Spo16653 (gene) | SpinachBase

Overview


Name	Spo16653
Type	gene
Organism	Spinacia oleracea (Spinach)
Description	RNA binding protein, putative
Location	Super_scaffold_187 : 1398918 .. 1403646 (-)

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDSexonthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGATGTATGGTGCAAAGAAAAGATTCAATTAGCAACAATAATATGAATGGGCGAATATAAACGGACTTTTATTGTGTATTCACATAAATATATTAAAACAAAAGCAAGGTAAAAGTAAAATTCAAATGATACTTGGTATTAAATTATCCTATATTTAGGGAGAATTCTACCTGCATTTACTACCTCCCAATAAGAATTCTTGTGGTTAAGCCGGTCTACTCCGTAGTGGAAGTGTCAAGTGTGGTACAAGTAGGAGGAGGAGTTTGTCTGTCTGGTTTTTCGGAGTTCTTCCATATTTCCACTCCATCAGCCAACCCTCTACACTTCTCATGGAGGACATGTCAGCATACTATTATGCACCACCACCTTCACACCCCCCTCCACCACCATCCGACATTCACTCCGCCTTCTACAACACTCACTACCACCCTCCTCCTCCTCCTCCTCCTCAACATCTTCCACCACCGGTGTCTCTGCAGCACTCTCACCACATTCCTCCACCATCCCTCCACCCTCCTCCTCCTTCTTTCTCTCACCTTCTACCACCACCGCATTCTTCTCGCGACGAAGTTCGCACCCTCTTTGTTGCAGGACTTCCCGAAGATGTCAAGCCTCGCGAATTATACAACCTCTTCCGCGACTTTCCTGGCTACCTGTCTTCCAATCTTCGCTCTCCTTCCAACAATTCTCAGGTTTTTCTTTCTCTTTATCTTTTCTTTTTCGTGGTCTGAAATTTGGCGATTCAATTTTAAGCTTAACTGAGGTAATTTGGGATGAACCCTGAAATTTGTAGGGTTTTGATATTTCTCGATTAATCTCGTGATTTGTAAGTGAAAGGAATTCGATTGGGGAAAAATGGGATCACACAGATTGTTTTTTCTAGTTTACCTGGGGAATTCAATAACTGCCGCAGATAAGAATCAATTTCAACAAATCTTTTAGCATTAATTTGCAAGTTTTTAAATTGGATGAGTAGTTTTATTGAAGATTGATTTGAGAATCACTCATTAACTAAACTTGAGGTGGCTACTGGCTAGTGATGCATCATTGTTCCATCTGCAAGGAGAGTTGAACTTGAGACTGTTAGTTTCAATTTTGTCAATGAAGCTTGGCATTTGTTCCATATGACTATATGAGCTCTCTGACAATTTGTTTGTTGGTGGCAGCCATTCGCTTTCGTTGTGTTTGCTGATCAACAGTCAGCAGTCACTGCAATGCATGAAATACATGTAAGTTATTGATATGACTACTGTGCATATAGGTATCCATTTCATCTTCCAATGTTGTCAATAGAGAGAGATATTTGTTGTGAAGTGCATAGTTTTTTTTTGACACTGTGAGACAAGTGATTTGCTGCTATTACTGCTGCTTAAAATGTTTAGGAAGATGAGACACCTGCTTGAACACCATTTTTTCTTAGTATCTGCTTTATGAATTGAAATCACCAGAAAGAGGCTGGATTTAGATGTTGTTAATTGAATCATTGAATAAAGGCTTCTCATTTAATTCGCTCATCACAAATGTCCTGTTTTGTAGAGGTCGCTAGTTAAGGAAATGGAAAATAATTTTGATGCACTCGCGCGGAGTCAAGTTGCTCCCTCATCGGAATACCCATGCTGTTCTCAGTTCATAGTACTATGATCTTCACTTTCAATCATAACCATGGGTTGGAGGGAGGGTGGGAGGGGGCCCCTAAGTAAATACTTCCTCCATTCCTTAACAGTGAGTGGGTATAAGAAAAAGGTGGATACAGTACTACAGACAAAGTGTGTAAAAAGGTGGCTTGGTATAAGAAAAGATTGGATTAAGTAAGAGAGGGTGAGTGAGTGAAAATATTGTTGGAAAATATTGTTGAAAAACGGGCCAACGGGGTAAGATGATATTAAGCGTTTGCCAAAAATAGAGCAAAATAGAAATGAGTAGAACTTTATGAAATATCCCAAAACGAAAAATGAGTAGAAGTTTCATTTCTTAAGTCCCAGAATCAAATTGATCATCGATTCTAGGTCTTAACGAGCCTGAACATTAAAGAATGAAGGCTGAAGGGAGTATCTAAAAGGTGGTAGTCTATGATTATTTAACTACAGTAAGGCTTGTCTTGTTCTTGAATTTTTTTTGGTTTCCAATTATATGCATTCAAAAGCTGATAATATTTCAGACAACCATTGTAAGTGAATAATAGCCTCTGCATATTACCTCTAAGATGATATCCTAGGAACGGACGTCTACATTACATTGTTAATATGTTGTTGATTACATAAAACTATATTGAGAGATCTTTTTTCTTATTGCTTGTGTTAGGGTATGGTCTTTGATCTAGAAAAAGGATCAACCTTATACATTGATCTAGCAAAATCTAATTCACGATCTAAGCGTCAAAGGGCAGGTCGGTAGTGCTTATCTCCCTGTTTAGTTATCTTGTATTATCAAGTATTTGTCTTAAGTCGTTTGGTAAAGAATACCCTGCACCAACCCACTTTCTTAATAGTAATATTCTACTCTGTAATTGTTGGGTTTGGTGACCAGATGATGAAGGGCCTGCTGCTTCAGATAAGAAGCATAAGGGATCTCCTGCTATTCCAAGAGGTAGTGCTGAGTTGGGTAAGATGGTTATATATTACCTTTCTGTTCTTCGTATTATATTGTTGTTTGAGTTAGTAGCTTCATCCCGTGATATTGGACAGATTGCACTGTAACATTACATGGTGATAAGGAAACTAAAAAATTGCAGAAGTTATTTCCGTGGCTTTTCACATTTTTGTTTCACTATTCTCATTTCTCTCTACACAATGCTAGTTCGTCAGGAGAGCACACTTGTCTTCAAACTCACTTTGCACATGTTTTTGTCACGCTTGGGCACTAGCAGGTGTTGGCAGCTTTCACATTCCTGGGATGGGTAGTTCTGCTCACAACACAATTGGTTATCCATCTGCACAAAGGTCATTTGCACTACTGCACATCTTTATTACTTGGATCCAAATATACCTTTGGCCAACTAAGCACATTTGTGATGCTTGCCTTTGTAATTTATCTCTTTAAGTTCGGGAGTCAGTTTACTTGCTTATTTATATTTTTTTGGTTCCGGGAGTTAGAGTGCCTTGATTCCTTTTATGGGTCAACTTCTGATCCACATGCTGGTTTTCTGACCTTTGTTATCCTTCTGTCATTTAGTCATCGGAGCTATAATAGCAGAGGCATCAGTGAAGCAAATGCTGCTAAATCTGTAAGTCGGGTGCTTGGATGTTTTGCTTGCTGTAAGGTCTTGCTTCTTCTATGTTAAGCTGTTGTGGATCCATGAGGGTCTTATGTCATGTAAACTGCAATTTACCACAACATATTGTGTTTCTTTCTCCTTTTGGCCCACCCATAGTTGACGTAGTCGATACCGTATCTTAGAGATCACTATCTAAAATTATTCACTTAAGCATGAAAAAGGTTGCGATTTTTACCTTGGTCATTTGTACTAGAGGCTAAATATGTGTTTACCTTAAACTATTTTCTTTTTAAGCTTTTTTGTTTGCCTTCGTTATTACATTATAAACATTTTTTATCTGATGTGATTACCCATGTTTTCTTGTTATGAGAAAGTCTGATAACTTGTTTTTATTTATTTATTTATTATATATGTGTTTTCTTTTCTTCGTGCAGAGCCACAGTTCAGCCTCCCATATTCCACAAGAGAATCCTCCATGTCCAACAATTTTCGTGGCTAACTTAGGCCCTGAATCTTCTGAACAAGAGCTAACTAAAGTTTTTTCAAGGTCTATAGCAGCCACTGGCTTACTTTCATATAAGTTGCTACTGTTATTCTTCTCTTCCTTTTTCCCCTCCTTTTCTTTGGGTTATTATTATTGTTTTTCAGCGTTGTAAGTACGTGCATGCAACTTTCATACAGATGTCGCGGATTCTTAAAGCTAAAGATTCAAGGCACATACGGGGCTCCTGTTGCGTTTGTTGACTTCCAGGTCAGCCTGCAATCCCCCTTGGGTGTCTCATCATTTGAGAAATAGAACGAATATTTGTTAATATCCGTAAATTCCTATGTTTACTGGGGCAAGTTCATTCTGGTGCAGGATACTGCCTGCTCAAGTGAGGCTATGAGTCAACTGCAAGGCACAGTTCTTTTCTCGTCTTCATCTGGCGAAGGCTTGCGTTTGGAGTATCCTTTTGTTCTAAAAGTCTTTGCATTTTGTTTTGATTCTTAATACTTCCTTCCTTCTCTTTAGTAGCTCATGTGATGAAGAGTTGTAATTAGAAGAGTACAAAGGAAGTATATACAACAATACAAGTGTTTTTATAGTTCCCTCAGCTATTTTTTTTTGGTTTTCTTGACAAAATCCAGATATGCTAAATCAAGGATGGGGATGCGAAGAAAGCCCAAGTAGGTTGAAGTTGAGTAAAACACCAAGATGTTTGATAGCACTATTGTGTTTGTACTCTGTAGTTGTGTTCATCCTAGAAAATTTTGGGTGTCCATGAGCATTTCTGGTGGTTTATTTGATAATCTTGTTTCAGAGTCCTTTGAAAACTTATGTTGGTGGATAACCTCTATGTAATAGACTTTTAGTGGAGAAACTTCCGAATCAATAAAAAAGTTCTTATCTGATTTGTCATTTGTGGTTAAAACTGGAGTGTTAGATTTTTACAGTTTGTCAACATATGTCCATATGGGTAAGATCTACTAGGTGGAATCAGAATAAGAACAAATTGGAAAACGATCAACTATCC

