Spo14511 (gene) | SpinachBase

Overview


Name	Spo14511
Type	gene
Organism	Spinacia oleracea (Spinach)
Description	Unknown protein
Location	Super_scaffold_149 : 1167736 .. 1173750 (+)

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGCGACGGTATCTCCAAGCCGTTGCATTAGAGGTTCAAATGCAACGTGTATCAGACATGTAACGGCGAGCCAATTAATATTTTCCCGCCTACTGTATACTTTATTTGCTCCCATTAGTTTTTCAAAATTTTCAAAACCGCGCACTTAAAATTTACCTTAAAGAAAATATTAAAAAAAATAGAAATAAAAAAATACACGCAAAAACACTTTATGTGGAACATGTCCAATTATCCAGGAGAGACTGAGAGAAAATACGTAGTTAGGGTTCATCAAACTTTTGGGGAAAGTCTAACGATTTGGTCTCCAATTCGCAATTAGGCACGAGCTTATTTCGAATTTCTTTCAACTGACTGCGAAATTCTCTGCGTAGTTCGAACGCAAAGTTCTCTGCGAAATTCAAACACGAAATTAGTCTATTCTTCGAGTGGAAGGGTTGAATTGGGGCTTTCCATTAATAATTCGAACAAGTTAGAGGAGAAATTCTACTTCAACCATCTGCTACTATTCACGATATGTAATCGATTCACAATTCAGGTTTATGTATTAATAGTGTGAATTTTGGATAGTTTTGTGAGGGTTTGTTCCATTGCTTCTCCGTTTTTCCCTTGTATTGCATTCTCCGTTTTCCCTTTTCTGGTAAGCATAATTCAGGGTTGTTCTGTTTTCTCTCATCTGCTACTGTTTGATATTTGTTCTGCCCCCCTTTTCTGGTAAGAATAATTACAGGTTTTTTTAATATATTCATAGTTGATTATTGGAAGATATTCTGTAAATTTGTAATATTTGATTTAGTTAACCTTTCTATTACTAATGGATTTATATGATTTAGATTGCAGCCATTGTGAGACCCAACCGCCTTCTCAGAGGAACGGGGGTAGAAAGGTCTTGCCTTCTGCTGCTGCACAACATACCCTTGATAGGGGCTTCTCTTCTAATCTCATTCTTGCACCCCAAGCATGCCAGTGAGGTGATTATACCCGCTTCGCCATTTCCACTCATATTCTAAAGTGAAAGACTGTGTTGTTATCTTTGTGTTGTATGCTTATGATGATTGAGAACATGAATGCAGTCACCAGGGAGCTATAATTGTGTCCTCTGGATGAAGTTTGAGCCTGAAAAATCTAAGAAATGTGATGTCCCATGTACTGCTAACTGCCTTATTCTTCATAACATACAACCAAATGTTGCGCATTAAATGCATTTGTCAGGGCACGAGTATTTCCATGCATCATTTATCTTGTTCTTTGCTCTTATTATGTCATTATTGGACTGTAAATTGGTATATGTAGAGTTTTTAGAAGCTTTAATCTCACCAAGTATTAGTTATTGAATTTACAGTTTCAAAAAAAAAACAGTAGCTTCTCTTATTGCTCAGCGGGAACTGGTAAGGTACTAGTTTGCATGTATTTAGAACTCCAAAGACCTTCCATGCATCATTTATCTTGTTCTTTGCTCTTATTATGTCATTATTGGACTGCAAATTACTGGAACTCAAGTCCCTCCTAGAGAATTGTCTGATGGTATTGAAATTACTGGAACTTTCTATCATATTTTGACTTATTTTGTATTTGTTAATTCCTTTCTTCAGAAGGTTAAGGCGTTGGGAACATCAGAGGAGTCTAACAGAGGAAAGATTGAAACTACTAGCAACACGGATATTGAAAATTTGACCTGTCGTAAAAAAAAGGTAACAAATTGAAACTACTCTTATTTTGCTGAGTCTTAGATCTGCAGTCTATTTTCTCCTTCTTAGTAAGTGGTTTTGAAAAAAAAAGTGCAAAGATGCTCAATTTCAAGCAATTTTCCAGAAAATAAGTATTAACTGATTATAGCTCAGAAGAAAATGTTTCAATTCTTCAGAAGGTTAAGGCGTTGGGAACATCAGAGGAGTCTAACAGAGGAAAGATTGAACTACCTGATCATAATCAATATAACAGTGCTTTCATCCAATCTGTATGACATTGTCTCAAAAAGTATAGACACAGCAGATATCTTCTAGGTGTCTGTCTGCAACATAATGATCGAAGTTATTAGCCACTCACAAAAAAATTAGGGGTTAGTTAAATAGCCTAAACCGAGCACGTTTCTCTCTAGCAAGTTACTGCTTGATGAGAGTATCCAAAAGTTGATACCGTGCATATGATTTGTCCCAGATTTGTTTGCAATGAATGTTTTGATCTATCTATCTAACTGCATCAGCAAAGAGGAGTGGTATTTGTGATCCTTGTATCTTTCTAAAGTCGTCAATACTGCTGATCTCTATGTCTGGTTTCCTTTTTTTTTCCTTGAGACTTGAGCAATATCTATTTATGTGCCTGGTGTCTACAAGAGTGTGTACCAAGCTGTGAAAGTCAATTGTTGTATTTCTTAGAGTTACTGAGTTAGTGTTGTCATGAGTTAGAATAGTTTTTAGGGACTCGGGTACTATGTTGATATATTGGTATTTTTGGTTGTGACCACACTAATGTCCAGGGGCATGAATGTTTTCTACGCTTGTCATCTGAATTCACTACATCGCTGTTTGATGTTACTGATAGGAATTTCAACTACGAGAAGGGAGTTGGTTGACTGATTAAAAATGCTGAAAGCTGATTGCTGATAAAAAAAATCTGTTGACTGATAAAAAAAATATGAAAGCTGTTGTTGTTAGGTGTTTCTATCATCATTATCATTACTATTAATGATGAAACATAGCCATCATAATCCAACTTTATAGCTTTATACTCCCAGACTTTACTTTAGCAAAAGAGATTAATTGTTCAACCTATCATTCAAAATAAAATATAAAGTAATTACCATAAACATTTGAATTCCAACTATATCTGATCAAACCTCTGTAGTGAATTGTTTAGAAGCCTCCACAGTTCAGACAACAATTGAACAGCCACTTCCATACCATCTTTTAAGCAACCATAGTAAACTACTCCGAATCCGCCTTTTCCCAGCTCTCCTTGGAAGCTTCCATGCCATGCTTGTTATACAAAAAATGATGAAAACTGCTACAATTAGAACCAGTACAGCTGAAAATGCAGCTATGTGAGCAACGAGTATTTTGCTTTTCTTGTTCTTCGAAGTACAGGAGTTGCTCGAACATAGATCTGAATTATTTTGCATGCTTTACTCGGAAACATAAGAAAGTCAGACAAAATGTTTTAGAGAAGGTGAATTGTCAAAGACAGAAAACTATAGGATCTTGAATATTTGTTGATACAAGTACCTTAAAGAGAGTGGTCCTGCAGCAGATTTTTCTAACAGAAGTTTAGGAACTGAACCAGTGAAGTTGTTTACTGAAAGGTTTCTGCAAACATTTAACATTGTTGTGTTAATACTTGACAGACCTTTAACATTTACAGTACCACGGTCTGGATTTAGTTGTCACTTTGCTAGCTAATTACGCCATCACATGCAGTAACAATTAATTCCAGATGAAAAGGGAACAAAACAAAGGAATGAATGAAAACATTACAAGATTTGTACTGCTGTAAGATTTGCAAATGAAGCCGCAATATGTCCAGTAAGCCCCTTCGAACTAAGATTTCTGATCACAAAAAAGTGAAACAGAACAGATTAACTTGAGAATTGTTTAAGAGATAATAAAAATAGGATGTAAAAGCTTATATTAATATTATTCTGGTTGAGTTGGAACTGTCATAGTTGCAGTCCACGCCAGACCCTCTCGCTAGAGGATATGTTGCTACAAGCAAAGTCGAACTCTTTGACTTTCTCTATCTTCACTGTCTATGATCCCTCTCGCCGAGTTTCGTTCTCCTGGGTATCTACAAATGAGGTTATGTCTGTGTTCATACATACAGTACTTTCACATTGAGTTTTTTTGCAAATTTTATGGTGAAGCAAAGTTTAATCTGTAAATGTTATCTGGGGCATGGCCTGATTCCTTAAGAATTGTTGAAACATAAGCAATGCAAGTCGAGGGAAAATCAACTGAACCTCATGCCCTGCATCCCTGATACAGATACAAATTCCTCAAAAGTTTTTGAAACATAAGAATTCTTCTTCTGGTACTTATCCTTGCTACTCGTATCTTCAGATACAGATGCAACAGCAATCAGGGCAGTCTTAGCAGTGGCTATTGCTTTCGCAGCAATAGCAGCTTTTTCCTCAGCAGCAGCTCGTGTAGCTTCAGCTGCCTTAGCTAATATGTACAACATACAGGTGTTGGTTGTCTCAGCTTGTTAGCTGATTTGTTTTTTGTTCTTGAGATTTCAGTATTTTTGCTTTGTATTAACTGCTTATTCCTTTTGGTAATAATAATTTATTTGCCAAAATAAACTTGAGATGGATGTTTACTGATGTATACCTGATCTTTATATTACAGGTTATAGCTCAGTCCTCGACTATGGGTGATTTTGTGAAGAATAATAATCAGCAACTTGCACCCCATGTTGTATCTATGATTGTATCTCAACTTCAAGAAGCTAGACCATCAATTCCAAAGGATGCATCTAGTACGCTGCATGTCAGTGAGCGAAATGGACAGTCTGGTGGGACAAGCAGGACAATTAACCAGGTAAAATATTTGTTTTGGCATTATAATATGTTGCGTTGTCTTATTATTTTATTGAAATTCTGTTGTGGTGTTTGGTTGTATAGTTGGACAGGTTCGTTTAGTTATCGGTAGTTTGGCAGAACCTTTAGTAGTTGTTGGATTTGGGTGTTACTAAATGAAGAATTGAACATAAATGTCGATATATCTTCTTTCACATTCTTTAAGGGATAGCTGCGTAATAAGGACCAAACCACATTATGTTTGCAAATGTTTTCATTGTCATTTGTAATGTGAGAACCTAATCTCTTCATTTTCCTAGTCAGAATTTGTTTAATGGGTAGACCTTTGTTAAAGTGGTGGTCTAAGCTGTGAATGAGTATCTCACTTGAATCCAAAGAATGAGATCTAGGCCCACATCACCCACTCAGTAACTAATAAAGAAAACTGGCATACACCCTTTGGCACCAACTGCAAGAAAAGCCTTAGAAAGAGATAGTTCAGTGATGTTTATGATAGTTCCCTTATTTCTGAACTAATAAACAAAACTAGCATGAATTGGCAGTGAATGAAGGAGCCTTTTTCTGAAGAAACAGATGCAATTCCCTTATATTAGAGGGTGTCATCTGAATTTTCTGTGGACCTATTTCCTTTCACTTTCTTAAATGAGCCATATCACAATTGATTACGTTTAGATTTTTTTTGAAGTTGGCAATTCTTGTTGATAACATTTCTTCCTTCTTGTGCCCTTCTTATTAATAGATCATACTCATGTGAACTGGCGTTTTATTGATATGCATGTTCCCTTAGCCTTTTTCCATCTTTTTGAAGAACGAGGGGAAATTGATGAATATCATTTATAGGTATTGAGTCCTGTTCCGAGACTGCTACATCCTACATGATTAAGAACCTTGAATACTAAGCAAGTACCATATGTTAGGGTCTGGAATCAGTCATCAGATATTGAGAGGCACAGATTCATCGTCTCATAGAATTGTTTGCTGGGCATATATTGTCTACATTTCTGCCCTACTTATTGGGTTTTGCACATGCTTGTCTAATACCCTCAGGATCTGAACAGCAGCCTCAAGGTGTGAATCATCACATAAATGCAACGCCCCTCGCTGTATTATTGTTCATGCTCAGCTTGGTTCAAACTTTAAATACAATTTCTACTTCCTCCGTCCCAAAACAATAAGTTGTATTTGATTGGAGTCATTTTAAGGATTTGAGATTTATTTAATTAAAAATAGTCGTATCTAGGTATTGCTTACTTTTTTGTGAAATTTCATGCTTTATTTGAATAAACATGAAGTTTATTAAATTATTTAAATTATCGTGTTTTAGCTAGTGCACCATCTCTAACTTGTGCCCATTCGTGATTTAAACTTGCATGAGCATGGTGAGCTAAATGGAGAAGAAATGTATATCTAGCAATGACACGGTGGAGGCTCTTGTTTGTTTTTGAGTCATTTTGTGATTTCTAGTAATGTTGAATTTGTTTACGTGG

