + AI+A
Sbjct: 366 AQDLMKEIEGKGLQQTPWVCRSLLPLYADIGDSDNVRRLSRFVDQNP--RYDNCISAIKA 425

Query: 345 FGRMGQLNRAEQLWDECKPREGMKSTEHYNSMVSVYSRNGFIDKVSGLFKEMNMNGSKPN 404
           +G++ ++  AE +++    +  +     Y +++ +Y+ N  + K   L K M   G    
Sbjct: 426 WGKLKEVEEAEAVFERLVEKYKIFPMMPYFALMEIYTENKMLAKGRDLVKRMGNAGIAIG 485

Query: 405 AITYRHLALGCLKAGLIKEALRTIEMGLKQITSSKVKKSTPWLETTLSILEMFADNGDVE 464
             T+  L    +KAG + +A    E+ L + T  K  K  P   T ++ILE +A  GDV 
Sbjct: 486 PSTWHALVKLYIKAGEVGKA----ELILNRAT--KDNKMRPMFTTYMAILEEYAKRGDVH 545

Query: 465 IAENLFEELKQANYTRYAFVYNSLIKAYVRAKFYNPNLLRRMILGGARPDAETYSLIKLV 524
             E +F ++K+A+Y      Y +++ AY+ AK     ++ RM      P+    + +  V
Sbjct: 546 NTEKVFMKMKRASYAAQLMQYETVLLAYINAKTPAYGMIERMKADNVFPNKSLAAKLAQV 600

Query: 525 EQFR 528
             F+
Sbjct: 606 NPFK 600
[Close]
BLAST of Spo19002.1 vs. ExPASy Swiss-Prot
Match: PPR86_ARATH (Pentatricopeptide repeat-containing protein At1g60770 OS=Arabidopsis thaliana GN=At1g60770 PE=2 SV=1)

HSP 1 Score: 149.8 bits (377), Expect = 8.200e-35
Identity = 114/439 (25.97%), Postives = 203/439 (46.24%), Query Frame = 1 

		  

Query: 89  VHRGDIFHSINRLRKLKLDRRALEVMEWVIREKPYRPKELDYSYLLEFTIKLHGISHGER 148
           V + ++  +I +LR   L   AL++ E V+ E+       D +  L+   K   I+ GE 
Sbjct: 53  VFKWEVGDTIKKLRNRGLYYPALKLSE-VMEERGMNKTVSDQAIHLDLVAKAREITAGEN 112

Query: 149 LFTNVPIEFQNDLLYNNLVIACLDKGVVRLSLEYMKKMRELGHPISHLVFNRLIILHSSP 208
            F ++P   + +L Y +L+     + +   +   + KM+EL    S + +N L+ L++  
Sbjct: 113 YFVDLPETSKTELTYGSLLNCYCKELLTEKAEGLLNKMKELNITPSSMSYNSLMTLYTKT 172

Query: 209 RRRNMIPKILAQMRADKVARHVSTFNILLKIEANDHNIEGLMKVFGDMKR-ANIEPNEVT 268
                +P ++ +++A+ V     T+N+ ++  A  ++I G+ +V  +M R   + P+  T
Sbjct: 173 GETEKVPAMIQELKAENVMPDSYTYNVWMRALAATNDISGVERVIEEMNRDGRVAPDWTT 232

Query: 269 YCILATAHAVAKLYCGCETYVEAIEKSKTGNNWSTFDVLIILYGYLGKAKEVDRIW-SIV 328
           Y  +A+ +  A L    E  ++ +E   T  +++ +  LI LYG LGK  EV RIW S+ 
Sbjct: 233 YSNMASIYVDAGLSQKAEKALQELEMKNTQRDFTAYQFLITLYGRLGKLTEVYRIWRSLR 292

Query: 329 QGFPHVRSKSYLLAIEAFGRMGQLNRAEQLWDECKPREGMKSTEHYNSMVSVYSRNGFID 388
              P   + +YL  I+   ++  L  AE L+ E +           N ++  Y++ G I 
Sbjct: 293 LAIPKTSNVAYLNMIQVLVKLNDLPGAETLFKEWQANCSTYDIRIVNVLIGAYAQEGLIQ 352

Query: 389 KVSGLFKEMNMNGSKPNAITYRHLALGCLKAGLIKEALRTIEMGLKQITSSKVKKSTPWL 448
           K + L ++    G K NA T+       +K+G +  AL  +   +  I      K  P  
Sbjct: 353 KANELKEKAPRRGGKLNAKTWEIFMDYYVKSGDMARALECMSKAV-SIGKGDGGKWLPSP 412

