Spo12669 (gene) | SpinachBase

Overview


Name	Spo12669
Type	gene
Organism	Spinacia oleracea (Spinach)
Description	B-box type zinc finger protein
Location	Super_scaffold_178 : 71334 .. 73736 (+)

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGCTCCACAAAATCGCTCTTGCTAAATCAGACAAATTAGAAGAAGACTATCGCACTAGATACATTAAACTTAAGCTGAGTAAAGCAGAAGCGGAAAAGAAACACCTTTTCCAGGGAATGAAGTCTCAAGAGAGCTCTCGTTCTCTGCATGGAAATGACACTAATGATTCTTTACAGATGTTTGCGAATGCGCTAAAAAATCAGTACGTATATTTTCAAAATATTAATTTAAGTCTATGATTGAGGAATCCACGAAAATACACACCAAGTATGCTAGACAATGCACAAGTAGCAACAACATCATCATCTATGTTTTCCTTAGTGTACAAGAAAACTACAAATATGCTACTTCATATTAACCTTCAACCACATGATCAGTTCTCTTCATTCACTCCCCAAATCTCATAAATGGTTCTAGCAGTCGGATTAAGTCGAGCTAACTAAATTTATGACCGAATTCAATCCGATACCATGAAACAAACCCTATATTTTTTGTATTCCTTCTGAAAAAATTCCCAATTGCACAACAAAACTCATACCTCATACACAGTTATCCTAAGAAACTAATCAGTAGGTAGTTCCAACAAATCCCATAAGTCACCACTGAATTGAGATAACTAACAGAGCCAAGACTAAGTTGAAATTAAATTAAGACCAGAACCAGAACTGAATTCTAAAGACCATACCAAAACACCTAGCACAAGCCCATCAAAACAAAAAAAACCCTAATTCTAGTAAAATTAGAACGAAAAAATCAAATAAAAGGCATAAAATTCAATTGAAAACCTAATTAAATAAAATTAGCAACAAAGGTCGAATCGAATTCACCTATCAGACATTTCGAGGACGAAATTAATCGAAGATTAACGAAAAAATAGTTGCTTAATTCGCTTTCCCTTATTCTTCAATATAAAGCATGTTCGTCGATTGGAAGCAAAAAAATAGGGATTTTGAAACCCTAATTTTAGGTTTGTGAAGATAAATGTAGAAGGAGAGAGATAGGACTTACAAACTACTCGAAAACGCCATTGATGAATTAAAATTTGAGCTTCGGTTGAAGATGTGAGATGACTGAGGGGATCAAAATTTTCCAAGAGCGTTCCAAGGAAACAGAAACAGTAGAGAGGATTTAGAGGAGGAGAGAGAAAACGGACAGAAGAGAGAGAAAGAAAACTTGAGAATTGGGTTGAGAGAGGAGGTCATTCAGCGATGTAAATTTACTATATTGTCCTTACTTTTTTTATTTGGTCGGGCAAGGTGAGAGTCGTTCGATTGAAAACGGTTGAGATTGGTTCTCAGTTCTTATCTTAAGGGGTGGTTCTCACCAGATCCTGATTTTATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATAAAGTAACACTCCAGGATATTAGTCCGGACCACTAACTAGTTTAAACTTAAAAGTGTAATTAGAATGTTGACTCACAAGAAAGTAGCATGTTCACGTTCACCTTCATAATTAAATAGAAATTAATTAAAAGAAATAAAATTTGAACTTTGTACTAATCAAATAATTAGGCCGGGTGTACCCTTTGAATCCACCTGAAGAATCATATCATATGGTTTATATTTATTTACATTAAAAAGAAATGACTATAGCCACAACTTCTCCTAGTTGTCACTATAATAAGCAATACAAGCAAATTCATGATTTTTTTTTTTAAAAAAAAATAATAAAAATATCTTCTCCCAAATCTCTTAAATCCAACCATAAACTTAGGCCAGGCAATATTTTTCATTATTAGCTAACTTCCAACTTGCCAAAACCATACTTTTTCCACCTTAAAATTAGTGGTAAAATAGAAGAAAAATAAACAAAATTATTCTTCCTTGTTTAATTTGGAGGATTTGGAAAGAAAAAAAAAATGAGGGTGAAGAGGAAATGTGAGTTATGTAGCAATATTGCTACAATATTTTGTGAATCGGATCAAGCAAATTTATGTTATGAATGTGATTCCAAAGTTCATGGTGCTAATTTTCTTGTTTCAAAACACTCTAGGACTCTTCTTTGTCATATTTGTCAATCTCCTACACTATGGTCCGGGTCCGGCCCGAAGTTCGGACCAACTCTCTCCGTTTGCCCGGGTTGCCTTATTGAAAGGCAGCGTAGAGATGTTGGTAACAATGGTAATGGTGGCCGTGAAGTGGCCGATGAAGATTACGATGATGATGATAATGATGATGACGATGACGATGACAATGACGACGATGGAGACAATGGTTATGAAGATGATGAGAGTGATGATGGTAATGATGATGTTGATGAGGATGAAGATGATGAAGAAAATCAAGTTGTTCCATGGTCATATTCAGTGTCACATCCAGGGTAA