mRNA sequence

ATGATGAGGAGGAGTTTGTCTGTCTGGTTTTTCGGAGTTCTTCCATATTTCCACTCCATCAGCCAACCCTCTACACTTCTCATGGAGGACATGTCAGCATACTATTATGCACCACCACCTTCACACCCCCCTCCACCACCATCCGACATTCACTCCGCCTTCTACAACACTCACTACCACCCTCCTCCTCCTCCTCCTCCTCAACATCTTCCACCACCGGTGTCTCTGCAGCACTCTCACCACATTCCTCCACCATCCCTCCACCCTCCTCCTCCTTCTTTCTCTCACCTTCTACCACCACCGCATTCTTCTCGCGACGAAGTTCGCACCCTCTTTGTTGCAGGACTTCCCGAAGATGTCAAGCCTCGCGAATTATACAACCTCTTCCGCGACTTTCCTGGCTACCTGTCTTCCAATCTTCGCTCTCCTTCCAACAATTCTCAGCCATTCGCTTTCGTTGTGTTTGCTGATCAACAGTCAGCAGTCACTGCAATGCATGAAATACATGGTATGGTCTTTGATCTAGAAAAAGGATCAACCTTATACATTGATCTAGCAAAATCTAATTCACGATCTAAGCGTCAAAGGGCAGATGATGAAGGGCCTGCTGCTTCAGATAAGAAGCATAAGGGATCTCCTGCTATTCCAAGAGGTAGTGCTGAGTTGGCAGGTGTTGGCAGCTTTCACATTCCTGGGATGGGTAGTTCTGCTCACAACACAATTGGTTATCCATCTGCACAAAGTCATCGGAGCTATAATAGCAGAGGCATCAGTGAAGCAAATGCTGCTAAATCTAGCCACAGTTCAGCCTCCCATATTCCACAAGAGAATCCTCCATGTCCAACAATTTTCGTGGCTAACTTAGGCCCTGAATCTTCTGAACAAGAGCTAACTAAAGTTTTTTCAAGATGTCGCGGATTCTTAAAGCTAAAGATTCAAGGCACATACGGGGCTCCTGTTGCGTTTGTTGACTTCCAGGATACTGCCTGCTCAAGTGAGGCTATGAGTCAACTGCAAGGCACAGTTCTTTTCTCGTCTTCATCTGGCGAAGGCTTGCGTTTGGAATATGCTAAATCAAGGATGGGGATGCGAAGAAAGCCCAAGTAGGTTGAAGTTGAGTAAAACACCAAGATGTTTGATAGCACTATTGTGTTTGTACTCTGTAGTTGTGTTCATCCTAGAAAATTTTGGGTGTCCATGAGCATTTCTGGTGGTTTATTTGATAATCTTGTTTCAGAGTCCTTTGAAAACTTATGTTGGTGGATAACCTCTATGTAATAGACTTTTAGTGGAGAAACTTCCGAATCAATAAAAAAGTTCTTATCTGATTTGTCATTTGTGGTTAAAACTGGAGTGTTAGATTTTTACAGTTTGTCAACATATGTCCATATGGGTAAGATCTACTAGGTGGAATCAGAATAAGAACAAATTGGAAAACGATCAACTATCC

Coding sequence (CDS)

ATGATGAGGAGGAGTTTGTCTGTCTGGTTTTTCGGAGTTCTTCCATATTTCCACTCCATCAGCCAACCCTCTACACTTCTCATGGAGGACATGTCAGCATACTATTATGCACCACCACCTTCACACCCCCCTCCACCACCATCCGACATTCACTCCGCCTTCTACAACACTCACTACCACCCTCCTCCTCCTCCTCCTCCTCAACATCTTCCACCACCGGTGTCTCTGCAGCACTCTCACCACATTCCTCCACCATCCCTCCACCCTCCTCCTCCTTCTTTCTCTCACCTTCTACCACCACCGCATTCTTCTCGCGACGAAGTTCGCACCCTCTTTGTTGCAGGACTTCCCGAAGATGTCAAGCCTCGCGAATTATACAACCTCTTCCGCGACTTTCCTGGCTACCTGTCTTCCAATCTTCGCTCTCCTTCCAACAATTCTCAGCCATTCGCTTTCGTTGTGTTTGCTGATCAACAGTCAGCAGTCACTGCAATGCATGAAATACATGGTATGGTCTTTGATCTAGAAAAAGGATCAACCTTATACATTGATCTAGCAAAATCTAATTCACGATCTAAGCGTCAAAGGGCAGATGATGAAGGGCCTGCTGCTTCAGATAAGAAGCATAAGGGATCTCCTGCTATTCCAAGAGGTAGTGCTGAGTTGGCAGGTGTTGGCAGCTTTCACATTCCTGGGATGGGTAGTTCTGCTCACAACACAATTGGTTATCCATCTGCACAAAGTCATCGGAGCTATAATAGCAGAGGCATCAGTGAAGCAAATGCTGCTAAATCTAGCCACAGTTCAGCCTCCCATATTCCACAAGAGAATCCTCCATGTCCAACAATTTTCGTGGCTAACTTAGGCCCTGAATCTTCTGAACAAGAGCTAACTAAAGTTTTTTCAAGATGTCGCGGATTCTTAAAGCTAAAGATTCAAGGCACATACGGGGCTCCTGTTGCGTTTGTTGACTTCCAGGATACTGCCTGCTCAAGTGAGGCTATGAGTCAACTGCAAGGCACAGTTCTTTTCTCGTCTTCATCTGGCGAAGGCTTGCGTTTGGAATATGCTAAATCAAGGATGGGGATGCGAAGAAAGCCCAAGTAG