Query: 449 ETTLSILEMFADNGDVEIAENLFEELKQANYTRYAFVYNSLIKAYVRAKFYNPNLLRRMI 508
           ET  +++  F    DV  AENL E LK       A ++  LI+ Y  A   +P + RR+ 
Sbjct: 413 ETVRALMSYFEQKKDVNGAENLLEILKNGTDNIGAEIFEPLIRTYAAAGKSHPAMRRRLK 472

Query: 509 LGGARPDAETYSLIKLVEQ 526
           +     +  T  L+  V Q
Sbjct: 473 MENVEVNEATKKLLDEVSQ 489
[Close]
BLAST of Spo19002.1 vs. TAIR (Arabidopsis)
Match: AT1G07590.1 (Tetratricopeptide repeat (TPR)-like superfamily protein)

HSP 1 Score: 659.8 bits (1701), Expect = 1.400e-189
Identity = 323/505 (63.96%), Postives = 404/505 (80.00%), Query Frame = 1 

		  

Query: 24  LKMSNRVAAFAYCTQTTSEKS-ELGLKNSSSNGEEALKMLSLRIERLPRGESIGYVFQRW 83
           L  +N  A+    T  +S+KS E     S    EE  K LSLRIE+LP+G ++G   Q W
Sbjct: 29  LNQTNFQASSFLTTLISSKKSPEETCIGSEEEEEEPNKCLSLRIEKLPKGVTVGSALQSW 88

Query: 84  MGEGFPVHRGDIFHSINRLRKLKLDRRALEVMEWVIREKPYRPKELDYSYLLEFTIKLHG 143
           MG+GFPVH GD++H+INRLRKL  ++RALE+MEW+IRE+PYR  EL+YSYLLEFT+KLHG
Sbjct: 89  MGDGFPVHGGDVYHAINRLRKLGRNKRALELMEWIIRERPYRLGELEYSYLLEFTVKLHG 148

Query: 144 ISHGERLFTNVPIEFQNDLLYNNLVIACLDKGVVRLSLEYMKKMRELGHPISHLVFNRLI 203
           +S GE+LFT VP EFQN+LLYNNLVIACLD+GV+RL+LEYMKKMRELG+  SHLV+NRLI
Sbjct: 149 VSQGEKLFTRVPQEFQNELLYNNLVIACLDQGVIRLALEYMKKMRELGYRTSHLVYNRLI 208

Query: 204 ILHSSPRRRNMIPKILAQMRADKVARHVSTFNILLKIEANDHNIEGLMKVFGDMKRANIE 263
           I +S+P RR +I K LA M+ADK   HVST++IL+K+EAN+HNI+G++K F  MK+A +E
Sbjct: 209 IRNSAPGRRKLIAKDLALMKADKATPHVSTYHILMKLEANEHNIDGVLKAFDGMKKAGVE 268

Query: 264 PNEVTYCILATAHAVAKLYCGCETYVEAIEKSKTGNNWSTFDVLIILYGYLGKAKEVDRI 323
           PNEV+YCILA AHAVA+LY   E Y E IEKS TG+NWST D+L+ILYG LGK KE+ R 
Sbjct: 269 PNEVSYCILAMAHAVARLYTVAEAYTEEIEKSITGDNWSTLDILMILYGRLGKEKELART 328

Query: 324 WSIVQGFPHVRSKSYLLAIEAFGRMGQLNRAEQLWDECKPREGMKSTEHYNSMVSVYSRN 383
           W++++GF HVRSKSYLLA EAF R+G L+RAE+LW E K  +G+K TE +NS++SVY ++
Sbjct: 329 WNVIRGFHHVRSKSYLLATEAFARVGNLDRAEELWLEMKNVKGLKETEQFNSLLSVYCKD 388

Query: 384 GFIDKVSGLFKEMNMNGSKPNAITYRHLALGCLKAGLIKEALRTIEMGLKQITSSKVKKS 443
           G I+K  G+F+EM  NG KPN+ITYRHLALGC KA L+KEAL+ IEMGL   TS  +  S
Sbjct: 389 GLIEKAIGVFREMTGNGFKPNSITYRHLALGCAKAKLMKEALKNIEMGLNLKTSKSIGSS 448

Query: 444 TPWLETTLSILEMFADNGDVEIAENLFEELKQANYTRYAFVYNSLIKAYVRAKFYNPNLL 503
           TPWLETTLSI+E FA+ GDVE +E LFEE+K A Y RYAFVYN+L KAYV+AK Y+PNL 
Sbjct: 449 TPWLETTLSIIECFAEKGDVENSEKLFEEVKNAKYNRYAFVYNALFKAYVKAKVYDPNLF 508

Query: 504 RRMILGGARPDAETYSLIKLVEQFR 528
           +RM+LGGARPDAE+YSL+KLVEQ++
Sbjct: 509 KRMVLGGARPDAESYSLLKLVEQYK 533
[Close]
BLAST of Spo19002.1 vs. TAIR (Arabidopsis)
Match: AT1G80270.1 (PENTATRICOPEPTIDE REPEAT 596)