mRNA sequence

ATGCTCCACAAAATCGCTCTTGCTAAATCAGACAAATTAGAAGAAGACTATCGCACTAGATACATTAAACTTAAGCTGAGTAAAGCAGAAGCGGAAAAGAAACACCTTTTCCAGGGAATGAAGTCTCAAGAGAGCTCTCGTTCTCTGCATGGAAATGACACTAATGATTCTTTACAGATGTTTGCGAATGCGCTAAAAAATCAGACTCTTCTTTGTCATATTTGTCAATCTCCTACACTATGGTCCGGGTCCGGCCCGAAGTTCGGACCAACTCTCTCCGTTTGCCCGGGTTGCCTTATTGAAAGGCAGCGTAGAGATGTTGGTAACAATGGTAATGGTGGCCGTGAAGTGGCCGATGAAGATTACGATGATGATGATAATGATGATGACGATGACGATGACAATGACGACGATGGAGACAATGGTTATGAAGATGATGAGAGTGATGATGGTAATGATGATGTTGATGAGGATGAAGATGATGAAGAAAATCAAGTTGTTCCATGGTCATATTCAGTGTCACATCCAGGGTAA

Coding sequence (CDS)

ATGCTCCACAAAATCGCTCTTGCTAAATCAGACAAATTAGAAGAAGACTATCGCACTAGATACATTAAACTTAAGCTGAGTAAAGCAGAAGCGGAAAAGAAACACCTTTTCCAGGGAATGAAGTCTCAAGAGAGCTCTCGTTCTCTGCATGGAAATGACACTAATGATTCTTTACAGATGTTTGCGAATGCGCTAAAAAATCAGACTCTTCTTTGTCATATTTGTCAATCTCCTACACTATGGTCCGGGTCCGGCCCGAAGTTCGGACCAACTCTCTCCGTTTGCCCGGGTTGCCTTATTGAAAGGCAGCGTAGAGATGTTGGTAACAATGGTAATGGTGGCCGTGAAGTGGCCGATGAAGATTACGATGATGATGATAATGATGATGACGATGACGATGACAATGACGACGATGGAGACAATGGTTATGAAGATGATGAGAGTGATGATGGTAATGATGATGTTGATGAGGATGAAGATGATGAAGAAAATCAAGTTGTTCCATGGTCATATTCAGTGTCACATCCAGGGTAA

Protein sequence

MLHKIALAKSDKLEEDYRTRYIKLKLSKAEAEKKHLFQGMKSQESSRSLHGNDTNDSLQMFANALKNQTLLCHICQSPTLWSGSGPKFGPTLSVCPGCLIERQRRDVGNNGNGGREVADEDYDDDDNDDDDDDDNDDDGDNGYEDDESDDGNDDVDEDEDDEENQVVPWSYSVSHPG

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Spo12669.1	Spo12669.1	mRNA

Homology

[Close]

BLAST of Spo12669.1 vs. NCBI nr
Match: gi|731377491|ref|XP_010667890.1| (PREDICTED: B-box zinc finger protein 32-like [Beta vulgaris subsp. vulgaris])

HSP 1 Score: 114.0 bits (284), Expect = 2.700e-22
Identity = 75/119 (63.03%), Postives = 89/119 (74.79%), Query Frame = 1

		  
Query: 61  FANALKNQTLLCHICQSPTLWSGSGPKFGPTLSVCPGCLIER----QRRDVGNNGNGGRE 120
           F  A  ++TLLCH+CQSPTLW+GSGPKFGPTLSVCP CL       + RDV N  N   E
Sbjct: 38  FLVAKHSRTLLCHVCQSPTLWTGSGPKFGPTLSVCPACLSSNRAIARHRDVKNGDNHEDE 97

Query: 121 VADEDYDDDDNDDDDDDDNDDDGDNGYEDDESDDGNDDVDEDEDDEENQVVPWSYSVSH 176
             D+D DD    ++DDD+++DDGDNG E+D SD+G+DD DE EDDEENQVVPWSYSVSH
Sbjct: 98  DRDDDKDDGGGSNEDDDEDNDDGDNGSEEDGSDNGDDD-DEHEDDEENQVVPWSYSVSH 155

[Close]

BLAST of Spo12669.1 vs. NCBI nr
Match: gi|902227838|gb|KNA20852.1| (hypothetical protein SOVF_048640 [Spinacia oleracea])

