Spo16641 (gene) | SpinachBase

Overview


Name	Spo16641
Type	gene
Organism	Spinacia oleracea (Spinach)
Description	BnaC01g20550D protein
Location	Super_scaffold_164 : 20341 .. 26802 (+)

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

GACAATTATGCCCTTTTGCCTCAACCACAACAACAAAATAGAACGAGAGGAAGAGGGAGAAAGAGCGTGGGAAATCATAGCTTGAAAATGGCAGCCTCAGCTCTTCCAATCACTGGATGCATTATCCCCTCCACCCCGCGTCAATCCTTCTTCACGCAACGTCCTGCTTCTATTTTGCAGTAAGTTCACACTATTTTCACTTCTATTTCTTCCTTCATTATTATCATGTTTCTATGTTCTCAATTCTCCAAATTTATGCCAATTTTTCTGGGTAATTGCCTAATATAATGTTCGATATGATTCAGGGGGGGAATAATTCATACCCTTTTTGAACTTTTCCCGAATTCAAAATTAGATGGAAATTGGAATGATCTACTTAGTTTGAGAAGCCCCAATTCTGGATTACTGCAAATACTTGGAAGTCGTATTTTTTAAAGTTGTACCATGATTATCTGTTTTATCTTTTAGTAGTAAACCCTTACCCCATGATTTATTGTCAGGGATGAAGGAGAAAACTAAGAGTAATTGTGCTGTAAATTGAGTTAGCATCAATTGAGGTTAGTTTTGGAGTTGGGTTTGTTAGATAAAAGACTGTCACTCCATGAAAAACATTAGAAATTTTGAATAGAGCATTTGTATCGAGCTCGGTTTGCACATGCTTGATCACTTGGTTTATTGTTATTGTGCAAGTGAGGTTCGAATGTCTATCCAATTATCCGGATGCCACTCATACTATTTTTTGGGATTGGGAGAGTGATATTACATTTGGTTTCTTAATATAACAACCACCCGGCATAGAATGTGTTGACAGAGTTCTATCTATTCACCTGATTTTCACTTTTTCTGAATTGATCTTATCTGAACTTAATTAAACTTATCTGGACTTATTAGAACTTATCAAAACTTATTTTGGTTATAAATTGTATTTGGTCAACACTTATTTTTCGTGAACTTATCTTATCTAAACTTAACTGAACCATCATGACACAATAAGACACAATAAGAAACAGTAAGTTAGTATACCGATCAGGTAGTGGTTTACCCAAGAACATCTTGTCATGATGGTATTTTTATTTTCCTATTGGACCCTAAATCAAAATGGCTCTTAAAACCTCTTCGCTTCTTTTCCATGAAGTAGAAGATAGTCGTCCCGTTATTGCTTTTGGGTCAATTGGAAACAACCTATCTGCAATTGCAGGGGTAAGGTTGCGTACACCCGACCCCCCCTTACCCCGCTTCTTGCGGGAGCCTTTTTGAGGCAATGGGGTAATGATAATGATAATGATAATGATGATGACCCTAATTGAACGAATTTGATTTAGCACCAATGAATTTCCATCACGAAGCTGATTTGGCAGTATAGTAGCTTGCTAATGAAGCGAATTGTATAGGAATTCTGATAAATTTTTACTTCTATTTCACTAGTTTGGCAACTGCGCTCATCGTCCGTGACTGAGAATAAACCATTTGACATTACTTCATGAATTTGGAGCAAGGTTGCACACTTGCATTTATTTAGAATTTCTCTAAAATTATAGAGAATCGCAGAACTATCCCTTCTGAAACTAAAGTCCAAAATACCATTGACCTGGTTAGCTATAGACCTAGAGTGCAACTTTAGCAAGTGATAAGTATTGAGAAACATTCATTTAATAGTTGCAAGATCTTCTCTGTTGTGATAAACAAATGGCGAGGGGGGTAATGGCCATATATAATAAGGTGATGGTGATATGGAAAAGAACAGCAAGAAAGACATAGACATAGAAACTTCCAAGCTAACACAGCCTACTAAAACTTAATGAAGTTGTTTTCTAAGAGTCCAAGACCGGCATTTTTTACTGCATGCAGCATAGGTGTAGGCGTGTAACCACTAGATTCTCAGATCAGCTGTGTTTTAATTAGTAAATAAGGTACTAGTATTACCTTTCAAGTCCCACTCTCTAAACAACTTCGGGTCAACTCCTTTCTTGGCCACTTTTTCTTATCCTTTAGAAATTGGCAAATAGGTTTTGTCCTCAACCCTGTGTCATACTGGATTTAATATTCTTGTGATAGAAATTAGAAACACTGCTTAAAAAAGGAGCTATAATTGTGCAGCTATAACGGGATCTATTTCTTCCTTGTGCTTCATTAGCCGTATACTTAATGGTCTACCTCATTTTGACAGCTTCATTCAACATGAGTTTGGCACCACTACTTGCAAGATACCAATTATTTATAAGTTTATTAAGTCTTTAGAGTTTGGAGTTATCATATTCACCATGAAGAGTATGGCCTAGCTGTAGATGTAAGGCACTAAAGAGTAATAACTATCACGTAATAGATGTATTCACTCTTTTCTTTGCAACGATCTCACAAATTATCAACAATTGCAAAGATAATTCACACCTATTATAAGAAAGGTGGAGTCTTTGATTAATAAGACACAAAACAGAGCAAACGTTTGGTTACAAAATTAGCAGCTTGAGGCTACAACTCTCCTACAGTGACAATACAACTCTCCAAAGTACAATACAACTCACAAAATGCCTTTTCCTCCCTTTCTCCTCTCTACTTATTTGCCTACGGTAGATGCCAAGTACTCATTAATTTATGCCTTTGTCTTCTAACTCACTCAGGTCTGCTCTGTGCTAGGCTCTGGTTTCCGTGGCTGCTTGTCCCTCTTCTGTGTTCTGTAGTATAATTCTTTTTGAGGGATGGGGGTTCGTTGCTTGTTACCTTACCTATCCCAAAACATAAAGTCATTTGCTTTTGATATCCTTCGTGTTTGTGAAATATTGGTATAGTTAATGTTATGACTCCTAATTAGTGAATTATATTTTGATTCAGATGATTTTCTTTTACTGTTCTTGTGATGGTTGTCTTGAATTGTATATTCTATGGCTATTCTCTTTCAGATGGAATTTGATGGGAAAGCAGCATCCAAGACAAAATGCGCATAAGAGGGGTGCGTTTCAAATGCTAGCCACTCCTAATGTATGCATTAAGTATTTCACTTTATATCATAAGGTTTTAGTTAGTTTGCTTATGATCTGGATTTTATTAAGGTGTGTGATTTGTTGGATCAATTTTGACAGAATTTTGTTAGTTTCAGTTTGAGTTTCTTGTTTAATGCTAGGTTCATATAACATATAGTTTCACTGATTGTTTTCGAGGTTATTATGTAGCTTAGTAATTTTTAGGTTCTCAAGGACATGCACTTGACGTTTTTCTTGATTTGGTTAATAATTGTCACTCTTTCCATCCCTAAATAATACTTCAGCAGGTCTTATTTCTATTATCTATTTTAGGCCATTCCAAAATATTAGGTTACTTACCCTTCACTAAGAAGTCCAAATAAAGACTATATTGGTACTGTGGAAATGTAAGAATATAACTAGTGAATGATAGTTATGTATCCACGTATCCTAATCAATTTCTTCAAAATGGCCCTTATCATAAGTGGCTTATTTCCTAGGGATAGAGGAATTGCATTATAGCTTGAGAGCATCAGTCTTTTGTTAGTAGCCTTCCTTTGGTATATGGTGGTGCCCCATTGGTGTCTTCCTAATATATGCCTTTATTACTTGTCATAGAAATGAAAAAAAAAAAAAAACACAACTTGATTTTCTTATGGATTTTACTTGTATGGTTTCAGATTTGAGGTGTGTTTGTGGCTGTACTATGACTAGTTGACAACAAGATTACACTGCAGTTGGCAAGATTGAGTGCCAATTGTTAATTTGCAACATGGTGCTCTTTGCACAACTTTTCAAAGCTGATTTGTGTTTCTTACTAGATTGCTCAACTTCATAATTTGCAAAAAATAATGTTGTTTTTCTGAAACAAGTTCCACTGTGTAGTTCATGCCCGGCCCGGCGGCCCACACCCCCTCTCCCCCAAAAAATCTCAGCTTTGTTGCATGTCTGACTTTATTTATTATTAGGTTTATAATTTCCTGAATCCTGATATCTCTTGCACATACATACGCTCACCGCCTTTCCCTCCCTCTCTTTTTTCCGGTTAATTAACATAGATGAGGTTATACTATGTATCTATGAGTTTCTCTTTTTCTCCTCAGGCATCTTCCGGAAAGGGGAGTTTTAGGAAAGAAGTACTTATGGTAGATCCATTGGAGGCCAAGAAAATTGCTGACAAGCAAATGGTAGTGATAAAAACAGAAGAGAGATATGAGGTTCGTAATTTTCAGTCTTTGAACTTATTTGCAGCACAATTGGTGCTGCTTTCCTTTGCGACTGACATGTTAAAGCTAAATCTAGGGAAACTTAGTCCTGCGAAACCTTTAAGAATTAAGAGATCTGAAGTCCTTAGCCATGCTGTTTTATGTTTTCCTCCATTCTTGTTTACTTCAGAGGATTCTATAACTGTTTTATCTTGAAGCATTTCACTCTGGTAGGTTTGGAGTTTCGGACCAATTTATAATGGAAATCTAAAATCCACAAAGAACTAATGGGCTTCTATTGATTCCTTTTATATAAAAGGCTCAAATACAGTTCTAAGTTTCTAACTTCTGAAGGGTTGGCCTTATAAGTCAATGAACTAATGCTTGTTCTAATTTATCCACTCATTGACTCGCTACTGTGTGAGCTAAAAGCCTATAGTATTTATAGTGAACTATTCTTGTATTACTTTTGAACCTCTAGCTGTAATCCAGTAATGCAATTCATAATGCATTAATGTTTGATGGTTGATTTCTTAGGACCATAAGTTTAGCACGTTTTAATTGTGTGATTCTGGACAAGCCGAACTGTGTAACTTATATATGGAGTGATTAGGCTTTACCAGTTGCAGTCTTAACTGTTTGTGGTAGATAGTTACTGAAGAAAAAATGGATTTTTCTTTCTTGTTAAAAAGTTAAAACAACTCCGTCCATTCCACTCTTATTACTGATATTTGTAGGAGAATTATTTTAGAAAATGGCTTTGACTGGATTTGGGGTAAAAAAAAATCATATGCTTCTCACATTACACCTTCTCTTTCGAAGAAAATGGATGATTAAGCCCATTAAGGTGGAATACCTAAAATCAAAATGTACAATTAGGATAATCGTGAAACAAGCTAATCATGTATTGGTCACATATGTTTCCACCCATACTTCAGAGTTCAGATATAACCATTTTCCATGCCACAGGGATATTTGACTTATGGAGTTACTGTTTATATTGACCTAAGGGGCTCCATGTTCTTTATCTTTATTCAGTAATTCCTCTCATCTGTGATAAGTATAGCTTATTGGCCTTCAACACTACACTATTAGTTTTCCTTGTGATCTTTTAAATTTATCCCACCTTTCTTTTACCTCGTCACCTTGGGCTGAGCCTTGCCAGTTTTTTCTAACAGAGAATGAGAGACAGAACATCTTATTCTGTAATTCAGATTCAGGATTCATTTTGGTAAAAATCAATAAAGCATCGTTGCTCAATGCTGTCTAGATGGTTGTCAGTGACATACTGCCGCCATGTCATTTGACTTGTTATCACCCTCAATTCAGAAACAATAGTCATGTGGGAAAAATGCCACATGTCCTGCAATTGATTAGGTTTAAGAAATCTCTTCCACTTAATTTGGGTGATGGAGAGAGGACAACTATTATTTGAGGGGGTTTCAGTGAAAGAATGGTGGATCCTTAATTATCAGTGGTTACTGGTTAGGACTTACTACATTTGCATTATCATCCCCTCCCCTTTGGCCCTCCCACGTTAAAAAAATTGTAACAGGAGTTTCTGACTGCAGAGAAGGCGTCAAATTGAAGCGATCAATGGAGCATGGGCGATGATTGGCCTCACAATTGGTTTAGTCATCGAAGGTCATACAGGAAAGAGTTTCTTGGGTCAGGTATGTTTTTCTTTTTTCTTTATTTTTGGTGTAACTGTATTTTAAGACCTTTGAAGTAAGATATTTGAGTGTAACACACTAATGCTATTGTGTGATAGCTCGATGGATATCGGCATGCTGTTCTGAGCTTCTTCGTCTGGTGGTAGAAGTTTTCCCATTCGGGCATTTGAGTTTATAGCCGTAGATTGATGGAGTTTGTACATGTTCAAGAGATTTACATTCATCCCTACCAAATTCGCAAAAAAAAAAATCTGCTTACCATCTAATTCTTGTATTTTATTGTTTTTATCATCACATTTAATCAGACAACTCCGTTCATGCTGATTCTTTCAGCAAAAGAAATTCCAATGATAGAAACACATTGAAACCAATGTGATTTGATTTGATACCCTTGTTCTTGTAATGTGACATGATATACTCTTGTACTTCGTATGTTGTACTTTGTATTCTCACGAACTGTAAACGAGGCATTATCGTTACCGACATTTATAACCGATGAAGAAAACCGTGATGGGATAGCCGGAATATTCTACCGGGAAATAGTACTTTGCTTTGGTCATAGGAATTTCTGCATGAAATTCCGCCGGACATTTTTCACCAATCCTTTTTTTATTATTCATTGACTCG