HSP 1 Score: 188.0 bits (476), Expect = 1.500e-47
Identity = 113/424 (26.65%), Postives = 218/424 (51.42%), Query Frame = 1 

		  

Query: 72  GESIGYVFQRWMGEGFPVHRGDIFHSINRLRKLKLDRRALEVMEWVIREKPYRPKELDYS 131
           G SIG    +W+ EG  + R +I  ++ +LR+ ++  RAL++ EW+   K     E DY+
Sbjct: 141 GLSIGSALDKWVEEGNEITRVEIAKAMLQLRRRRMYGRALQMSEWLEANKKIEMTERDYA 200

Query: 132 YLLEFTIKLHGISHGERLFTNVPIEFQNDLLYNNLVIACLDKGVVRLSLEYMKKMRELGH 191
             L+ T+K+ G+  GE     +P  F+ ++LY  L+  C+  G V+ S     KM++LG 
Sbjct: 201 SRLDLTVKIRGLEKGEACMQKIPKSFKGEVLYRTLLANCVAAGNVKKSELVFNKMKDLGF 260

Query: 192 PISHLVFNRLIILHSSPRRRNMIPKILAQMRADKVARHVSTFNILLKIEANDHNIEGLMK 251
           P+S    +++++LH    R+  I  +L  M  + +   + T+ IL+ ++   ++I G+ +
Sbjct: 261 PLSGFTCDQMLLLHKRIDRKK-IADVLLLMEKENIKPSLLTYKILIDVKGATNDISGMEQ 320

Query: 252 VFGDMKRANIEPNEVTYCILATAHAVAKLYCGCETYVEAIEKSKTGNNWSTFDVLIILYG 311
           +   MK   +E +  T  + A  ++ A L    E  ++ +E      N   F  L+ +Y 
Sbjct: 321 ILETMKDEGVELDFQTQALTARHYSGAGLKDKAEKVLKEMEGESLEANRRAFKDLLSIYA 380

Query: 312 YLGKAKEVDRIWSIVQGFPHVRSKSYLLAIEAFGRMGQLNRAEQLWDECKPREGMKSTEH 371
            LG+  EV RIW I +  P+      L AI+AFG++ ++  AE ++++    +   S+  
Sbjct: 381 SLGREDEVKRIWKICESKPYFEES--LAAIQAFGKLNKVQEAEAIFEKIVKMDRRASSST 440

Query: 372 YNSMVSVYSRNGFIDKVSGLFKEMNMNGSKPNAITYRHLALGCLKAGLIKEALRTIEMGL 431
           Y+ ++ VY  +  + K   L K M  +G +  A T+  L    ++AG +++A   ++   
Sbjct: 441 YSVLLRVYVDHKMLSKGKDLVKRMAESGCRIEATTWDALIKLYVEAGEVEKADSLLDKAS 500

Query: 432 KQITSSKVKKSTPWLETTLSILEMFADNGDVEIAENLFEELKQANYTRYAFVYNSLIKAY 491
           KQ  +  +      + + + I++ ++  GDV   E +F ++++A YT     + +L++AY
Sbjct: 501 KQSHTKLM------MNSFMYIMDEYSKRGDVHNTEKIFLKMREAGYTSRLRQFQALMQAY 555

Query: 492 VRAK 496
           + AK
Sbjct: 561 INAK 555
[Close]
BLAST of Spo19002.1 vs. TAIR (Arabidopsis)
Match: AT1G15480.1 (Tetratricopeptide repeat (TPR)-like superfamily protein)

HSP 1 Score: 177.9 bits (450), Expect = 1.600e-44
Identity = 125/500 (25.00%), Postives = 240/500 (48.00%), Query Frame = 1 

		  

Query: 40  TSEKSELGLKNSSSNGEEALKMLSLRIERLPR------------GESIGYVFQRWMGEGF 99
           TS  SE G + S   G+     L L +    R            G S+G    +W+ +G 
Sbjct: 95  TSSDSEDGEEFSGDEGDIEGAELELHVPESKRPSEMFKAIVSVSGLSVGSALDKWVEQGK 154

Query: 100 PVHRGDIFHSINRLRKLKLDRRALEVMEWVIREKPYRPKELDYSYLLEFTIKLHGISHGE 159
             +R +   ++ +LRK ++  RAL++ EW+   K +  +E DY+  L+   K+ G   GE
Sbjct: 155 DTNRKEFESAMLQLRKRRMFGRALQMTEWLDENKQFEMEERDYACRLDLISKVRGWYKGE 214