HSP 1 Score: 112.1 bits (279), Expect = 1.000e-21
Identity = 58/67 (86.57%), Postives = 63/67 (94.03%), Query Frame = 1

		  
Query: 1   MLHKIALAKSDKLEEDYRTRYIKLKLSKAEAEKKHLFQGMKSQESSRSLHGNDTNDSLQM 60
           ML KIALAKS+K EEDYRTRY+KLKLS+AEAEKKHLFQ MK+QE+SRSLHGNDTNDS QM
Sbjct: 448 MLQKIALAKSEKSEEDYRTRYLKLKLSEAEAEKKHLFQKMKAQETSRSLHGNDTNDSSQM 507

Query: 61  FANALKN 68
           FANALKN
Sbjct: 508 FANALKN 514

[Close]

BLAST of Spo12669.1 vs. NCBI nr
Match: gi|731371139|ref|XP_010665950.1| (PREDICTED: OBERON-like protein [Beta vulgaris subsp. vulgaris])

HSP 1 Score: 99.0 bits (245), Expect = 8.900e-18
Identity = 52/67 (77.61%), Postives = 59/67 (88.06%), Query Frame = 1

		  
Query: 1   MLHKIALAKSDKLEEDYRTRYIKLKLSKAEAEKKHLFQGMKSQESSRSLHGNDTNDSLQM 60
           ML KIALAKS+K EEDYR RY+KLKLS+AEAEK++LFQ MK QESSR+LH ND NDS QM
Sbjct: 448 MLQKIALAKSEKSEEDYRNRYLKLKLSEAEAEKQYLFQKMKVQESSRALHANDGNDSSQM 507

Query: 61  FANALKN 68
           F+NALKN
Sbjct: 508 FSNALKN 514

[Close]

BLAST of Spo12669.1 vs. NCBI nr
Match: gi|1000954522|ref|XP_015578163.1| (PREDICTED: zinc finger protein CONSTANS-LIKE 4 isoform X2 [Ricinus communis])

HSP 1 Score: 75.9 bits (185), Expect = 8.100e-11
Identity = 61/117 (52.14%), Postives = 75/117 (64.10%), Query Frame = 1

		  
Query: 61  FANALKNQTLLCHICQSPTLWSGSGPKFGPTLSVCPGCLIERQRRDVGNNGNGGREVADE 120
           F  A  ++TLLCH+CQS T W+ SGP+  PT+S+C  C+ +   R    N +      D 
Sbjct: 35  FLVAKHSRTLLCHLCQSFTPWTASGPRLRPTVSICDNCVKDSTCRPERRNKD------DR 94

Query: 121 DYDDDDNDDDDDDDNDDDGDNG-YEDDESDDGNDDVDEDEDDEENQVVPWSYSVSHP 177
           ++DDDDNDDDDDDD D DGD G  EDDES DG      DEDDEENQVVPWS + + P
Sbjct: 95  NHDDDDNDDDDDDD-DGDGDTGDSEDDESGDGG-----DEDDEENQVVPWSSTSAPP 139

[Close]

BLAST of Spo12669.1 vs. NCBI nr
Match: gi|1000954520|ref|XP_015578162.1| (PREDICTED: zinc finger protein CONSTANS-LIKE 4 isoform X1 [Ricinus communis])

HSP 1 Score: 75.9 bits (185), Expect = 8.100e-11
Identity = 61/117 (52.14%), Postives = 75/117 (64.10%), Query Frame = 1

		  
Query: 61  FANALKNQTLLCHICQSPTLWSGSGPKFGPTLSVCPGCLIERQRRDVGNNGNGGREVADE 120
           F  A  ++TLLCH+CQS T W+ SGP+  PT+S+C  C+ +   R    N +      D 
Sbjct: 35  FLVAKHSRTLLCHLCQSFTPWTASGPRLRPTVSICDNCVKDSTCRPERRNKD------DR 94

Query: 121 DYDDDDNDDDDDDDNDDDGDNG-YEDDESDDGNDDVDEDEDDEENQVVPWSYSVSHP 177
           ++DDDDNDDDDDDD D DGD G  EDDES DG      DEDDEENQVVPWS + + P
Sbjct: 95  NHDDDDNDDDDDDD-DGDGDTGDSEDDESGDGG-----DEDDEENQVVPWSSTSAPP 139

[Close]

BLAST of Spo12669.1 vs. UniProtKB/TrEMBL
Match: A0A0J8B260_BETVU (Uncharacterized protein OS=Beta vulgaris subsp. vulgaris GN=BVRB_012890 PE=4 SV=1)

HSP 1 Score: 114.0 bits (284), Expect = 1.900e-22
Identity = 75/119 (63.03%), Postives = 89/119 (74.79%), Query Frame = 1