mRNA sequence

GACAATTATGCCCTTTTGCCTCAACCACAACAACAAAATAGAACGAGAGGAAGAGGGAGAAAGAGCGTGGGAAATCATAGCTTGAAAATGGCAGCCTCAGCTCTTCCAATCACTGGATGCATTATCCCCTCCACCCCGCGTCAATCCTTCTTCACGCAACGTCCTGCTTCTATTTTGCAATGGAATTTGATGGGAAAGCAGCATCCAAGACAAAATGCGCATAAGAGGGGTGCGTTTCAAATGCTAGCCACTCCTAATGCATCTTCCGGAAAGGGGAGTTTTAGGAAAGAAGTACTTATGGTAGATCCATTGGAGGCCAAGAAAATTGCTGACAAGCAAATGGTAGTGATAAAAACAGAAGAGAGATATGAGAGAAGGCGTCAAATTGAAGCGATCAATGGAGCATGGGCGATGATTGGCCTCACAATTGGTTTAGTCATCGAAGGTCATACAGGAAAGAGTTTCTTGGGTCAGCTCGATGGATATCGGCATGCTGTTCTGAGCTTCTTCGTCTGGTGGTAGAAGTTTTCCCATTCGGGCATTTGAGTTTATAGCCGTAGATTGATGGAGTTTGTACATGTTCAAGAGATTTACATTCATCCCTACCAAATTCGCAAAAAAAAAAATCTGCTTACCATCTAATTCTTGTATTTTATTGTTTTTATCATCACATTTAATCAGACAACTCCGTTCATGCTGATTCTTTCAGCAAAAGAAATTCCAATGATAGAAACACATTGAAACCAATGTGATTTGATTTGATACCCTTGTTCTTGTAATGTGACATGATATACTCTTGTACTTCGTATGTTGTACTTTGTATTCTCACGAACTGTAAACGAGGCATTATCGTTACCGACATTTATAACCGATGAAGAAAACCGTGATGGGATAGCCGGAATATTCTACCGGGAAATAGTACTTTGCTTTGGTCATAGGAATTTCTGCATGAAATTCCGCCGGACATTTTTCACCAATCCTTTTTTTATTATTCATTGACTCG

Coding sequence (CDS)

ATGGCAGCCTCAGCTCTTCCAATCACTGGATGCATTATCCCCTCCACCCCGCGTCAATCCTTCTTCACGCAACGTCCTGCTTCTATTTTGCAATGGAATTTGATGGGAAAGCAGCATCCAAGACAAAATGCGCATAAGAGGGGTGCGTTTCAAATGCTAGCCACTCCTAATGCATCTTCCGGAAAGGGGAGTTTTAGGAAAGAAGTACTTATGGTAGATCCATTGGAGGCCAAGAAAATTGCTGACAAGCAAATGGTAGTGATAAAAACAGAAGAGAGATATGAGAGAAGGCGTCAAATTGAAGCGATCAATGGAGCATGGGCGATGATTGGCCTCACAATTGGTTTAGTCATCGAAGGTCATACAGGAAAGAGTTTCTTGGGTCAGCTCGATGGATATCGGCATGCTGTTCTGAGCTTCTTCGTCTGGTGGTAG