Protein sequence

MMRRSLSVWFFGVLPYFHSISQPSTLLMEDMSAYYYAPPPSHPPPPPSDIHSAFYNTHYHPPPPPPPQHLPPPVSLQHSHHIPPPSLHPPPPSFSHLLPPPHSSRDEVRTLFVAGLPEDVKPRELYNLFRDFPGYLSSNLRSPSNNSQPFAFVVFADQQSAVTAMHEIHGMVFDLEKGSTLYIDLAKSNSRSKRQRADDEGPAASDKKHKGSPAIPRGSAELAGVGSFHIPGMGSSAHNTIGYPSAQSHRSYNSRGISEANAAKSSHSSASHIPQENPPCPTIFVANLGPESSEQELTKVFSRCRGFLKLKIQGTYGAPVAFVDFQDTACSSEAMSQLQGTVLFSSSSGEGLRLEYAKSRMGMRRKPK

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Spo16653.1	Spo16653.1	mRNA

Homology

[Close]

BLAST of Spo16653.1 vs. NCBI nr
Match: gi|902103180|gb|KNA03590.1| (hypothetical protein SOVF_207650 isoform B, partial [Spinacia oleracea])

HSP 1 Score: 722.2 bits (1863), Expect = 4.500e-205
Identity = 366/366 (100.00%), Postives = 366/366 (100.00%), Query Frame = 1


		  
Query: 3   RRSLSVWFFGVLPYFHSISQPSTLLMEDMSAYYYAPPPSHPPPPPSDIHSAFYNTHYHPP 62
           RRSLSVWFFGVLPYFHSISQPSTLLMEDMSAYYYAPPPSHPPPPPSDIHSAFYNTHYHPP
Sbjct: 15  RRSLSVWFFGVLPYFHSISQPSTLLMEDMSAYYYAPPPSHPPPPPSDIHSAFYNTHYHPP 74

Query: 63  PPPPPQHLPPPVSLQHSHHIPPPSLHPPPPSFSHLLPPPHSSRDEVRTLFVAGLPEDVKP 122
           PPPPPQHLPPPVSLQHSHHIPPPSLHPPPPSFSHLLPPPHSSRDEVRTLFVAGLPEDVKP
Sbjct: 75  PPPPPQHLPPPVSLQHSHHIPPPSLHPPPPSFSHLLPPPHSSRDEVRTLFVAGLPEDVKP 134

Query: 123 RELYNLFRDFPGYLSSNLRSPSNNSQPFAFVVFADQQSAVTAMHEIHGMVFDLEKGSTLY 182
           RELYNLFRDFPGYLSSNLRSPSNNSQPFAFVVFADQQSAVTAMHEIHGMVFDLEKGSTLY
Sbjct: 135 RELYNLFRDFPGYLSSNLRSPSNNSQPFAFVVFADQQSAVTAMHEIHGMVFDLEKGSTLY 194

Query: 183 IDLAKSNSRSKRQRADDEGPAASDKKHKGSPAIPRGSAELAGVGSFHIPGMGSSAHNTIG 242
           IDLAKSNSRSKRQRADDEGPAASDKKHKGSPAIPRGSAELAGVGSFHIPGMGSSAHNTIG
Sbjct: 195 IDLAKSNSRSKRQRADDEGPAASDKKHKGSPAIPRGSAELAGVGSFHIPGMGSSAHNTIG 254

Query: 243 YPSAQSHRSYNSRGISEANAAKSSHSSASHIPQENPPCPTIFVANLGPESSEQELTKVFS 302
           YPSAQSHRSYNSRGISEANAAKSSHSSASHIPQENPPCPTIFVANLGPESSEQELTKVFS
Sbjct: 255 YPSAQSHRSYNSRGISEANAAKSSHSSASHIPQENPPCPTIFVANLGPESSEQELTKVFS 314

Query: 303 RCRGFLKLKIQGTYGAPVAFVDFQDTACSSEAMSQLQGTVLFSSSSGEGLRLEYAKSRMG 362
           RCRGFLKLKIQGTYGAPVAFVDFQDTACSSEAMSQLQGTVLFSSSSGEGLRLEYAKSRMG
Sbjct: 315 RCRGFLKLKIQGTYGAPVAFVDFQDTACSSEAMSQLQGTVLFSSSSGEGLRLEYAKSRMG 374

Query: 363 MRRKPK 369
           MRRKPK
Sbjct: 375 MRRKPK 380

[Close]

BLAST of Spo16653.1 vs. NCBI nr
Match: gi|902103179|gb|KNA03589.1| (hypothetical protein SOVF_207650 isoform A, partial [Spinacia oleracea])

HSP 1 Score: 716.5 bits (1848), Expect = 2.400e-203
Identity = 365/366 (99.73%), Postives = 365/366 (99.73%), Query Frame = 1


		  
Query: 3   RRSLSVWFFGVLPYFHSISQPSTLLMEDMSAYYYAPPPSHPPPPPSDIHSAFYNTHYHPP 62
           RRSLSVWFFGVLPYFHSISQPSTLLMEDMSAYYYAPPPSHPPPPPSDIHSAFYNTHYHPP
Sbjct: 15  RRSLSVWFFGVLPYFHSISQPSTLLMEDMSAYYYAPPPSHPPPPPSDIHSAFYNTHYHPP 74

Query: 63  PPPPPQHLPPPVSLQHSHHIPPPSLHPPPPSFSHLLPPPHSSRDEVRTLFVAGLPEDVKP 122
           PPPPPQHLPPPVSLQHSHHIPPPSLHPPPPSFSHLLPPPHSSRDEVRTLFVAGLPEDVKP
Sbjct: 75  PPPPPQHLPPPVSLQHSHHIPPPSLHPPPPSFSHLLPPPHSSRDEVRTLFVAGLPEDVKP 134

Query: 123 RELYNLFRDFPGYLSSNLRSPSNNSQPFAFVVFADQQSAVTAMHEIHGMVFDLEKGSTLY 182
           RELYNLFRDFPGYLSSNLRSPSNNSQPFAFVVFADQQSAVTAMHEIHGMVFDLEKGSTLY
Sbjct: 135 RELYNLFRDFPGYLSSNLRSPSNNSQPFAFVVFADQQSAVTAMHEIHGMVFDLEKGSTLY 194

Query: 183 IDLAKSNSRSKRQRADDEGPAASDKKHKGSPAIPRGSAELAGVGSFHIPGMGSSAHNTIG 242
           IDLAKSNSRSKRQRADDEGPAASDKKHKGSPAIPRGSAEL GVGSFHIPGMGSSAHNTIG
Sbjct: 195 IDLAKSNSRSKRQRADDEGPAASDKKHKGSPAIPRGSAEL-GVGSFHIPGMGSSAHNTIG 254

Query: 243 YPSAQSHRSYNSRGISEANAAKSSHSSASHIPQENPPCPTIFVANLGPESSEQELTKVFS 302
           YPSAQSHRSYNSRGISEANAAKSSHSSASHIPQENPPCPTIFVANLGPESSEQELTKVFS
Sbjct: 255 YPSAQSHRSYNSRGISEANAAKSSHSSASHIPQENPPCPTIFVANLGPESSEQELTKVFS 314

Query: 303 RCRGFLKLKIQGTYGAPVAFVDFQDTACSSEAMSQLQGTVLFSSSSGEGLRLEYAKSRMG 362
           RCRGFLKLKIQGTYGAPVAFVDFQDTACSSEAMSQLQGTVLFSSSSGEGLRLEYAKSRMG
Sbjct: 315 RCRGFLKLKIQGTYGAPVAFVDFQDTACSSEAMSQLQGTVLFSSSSGEGLRLEYAKSRMG 374

Query: 363 MRRKPK 369
           MRRKPK
Sbjct: 375 MRRKPK 379

[Close]

BLAST of Spo16653.1 vs. NCBI nr
Match: gi|902103181|gb|KNA03591.1| (hypothetical protein SOVF_207650 isoform C, partial [Spinacia oleracea])

HSP 1 Score: 705.7 bits (1820), Expect = 4.300e-200
Identity = 360/366 (98.36%), Postives = 360/366 (98.36%), Query Frame = 1


		  
Query: 3   RRSLSVWFFGVLPYFHSISQPSTLLMEDMSAYYYAPPPSHPPPPPSDIHSAFYNTHYHPP 62
           RRSLSVWFFGVLPYFHSISQPSTLLMEDMSAYYYAPPPSHPPPPPSDIHSAFYNTHYHPP
Sbjct: 15  RRSLSVWFFGVLPYFHSISQPSTLLMEDMSAYYYAPPPSHPPPPPSDIHSAFYNTHYHPP 74