		  
Query: 61  FANALKNQTLLCHICQSPTLWSGSGPKFGPTLSVCPGCLIER----QRRDVGNNGNGGRE 120
           F  A  ++TLLCH+CQSPTLW+GSGPKFGPTLSVCP CL       + RDV N  N   E
Sbjct: 38  FLVAKHSRTLLCHVCQSPTLWTGSGPKFGPTLSVCPACLSSNRAIARHRDVKNGDNHEDE 97

Query: 121 VADEDYDDDDNDDDDDDDNDDDGDNGYEDDESDDGNDDVDEDEDDEENQVVPWSYSVSH 176
             D+D DD    ++DDD+++DDGDNG E+D SD+G+DD DE EDDEENQVVPWSYSVSH
Sbjct: 98  DRDDDKDDGGGSNEDDDEDNDDGDNGSEEDGSDNGDDD-DEHEDDEENQVVPWSYSVSH 155

[Close]

BLAST of Spo12669.1 vs. UniProtKB/TrEMBL
Match: A0A0K9RPT4_SPIOL (Uncharacterized protein OS=Spinacia oleracea GN=SOVF_048640 PE=4 SV=1)

HSP 1 Score: 112.1 bits (279), Expect = 7.100e-22
Identity = 58/67 (86.57%), Postives = 63/67 (94.03%), Query Frame = 1

		  
Query: 1   MLHKIALAKSDKLEEDYRTRYIKLKLSKAEAEKKHLFQGMKSQESSRSLHGNDTNDSLQM 60
           ML KIALAKS+K EEDYRTRY+KLKLS+AEAEKKHLFQ MK+QE+SRSLHGNDTNDS QM
Sbjct: 448 MLQKIALAKSEKSEEDYRTRYLKLKLSEAEAEKKHLFQKMKAQETSRSLHGNDTNDSSQM 507

Query: 61  FANALKN 68
           FANALKN
Sbjct: 508 FANALKN 514

[Close]

BLAST of Spo12669.1 vs. UniProtKB/TrEMBL
Match: A0A0J8B5D7_BETVU (Uncharacterized protein OS=Beta vulgaris subsp. vulgaris GN=BVRB_9g225080 PE=4 SV=1)

HSP 1 Score: 99.0 bits (245), Expect = 6.200e-18
Identity = 52/67 (77.61%), Postives = 59/67 (88.06%), Query Frame = 1

		  
Query: 1   MLHKIALAKSDKLEEDYRTRYIKLKLSKAEAEKKHLFQGMKSQESSRSLHGNDTNDSLQM 60
           ML KIALAKS+K EEDYR RY+KLKLS+AEAEK++LFQ MK QESSR+LH ND NDS QM
Sbjct: 448 MLQKIALAKSEKSEEDYRNRYLKLKLSEAEAEKQYLFQKMKVQESSRALHANDGNDSSQM 507

Query: 61  FANALKN 68
           F+NALKN
Sbjct: 508 FSNALKN 514

[Close]

BLAST of Spo12669.1 vs. UniProtKB/TrEMBL
Match: U5GE06_POPTR (Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0004s02600g PE=4 SV=1)

HSP 1 Score: 75.5 bits (184), Expect = 7.300e-11
Identity = 59/124 (47.58%), Postives = 75/124 (60.48%), Query Frame = 1

		  
Query: 53  DTNDSLQMFANALKNQTLLCHICQSPTLWSGSGPKFGPTLSVCPGCLIERQRRDVGNNGN 112
           D N     F  A  ++TLLCH+CQS T W+G+GPK GPTLSVC  C+     R+      
Sbjct: 27  DANVHSANFLVAKHSRTLLCHVCQSLTPWTGTGPKLGPTLSVCDNCVSNSSCRE--ERST 86

Query: 113 GGREVADEDYDDDDNDDDDDDDNDDDGDNGYEDDESDDGNDDVDEDEDDEENQVVPWSYS 172
              +  D D DDDD +DDDDDD+D + D+G +++  D GND     EDDEENQVVPWS +
Sbjct: 87  EDDKDVDNDDDDDDREDDDDDDDDREDDSGEDNENGDGGND--HGSEDDEENQVVPWSST 146

Query: 173 VSHP 177
              P
Sbjct: 147 PPPP 146

[Close]

BLAST of Spo12669.1 vs. UniProtKB/TrEMBL
Match: A0A061GF15_THECC (B-box type zinc finger family protein, putative isoform 2 OS=Theobroma cacao GN=TCM_030024 PE=4 SV=1)

HSP 1 Score: 75.5 bits (184), Expect = 7.300e-11
Identity = 53/103 (51.46%), Postives = 61/103 (59.22%), Query Frame = 1