Query: 160 RLFTNVPIEFQNDLLYNNLVIACLDKGVVRLSLEYMKKMRELGHPISHLVFNRLIILHSS 219
                +P  F+ +L+Y  L+   +    VR +     KM++LG P+S    N+++IL+  
Sbjct: 215 AYIKTIPESFRGELVYRTLLANHVATSNVRTAEAVFNKMKDLGFPLSTFTCNQMLILYKR 274

Query: 220 PRRRNMIPKILAQMRADKVARHVSTFNILLKIEANDHNIEGLMKVFGDMKRANIEPNEVT 279
             ++  I  +L  +  + +  +++T+ IL+  + + ++I G+ ++   MK   +E +   
Sbjct: 275 VDKKK-IADVLLLLEKENLKPNLNTYKILIDTKGSSNDITGMEQIVETMKSEGVELDLRA 334

Query: 280 YCILATAHAVAKLYCGCETYVEAIEKSKTGNNWSTFDVLIILYGYLGKAKEVDRIWSIVQ 339
             ++A  +A A L    E  ++ +E      N      L+ +YGYL +  EV R+W I +
Sbjct: 335 RALIARHYASAGLKEKAEKVLKEMEGESLEENRHMCKDLLSVYGYLQREDEVRRVWKICE 394

Query: 340 GFPHVRSKSYLLAIEAFGRMGQLNRAEQLWDECKPREGMKSTEHYNSMVSVYSRNGFIDK 399
             P  R    L AI AFG++ ++  AE ++++        S+  Y+ ++ VY  +  + +
Sbjct: 395 ENP--RYNEVLAAILAFGKIDKVKDAEAVFEKVLKMSHRVSSNVYSVLLRVYVDHKMVSE 454

Query: 400 VSGLFKEMNMNGSKPNAITYRHLALGCLKAGLIKEALRTIEMGLKQITSSKVKKSTPWLE 459
              L K+M+ +G    A+T+  +    ++AG +++A  ++    K I S ++K   P + 
Sbjct: 455 GKDLVKQMSDSGCNIGALTWDAVIKLYVEAGEVEKAESSLS---KAIQSKQIK---PLMS 514

Query: 460 TTLSILEMFADNGDVEIAENLFEELKQANYTRYAFVYNSLIKAYVRAKFYNPNLLRRMIL 519
           + + ++  +   GDV   E +F+ +KQA Y    + Y +LI+AYV AK     +  RM  
Sbjct: 515 SFMYLMHEYVRRGDVHNTEKIFQRMKQAGYQSRFWAYQTLIQAYVNAKAPAYGMKERMKA 574

Query: 520 GGARPDAETYSLIKLVEQFR 528
               P+    + +   + F+
Sbjct: 575 DNIFPNKRLAAQLAKADPFK 585
[Close]
BLAST of Spo19002.1 vs. TAIR (Arabidopsis)
Match: AT3G15590.1 (Tetratricopeptide repeat (TPR)-like superfamily protein)

HSP 1 Score: 152.5 bits (384), Expect = 7.100e-37
Identity = 118/484 (24.38%), Postives = 224/484 (46.28%), Query Frame = 1 

		  

Query: 45  ELGLKNSSSNGEEALKMLSLRI-ERLPRGESIGYVFQRWMGEGFPVHRGDIFHSINRLRK 104
           E+  K+S   G+   K     + E +   +S+ +V ++W+ EG  + + ++  +I+ LRK
Sbjct: 126 EIEEKHSKDGGKPTKKRGQSELYESIVAYKSVKHVLEKWVKEGKDLSQAEVTLAIHNLRK 185

Query: 105 LKLDRRALEVMEWVIREKPYRPKELDYSYLLEFTIKLHGISHGERLFTNVPIEFQNDLLY 164
            K     L++ EW+     +   E +Y+  L+   K+H +   E    ++P   + +++Y
Sbjct: 186 RKSYAMCLQLWEWLGANTQFEFTEANYASQLDLVAKVHSLQKAEIFLKDIPESSRGEVVY 245

Query: 165 NNLVIACLDKGVVRLSLEYMKKMRELGHPISHLVFNRLIILHSSPRRRNMIPKILAQMRA 224
             L+  C+ K  V  + +   KM+EL  P S    N+L++L+S   R+  I  +L  M  
Sbjct: 246 RTLLANCVLKHHVNKAEDIFNKMKELKFPTSVFACNQLLLLYSMHDRKK-ISDVLLLMER 305

Query: 225 DKVARHVSTFNILLKIEANDHNIEGLMKVFGDMKRANIEPNEVTYCILATAHAVAKLYCG 284
           + +    +T++ L+  +    +I G+ K+   +K   IE +     ILA  +  A L   
Sbjct: 306 ENIKPSRATYHFLINSKGLAGDITGMEKIVETIKEEGIELDPELQSILAKYYIRAGLKER 365

Query: 285 CETYVEAIEKSKTGNNWSTFDVLIILYGYLGKAKEVDRIWSIVQGFPHVRSKSYLLAIEA 344
            +  ++ IE             L+ LY  +G +  V R+   V   P  R  + + AI+A
Sbjct: 366 AQDLMKEIEGKGLQQTPWVCRSLLPLYADIGDSDNVRRLSRFVDQNP--RYDNCISAIKA 425

Query: 345 FGRMGQLNRAEQLWDECKPREGMKSTEHYNSMVSVYSRNGFIDKVSGLFKEMNMNGSKPN 404
           +G++ ++  AE +++    +  +     Y +++ +Y+ N  + K   L K M   G    
Sbjct: 426 WGKLKEVEEAEAVFERLVEKYKIFPMMPYFALMEIYTENKMLAKGRDLVKRMGNAGIAIG 485

Query: 405 AITYRHLALGCLKAGLIKEALRTIEMGLKQITSSKVKKSTPWLETTLSILEMFADNGDVE 464
             T+  L    +KAG + +A    E+ L + T  K  K  P   T ++ILE +A  GDV 
Sbjct: 486 PSTWHALVKLYIKAGEVGKA----ELILNRAT--KDNKMRPMFTTYMAILEEYAKRGDVH 545

Query: 465 IAENLFEELKQANYTRYAFVYNSLIKAYVRAKFYNPNLLRRMILGGARPDAETYSLIKLV 524
             E +F ++K+A+Y      Y +++ AY+ AK     ++ RM      P+    + +  V
Sbjct: 546 NTEKVFMKMKRASYAAQLMQYETVLLAYINAKTPAYGMIERMKADNVFPNKSLAAKLAQV 600

Query: 525 EQFR 528
             F+
Sbjct: 606 NPFK 600
[Close]
BLAST of Spo19002.1 vs. TAIR (Arabidopsis)
Match: AT1G60770.1 (Tetratricopeptide repeat (TPR)-like superfamily protein)

HSP 1 Score: 149.8 bits (377), Expect = 4.600e-36
Identity = 114/439 (25.97%), Postives = 203/439 (46.24%), Query Frame = 1 

		  

Query: 89  VHRGDIFHSINRLRKLKLDRRALEVMEWVIREKPYRPKELDYSYLLEFTIKLHGISHGER 148
           V + ++  +I +LR   L   AL++ E V+ E+       D +  L+   K   I+ GE 
Sbjct: 53  VFKWEVGDTIKKLRNRGLYYPALKLSE-VMEERGMNKTVSDQAIHLDLVAKAREITAGEN 112

Query: 149 LFTNVPIEFQNDLLYNNLVIACLDKGVVRLSLEYMKKMRELGHPISHLVFNRLIILHSSP 208
            F ++P   + +L Y +L+     + +   +   + KM+EL    S + +N L+ L++  
Sbjct: 113 YFVDLPETSKTELTYGSLLNCYCKELLTEKAEGLLNKMKELNITPSSMSYNSLMTLYTKT 172

Query: 209 RRRNMIPKILAQMRADKVARHVSTFNILLKIEANDHNIEGLMKVFGDMKR-ANIEPNEVT 268
                +P ++ +++A+ V     T+N+ ++  A  ++I G+ +V  +M R   + P+  T
Sbjct: 173 GETEKVPAMIQELKAENVMPDSYTYNVWMRALAATNDISGVERVIEEMNRDGRVAPDWTT 232

Query: 269 YCILATAHAVAKLYCGCETYVEAIEKSKTGNNWSTFDVLIILYGYLGKAKEVDRIW-SIV 328
           Y  +A+ +  A L    E  ++ +E   T  +++ +  LI LYG LGK  EV RIW S+ 
Sbjct: 233 YSNMASIYVDAGLSQKAEKALQELEMKNTQRDFTAYQFLITLYGRLGKLTEVYRIWRSLR 292

Query: 329 QGFPHVRSKSYLLAIEAFGRMGQLNRAEQLWDECKPREGMKSTEHYNSMVSVYSRNGFID 388
              P   + +YL  I+   ++  L  AE L+ E +           N ++  Y++ G I 
Sbjct: 293 LAIPKTSNVAYLNMIQVLVKLNDLPGAETLFKEWQANCSTYDIRIVNVLIGAYAQEGLIQ 352

Query: 389 KVSGLFKEMNMNGSKPNAITYRHLALGCLKAGLIKEALRTIEMGLKQITSSKVKKSTPWL 448
           K + L ++    G K NA T+       +K+G +  AL  +   +  I      K  P  
Sbjct: 353 KANELKEKAPRRGGKLNAKTWEIFMDYYVKSGDMARALECMSKAV-SIGKGDGGKWLPSP 412