mRNA sequence

ATGCGACGTTTTGTGAGGGTTTGTTCCATTGCTTCTCCGTTTTTCCCTTGTATTGCATTCTCCGTTTTCCCTTTTCTGATTGCAGCCATTGTGAGACCCAACCGCCTTCTCAGAGGAACGGGGGTAGAAAGGTCTTGCCTTCTGCTGCTGCACAACATACCCTTGATAGGGGCTTCTCTTCTAATCTCATTCTTGCACCCCAAGCATGCCAGTGAGAAGGTTAAGGCGTTGGGAACATCAGAGGAGTCTAACAGAGGAAAGATTGAAACTACTAGCAACACGGATATTGAAAATTTGACCTGTCGTAAAAAAAAGGTTATAGCTCAGTCCTCGACTATGGGTGATTTTGTGAAGAATAATAATCAGCAACTTGCACCCCATGTTGTATCTATGATTGTATCTCAACTTCAAGAAGCTAGACCATCAATTCCAAAGGATGCATCTAGTACGCTGCATGTCAGTGAGCGAAATGGACAGTCTGGTGGGACAAGCAGGACAATTAACCAGGATCTGAACAGCAGCCTCAAGGTGTGAATCATCACATAAATGCAACGCCCCTCGCTGTATTATTGTTCATGCTCAGCTTGGTTCAAACTTTAAATACAATTTCTACTTCCTCCGTCCCAAAACAATAAGTTGTATTTGATTGGAGTCATTTTAAGGATTTGAGATTTATTTAATTAAAAATAGTCGTATCTAGGTATTGCTTACTTTTTTGTGAAATTTCATGCTTTATTTGAATAAACATGAAGTTTATTAAATTATTTAAATTATCGTGTTTTAGCTAGTGCACCATCTCTAACTTGTGCCCATTCGTGATTTAAACTTGCATGAGCATGGTGAGCTAAATGGAGAAGAAATGTATATCTAGCAATGACACGGTGGAGGCTCTTGTTTGTTTTTGAGTCATTTTGTGATTTCTAGTAATGTTGAATTTGTTTACGTGG

Coding sequence (CDS)

ATGCGACGTTTTGTGAGGGTTTGTTCCATTGCTTCTCCGTTTTTCCCTTGTATTGCATTCTCCGTTTTCCCTTTTCTGATTGCAGCCATTGTGAGACCCAACCGCCTTCTCAGAGGAACGGGGGTAGAAAGGTCTTGCCTTCTGCTGCTGCACAACATACCCTTGATAGGGGCTTCTCTTCTAATCTCATTCTTGCACCCCAAGCATGCCAGTGAGAAGGTTAAGGCGTTGGGAACATCAGAGGAGTCTAACAGAGGAAAGATTGAAACTACTAGCAACACGGATATTGAAAATTTGACCTGTCGTAAAAAAAAGGTTATAGCTCAGTCCTCGACTATGGGTGATTTTGTGAAGAATAATAATCAGCAACTTGCACCCCATGTTGTATCTATGATTGTATCTCAACTTCAAGAAGCTAGACCATCAATTCCAAAGGATGCATCTAGTACGCTGCATGTCAGTGAGCGAAATGGACAGTCTGGTGGGACAAGCAGGACAATTAACCAGGATCTGAACAGCAGCCTCAAGGTGTGA

Protein sequence

MRRFVRVCSIASPFFPCIAFSVFPFLIAAIVRPNRLLRGTGVERSCLLLLHNIPLIGASLLISFLHPKHASEKVKALGTSEESNRGKIETTSNTDIENLTCRKKKVIAQSSTMGDFVKNNNQQLAPHVVSMIVSQLQEARPSIPKDASSTLHVSERNGQSGGTSRTINQDLNSSLKV

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Spo14511.1	Spo14511.1	mRNA

Homology

[Close]

BLAST of Spo14511.1 vs. NCBI nr
Match: gi|902231959|gb|KNA22475.1| (hypothetical protein SOVF_033740 [Spinacia oleracea])

HSP 1 Score: 123.2 bits (308), Expect = 4.400e-25
Identity = 64/65 (98.46%), Postives = 65/65 (100.00%), Query Frame = 1

		  
Query: 105 KVIAQSSTMGDFVKNNNQQLAPHVVSMIVSQLQEARPSIPKDASSTLHVSERNGQSGGTS 164
           +VIAQSSTMGDFVKNNNQQLAPHVVSMIVSQLQEARPSIPKDASSTLHVSERNGQSGGTS
Sbjct: 83  QVIAQSSTMGDFVKNNNQQLAPHVVSMIVSQLQEARPSIPKDASSTLHVSERNGQSGGTS 142

Query: 165 RTINQ 170
           RTINQ
Sbjct: 143 RTINQ 147

[Close]

BLAST of Spo14511.1 vs. NCBI nr
Match: gi|902180273|gb|KNA09516.1| (hypothetical protein SOVF_152930, partial [Spinacia oleracea])

HSP 1 Score: 67.8 bits (164), Expect = 2.200e-8
Identity = 40/59 (67.80%), Postives = 42/59 (71.19%), Query Frame = 1