		  
Query: 68  QTLLCHICQSPTLWSGSGPKFGPTLSVCPGCLIERQRRDVGNNGNGGREVADEDYDDDDN 127
           +TLLCH+CQSPT W+GSGPK GPT+S C  C+     R+  NN     E   ED DDDD+
Sbjct: 42  RTLLCHLCQSPTPWNGSGPKLGPTVSACDNCVNRNACREESNNEETHDE---EDEDDDDD 101

Query: 128 DDDDDDDNDDDGDNGYEDDESDDGNDDVDEDEDDEENQVVPWS 171
            D +DD  DDDGDNG                 DDEENQVVPWS
Sbjct: 102 LDGEDDSEDDDGDNG-----------------DDEENQVVPWS 124

[Close]

BLAST of Spo12669.1 vs. ExPASy Swiss-Prot
Match: PVIP_NICBE (OBERON-like protein OS=Nicotiana benthamiana GN=PVIP PE=1 SV=1)

HSP 1 Score: 58.5 bits (140), Expect = 8.300e-8
Identity = 33/67 (49.25%), Postives = 50/67 (74.63%), Query Frame = 1

		  
Query: 2   LHKIALAKSDKLEEDYRTRYIKLKLSKAEAEKKHLFQGMKSQESSRSLHGN-DTNDSLQM 61
           L +IALAK++K EEDY +RY+K +LS+AEAEK++LF+ +K QESSR+   +   ND  QM
Sbjct: 478 LQRIALAKTEKSEEDYASRYLKQRLSEAEAEKQYLFEKIKLQESSRASQSSAGGNDPSQM 537

Query: 62  FANALKN 68
             + +++
Sbjct: 538 MYSKIQD 544

[Close]

BLAST of Spo12669.1 vs. ExPASy Swiss-Prot
Match: PVIP_PEA (OBERON-like protein (Fragment) OS=Pisum sativum GN=PVIP PE=1 SV=1)

HSP 1 Score: 57.8 bits (138), Expect = 1.400e-7
Identity = 31/61 (50.82%), Postives = 45/61 (73.77%), Query Frame = 1

		  
Query: 2   LHKIALAKSDKLEEDYRTRYIKLKLSKAEAEKKHLFQGMKSQESSRSLHGNDTNDSLQMF 61
           L +IALAKSDK EE+Y + Y+K KLS+AEAEK++L++ +K QESSR    +    S+ M+
Sbjct: 426 LQRIALAKSDKSEEEYTSNYLKQKLSEAEAEKQYLYEKIKLQESSRLSQSSGDPSSMLMY 485

Query: 62  A 63
           +
Sbjct: 486 S 486

[Close]

BLAST of Spo12669.1 vs. TAIR (Arabidopsis)
Match: AT5G48160.1 (Protein of unknown function (DUF1423))

HSP 1 Score: 51.6 bits (122), Expect = 5.700e-7
Identity = 26/46 (56.52%), Postives = 37/46 (80.43%), Query Frame = 1

		  
Query: 2   LHKIALAKSDKLEEDYRTRYIKLKLSKAEAEKKHLFQGMKSQESSR 48
           L +I LAK DK EE+Y + Y+K +LS+AEAEK++LF+ +K QE+SR
Sbjct: 481 LQRIVLAKMDKSEEEYASNYLKQRLSEAEAEKQYLFEKIKLQENSR 526

[Close]

BLAST of Spo12669.1 vs. TAIR (Arabidopsis)
Match: AT3G07780.1 (Protein of unknown function (DUF1423))

HSP 1 Score: 49.7 bits (117), Expect = 2.200e-6
Identity = 24/44 (54.55%), Postives = 35/44 (79.55%), Query Frame = 1

		  
Query: 2   LHKIALAKSDKLEEDYRTRYIKLKLSKAEAEKKHLFQGMKSQES 46
           L +I  AK +K EE+Y + Y+KL+LS+AEAEK++LF+ +K QES
Sbjct: 479 LERIVKAKKEKTEEEYASNYLKLRLSEAEAEKEYLFEKIKEQES 522

The following BLAST results are available for this feature:

BLAST of Spo12669.1 vs. NCBI nr
BLAST of Spo12669.1 vs. UniProtKB/TrEMBL
BLAST of Spo12669.1 vs. ExPASy Swiss-Prot
BLAST of Spo12669.1 vs. TAIR (Arabidopsis)

BLAST of Spo12669.1 vs. NCBI nr
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. NCBI nr)
Total hits: 5

Position :