Query: 63  PPPPPQHLPPPVSLQHSHHIPPPSLHPPPPSFSHLLPPPHSSRDEVRTLFVAGLPEDVKP 122
           PPPPPQHLPPPVSLQHSHHIPPPSLHPPPPSFSHLLPPPHSSRDEVRTLFVAGLPEDVKP
Sbjct: 75  PPPPPQHLPPPVSLQHSHHIPPPSLHPPPPSFSHLLPPPHSSRDEVRTLFVAGLPEDVKP 134

Query: 123 RELYNLFRDFPGYLSSNLRSPSNNSQPFAFVVFADQQSAVTAMHEIHGMVFDLEKGSTLY 182
           RELYNLFRDFPGYLSSNLRSPSNNSQPFAFVVFADQQSAVTAMHEIHGMVFDLEKGSTLY
Sbjct: 135 RELYNLFRDFPGYLSSNLRSPSNNSQPFAFVVFADQQSAVTAMHEIHGMVFDLEKGSTLY 194

Query: 183 IDLAKSNSRSKRQRADDEGPAASDKKHKGSPAIPRGSAELAGVGSFHIPGMGSSAHNTIG 242
           IDLAKSNSRSKRQRADDEGPAASDKKHKGSPAIPR      GVGSFHIPGMGSSAHNTIG
Sbjct: 195 IDLAKSNSRSKRQRADDEGPAASDKKHKGSPAIPR------GVGSFHIPGMGSSAHNTIG 254

Query: 243 YPSAQSHRSYNSRGISEANAAKSSHSSASHIPQENPPCPTIFVANLGPESSEQELTKVFS 302
           YPSAQSHRSYNSRGISEANAAKSSHSSASHIPQENPPCPTIFVANLGPESSEQELTKVFS
Sbjct: 255 YPSAQSHRSYNSRGISEANAAKSSHSSASHIPQENPPCPTIFVANLGPESSEQELTKVFS 314

Query: 303 RCRGFLKLKIQGTYGAPVAFVDFQDTACSSEAMSQLQGTVLFSSSSGEGLRLEYAKSRMG 362
           RCRGFLKLKIQGTYGAPVAFVDFQDTACSSEAMSQLQGTVLFSSSSGEGLRLEYAKSRMG
Sbjct: 315 RCRGFLKLKIQGTYGAPVAFVDFQDTACSSEAMSQLQGTVLFSSSSGEGLRLEYAKSRMG 374

Query: 363 MRRKPK 369
           MRRKPK
Sbjct: 375 MRRKPK 374

[Close]

BLAST of Spo16653.1 vs. NCBI nr
Match: gi|731336926|ref|XP_010679518.1| (PREDICTED: RNA-binding protein with multiple splicing 2 isoform X1 [Beta vulgaris subsp. vulgaris])

HSP 1 Score: 461.1 bits (1185), Expect = 1.900e-126
Identity = 251/341 (73.61%), Postives = 272/341 (79.77%), Query Frame = 1


		  
Query: 28  MEDMSAYYYAPPPSHPPPPPSDIHSAFYNTHYHPPPPPPPQHLPPPVSLQHSHHIPPPSL 87
           MED++AYY APPP    PP SDI S FYNTHYH PPPPP           HS H+  P  
Sbjct: 1   MEDITAYYGAPPP----PPQSDIPS-FYNTHYHHPPPPP-----------HSPHLQSP-- 60

Query: 88  HPPPPSFSHLLPPPHSSRDEVRTLFVAGLPEDVKPRELYNLFRDFPGYLSSNLRSPSNNS 147
                             DEVRTLFVAGLPEDVKPRE+YNLFRDFPGYLSSNLRSPS +S
Sbjct: 61  ------------------DEVRTLFVAGLPEDVKPREVYNLFRDFPGYLSSNLRSPSKSS 120

Query: 148 QPFAFVVFADQQSAVTAMHEIHGMVFDLEKGSTLYIDLAKSNSRSKRQRADDEGPAASDK 207
           QPFAF  F DQ SA+TAMH ++GM+FDLEKGSTLYIDLAKSNSRSKRQRADD GP  SDK
Sbjct: 121 QPFAFAEFLDQHSAITAMHALNGMIFDLEKGSTLYIDLAKSNSRSKRQRADDSGPV-SDK 180

Query: 208 KHKGSPAIPRGSAELAGVGSFHIPGMGSSAHNTIGYPSAQSHRSYNSRGISEANAAKSSH 267
           KHKGSPA  RGS ELAG+GSFHIPGMG+SA+NTIGYPSAQSH SY SRG SEANA KSSH
Sbjct: 181 KHKGSPAFARGSVELAGIGSFHIPGMGNSAYNTIGYPSAQSHWSYTSRGTSEANAPKSSH 240

Query: 268 SSASHIPQENPPCPTIFVANLGPESSEQELTKVFSRCRGFLKLKIQGTYGAPVAFVDFQD 327
           SSASH+PQ+NPPCPTIFVANL P+ SEQEL +VFSR RGFLKLKIQ TYGAPVAFVDFQD
Sbjct: 241 SSASHVPQDNPPCPTIFVANLSPKCSEQELIQVFSRYRGFLKLKIQSTYGAPVAFVDFQD 300

Query: 328 TACSSEAMSQLQGTVLFSSSSGEGLRLEYAKSRMGMRRKPK 369
           TACS+EA+ QLQGTVLFS  +G+G+RLEYAKSRMG RRK K
Sbjct: 301 TACSTEALGQLQGTVLFSDPAGDGMRLEYAKSRMGKRRKTK 304

[Close]

BLAST of Spo16653.1 vs. NCBI nr
Match: gi|731336928|ref|XP_010679519.1| (PREDICTED: RNA-binding protein with multiple splicing 2 isoform X2 [Beta vulgaris subsp. vulgaris])

HSP 1 Score: 455.3 bits (1170), Expect = 1.000e-124
Identity = 250/341 (73.31%), Postives = 271/341 (79.47%), Query Frame = 1


		  
Query: 28  MEDMSAYYYAPPPSHPPPPPSDIHSAFYNTHYHPPPPPPPQHLPPPVSLQHSHHIPPPSL 87
           MED++AYY APPP    PP SDI S FYNTHYH PPPPP           HS H+  P  
Sbjct: 1   MEDITAYYGAPPP----PPQSDIPS-FYNTHYHHPPPPP-----------HSPHLQSP-- 60

Query: 88  HPPPPSFSHLLPPPHSSRDEVRTLFVAGLPEDVKPRELYNLFRDFPGYLSSNLRSPSNNS 147
                             DEVRTLFVAGLPEDVKPRE+YNLFRDFPGYLSSNLRSPS +S
Sbjct: 61  ------------------DEVRTLFVAGLPEDVKPREVYNLFRDFPGYLSSNLRSPSKSS 120

Query: 148 QPFAFVVFADQQSAVTAMHEIHGMVFDLEKGSTLYIDLAKSNSRSKRQRADDEGPAASDK 207
           QPFAF  F DQ SA+TAMH ++GM+FDLEKGSTLYIDLAKSNSRSKRQRADD GP  SDK
Sbjct: 121 QPFAFAEFLDQHSAITAMHALNGMIFDLEKGSTLYIDLAKSNSRSKRQRADDSGPV-SDK 180

Query: 208 KHKGSPAIPRGSAELAGVGSFHIPGMGSSAHNTIGYPSAQSHRSYNSRGISEANAAKSSH 267
           KHKGSPA  RGS EL G+GSFHIPGMG+SA+NTIGYPSAQSH SY SRG SEANA KSSH
Sbjct: 181 KHKGSPAFARGSVEL-GIGSFHIPGMGNSAYNTIGYPSAQSHWSYTSRGTSEANAPKSSH 240

Query: 268 SSASHIPQENPPCPTIFVANLGPESSEQELTKVFSRCRGFLKLKIQGTYGAPVAFVDFQD 327
           SSASH+PQ+NPPCPTIFVANL P+ SEQEL +VFSR RGFLKLKIQ TYGAPVAFVDFQD
Sbjct: 241 SSASHVPQDNPPCPTIFVANLSPKCSEQELIQVFSRYRGFLKLKIQSTYGAPVAFVDFQD 300