Protein sequence

MAASALPITGCIIPSTPRQSFFTQRPASILQWNLMGKQHPRQNAHKRGAFQMLATPNASSGKGSFRKEVLMVDPLEAKKIADKQMVVIKTEERYERRRQIEAINGAWAMIGLTIGLVIEGHTGKSFLGQLDGYRHAVLSFFVWW

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Spo16641.1	Spo16641.1	mRNA

Homology

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BLAST of Spo16641.1 vs. NCBI nr
Match: gi|902233295|gb|KNA22983.1| (hypothetical protein SOVF_028910 [Spinacia oleracea])

HSP 1 Score: 292.0 bits (746), Expect = 5.800e-76
Identity = 144/144 (100.00%), Postives = 144/144 (100.00%), Query Frame = 1

		  
Query: 1   MAASALPITGCIIPSTPRQSFFTQRPASILQWNLMGKQHPRQNAHKRGAFQMLATPNASS 60
           MAASALPITGCIIPSTPRQSFFTQRPASILQWNLMGKQHPRQNAHKRGAFQMLATPNASS
Sbjct: 1   MAASALPITGCIIPSTPRQSFFTQRPASILQWNLMGKQHPRQNAHKRGAFQMLATPNASS 60

Query: 61  GKGSFRKEVLMVDPLEAKKIADKQMVVIKTEERYERRRQIEAINGAWAMIGLTIGLVIEG 120
           GKGSFRKEVLMVDPLEAKKIADKQMVVIKTEERYERRRQIEAINGAWAMIGLTIGLVIEG
Sbjct: 61  GKGSFRKEVLMVDPLEAKKIADKQMVVIKTEERYERRRQIEAINGAWAMIGLTIGLVIEG 120

Query: 121 HTGKSFLGQLDGYRHAVLSFFVWW 145
           HTGKSFLGQLDGYRHAVLSFFVWW
Sbjct: 121 HTGKSFLGQLDGYRHAVLSFFVWW 144

[Close]

BLAST of Spo16641.1 vs. NCBI nr
Match: gi|731352768|ref|XP_010687710.1| (PREDICTED: uncharacterized protein LOC104901794 [Beta vulgaris subsp. vulgaris])

HSP 1 Score: 208.0 bits (528), Expect = 1.100e-50
Identity = 104/144 (72.22%), Postives = 119/144 (82.64%), Query Frame = 1

		  
Query: 1   MAASALPITGCIIPSTPRQSFFTQRPASILQWNLMGKQHPRQNAHKRGAFQMLATPNASS 60
           MAAS LP+ GCIIPST  QSFFTQ  ASILQWN +GKQH R+  + RGAF+MLA P+ SS
Sbjct: 1   MAASGLPVIGCIIPSTRCQSFFTQHSASILQWNFIGKQHSRRFTNTRGAFRMLANPDVSS 60

Query: 61  GKGSFRKEVLMVDPLEAKKIADKQMVVIKTEERYERRRQIEAINGAWAMIGLTIGLVIEG 120
           GK SFRKEVLMVDP+EAKK+A KQMV IKT+E++ERRR+IEAINGAWAMIGLT GL+IE 
Sbjct: 61  GKSSFRKEVLMVDPVEAKKLAAKQMVEIKTKEKFERRRRIEAINGAWAMIGLTAGLIIEC 120

Query: 121 HTGKSFLGQLDGYRHAVLSFFVWW 145
            TGK  LGQL+ Y H +LSFFV W
Sbjct: 121 QTGKGILGQLNEYWHTILSFFVRW 144

[Close]

BLAST of Spo16641.1 vs. NCBI nr
Match: gi|1000937230|ref|XP_015583994.1| (PREDICTED: uncharacterized protein LOC8259350 [Ricinus communis])

HSP 1 Score: 136.3 bits (342), Expect = 4.100e-29
Identity = 75/141 (53.19%), Postives = 97/141 (68.79%), Query Frame = 1

		  
Query: 4   SALPITGCIIPST--PRQSFFTQRPASILQWNLMGKQHPRQNAHKRGAFQMLATPNASSG 63
           S L I G ++ S+  P  S   QR A +++W    +     +  K  AF++LA PN  SG
Sbjct: 6   SPLSINGNLLLSSQYPFHSHILQRSAHVVKWGFR-RDKDSSSRTKSQAFRILANPNEVSG 65

Query: 64  KGSFRKEVLMVDPLEAKKIADKQMVVIKTEERYERRRQIEAINGAWAMIGLTIGLVIEGH 123
           K  F+KEV+MVDPLEAK++A KQM  I+ +E+++RRRQIEAINGAWAMIGLT GLVIEG 
Sbjct: 66  KRDFQKEVIMVDPLEAKRLAAKQMKEIQAKEKFKRRRQIEAINGAWAMIGLTAGLVIEGQ 125

Query: 124 TGKSFLGQLDGYRHAVLSFFV 143
           TGKS L QL GY  A++ FF+
Sbjct: 126 TGKSILDQLAGYWSAIVHFFL 145

[Close]

BLAST of Spo16641.1 vs. NCBI nr
Match: gi|802633462|ref|XP_012077487.1| (PREDICTED: uncharacterized protein LOC105638302 [Jatropha curcas])

HSP 1 Score: 134.8 bits (338), Expect = 1.200e-28
Identity = 79/145 (54.48%), Postives = 98/145 (67.59%), Query Frame = 1

		  
Query: 3   ASALPITGCIIPSTPRQSFFTQ--RPASILQWNLMGKQHPRQNAH---KRGAFQMLATPN 62
           +S LPI G I+ S    S      RPA+IL+W   G+     +A    KR AF++LA PN
Sbjct: 5   SSVLPINGNILISCQYSSLSLNLHRPATILKWGF-GRDRDNNSASSRTKRQAFRILANPN 64