Zoom :

x 1


Match Name	E-value	Identity	Description
gi\|731377491\|ref\|XP_010667890.1\|	2.7e-22	63.0	PREDICTED: B-box zinc finger p...	[more]
gi\|902227838\|gb\|KNA20852.1\|	1.0e-21	86.5	hypothetical protein SOVF_0486...	[more]
gi\|731371139\|ref\|XP_010665950.1\|	8.9e-18	77.6	PREDICTED: OBERON-like protein...	[more]
gi\|1000954522\|ref\|XP_015578163.1\|	8.1e-11	52.1	PREDICTED: zinc finger protein...	[more]
gi\|1000954520\|ref\|XP_015578162.1\|	8.1e-11	52.1	PREDICTED: zinc finger protein...	[more]

BLAST of Spo12669.1 vs. UniProtKB/TrEMBL
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. UniprotKB/TrEMBL)
Total hits: 5

Position :

Zoom :

x 1


Match Name	E-value	Identity	Description
A0A0J8B260_BETVU	1.9e-22	63.0	Uncharacterized protein OS=Bet...	[more]
A0A0K9RPT4_SPIOL	7.1e-22	86.5	Uncharacterized protein OS=Spi...	[more]
A0A0J8B5D7_BETVU	6.2e-18	77.6	Uncharacterized protein OS=Bet...	[more]
U5GE06_POPTR	7.3e-11	47.5	Uncharacterized protein OS=Pop...	[more]
A0A061GF15_THECC	7.3e-11	51.4	B-box type zinc finger family ...	[more]

BLAST of Spo12669.1 vs. ExPASy Swiss-Prot
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. ExPASy SwissProt)
Total hits: 2

Position :

Zoom :

x 1


Match Name	E-value	Identity	Description
PVIP_NICBE	8.3e-8	49.2	OBERON-like protein OS=Nicotia...	[more]
PVIP_PEA	1.4e-7	50.8	OBERON-like protein (Fragment)...	[more]

BLAST of Spo12669.1 vs. TAIR (Arabidopsis)
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. TAIR)
Total hits: 2

Position :

Zoom :

x 1


Match Name	E-value	Identity	Description
AT5G48160.1	5.7e-7	56.5	Protein of unknown function (D...	[more]
AT3G07780.1	2.2e-6	54.5	Protein of unknown function (D...	[more]