Query: 328 TACSSEAMSQLQGTVLFSSSSGEGLRLEYAKSRMGMRRKPK 369
           TACS+EA+ QLQGTVLFS  +G+G+RLEYAKSRMG RRK K
Sbjct: 301 TACSTEALGQLQGTVLFSDPAGDGMRLEYAKSRMGKRRKTK 303

[Close]

BLAST of Spo16653.1 vs. UniProtKB/TrEMBL
Match: A0A0K9Q8J6_SPIOL (Uncharacterized protein (Fragment) OS=Spinacia oleracea GN=SOVF_207650 PE=4 SV=1)

HSP 1 Score: 722.2 bits (1863), Expect = 3.100e-205
Identity = 366/366 (100.00%), Postives = 366/366 (100.00%), Query Frame = 1


		  
Query: 3   RRSLSVWFFGVLPYFHSISQPSTLLMEDMSAYYYAPPPSHPPPPPSDIHSAFYNTHYHPP 62
           RRSLSVWFFGVLPYFHSISQPSTLLMEDMSAYYYAPPPSHPPPPPSDIHSAFYNTHYHPP
Sbjct: 15  RRSLSVWFFGVLPYFHSISQPSTLLMEDMSAYYYAPPPSHPPPPPSDIHSAFYNTHYHPP 74

Query: 63  PPPPPQHLPPPVSLQHSHHIPPPSLHPPPPSFSHLLPPPHSSRDEVRTLFVAGLPEDVKP 122
           PPPPPQHLPPPVSLQHSHHIPPPSLHPPPPSFSHLLPPPHSSRDEVRTLFVAGLPEDVKP
Sbjct: 75  PPPPPQHLPPPVSLQHSHHIPPPSLHPPPPSFSHLLPPPHSSRDEVRTLFVAGLPEDVKP 134

Query: 123 RELYNLFRDFPGYLSSNLRSPSNNSQPFAFVVFADQQSAVTAMHEIHGMVFDLEKGSTLY 182
           RELYNLFRDFPGYLSSNLRSPSNNSQPFAFVVFADQQSAVTAMHEIHGMVFDLEKGSTLY
Sbjct: 135 RELYNLFRDFPGYLSSNLRSPSNNSQPFAFVVFADQQSAVTAMHEIHGMVFDLEKGSTLY 194

Query: 183 IDLAKSNSRSKRQRADDEGPAASDKKHKGSPAIPRGSAELAGVGSFHIPGMGSSAHNTIG 242
           IDLAKSNSRSKRQRADDEGPAASDKKHKGSPAIPRGSAELAGVGSFHIPGMGSSAHNTIG
Sbjct: 195 IDLAKSNSRSKRQRADDEGPAASDKKHKGSPAIPRGSAELAGVGSFHIPGMGSSAHNTIG 254

Query: 243 YPSAQSHRSYNSRGISEANAAKSSHSSASHIPQENPPCPTIFVANLGPESSEQELTKVFS 302
           YPSAQSHRSYNSRGISEANAAKSSHSSASHIPQENPPCPTIFVANLGPESSEQELTKVFS
Sbjct: 255 YPSAQSHRSYNSRGISEANAAKSSHSSASHIPQENPPCPTIFVANLGPESSEQELTKVFS 314

Query: 303 RCRGFLKLKIQGTYGAPVAFVDFQDTACSSEAMSQLQGTVLFSSSSGEGLRLEYAKSRMG 362
           RCRGFLKLKIQGTYGAPVAFVDFQDTACSSEAMSQLQGTVLFSSSSGEGLRLEYAKSRMG
Sbjct: 315 RCRGFLKLKIQGTYGAPVAFVDFQDTACSSEAMSQLQGTVLFSSSSGEGLRLEYAKSRMG 374

Query: 363 MRRKPK 369
           MRRKPK
Sbjct: 375 MRRKPK 380

[Close]

BLAST of Spo16653.1 vs. UniProtKB/TrEMBL
Match: A0A0K9Q8K9_SPIOL (Uncharacterized protein (Fragment) OS=Spinacia oleracea GN=SOVF_207650 PE=4 SV=1)

HSP 1 Score: 716.5 bits (1848), Expect = 1.700e-203
Identity = 365/366 (99.73%), Postives = 365/366 (99.73%), Query Frame = 1


		  
Query: 3   RRSLSVWFFGVLPYFHSISQPSTLLMEDMSAYYYAPPPSHPPPPPSDIHSAFYNTHYHPP 62
           RRSLSVWFFGVLPYFHSISQPSTLLMEDMSAYYYAPPPSHPPPPPSDIHSAFYNTHYHPP
Sbjct: 15  RRSLSVWFFGVLPYFHSISQPSTLLMEDMSAYYYAPPPSHPPPPPSDIHSAFYNTHYHPP 74

Query: 63  PPPPPQHLPPPVSLQHSHHIPPPSLHPPPPSFSHLLPPPHSSRDEVRTLFVAGLPEDVKP 122
           PPPPPQHLPPPVSLQHSHHIPPPSLHPPPPSFSHLLPPPHSSRDEVRTLFVAGLPEDVKP
Sbjct: 75  PPPPPQHLPPPVSLQHSHHIPPPSLHPPPPSFSHLLPPPHSSRDEVRTLFVAGLPEDVKP 134

Query: 123 RELYNLFRDFPGYLSSNLRSPSNNSQPFAFVVFADQQSAVTAMHEIHGMVFDLEKGSTLY 182
           RELYNLFRDFPGYLSSNLRSPSNNSQPFAFVVFADQQSAVTAMHEIHGMVFDLEKGSTLY
Sbjct: 135 RELYNLFRDFPGYLSSNLRSPSNNSQPFAFVVFADQQSAVTAMHEIHGMVFDLEKGSTLY 194

Query: 183 IDLAKSNSRSKRQRADDEGPAASDKKHKGSPAIPRGSAELAGVGSFHIPGMGSSAHNTIG 242
           IDLAKSNSRSKRQRADDEGPAASDKKHKGSPAIPRGSAEL GVGSFHIPGMGSSAHNTIG
Sbjct: 195 IDLAKSNSRSKRQRADDEGPAASDKKHKGSPAIPRGSAEL-GVGSFHIPGMGSSAHNTIG 254

Query: 243 YPSAQSHRSYNSRGISEANAAKSSHSSASHIPQENPPCPTIFVANLGPESSEQELTKVFS 302
           YPSAQSHRSYNSRGISEANAAKSSHSSASHIPQENPPCPTIFVANLGPESSEQELTKVFS
Sbjct: 255 YPSAQSHRSYNSRGISEANAAKSSHSSASHIPQENPPCPTIFVANLGPESSEQELTKVFS 314

Query: 303 RCRGFLKLKIQGTYGAPVAFVDFQDTACSSEAMSQLQGTVLFSSSSGEGLRLEYAKSRMG 362
           RCRGFLKLKIQGTYGAPVAFVDFQDTACSSEAMSQLQGTVLFSSSSGEGLRLEYAKSRMG
Sbjct: 315 RCRGFLKLKIQGTYGAPVAFVDFQDTACSSEAMSQLQGTVLFSSSSGEGLRLEYAKSRMG 374

Query: 363 MRRKPK 369
           MRRKPK
Sbjct: 375 MRRKPK 379

[Close]

BLAST of Spo16653.1 vs. UniProtKB/TrEMBL
Match: A0A0K9QAP5_SPIOL (Uncharacterized protein (Fragment) OS=Spinacia oleracea GN=SOVF_207650 PE=4 SV=1)

HSP 1 Score: 705.7 bits (1820), Expect = 3.000e-200
Identity = 360/366 (98.36%), Postives = 360/366 (98.36%), Query Frame = 1


		  
Query: 3   RRSLSVWFFGVLPYFHSISQPSTLLMEDMSAYYYAPPPSHPPPPPSDIHSAFYNTHYHPP 62
           RRSLSVWFFGVLPYFHSISQPSTLLMEDMSAYYYAPPPSHPPPPPSDIHSAFYNTHYHPP
Sbjct: 15  RRSLSVWFFGVLPYFHSISQPSTLLMEDMSAYYYAPPPSHPPPPPSDIHSAFYNTHYHPP 74