Query: 63  ASSGKGSFRKEVLMVDPLEAKKIADKQMVVIKTEERYERRRQIEAINGAWAMIGLTIGLV 122
            S GKG  ++E++MVDPLEAK++A KQM  I+ +ER +RRR IEAINGAWAMIGLT GLV
Sbjct: 65  VS-GKGDSKREIIMVDPLEAKRLAAKQMQEIQAKERIKRRRLIEAINGAWAMIGLTAGLV 124

Query: 123 IEGHTGKSFLGQLDGYRHAVLSFFV 143
           IEG TGKS L QL GY  A++  FV
Sbjct: 125 IEGQTGKSILDQLAGYWFAIIHLFV 147

[Close]

BLAST of Spo16641.1 vs. NCBI nr
Match: gi|1009107385|ref|XP_015879487.1| (PREDICTED: uncharacterized protein LOC107415642 [Ziziphus jujuba])

HSP 1 Score: 133.3 bits (334), Expect = 3.500e-28
Identity = 74/144 (51.39%), Postives = 93/144 (64.58%), Query Frame = 1

		  
Query: 2   AASALPITGCIIPSTPRQSFFTQRPASILQ---WNLMGKQHPRQNAHKRGAFQMLATPNA 61
           + S LPI G    ST    F T RP+S +    W      +      +  AFQ+LA PN 
Sbjct: 3   STSLLPINGGYPLSTHCSFFPTHRPSSTISKWGWRRYEDANIVVYRTRSQAFQVLANPNV 62

Query: 62  SSGKGSFRKEVLMVDPLEAKKIADKQMVVIKTEERYERRRQIEAINGAWAMIGLTIGLVI 121
           S  KG F ++V+MVDPLEAK++A KQM  IK +E+++R+RQIEAINGAWAMIGL  GLVI
Sbjct: 63  SPNKGDFNRKVIMVDPLEAKRLAAKQMEQIKAKEKFKRQRQIEAINGAWAMIGLAAGLVI 122

Query: 122 EGHTGKSFLGQLDGYRHAVLSFFV 143
           EGHTGK  L QL GY   +++FFV
Sbjct: 123 EGHTGKGILAQLAGYWSIIVNFFV 146

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BLAST of Spo16641.1 vs. UniProtKB/TrEMBL
Match: A0A0K9RU45_SPIOL (Uncharacterized protein OS=Spinacia oleracea GN=SOVF_028910 PE=4 SV=1)

HSP 1 Score: 292.0 bits (746), Expect = 4.100e-76
Identity = 144/144 (100.00%), Postives = 144/144 (100.00%), Query Frame = 1

		  
Query: 1   MAASALPITGCIIPSTPRQSFFTQRPASILQWNLMGKQHPRQNAHKRGAFQMLATPNASS 60
           MAASALPITGCIIPSTPRQSFFTQRPASILQWNLMGKQHPRQNAHKRGAFQMLATPNASS
Sbjct: 1   MAASALPITGCIIPSTPRQSFFTQRPASILQWNLMGKQHPRQNAHKRGAFQMLATPNASS 60

Query: 61  GKGSFRKEVLMVDPLEAKKIADKQMVVIKTEERYERRRQIEAINGAWAMIGLTIGLVIEG 120
           GKGSFRKEVLMVDPLEAKKIADKQMVVIKTEERYERRRQIEAINGAWAMIGLTIGLVIEG
Sbjct: 61  GKGSFRKEVLMVDPLEAKKIADKQMVVIKTEERYERRRQIEAINGAWAMIGLTIGLVIEG 120

Query: 121 HTGKSFLGQLDGYRHAVLSFFVWW 145
           HTGKSFLGQLDGYRHAVLSFFVWW
Sbjct: 121 HTGKSFLGQLDGYRHAVLSFFVWW 144

[Close]

BLAST of Spo16641.1 vs. UniProtKB/TrEMBL
Match: A0A0J8BUG6_BETVU (Uncharacterized protein OS=Beta vulgaris subsp. vulgaris GN=BVRB_8g192300 PE=4 SV=1)

HSP 1 Score: 208.0 bits (528), Expect = 7.700e-51
Identity = 104/144 (72.22%), Postives = 119/144 (82.64%), Query Frame = 1

		  
Query: 1   MAASALPITGCIIPSTPRQSFFTQRPASILQWNLMGKQHPRQNAHKRGAFQMLATPNASS 60
           MAAS LP+ GCIIPST  QSFFTQ  ASILQWN +GKQH R+  + RGAF+MLA P+ SS
Sbjct: 1   MAASGLPVIGCIIPSTRCQSFFTQHSASILQWNFIGKQHSRRFTNTRGAFRMLANPDVSS 60

Query: 61  GKGSFRKEVLMVDPLEAKKIADKQMVVIKTEERYERRRQIEAINGAWAMIGLTIGLVIEG 120
           GK SFRKEVLMVDP+EAKK+A KQMV IKT+E++ERRR+IEAINGAWAMIGLT GL+IE 
Sbjct: 61  GKSSFRKEVLMVDPVEAKKLAAKQMVEIKTKEKFERRRRIEAINGAWAMIGLTAGLIIEC 120

Query: 121 HTGKSFLGQLDGYRHAVLSFFVWW 145
            TGK  LGQL+ Y H +LSFFV W
Sbjct: 121 QTGKGILGQLNEYWHTILSFFVRW 144

[Close]

BLAST of Spo16641.1 vs. UniProtKB/TrEMBL
Match: B9T892_RICCO (Putative uncharacterized protein (Fragment) OS=Ricinus communis GN=RCOM_0251910 PE=4 SV=1)