Query: 449 ETTLSILEMFADNGDVEIAENLFEELKQANYTRYAFVYNSLIKAYVRAKFYNPNLLRRMI 508
           ET  +++  F    DV  AENL E LK       A ++  LI+ Y  A   +P + RR+ 
Sbjct: 413 ETVRALMSYFEQKKDVNGAENLLEILKNGTDNIGAEIFEPLIRTYAAAGKSHPAMRRRLK 472

Query: 509 LGGARPDAETYSLIKLVEQ 526
           +     +  T  L+  V Q
Sbjct: 473 MENVEVNEATKKLLDEVSQ 489
The following BLAST results are available for this feature:
BLAST of Spo19002.1 vs. NCBI nr
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. NCBI nr)
Total hits: 5
Match NameE-valueIdentityDescription
gi|902164364|gb|KNA06965.1|3.5e-304100.hypothetical protein SOVF_1762... [more]
gi|731348973|ref|XP_010685762.1|3.6e-25682.5PREDICTED: pentatricopeptide r... [more]
gi|870853365|gb|KMT05246.1|1.3e-24284.8hypothetical protein BVRB_7g17... [more]
gi|731392204|ref|XP_002281058.2|2.6e-21471.9PREDICTED: pentatricopeptide r... [more]
gi|255584236|ref|XP_002532856.1|1.9e-20969.3PREDICTED: pentatricopeptide r... [more]
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BLAST of Spo19002.1 vs. UniProtKB/TrEMBL
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. UniprotKB/TrEMBL)
Total hits: 5
Match NameE-valueIdentityDescription
A0A0K9QI92_SPIOL2.5e-304100.Uncharacterized protein OS=Spi... [more]
A0A0J8EQF7_BETVU9.2e-24384.8Uncharacterized protein OS=Bet... [more]
F6GV12_VITVI1.8e-21471.9Putative uncharacterized prote... [more]
B9T3N7_RICCO1.3e-20969.3Pentatricopeptide repeat-conta... [more]
A0A068ULD6_COFCA1.6e-20766.6Uncharacterized protein OS=Cof... [more]
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BLAST of Spo19002.1 vs. ExPASy Swiss-Prot
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. ExPASy SwissProt)
Total hits: 5
Match NameE-valueIdentityDescription
PPR19_ARATH2.4e-18863.9Pentatricopeptide repeat-conta... [more]
PP135_ARATH2.7e-4626.6Pentatricopeptide repeat-conta... [more]
PPR44_ARATH2.8e-4325.0Pentatricopeptide repeat-conta... [more]
PP234_ARATH1.3e-3524.3Pentatricopeptide repeat-conta... [more]
PPR86_ARATH8.2e-3525.9Pentatricopeptide repeat-conta... [more]
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BLAST of Spo19002.1 vs. TAIR (Arabidopsis)
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. TAIR)
Total hits: 5
Match NameE-valueIdentityDescription
AT1G07590.11.4e-18963.9Tetratricopeptide repeat (TPR)... [more]
AT1G80270.11.5e-4726.6PENTATRICOPEPTIDE REPEAT 596[more]
AT1G15480.11.6e-4425.0Tetratricopeptide repeat (TPR)... [more]
AT3G15590.17.1e-3724.3Tetratricopeptide repeat (TPR)... [more]
AT1G60770.14.6e-3625.9Tetratricopeptide repeat (TPR)... [more]
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InterPro
Analysis Name: InterPro Annotations of S. oleracea
Date Performed: 2018-06-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR002885Pentatricopeptide repeatPFAMPF01535PPRcoord: 451..475
score: 0.6coord: 371..399
score: 1.3E-6coord: 483..496
score:
IPR002885Pentatricopeptide repeatPFAMPF13041PPR_2coord: 230..274
score: 1.
IPR002885Pentatricopeptide repeatTIGRFAMsTIGR00756TIGR00756coord: 372..404
score: 4.
IPR002885Pentatricopeptide repeatPROFILEPS51375PPRcoord: 229..263
score: 8.418coord: 333..363
score: 6.697coord: 159..193
score: 7.728coord: 368..402
score: 10.972coord: 445..479
score: 6.741coord: 403..433
score:
IPR011990Tetratricopeptide-like helical domainGENE3D1.25.40.10coord: 336..492
score: 9.0E-4coord: 161..211
score: 9.
NoneNo IPR availablePANTHERPTHR24015FAMILY NOT NAMEDcoord: 306..528
score: 2.1E-256coord: 65..270
score: 2.1E
NoneNo IPR availablePANTHERPTHR24015:SF588SUBFAMILY NOT NAMEDcoord: 306..528
score: 2.1E-256coord: 65..270
score: 2.1E

GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0044238 primary metabolic process
biological_process GO:0006536 glutamate metabolic process
biological_process GO:0051252 regulation of RNA metabolic process
biological_process GO:0006396 RNA processing
biological_process GO:0009451 RNA modification
biological_process GO:0042254 ribosome biogenesis
biological_process GO:0006397 mRNA processing
biological_process GO:0009553 embryo sac development
biological_process GO:0001510 RNA methylation
biological_process GO:0006177 GMP biosynthetic process
biological_process GO:0006541 glutamine metabolic process
biological_process GO:0006531 aspartate metabolic process
biological_process GO:0006839 mitochondrial transport
biological_process GO:0006529 asparagine biosynthetic process
biological_process GO:0006351 transcription, DNA-templated
biological_process GO:0006206 pyrimidine nucleobase metabolic process
biological_process GO:0006144 purine nucleobase metabolic process
biological_process GO:0002943 tRNA dihydrouridine synthesis
biological_process GO:0055114 oxidation-reduction process
biological_process GO:0006260 DNA replication
biological_process GO:0044237 cellular metabolic process
biological_process GO:0006364 rRNA processing
biological_process GO:0006007 glucose catabolic process
biological_process GO:0009853 photorespiration
biological_process GO:0000398 mRNA splicing, via spliceosome
biological_process GO:0042991 obsolete transcription factor import into nucleus
biological_process GO:0071702 organic substance transport
biological_process GO:0006913 nucleocytoplasmic transport
biological_process GO:0033036 macromolecule localization
biological_process GO:0010467 gene expression
biological_process GO:0044260 cellular macromolecule metabolic process
biological_process GO:0034969 histone arginine methylation
biological_process GO:0043419 urea catabolic process
biological_process GO:0008033 tRNA processing
biological_process GO:0090503 RNA phosphodiester bond hydrolysis, exonucleolytic
biological_process GO:0006402 mRNA catabolic process
biological_process GO:1902600 proton transmembrane transport
biological_process GO:0000963 mitochondrial RNA processing
biological_process GO:0000957 mitochondrial RNA catabolic process
biological_process GO:0010468 regulation of gene expression
biological_process GO:0009408 response to heat
biological_process GO:0006457 protein folding
biological_process GO:0006446 regulation of translational initiation
biological_process GO:0009744 response to sucrose
biological_process GO:0006950 response to stress
biological_process GO:0009749 response to glucose
biological_process GO:0009750 response to fructose
biological_process GO:0009220 pyrimidine ribonucleotide biosynthetic process
biological_process GO:0006522 alanine metabolic process
biological_process GO:0008152 metabolic process
biological_process GO:0006265 DNA topological change
biological_process GO:0042967 obsolete acyl-carrier-protein biosynthetic process
biological_process GO:0070125 mitochondrial translational elongation
biological_process GO:0006448 regulation of translational elongation
biological_process GO:0010498 proteasomal protein catabolic process
biological_process GO:0006886 intracellular protein transport
biological_process GO:0006094 gluconeogenesis
biological_process GO:0007010 cytoskeleton organization
biological_process GO:0005975 carbohydrate metabolic process
biological_process GO:0051301 cell division
biological_process GO:0019915 lipid storage
biological_process GO:0009933 meristem structural organization
biological_process GO:0009640 photomorphogenesis
biological_process GO:0006626 protein targeting to mitochondrion
biological_process GO:0048825 cotyledon development
biological_process GO:0010162 seed dormancy process
biological_process GO:0050826 response to freezing
biological_process GO:0010564 regulation of cell cycle process
biological_process GO:0009909 regulation of flower development
biological_process GO:0009560 embryo sac egg cell differentiation
biological_process GO:0009845 seed germination
biological_process GO:0010228 vegetative to reproductive phase transition of meristem
biological_process GO:0006606 protein import into nucleus
biological_process GO:0009165 nucleotide biosynthetic process
biological_process GO:0016567 protein ubiquitination
biological_process GO:0010182 sugar mediated signaling pathway
cellular_component GO:0005829 cytosol
cellular_component GO:0005730 nucleolus
cellular_component GO:0005777 peroxisome
cellular_component GO:0005840 ribosome
cellular_component GO:0009535 chloroplast thylakoid membrane
cellular_component GO:0005634 nucleus
cellular_component GO:0080008 Cul4-RING E3 ubiquitin ligase complex
cellular_component GO:0032040 small-subunit processome
cellular_component GO:0005886 plasma membrane
cellular_component GO:0005794 Golgi apparatus
cellular_component GO:0016021 integral component of membrane
cellular_component GO:0005743 mitochondrial inner membrane
cellular_component GO:0009506 plasmodesma
cellular_component GO:0005774 vacuolar membrane
cellular_component GO:0005694 chromosome
cellular_component GO:0005737 cytoplasm
cellular_component GO:0009507 chloroplast
cellular_component GO:0005739 mitochondrion
molecular_function GO:0051082 unfolded protein binding
molecular_function GO:0008568 microtubule-severing ATPase activity
molecular_function GO:0016151 nickel cation binding
molecular_function GO:0008026 ATP-dependent helicase activity
molecular_function GO:0003917 DNA topoisomerase type I activity
molecular_function GO:0003677 DNA binding
molecular_function GO:0000175 3'-5'-exoribonuclease activity
molecular_function GO:0020037 heme binding
molecular_function GO:0004654 polyribonucleotide nucleotidyltransferase activity
molecular_function GO:0008469 histone-arginine N-methyltransferase activity
molecular_function GO:0005488 binding
molecular_function GO:0031072 heat shock protein binding
molecular_function GO:0008080 N-acetyltransferase activity
molecular_function GO:0005506 iron ion binding
molecular_function GO:0004553 hydrolase activity, hydrolyzing O-glycosyl compounds
molecular_function GO:0003697 single-stranded DNA binding
molecular_function GO:0050660 flavin adenine dinucleotide binding
molecular_function GO:0046872 metal ion binding
molecular_function GO:0017150 tRNA dihydrouridine synthase activity
molecular_function GO:0003899 DNA-directed 5'-3' RNA polymerase activity
molecular_function GO:0005515 protein binding
molecular_function GO:0004066 asparagine synthase (glutamine-hydrolyzing) activity
molecular_function GO:0003922 GMP synthase (glutamine-hydrolyzing) activity
molecular_function GO:0016462 pyrophosphatase activity
molecular_function GO:0016740 transferase activity
molecular_function GO:0016787 hydrolase activity
molecular_function GO:0003723 RNA binding
molecular_function GO:0003918 DNA topoisomerase type II (ATP-hydrolyzing) activity
molecular_function GO:0003746 translation elongation factor activity
molecular_function GO:0005525 GTP binding
molecular_function GO:0008173 RNA methyltransferase activity
molecular_function GO:0003924 GTPase activity
molecular_function GO:0030246 carbohydrate binding
molecular_function GO:0004540 ribonuclease activity
molecular_function GO:0004386 helicase activity
molecular_function GO:0005524 ATP binding
molecular_function GO:0016491 oxidoreductase activity
molecular_function GO:0017077 oxidative phosphorylation uncoupler activity
molecular_function GO:0008536 Ran GTPase binding
molecular_function GO:0003743 translation initiation factor activity
molecular_function GO:0003676 nucleic acid binding
RNA-Seq Expression
   