Query: 63  PPPPPQHLPPPVSLQHSHHIPPPSLHPPPPSFSHLLPPPHSSRDEVRTLFVAGLPEDVKP 122
           PPPPPQHLPPPVSLQHSHHIPPPSLHPPPPSFSHLLPPPHSSRDEVRTLFVAGLPEDVKP
Sbjct: 75  PPPPPQHLPPPVSLQHSHHIPPPSLHPPPPSFSHLLPPPHSSRDEVRTLFVAGLPEDVKP 134

Query: 123 RELYNLFRDFPGYLSSNLRSPSNNSQPFAFVVFADQQSAVTAMHEIHGMVFDLEKGSTLY 182
           RELYNLFRDFPGYLSSNLRSPSNNSQPFAFVVFADQQSAVTAMHEIHGMVFDLEKGSTLY
Sbjct: 135 RELYNLFRDFPGYLSSNLRSPSNNSQPFAFVVFADQQSAVTAMHEIHGMVFDLEKGSTLY 194

Query: 183 IDLAKSNSRSKRQRADDEGPAASDKKHKGSPAIPRGSAELAGVGSFHIPGMGSSAHNTIG 242
           IDLAKSNSRSKRQRADDEGPAASDKKHKGSPAIPR      GVGSFHIPGMGSSAHNTIG
Sbjct: 195 IDLAKSNSRSKRQRADDEGPAASDKKHKGSPAIPR------GVGSFHIPGMGSSAHNTIG 254

Query: 243 YPSAQSHRSYNSRGISEANAAKSSHSSASHIPQENPPCPTIFVANLGPESSEQELTKVFS 302
           YPSAQSHRSYNSRGISEANAAKSSHSSASHIPQENPPCPTIFVANLGPESSEQELTKVFS
Sbjct: 255 YPSAQSHRSYNSRGISEANAAKSSHSSASHIPQENPPCPTIFVANLGPESSEQELTKVFS 314

Query: 303 RCRGFLKLKIQGTYGAPVAFVDFQDTACSSEAMSQLQGTVLFSSSSGEGLRLEYAKSRMG 362
           RCRGFLKLKIQGTYGAPVAFVDFQDTACSSEAMSQLQGTVLFSSSSGEGLRLEYAKSRMG
Sbjct: 315 RCRGFLKLKIQGTYGAPVAFVDFQDTACSSEAMSQLQGTVLFSSSSGEGLRLEYAKSRMG 374

Query: 363 MRRKPK 369
           MRRKPK
Sbjct: 375 MRRKPK 374

[Close]

BLAST of Spo16653.1 vs. UniProtKB/TrEMBL
Match: A0A0J8C831_BETVU (Uncharacterized protein OS=Beta vulgaris subsp. vulgaris GN=BVRB_6g127240 PE=4 SV=1)

HSP 1 Score: 461.1 bits (1185), Expect = 1.300e-126
Identity = 251/341 (73.61%), Postives = 272/341 (79.77%), Query Frame = 1


		  
Query: 28  MEDMSAYYYAPPPSHPPPPPSDIHSAFYNTHYHPPPPPPPQHLPPPVSLQHSHHIPPPSL 87
           MED++AYY APPP    PP SDI S FYNTHYH PPPPP           HS H+  P  
Sbjct: 1   MEDITAYYGAPPP----PPQSDIPS-FYNTHYHHPPPPP-----------HSPHLQSP-- 60

Query: 88  HPPPPSFSHLLPPPHSSRDEVRTLFVAGLPEDVKPRELYNLFRDFPGYLSSNLRSPSNNS 147
                             DEVRTLFVAGLPEDVKPRE+YNLFRDFPGYLSSNLRSPS +S
Sbjct: 61  ------------------DEVRTLFVAGLPEDVKPREVYNLFRDFPGYLSSNLRSPSKSS 120

Query: 148 QPFAFVVFADQQSAVTAMHEIHGMVFDLEKGSTLYIDLAKSNSRSKRQRADDEGPAASDK 207
           QPFAF  F DQ SA+TAMH ++GM+FDLEKGSTLYIDLAKSNSRSKRQRADD GP  SDK
Sbjct: 121 QPFAFAEFLDQHSAITAMHALNGMIFDLEKGSTLYIDLAKSNSRSKRQRADDSGPV-SDK 180

Query: 208 KHKGSPAIPRGSAELAGVGSFHIPGMGSSAHNTIGYPSAQSHRSYNSRGISEANAAKSSH 267
           KHKGSPA  RGS ELAG+GSFHIPGMG+SA+NTIGYPSAQSH SY SRG SEANA KSSH
Sbjct: 181 KHKGSPAFARGSVELAGIGSFHIPGMGNSAYNTIGYPSAQSHWSYTSRGTSEANAPKSSH 240

Query: 268 SSASHIPQENPPCPTIFVANLGPESSEQELTKVFSRCRGFLKLKIQGTYGAPVAFVDFQD 327
           SSASH+PQ+NPPCPTIFVANL P+ SEQEL +VFSR RGFLKLKIQ TYGAPVAFVDFQD
Sbjct: 241 SSASHVPQDNPPCPTIFVANLSPKCSEQELIQVFSRYRGFLKLKIQSTYGAPVAFVDFQD 300

Query: 328 TACSSEAMSQLQGTVLFSSSSGEGLRLEYAKSRMGMRRKPK 369
           TACS+EA+ QLQGTVLFS  +G+G+RLEYAKSRMG RRK K
Sbjct: 301 TACSTEALGQLQGTVLFSDPAGDGMRLEYAKSRMGKRRKTK 304

[Close]

BLAST of Spo16653.1 vs. UniProtKB/TrEMBL
Match: A0A0J8F249_BETVU (Uncharacterized protein OS=Beta vulgaris subsp. vulgaris GN=BVRB_6g127240 PE=4 SV=1)

HSP 1 Score: 455.3 bits (1170), Expect = 7.100e-125
Identity = 250/341 (73.31%), Postives = 271/341 (79.47%), Query Frame = 1


		  
Query: 28  MEDMSAYYYAPPPSHPPPPPSDIHSAFYNTHYHPPPPPPPQHLPPPVSLQHSHHIPPPSL 87
           MED++AYY APPP    PP SDI S FYNTHYH PPPPP           HS H+  P  
Sbjct: 1   MEDITAYYGAPPP----PPQSDIPS-FYNTHYHHPPPPP-----------HSPHLQSP-- 60

Query: 88  HPPPPSFSHLLPPPHSSRDEVRTLFVAGLPEDVKPRELYNLFRDFPGYLSSNLRSPSNNS 147
                             DEVRTLFVAGLPEDVKPRE+YNLFRDFPGYLSSNLRSPS +S
Sbjct: 61  ------------------DEVRTLFVAGLPEDVKPREVYNLFRDFPGYLSSNLRSPSKSS 120

Query: 148 QPFAFVVFADQQSAVTAMHEIHGMVFDLEKGSTLYIDLAKSNSRSKRQRADDEGPAASDK 207
           QPFAF  F DQ SA+TAMH ++GM+FDLEKGSTLYIDLAKSNSRSKRQRADD GP  SDK
Sbjct: 121 QPFAFAEFLDQHSAITAMHALNGMIFDLEKGSTLYIDLAKSNSRSKRQRADDSGPV-SDK 180

Query: 208 KHKGSPAIPRGSAELAGVGSFHIPGMGSSAHNTIGYPSAQSHRSYNSRGISEANAAKSSH 267
           KHKGSPA  RGS EL G+GSFHIPGMG+SA+NTIGYPSAQSH SY SRG SEANA KSSH
Sbjct: 181 KHKGSPAFARGSVEL-GIGSFHIPGMGNSAYNTIGYPSAQSHWSYTSRGTSEANAPKSSH 240

Query: 268 SSASHIPQENPPCPTIFVANLGPESSEQELTKVFSRCRGFLKLKIQGTYGAPVAFVDFQD 327
           SSASH+PQ+NPPCPTIFVANL P+ SEQEL +VFSR RGFLKLKIQ TYGAPVAFVDFQD
Sbjct: 241 SSASHVPQDNPPCPTIFVANLSPKCSEQELIQVFSRYRGFLKLKIQSTYGAPVAFVDFQD 300