HSP 1 Score: 132.9 bits (333), Expect = 3.200e-28
Identity = 75/141 (53.19%), Postives = 97/141 (68.79%), Query Frame = 1

		  
Query: 4   SALPITGCIIPST--PRQSFFTQRPASILQWNLMGKQHPRQNAHKRGAFQMLATPNASSG 63
           S L I G ++ S+  P  S   QR A +++W    +     +  K  AF++LA PN S G
Sbjct: 6   SPLSINGNLLLSSQYPFHSHILQRSAHVVKWGFR-RDKDSSSRTKSQAFRILANPNVS-G 65

Query: 64  KGSFRKEVLMVDPLEAKKIADKQMVVIKTEERYERRRQIEAINGAWAMIGLTIGLVIEGH 123
           K  F+KEV+MVDPLEAK++A KQM  I+ +E+++RRRQIEAINGAWAMIGLT GLVIEG 
Sbjct: 66  KRDFQKEVIMVDPLEAKRLAAKQMKEIQAKEKFKRRRQIEAINGAWAMIGLTAGLVIEGQ 125

Query: 124 TGKSFLGQLDGYRHAVLSFFV 143
           TGKS L QL GY  A++ FF+
Sbjct: 126 TGKSILDQLAGYWSAIVHFFL 144

[Close]

BLAST of Spo16641.1 vs. UniProtKB/TrEMBL
Match: A0A0B0P3E8_GOSAR (Early light-induced, chloroplastic OS=Gossypium arboreum GN=F383_07234 PE=4 SV=1)

HSP 1 Score: 130.6 bits (327), Expect = 1.600e-27
Identity = 75/133 (56.39%), Postives = 91/133 (68.42%), Query Frame = 1

		  
Query: 12  IIPSTPRQSFFTQRPASILQWNLMGKQHPR--QNAHKRGAFQMLATPNASSGKGSFRKEV 71
           +  S+ RQ  F  R A+I +W+    Q      +  K  AFQ+LA PN SS KG+  KEV
Sbjct: 19  LFSSSNRQ--FPHRSATIFRWSFGRDQGSSLVTSRTKGRAFQILANPNVSSDKGNSGKEV 78

Query: 72  LMVDPLEAKKIADKQMVVIKTEERYERRRQIEAINGAWAMIGLTIGLVIEGHTGKSFLGQ 131
           +MVDPLEAK++A KQMV IK +E+ +RRRQIEAINGAWAMIGLT GLVIEG TGK  L Q
Sbjct: 79  IMVDPLEAKRLAAKQMVQIKAKEKAKRRRQIEAINGAWAMIGLTAGLVIEGQTGKGILEQ 138

Query: 132 LDGYRHAVLSFFV 143
           L GY  A++  FV
Sbjct: 139 LAGYLWAIVHIFV 149

[Close]

BLAST of Spo16641.1 vs. UniProtKB/TrEMBL
Match: D7T0R2_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_11s0065g00850 PE=4 SV=1)

HSP 1 Score: 130.2 bits (326), Expect = 2.000e-27
Identity = 76/148 (51.35%), Postives = 93/148 (62.84%), Query Frame = 1

		  
Query: 1   MAASALPITGCIIPSTPRQSFFTQRPASILQWNLMGKQH-----PRQNAHKRG-AFQMLA 60
           +++S LP  G +  S P        P    Q  L   Q      PR     RG AFQ+LA
Sbjct: 2   VSSSLLPFNGALFQSIPHP------PTVFFQRGLRRGQDASLVIPRTAHSTRGQAFQILA 61

Query: 61  TPNASSGKGSFRKEVLMVDPLEAKKIADKQMVVIKTEERYERRRQIEAINGAWAMIGLTI 120
            PN S+GKG+  KEV+MVDPLEAK++A KQM   K +E+ +RRR+IEAINGAWAM+GLT 
Sbjct: 62  NPNVSAGKGNSDKEVVMVDPLEAKRLAAKQMQEFKAKEKLKRRRRIEAINGAWAMLGLTA 121

Query: 121 GLVIEGHTGKSFLGQLDGYRHAVLSFFV 143
           GLVIEGHTG   L QL GY  A++ FFV
Sbjct: 122 GLVIEGHTGNGILAQLAGYWGAIVRFFV 143

[Close]

BLAST of Spo16641.1 vs. TAIR (Arabidopsis)
Match: AT4G28025.1 (unknown protein)

HSP 1 Score: 109.8 bits (273), Expect = 1.400e-24
Identity = 59/103 (57.28%), Postives = 71/103 (68.93%), Query Frame = 1

		  
Query: 43  NAHKRGAFQMLATPNASS----GKGSFRKEVLMVDPLEAKKIADKQMVVIKTEERYERRR 102
           N  + G  ++LA PN S     GK   +KEV+MVDPLEAK++A KQM  IK  E+ +RRR
Sbjct: 51  NRARVGVVRVLANPNVSPPPPPGKAKVKKEVIMVDPLEAKRLASKQMEEIKGREKQQRRR 110

Query: 103 QIEAINGAWAMIGLTIGLVIEGHTGKSFLGQLDGYRHAVLSFF 142
           +IEAINGAWA+IGL IGLVIE  TGK  L QL GY  AV+  F
Sbjct: 111 EIEAINGAWAIIGLMIGLVIEAQTGKGILAQLAGYWSAVVHLF 153

The following BLAST results are available for this feature:

BLAST of Spo16641.1 vs. NCBI nr
BLAST of Spo16641.1 vs. UniProtKB/TrEMBL
BLAST of Spo16641.1 vs. ExPASy Swiss-Prot
BLAST of Spo16641.1 vs. TAIR (Arabidopsis)