Co-expression
Gener valueExpression
Spo170810.71Barchart | Table
Spo184790.71Barchart | Table
Spo251230.71Barchart | Table
Spo264520.70Barchart | Table
Spo044900.70Barchart | Table
Spo216460.70Barchart | Table
Spo197760.70Barchart | Table
Spo117560.69Barchart | Table
Spo051900.69Barchart | Table
Spo236400.69Barchart | Table
Spo188600.69Barchart | Table
Spo039140.69Barchart | Table
Spo064930.68Barchart | Table
Spo107020.68Barchart | Table
Spo023740.68Barchart | Table
Spo148230.68Barchart | Table
Spo143100.68Barchart | Table
Spo132410.68Barchart | Table
Spo087650.68Barchart | Table
Spo209410.67Barchart | Table
Spo057320.67Barchart | Table
Spo061680.67Barchart | Table
Spo105840.67Barchart | Table
Spo110930.67Barchart | Table
Spo118700.67Barchart | Table
Spo133870.67Barchart | Table
Spo152350.67Barchart | Table
Spo156890.67Barchart | Table
Spo158150.67Barchart | Table
Spo002630.67Barchart | Table
Spo235130.67Barchart | Table
Spo247860.67Barchart | Table
Spo254760.67Barchart | Table
Spo271440.67Barchart | Table
Spo219590.66Barchart | Table
Spo225250.66Barchart | Table
Spo021810.66Barchart | Table
Spo003420.66Barchart | Table
Spo061370.66Barchart | Table
Spo005040.66Barchart | Table
Spo270760.66Barchart | Table
Spo143230.66Barchart | Table
Spo043500.66Barchart | Table
Spo043230.66Barchart | Table
Spo167100.66Barchart | Table
Spo156050.66Barchart | Table
Spo148840.65Barchart | Table
Spo239780.65Barchart | Table
Spo011710.65Barchart | Table
Spo168740.65Barchart | Table
Spo183930.65Barchart | Table
Spo032140.65Barchart | Table
Spo024720.65Barchart | Table
Spo196400.65Barchart | Table
Spo199810.65Barchart | Table
Spo211520.65Barchart | Table
Spo266320.65Barchart | Table
Spo090280.65Barchart | Table
Spo010010.65Barchart | Table
Spo057260.65Barchart | Table