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0009812	flavonoid metabolic process
biological_process	GO:0006886	intracellular protein transport
biological_process	GO:0009753	response to jasmonic acid
biological_process	GO:0006857	oligopeptide transport
biological_process	GO:0042128	nitrate assimilation
biological_process	GO:0070838	divalent metal ion transport
biological_process	GO:0030003	cellular cation homeostasis
biological_process	GO:0046520	sphingoid biosynthetic process
biological_process	GO:0007264	small GTPase mediated signal transduction
biological_process	GO:0006913	nucleocytoplasmic transport
biological_process	GO:0006333	chromatin assembly or disassembly
biological_process	GO:0043132	NAD transport
biological_process	GO:0080065	4-alpha-methyl-delta7-sterol oxidation
biological_process	GO:0016567	protein ubiquitination
biological_process	GO:0016126	sterol biosynthetic process
biological_process	GO:0019745	pentacyclic triterpenoid biosynthetic process
biological_process	GO:0008152	metabolic process
biological_process	GO:0006574	valine catabolic process
biological_process	GO:0006552	leucine catabolic process
biological_process	GO:0006550	isoleucine catabolic process
biological_process	GO:0009611	response to wounding
biological_process	GO:0055085	transmembrane transport
biological_process	GO:0006855	drug transmembrane transport
biological_process	GO:0009821	alkaloid biosynthetic process
biological_process	GO:0050789	regulation of biological process
biological_process	GO:0007275	multicellular organism development
biological_process	GO:0009987	cellular process
biological_process	GO:0006508	proteolysis
biological_process	GO:0006571	tyrosine biosynthetic process
biological_process	GO:0000162	tryptophan biosynthetic process
biological_process	GO:0009094	L-phenylalanine biosynthetic process
biological_process	GO:0006536	glutamate metabolic process
biological_process	GO:0006103	2-oxoglutarate metabolic process
biological_process	GO:0006810	transport
biological_process	GO:0016123	xanthophyll biosynthetic process
biological_process	GO:0010182	sugar mediated signaling pathway
biological_process	GO:0009408	response to heat
biological_process	GO:0009688	abscisic acid biosynthetic process
biological_process	GO:0006950	response to stress
biological_process	GO:0048838	release of seed from dormancy
biological_process	GO:0046345	abscisic acid catabolic process
biological_process	GO:0071805	potassium ion transmembrane transport
biological_process	GO:0046950	cellular ketone body metabolic process
biological_process	GO:0009813	flavonoid biosynthetic process
biological_process	GO:0009845	seed germination
biological_process	GO:0009811	stilbene biosynthetic process
biological_process	GO:0009658	chloroplast organization
biological_process	GO:0010264	myo-inositol hexakisphosphate biosynthetic process
biological_process	GO:0045893	positive regulation of transcription, DNA-templated
biological_process	GO:0050896	response to stimulus
biological_process	GO:0055114	oxidation-reduction process
biological_process	GO:0000160	phosphorelay signal transduction system
biological_process	GO:0006598	polyamine catabolic process
biological_process	GO:0009737	response to abscisic acid
biological_process	GO:0009409	response to cold
biological_process	GO:0009414	response to water deprivation
biological_process	GO:0016117	carotenoid biosynthetic process
biological_process	GO:0006633	fatty acid biosynthetic process
biological_process	GO:0009805	coumarin biosynthetic process
biological_process	GO:0009809	lignin biosynthetic process
biological_process	GO:0009639	response to red or far red light
biological_process	GO:0010114	response to red light
biological_process	GO:0042538	hyperosmotic salinity response
biological_process	GO:0009686	gibberellin biosynthetic process
biological_process	GO:0009740	gibberellic acid mediated signaling pathway
cellular_component	GO:0005622	intracellular
cellular_component	GO:0000785	chromatin
cellular_component	GO:0009535	chloroplast thylakoid membrane
cellular_component	GO:0009706	chloroplast inner membrane
cellular_component	GO:0005739	mitochondrion
cellular_component	GO:0005618	cell wall
cellular_component	GO:0005886	plasma membrane
cellular_component	GO:0005759	mitochondrial matrix
cellular_component	GO:0005777	peroxisome
cellular_component	GO:0009507	chloroplast
cellular_component	GO:0005634	nucleus
cellular_component	GO:0005783	endoplasmic reticulum
cellular_component	GO:0005829	cytosol
cellular_component	GO:0009941	chloroplast envelope
cellular_component	GO:0005576	extracellular region
cellular_component	GO:0005773	vacuole
cellular_component	GO:0043231	intracellular membrane-bounded organelle
cellular_component	GO:0031969	chloroplast membrane
cellular_component	GO:0016021	integral component of membrane
cellular_component	GO:0005789	endoplasmic reticulum membrane
molecular_function	GO:0005509	calcium ion binding
molecular_function	GO:0016491	oxidoreductase activity
molecular_function	GO:0035251	UDP-glucosyltransferase activity
molecular_function	GO:0052663	antheraxanthin epoxidase activity
molecular_function	GO:0052662	zeaxanthin epoxidase activity
molecular_function	GO:0009540	zeaxanthin epoxidase [overall] activity
molecular_function	GO:0008270	zinc ion binding
molecular_function	GO:0015238	drug transmembrane transporter activity
molecular_function	GO:0015297	antiporter activity
molecular_function	GO:0008233	peptidase activity
molecular_function	GO:0008234	cysteine-type peptidase activity
molecular_function	GO:0032440	2-alkenal reductase [NAD(P)] activity
molecular_function	GO:0003677	DNA binding
molecular_function	GO:0080130	L-phenylalanine:2-oxoglutarate aminotransferase activity
molecular_function	GO:0004838	L-tyrosine:2-oxoglutarate aminotransferase activity
molecular_function	GO:0030170	pyridoxal phosphate binding
molecular_function	GO:0016207	4-coumarate-CoA ligase activity
molecular_function	GO:0005267	potassium channel activity
molecular_function	GO:0016740	transferase activity
molecular_function	GO:0016616	oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor
molecular_function	GO:0008289	lipid binding
molecular_function	GO:0003824	catalytic activity
molecular_function	GO:0016711	flavonoid 3'-monooxygenase activity
molecular_function	GO:0080048	GDP-D-glucose phosphorylase activity
molecular_function	GO:0005524	ATP binding
molecular_function	GO:0016787	hydrolase activity
molecular_function	GO:0046872	metal ion binding
molecular_function	GO:0004419	hydroxymethylglutaryl-CoA lyase activity
molecular_function	GO:0000254	C-4 methylsterol oxidase activity
molecular_function	GO:0003924	GTPase activity
molecular_function	GO:0005525	GTP binding
molecular_function	GO:0008131	primary amine oxidase activity
molecular_function	GO:0009055	electron transfer activity
molecular_function	GO:0046592	polyamine oxidase activity
molecular_function	GO:0047077	Photinus-luciferin 4-monooxygenase (ATP-hydrolyzing) activity
molecular_function	GO:0005506	iron ion binding
molecular_function	GO:0051724	NAD transmembrane transporter activity
molecular_function	GO:0020037	heme binding
molecular_function	GO:0005215	transporter activity
molecular_function	GO:0005515	protein binding
molecular_function	GO:0016779	nucleotidyltransferase activity
molecular_function	GO:0016757	transferase activity, transferring glycosyl groups
molecular_function	GO:0003682	chromatin binding
molecular_function	GO:0010295	(+)-abscisic acid 8'-hydroxylase activity
molecular_function	GO:0015293	symporter activity