BLAST of Spo16641.1 vs. NCBI nr
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. NCBI nr)
Total hits: 5

Position :

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x 1


Match Name	E-value	Identity	Description
gi\|902233295\|gb\|KNA22983.1\|	5.8e-76	100.	hypothetical protein SOVF_0289...	[more]
gi\|731352768\|ref\|XP_010687710.1\|	1.1e-50	72.2	PREDICTED: uncharacterized pro...	[more]
gi\|1000937230\|ref\|XP_015583994.1\|	4.1e-29	53.1	PREDICTED: uncharacterized pro...	[more]
gi\|802633462\|ref\|XP_012077487.1\|	1.2e-28	54.4	PREDICTED: uncharacterized pro...	[more]
gi\|1009107385\|ref\|XP_015879487.1\|	3.5e-28	51.3	PREDICTED: uncharacterized pro...	[more]

BLAST of Spo16641.1 vs. UniProtKB/TrEMBL
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. UniprotKB/TrEMBL)
Total hits: 5

Position :

Zoom :

x 1


Match Name	E-value	Identity	Description
A0A0K9RU45_SPIOL	4.1e-76	100.	Uncharacterized protein OS=Spi...	[more]
A0A0J8BUG6_BETVU	7.7e-51	72.2	Uncharacterized protein OS=Bet...	[more]
B9T892_RICCO	3.2e-28	53.1	Putative uncharacterized prote...	[more]
A0A0B0P3E8_GOSAR	1.6e-27	56.3	Early light-induced, chloropla...	[more]
D7T0R2_VITVI	2.0e-27	51.3	Putative uncharacterized prote...	[more]

BLAST of Spo16641.1 vs. ExPASy Swiss-Prot
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. ExPASy SwissProt)
Total hits: 0

Position :

Zoom :

x 1


Match Name	E-value	Identity	Description

BLAST of Spo16641.1 vs. TAIR (Arabidopsis)
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. TAIR)
Total hits: 1

Position :

Zoom :

x 1


Match Name	E-value	Identity	Description
AT4G28025.1	1.4e-24	57.2	unknown protein	[more]

InterPro

Analysis Name: InterPro Annotations of S. oleracea
Date Performed: 2018-06-29

Position :

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x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR023329	Chlorophyll a/b binding protein domain	unknown	SSF103511	Chlorophyll a-b binding protein	coord: 89..130 score: 2.2
None	No IPR available	PANTHER	PTHR37752	FAMILY NOT NAMED	coord: 1..144 score: 1.5
None	No IPR available	PANTHER	PTHR37752:SF1	SUBFAMILY NOT NAMED	coord: 1..144 score: 1.5