Query: 328 TACSSEAMSQLQGTVLFSSSSGEGLRLEYAKSRMGMRRKPK 369
           TACS+EA+ QLQGTVLFS  +G+G+RLEYAKSRMG RRK K
Sbjct: 301 TACSTEALGQLQGTVLFSDPAGDGMRLEYAKSRMGKRRKTK 303

[Close]

BLAST of Spo16653.1 vs. ExPASy Swiss-Prot
Match: CPO_DROME (Protein couch potato OS=Drosophila melanogaster GN=cpo PE=2 SV=4)

HSP 1 Score: 79.7 bits (195), Expect = 7.300e-14
Identity = 57/161 (35.40%), Postives = 82/161 (50.93%), Query Frame = 1


		  
Query: 103 SSRDEVRTLFVAGLPEDVKPRELYNLFRDFPGYLSSNLRSPSNN---SQPFAFVVFADQQ 162
           S+ +EVRTLFV+GLP D KPRELY LFR + GY  S L+  S N   + P  FV F  + 
Sbjct: 436 SNEEEVRTLFVSGLPMDAKPRELYLLFRAYEGYEGSLLKVTSKNGKTASPVGFVTFHTRA 495

Query: 163 SAVTAMHEIHGMVFDLEKGSTLYIDLAKSNSR-SKRQRADDEGPAASDKK-------HKG 222
            A  A  ++ G+ FD +   T+ ++ AKSN++ SK +   +    AS          H G
Sbjct: 496 GAEAAKQDLQGVRFDPDMPQTIRLEFAKSNTKVSKPKPQPNTATTASHPALMHPLTGHLG 555

Query: 223 SPAIPRGSAEL-------AGVGSFHIPGMGSSAHNTIGYPS 246
            P  P G  EL       +   +  +PG  +  H T+ +P+
Sbjct: 556 GPFFP-GGPELWHHPLAYSAAAAAELPGAAALQHATLVHPA 595

[Close]

BLAST of Spo16653.1 vs. ExPASy Swiss-Prot
Match: RBPMS_XENLA (RNA-binding protein with multiple splicing OS=Xenopus laevis GN=rbpms PE=2 SV=1)

HSP 1 Score: 79.0 bits (193), Expect = 1.200e-13
Identity = 41/91 (45.05%), Postives = 59/91 (64.84%), Query Frame = 1


		  
Query: 106 DEVRTLFVAGLPEDVKPRELYNLFRDFPGYLSSNLRSPSNNSQPFAFVVFADQQSAVTAM 165
           +EVRTLFV+GLP D+KPRELY LFR F GY  S ++  S   QP  FV F ++  A  A 
Sbjct: 17  EEVRTLFVSGLPIDIKPRELYLLFRPFKGYEGSLIKLTS--KQPVGFVTFDNRAGAEAAK 76

Query: 166 HEIHGMVFDLEKGSTLYIDLAKSNSRSKRQR 197
           + ++G+ FD E   TL ++ AK+N++  + +
Sbjct: 77  NALNGIRFDPENPQTLRLEFAKANTKMAKNK 105

[Close]

BLAST of Spo16653.1 vs. ExPASy Swiss-Prot
Match: RBPMS_CHICK (RNA-binding protein with multiple splicing OS=Gallus gallus GN=RBPMS PE=2 SV=1)

HSP 1 Score: 79.0 bits (193), Expect = 1.200e-13
Identity = 41/91 (45.05%), Postives = 58/91 (63.74%), Query Frame = 1


		  
Query: 106 DEVRTLFVAGLPEDVKPRELYNLFRDFPGYLSSNLRSPSNNSQPFAFVVFADQQSAVTAM 165
           +EVRTLFV+GLP D+KPRELY LFR F GY  S ++  S   QP  FV F  +  A  A 
Sbjct: 19  EEVRTLFVSGLPVDIKPRELYLLFRPFKGYEGSLIKLTS--KQPVGFVTFDSRAGAEAAK 78

Query: 166 HEIHGMVFDLEKGSTLYIDLAKSNSRSKRQR 197
           + ++G+ FD E   TL ++ AK+N++  + +
Sbjct: 79  NALNGIRFDPENPQTLRLEFAKANTKMAKSK 107

[Close]

BLAST of Spo16653.1 vs. ExPASy Swiss-Prot
Match: RBPS2_HUMAN (RNA-binding protein with multiple splicing 2 OS=Homo sapiens GN=RBPMS2 PE=1 SV=1)

HSP 1 Score: 79.0 bits (193), Expect = 1.200e-13
Identity = 40/91 (43.96%), Postives = 59/91 (64.84%), Query Frame = 1


		  
Query: 106 DEVRTLFVAGLPEDVKPRELYNLFRDFPGYLSSNLRSPSNNSQPFAFVVFADQQSAVTAM 165
           +EVRTLFV+GLP D+KPRELY LFR F GY  S ++  +   QP  FV+F  +  A  A 
Sbjct: 28  EEVRTLFVSGLPVDIKPRELYLLFRPFKGYEGSLIKLTAR--QPVGFVIFDSRAGAEAAK 87

Query: 166 HEIHGMVFDLEKGSTLYIDLAKSNSRSKRQR 197
           + ++G+ FD E   TL ++ AK+N++  + +
Sbjct: 88  NALNGIRFDPENPQTLRLEFAKANTKMAKSK 116

[Close]

BLAST of Spo16653.1 vs. ExPASy Swiss-Prot
Match: RBPS2_MOUSE (RNA-binding protein with multiple splicing 2 OS=Mus musculus GN=Rbpms2 PE=1 SV=1)

HSP 1 Score: 77.8 bits (190), Expect = 2.800e-13
Identity = 47/119 (39.50%), Postives = 67/119 (56.30%), Query Frame = 1


		  
Query: 106 DEVRTLFVAGLPEDVKPRELYNLFRDFPGYLSSNLRSPSNNSQPFAFVVFADQQSAVTAM 165
           +EVRTLFV+GLP D+KPRELY LFR F GY  S ++  S   QP  FV+F  +  A  A 
Sbjct: 22  EEVRTLFVSGLPVDIKPRELYLLFRPFKGYEGSLIKLTSR--QPVGFVIFDSRAGAEAAK 81

Query: 166 HEIHGMVFDLEKGSTLYIDLAKSNSRSKRQRADDEGPAASDKKHKGSPAIPRGSAELAG 225
           + ++G+ FD E   TL ++ AK+N++  + +        S     G+  I R   +L G
Sbjct: 82  NALNGIRFDPENPQTLRLEFAKANTKMAKSKLIATPNPTSVHPALGAHLIARDPYDLMG 138

[Close]

BLAST of Spo16653.1 vs. TAIR (Arabidopsis)
Match: AT2G42240.2 (RNA-binding (RRM/RBD/RNP motifs) family protein)

HSP 1 Score: 278.1 bits (710), Expect = 7.900e-75
Identity = 166/305 (54.43%), Postives = 204/305 (66.89%), Query Frame = 1


		  
Query: 55  YNTHYHPP---PPPPPQHLPPPVSLQHSHHIPPPSLHPPPPSFSHLLPPPHSSRDEVRTL 114
           Y +HY+ P   PPPPP   P P++  HS ++P           +H+      +RDEVRTL
Sbjct: 7   YYSHYNLPAMVPPPPPGVSPIPITSAHSVYLP-----------THV---SIGARDEVRTL 66

Query: 115 FVAGLPEDVKPRELYNLFRDFPGYLSSNLRSPSNNSQPFAFVVFADQQSAVTAMHEIHGM 174
           FVAGLPEDVKPRE+YNLFR+FPGY +S+LRS S+ ++PFAF VF+D QSAV  MH ++GM
Sbjct: 67  FVAGLPEDVKPREIYNLFREFPGYETSHLRS-SDGAKPFAFAVFSDLQSAVAVMHALNGM 126

Query: 175 VFDLEKGSTLYIDLAKSNSRSKRQRADDEGPAASDKKHKGSPAIPRGSAELAGVGSFHIP 234
           VFDLEK STL+IDLAKSN +SKR R DD   +    K   +          +G GSF  P
Sbjct: 127 VFDLEKHSTLHIDLAKSNPKSKRSRTDDGWESLKKLKSWNTTTE-------SGFGSFQTP 186