		  
Query: 123 QLAPHVVSMIVSQLQEARPSI------------PKDASSTLHVSERNGQSGGTSRTINQ 170
           QLAPHVVSMIVSQLQEA P I            PKDA+S   VSE+NGQSGGTSRTINQ
Sbjct: 8   QLAPHVVSMIVSQLQEANPEINIVIPDFVTSSTPKDAASAPRVSEQNGQSGGTSRTINQ 66

[Close]

BLAST of Spo14511.1 vs. UniProtKB/TrEMBL
Match: A0A0K9RSF4_SPIOL (Uncharacterized protein OS=Spinacia oleracea GN=SOVF_033740 PE=4 SV=1)

HSP 1 Score: 123.2 bits (308), Expect = 3.100e-25
Identity = 64/65 (98.46%), Postives = 65/65 (100.00%), Query Frame = 1

		  
Query: 105 KVIAQSSTMGDFVKNNNQQLAPHVVSMIVSQLQEARPSIPKDASSTLHVSERNGQSGGTS 164
           +VIAQSSTMGDFVKNNNQQLAPHVVSMIVSQLQEARPSIPKDASSTLHVSERNGQSGGTS
Sbjct: 83  QVIAQSSTMGDFVKNNNQQLAPHVVSMIVSQLQEARPSIPKDASSTLHVSERNGQSGGTS 142

Query: 165 RTINQ 170
           RTINQ
Sbjct: 143 RTINQ 147

[Close]

BLAST of Spo14511.1 vs. UniProtKB/TrEMBL
Match: A0A0K9QSK1_SPIOL (Uncharacterized protein (Fragment) OS=Spinacia oleracea GN=SOVF_152930 PE=4 SV=1)

HSP 1 Score: 67.8 bits (164), Expect = 1.500e-8
Identity = 40/59 (67.80%), Postives = 42/59 (71.19%), Query Frame = 1

		  
Query: 123 QLAPHVVSMIVSQLQEARPSI------------PKDASSTLHVSERNGQSGGTSRTINQ 170
           QLAPHVVSMIVSQLQEA P I            PKDA+S   VSE+NGQSGGTSRTINQ
Sbjct: 8   QLAPHVVSMIVSQLQEANPEINIVIPDFVTSSTPKDAASAPRVSEQNGQSGGTSRTINQ 66

The following BLAST results are available for this feature:

BLAST of Spo14511.1 vs. NCBI nr
BLAST of Spo14511.1 vs. UniProtKB/TrEMBL
BLAST of Spo14511.1 vs. ExPASy Swiss-Prot
BLAST of Spo14511.1 vs. TAIR (Arabidopsis)

BLAST of Spo14511.1 vs. NCBI nr
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. NCBI nr)
Total hits: 2

Position :

Zoom :

x 1


Match Name	E-value	Identity	Description
gi\|902231959\|gb\|KNA22475.1\|	4.4e-25	98.4	hypothetical protein SOVF_0337...	[more]
gi\|902180273\|gb\|KNA09516.1\|	2.2e-8	67.8	hypothetical protein SOVF_1529...	[more]

BLAST of Spo14511.1 vs. UniProtKB/TrEMBL
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. UniprotKB/TrEMBL)
Total hits: 2

Position :

Zoom :

x 1


Match Name	E-value	Identity	Description
A0A0K9RSF4_SPIOL	3.1e-25	98.4	Uncharacterized protein OS=Spi...	[more]
A0A0K9QSK1_SPIOL	1.5e-8	67.8	Uncharacterized protein (Fragm...	[more]

BLAST of Spo14511.1 vs. ExPASy Swiss-Prot
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. ExPASy SwissProt)
Total hits: 0

Position :

Zoom :

x 1


Match Name	E-value	Identity	Description

BLAST of Spo14511.1 vs. TAIR (Arabidopsis)
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. TAIR)
Total hits: 0

Position :

Zoom :

x 1


Match Name	E-value	Identity	Description

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006189	'de novo' IMP biosynthetic process
biological_process	GO:0009113	purine nucleobase biosynthetic process
cellular_component	GO:0009570	chloroplast stroma
molecular_function	GO:0005524	ATP binding
molecular_function	GO:0046872	metal ion binding
molecular_function	GO:0004637	phosphoribosylamine-glycine ligase activity

RNA-Seq Expression

Co-expression


Gene	r value	Expression
Spo04873	0.67	Barchart \| Table
Spo17225	0.67	Barchart \| Table
Spo12543	0.66	Barchart \| Table
Spo17220	0.66	Barchart \| Table
Spo09214	0.65	Barchart \| Table