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0019344	cysteine biosynthetic process
biological_process	GO:0016043	cellular component organization
biological_process	GO:0009073	aromatic amino acid family biosynthetic process
biological_process	GO:0009058	biosynthetic process
biological_process	GO:0044249	cellular biosynthetic process
biological_process	GO:0016192	vesicle-mediated transport
biological_process	GO:0015031	protein transport
biological_process	GO:0044085	cellular component biogenesis
biological_process	GO:0051186	cofactor metabolic process
biological_process	GO:0030154	cell differentiation
biological_process	GO:0019682	glyceraldehyde-3-phosphate metabolic process
biological_process	GO:0015996	chlorophyll catabolic process
biological_process	GO:0006139	nucleobase-containing compound metabolic process
biological_process	GO:1901576	organic substance biosynthetic process
biological_process	GO:0015979	photosynthesis
biological_process	GO:1901564	organonitrogen compound metabolic process
biological_process	GO:0016117	carotenoid biosynthetic process
biological_process	GO:0015995	chlorophyll biosynthetic process
biological_process	GO:0044281	small molecule metabolic process
biological_process	GO:0009744	response to sucrose
biological_process	GO:0008152	metabolic process
biological_process	GO:0015991	ATP hydrolysis coupled proton transport
biological_process	GO:0006636	unsaturated fatty acid biosynthetic process
biological_process	GO:0006744	ubiquinone biosynthetic process
biological_process	GO:0010027	thylakoid membrane organization
biological_process	GO:0006364	rRNA processing
biological_process	GO:0010114	response to red light
biological_process	GO:0019288	isopentenyl diphosphate biosynthetic process, methylerythritol 4-phosphate pathway
biological_process	GO:0009644	response to high light intensity
biological_process	GO:0010218	response to far red light
biological_process	GO:0009637	response to blue light
biological_process	GO:0010155	regulation of proton transport
biological_process	GO:0045893	positive regulation of transcription, DNA-templated
biological_process	GO:0006655	phosphatidylglycerol biosynthetic process
biological_process	GO:0009965	leaf morphogenesis
biological_process	GO:0006950	response to stress
biological_process	GO:0009639	response to red or far red light
biological_process	GO:0072593	reactive oxygen species metabolic process
biological_process	GO:0042742	defense response to bacterium
biological_process	GO:0009855	determination of bilateral symmetry
biological_process	GO:0006886	intracellular protein transport
biological_process	GO:0010014	meristem initiation
biological_process	GO:0006913	nucleocytoplasmic transport
biological_process	GO:0009944	polarity specification of adaxial/abaxial axis
biological_process	GO:0010075	regulation of meristem growth
biological_process	GO:0007264	small GTPase mediated signal transduction
biological_process	GO:0006571	tyrosine biosynthetic process
biological_process	GO:0000162	tryptophan biosynthetic process
biological_process	GO:0033587	shikimate biosynthetic process
biological_process	GO:0009664	plant-type cell wall organization
biological_process	GO:0009094	L-phenylalanine biosynthetic process
biological_process	GO:0009423	chorismate biosynthetic process
biological_process	GO:0006098	pentose-phosphate shunt
biological_process	GO:0030003	cellular cation homeostasis
biological_process	GO:0070838	divalent metal ion transport
biological_process	GO:0006661	phosphatidylinositol biosynthetic process
biological_process	GO:0016556	mRNA modification
biological_process	GO:0010150	leaf senescence
biological_process	GO:0055072	iron ion homeostasis
biological_process	GO:0019684	photosynthesis, light reaction
biological_process	GO:0006123	mitochondrial electron transport, cytochrome c to oxygen
biological_process	GO:0006457	protein folding
biological_process	GO:1902600	proton transmembrane transport
biological_process	GO:0006833	water transport
biological_process	GO:0009651	response to salt stress
biological_process	GO:0009750	response to fructose
cellular_component	GO:0005777	peroxisome
cellular_component	GO:0034357	photosynthetic membrane
cellular_component	GO:0044425	membrane part
cellular_component	GO:0009507	chloroplast
cellular_component	GO:0045277	respiratory chain complex IV
cellular_component	GO:0031410	cytoplasmic vesicle
cellular_component	GO:0005737	cytoplasm
cellular_component	GO:0005774	vacuolar membrane
cellular_component	GO:0005802	trans-Golgi network
cellular_component	GO:0005768	endosome
cellular_component	GO:0009535	chloroplast thylakoid membrane
cellular_component	GO:0016021	integral component of membrane
cellular_component	GO:0005622	intracellular
cellular_component	GO:0010319	stromule
cellular_component	GO:0016020	membrane
cellular_component	GO:0005576	extracellular region
cellular_component	GO:0005618	cell wall
cellular_component	GO:0010287	plastoglobule
cellular_component	GO:0005739	mitochondrion
cellular_component	GO:0009523	photosystem II
cellular_component	GO:0009941	chloroplast envelope
cellular_component	GO:0005886	plasma membrane
cellular_component	GO:0009512	cytochrome b6f complex
cellular_component	GO:0033116	endoplasmic reticulum-Golgi intermediate compartment membrane
cellular_component	GO:0005789	endoplasmic reticulum membrane
cellular_component	GO:0032580	Golgi cisterna membrane
cellular_component	GO:0005856	cytoskeleton
cellular_component	GO:0033179	proton-transporting V-type ATPase, V0 domain
cellular_component	GO:0009570	chloroplast stroma
molecular_function	GO:0003779	actin binding
molecular_function	GO:0003856	3-dehydroquinate synthase activity
molecular_function	GO:0003924	GTPase activity
molecular_function	GO:0005525	GTP binding
molecular_function	GO:0004129	cytochrome-c oxidase activity
molecular_function	GO:0042802	identical protein binding
molecular_function	GO:0015078	proton transmembrane transporter activity
molecular_function	GO:0047617	acyl-CoA hydrolase activity
molecular_function	GO:0016597	amino acid binding
molecular_function	GO:0016779	nucleotidyltransferase activity
molecular_function	GO:0016787	hydrolase activity
molecular_function	GO:0051537	2 iron, 2 sulfur cluster binding
molecular_function	GO:0046872	metal ion binding
molecular_function	GO:0019904	protein domain specific binding
molecular_function	GO:0031072	heat shock protein binding
molecular_function	GO:0051082	unfolded protein binding
molecular_function	GO:0016491	oxidoreductase activity
molecular_function	GO:0008685	2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase activity
molecular_function	GO:0051287	NAD binding

RNA-Seq Expression

Co-expression


Gene	r value	Expression
Spo24630	0.76	Barchart \| Table
Spo01448	0.75	Barchart \| Table
Spo07390	0.74	Barchart \| Table
Spo18578	0.74	Barchart \| Table
Spo12823	0.73	Barchart \| Table
Spo10940	0.71	Barchart \| Table
Spo22683	0.70	Barchart \| Table
Spo24732	0.70	Barchart \| Table
Spo22583	0.70	Barchart \| Table
Spo03896	0.70	Barchart \| Table
Spo16955	0.70	Barchart \| Table
Spo16079	0.70	Barchart \| Table
Spo11446	0.69	Barchart \| Table
Spo03251	0.69	Barchart \| Table
Spo19431	0.69	Barchart \| Table
Spo01714	0.69	Barchart \| Table
Spo07609	0.68	Barchart \| Table
Spo02573	0.68	Barchart \| Table
Spo03149	0.68	Barchart \| Table
Spo03195	0.68	Barchart \| Table
Spo06031	0.68	Barchart \| Table
Spo08620	0.68	Barchart \| Table
Spo23518	0.68	Barchart \| Table
Spo09335	0.68	Barchart \| Table
Spo13209	0.68	Barchart \| Table
Spo15540	0.68	Barchart \| Table
Spo01858	0.68	Barchart \| Table
Spo22052	0.67	Barchart \| Table
Spo24046	0.67	Barchart \| Table
Spo22811	0.67	Barchart \| Table
Spo04537	0.67	Barchart \| Table
Spo17860	0.67	Barchart \| Table
Spo02696	0.67	Barchart \| Table
Spo06689	0.67	Barchart \| Table
Spo22955	0.67	Barchart \| Table
Spo21144	0.66	Barchart \| Table
Spo02890	0.66	Barchart \| Table
Spo13441	0.66	Barchart \| Table
Spo16951	0.66	Barchart \| Table
Spo21046	0.65	Barchart \| Table
Spo14087	0.65	Barchart \| Table
Spo08850	0.65	Barchart \| Table
Spo23857	0.65	Barchart \| Table
Spo06294	0.65	Barchart \| Table
Spo05843	0.65	Barchart \| Table
Spo01686	0.65	Barchart \| Table
Spo25230	0.65	Barchart \| Table
Spo26610	0.65	Barchart \| Table