RNA-Seq Expression

Co-expression


Gene	r value	Expression
Spo23893	1.00	Barchart \| Table
Spo11392	0.78	Barchart \| Table
Spo02044	0.78	Barchart \| Table
Spo10677	0.77	Barchart \| Table
Spo01148	0.76	Barchart \| Table
Spo23078	0.76	Barchart \| Table
Spo12268	0.76	Barchart \| Table
Spo25252	0.75	Barchart \| Table
Spo01093	0.74	Barchart \| Table
Spo21382	0.74	Barchart \| Table
Spo16316	0.74	Barchart \| Table
Spo01087	0.74	Barchart \| Table
Spo20602	0.73	Barchart \| Table
Spo07109	0.73	Barchart \| Table
Spo07579	0.73	Barchart \| Table
Spo25276	0.73	Barchart \| Table
Spo08168	0.72	Barchart \| Table
Spo07301	0.72	Barchart \| Table
Spo09217	0.71	Barchart \| Table
Spo05258	0.71	Barchart \| Table
Spo21247	0.71	Barchart \| Table
Spo09412	0.71	Barchart \| Table
Spo26335	0.71	Barchart \| Table
Spo25919	0.71	Barchart \| Table
Spo12889	0.71	Barchart \| Table
Spo14346	0.71	Barchart \| Table
Spo17238	0.71	Barchart \| Table
Spo26981	0.71	Barchart \| Table
Spo13260	0.71	Barchart \| Table
Spo13615	0.70	Barchart \| Table
Spo17203	0.70	Barchart \| Table
Spo14948	0.70	Barchart \| Table
Spo15707	0.70	Barchart \| Table
Spo25444	0.70	Barchart \| Table
Spo19729	0.70	Barchart \| Table
Spo01117	0.70	Barchart \| Table
Spo01533	0.70	Barchart \| Table
Spo01693	0.70	Barchart \| Table
Spo14133	0.70	Barchart \| Table
Spo15990	0.69	Barchart \| Table
Spo13114	0.69	Barchart \| Table
Spo03899	0.69	Barchart \| Table
Spo02833	0.69	Barchart \| Table
Spo15293	0.69	Barchart \| Table
Spo15074	0.69	Barchart \| Table
Spo19487	0.69	Barchart \| Table
Spo25689	0.69	Barchart \| Table
Spo19461	0.69	Barchart \| Table
Spo22292	0.69	Barchart \| Table
Spo00529	0.69	Barchart \| Table
Spo05548	0.69	Barchart \| Table
Spo10338	0.69	Barchart \| Table
Spo25251	0.69	Barchart \| Table
Spo24381	0.68	Barchart \| Table
Spo01081	0.68	Barchart \| Table
Spo04424	0.68	Barchart \| Table
Spo06012	0.68	Barchart \| Table
Spo08341	0.68	Barchart \| Table
Spo11201	0.68	Barchart \| Table
Spo11416	0.68	Barchart \| Table
Spo11441	0.68	Barchart \| Table
Spo11878	0.68	Barchart \| Table
Spo21711	0.68	Barchart \| Table
Spo24490	0.68	Barchart \| Table
Spo25262	0.68	Barchart \| Table
Spo10219	0.67	Barchart \| Table
Spo00561	0.67	Barchart \| Table
Spo22277	0.67	Barchart \| Table
Spo14718	0.67	Barchart \| Table
Spo21035	0.67	Barchart \| Table
Spo04881	0.67	Barchart \| Table
Spo09921	0.67	Barchart \| Table
Spo28091	0.67	Barchart \| Table
Spo05898	0.67	Barchart \| Table
Spo28082	0.67	Barchart \| Table
Spo13463	0.67	Barchart \| Table
Spo15458	0.67	Barchart \| Table
Spo22545	0.66	Barchart \| Table
Spo11941	0.66	Barchart \| Table
Spo20791	0.66	Barchart \| Table
Spo21617	0.66	Barchart \| Table
Spo21669	0.66	Barchart \| Table
Spo21672	0.66	Barchart \| Table
Spo09055	0.66	Barchart \| Table
Spo18570	0.66	Barchart \| Table
Spo06719	0.66	Barchart \| Table
Spo23993	0.66	Barchart \| Table
Spo04804	0.66	Barchart \| Table
Spo03922	0.66	Barchart \| Table
Spo02775	0.66	Barchart \| Table
Spo01721	0.66	Barchart \| Table
Spo10957	0.65	Barchart \| Table
Spo12385	0.65	Barchart \| Table
Spo02017	0.65	Barchart \| Table
Spo08467	0.65	Barchart \| Table
Spo18929	0.65	Barchart \| Table
Spo09203	0.65	Barchart \| Table
Spo04391	0.65	Barchart \| Table