Query: 235 GMGSSAHNTIGYPSAQSHRSYNSRGISEANAAKSSHSSASHIPQENPPCPTIFVANLGPE 294
           GM SSA+NTIGY  AQS    N  G +  +   S  +          PCPT+F+AN+GP 
Sbjct: 187 GMSSSAYNTIGYSPAQSQGIANVAGRAPTSRKPSKAAD---------PCPTLFIANMGPN 246

Query: 295 SSEQELTKVFSRCRGFLKLKIQGTYGAPVAFVDFQDTACSSEAMSQLQGTVLFSSSSGEG 354
            +E EL +VFSRCRGFLKLKIQGTYG PVAFVDFQD +CSSEA+  LQGTVL+SS +GE 
Sbjct: 247 CTEAELIQVFSRCRGFLKLKIQGTYGTPVAFVDFQDVSCSSEALHTLQGTVLYSSLTGEV 280

Query: 355 LRLEY 357
           LRL+Y
Sbjct: 307 LRLQY 280

[Close]

BLAST of Spo16653.1 vs. TAIR (Arabidopsis)
Match: AT3G21215.1 (RNA-binding (RRM/RBD/RNP motifs) family protein)

HSP 1 Score: 120.9 bits (302), Expect = 1.600e-27
Identity = 107/341 (31.38%), Postives = 161/341 (47.21%), Query Frame = 1


		  
Query: 34  YYYAPPPSHPPPPPSDIHSAFYNTHYHPPPPPPPQHLPPPVSLQHSHHIPPPSLHPPPPS 93
           Y+   PP+  PPPP+ + SA       PP PPP  H PPP  +   +H  PP        
Sbjct: 9   YHQQWPPAGAPPPPAAVSSAA------PPHPPPIHHHPPPPPVLVDNHNRPPY------- 68

Query: 94  FSHLLPPPHSSRDEVRTLFVAGLPEDVKPRELYNLFRDFPGYLSSNLRSPSNNSQPFAFV 153
                       DE+RT+F+AGLP+DVK REL NL R  PGY +S +       +P  F 
Sbjct: 69  ------------DELRTIFIAGLPDDVKERELLNLLRWLPGYEASQVNF--KGEKPMGFA 128

Query: 154 VFADQQSAVTAMHEIHGMVFDLEKGSTLYIDLAKSNSRSKRQRADDEGPAASDKKHKGSP 213
           +F+  Q A+ A   +  MVFD E  S ++ ++AK N   KR    D       K+ +   
Sbjct: 129 LFSTAQFAMAAKDTLQHMVFDAESKSVIHTEMAKKNLFVKRGIVGDSNAYDQSKRLRTGG 188

Query: 214 AIPRGSAELAGVGSFHIPG--MGSSAHNTIGY--PSAQSHRSYNSRGISEAN----AAKS 273
                   +     FH P   +    H  +    P    +  Y++  +        AA S
Sbjct: 189 DCTHS---VYSPSPFHPPPPPVWGPPHGYMAPAPPPYDPYAGYHAPPVPMPTPPPIAAPS 248

Query: 274 SHSSASHIPQENPPCPTIFVANLGPESSEQELTKVFSRCRGFLKLKIQGTYGAPVAFVDF 333
           S+    +I ++NPPC T+F+ NLG   +E+EL  + S   GF ++KI       V F++F
Sbjct: 249 SYVPVQNI-KDNPPCNTLFIGNLGENINEEELRSLLSAQPGFKQMKILRQERHTVCFIEF 308

Query: 334 QDTACSSEAMSQLQGTVLFSSSSGEGLRLEYAKSRMGMRRK 367
           +D   ++     LQG V+ SS S  G+R++Y+K+  G R++
Sbjct: 309 EDVNSATNVHHNLQGAVIPSSGS-IGMRIQYSKNPYGKRKE 317

[Close]

BLAST of Spo16653.1 vs. TAIR (Arabidopsis)
Match: AT3G13700.1 (RNA-binding (RRM/RBD/RNP motifs) family protein)

HSP 1 Score: 118.6 bits (296), Expect = 8.000e-27
Identity = 96/297 (32.32%), Postives = 142/297 (47.81%), Query Frame = 1


		  
Query: 78  HSHHIPPPSLHPPPPSFSHLLPPPHSSRDEVRTLFVAGLPEDVKPRELYNLFRDFPGYLS 137
           H HH+PP             LP        + TLFV+GLP DVK RE++NLFR   G+ S
Sbjct: 18  HPHHLPPQ------------LPLLADEPGAINTLFVSGLPNDVKAREIHNLFRRRHGFES 77

Query: 138 SNLRSPSNNSQ------------------PFAFVVFADQQSAVTAMHEIHGMVFDLEKGS 197
             L+      Q                    AF  F   + A+ AM+E++G+ FD + GS
Sbjct: 78  CQLKYTGRGDQVCKNLQFLFFFIPIFRKAVVAFATFTSHRFALAAMNELNGVKFDPQTGS 137

Query: 198 TLYIDLAKSNSRSKRQRADDEGP-AASDKKHKGSPAIPRGSAELAGVGSFHIPGMGSSAH 257
            L+I+LA+SNSR  R+     GP    D ++K    I +   + +  G      +    +
Sbjct: 138 NLHIELARSNSR--RKERPGSGPYVVIDNRNK---EISKSQDDQSDEGDSDPDEVQEPGN 197

Query: 258 NTIGYPSAQSHRSYNSRGISEANAAKSSHSSASHIPQENPPCPTIFVANLGPESSEQELT 317
           +     +  +    +S   S+A +A      AS        C T+F+ANLGP  +E EL 
Sbjct: 198 SDSPKENDTTKSEADSEPDSKAPSANGHLEKASEGGSGARACSTLFIANLGPNCTEDELK 257

Query: 318 KVFSRCRGFLKLKIQGTYGAPVAFVDFQDTACSSEAMSQLQGTVLFSSSSGEGLRLE 356
           ++ SR  GF  LKI+   G PVAF DF++   +++AM+ LQG +L SS  G G+ +E
Sbjct: 258 QLLSRYPGFHILKIRARGGMPVAFADFEEIEQATDAMNHLQGNLLSSSDRG-GMHIE 296

The following BLAST results are available for this feature:

BLAST of Spo16653.1 vs. NCBI nr
BLAST of Spo16653.1 vs. UniProtKB/TrEMBL
BLAST of Spo16653.1 vs. ExPASy Swiss-Prot
BLAST of Spo16653.1 vs. TAIR (Arabidopsis)

BLAST of Spo16653.1 vs. NCBI nr
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. NCBI nr)
Total hits: 5


Match Name	E-value	Identity	Description
gi\|902103180\|gb\|KNA03590.1\|	4.5e-205	100.	hypothetical protein SOVF_2076...	[more]
gi\|902103179\|gb\|KNA03589.1\|	2.4e-203	99.7	hypothetical protein SOVF_2076...	[more]
gi\|902103181\|gb\|KNA03591.1\|	4.3e-200	98.3	hypothetical protein SOVF_2076...	[more]
gi\|731336926\|ref\|XP_010679518.1\|	1.9e-126	73.6	PREDICTED: RNA-binding protein...	[more]
gi\|731336928\|ref\|XP_010679519.1\|	1.0e-124	73.3	PREDICTED: RNA-binding protein...	[more]

BLAST of Spo16653.1 vs. UniProtKB/TrEMBL
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. UniprotKB/TrEMBL)
Total hits: 5


Match Name	E-value	Identity	Description
A0A0K9Q8J6_SPIOL	3.1e-205	100.	Uncharacterized protein (Fragm...	[more]
A0A0K9Q8K9_SPIOL	1.7e-203	99.7	Uncharacterized protein (Fragm...	[more]
A0A0K9QAP5_SPIOL	3.0e-200	98.3	Uncharacterized protein (Fragm...	[more]
A0A0J8C831_BETVU	1.3e-126	73.6	Uncharacterized protein OS=Bet...	[more]
A0A0J8F249_BETVU	7.1e-125	73.3	Uncharacterized protein OS=Bet...	[more]

BLAST of Spo16653.1 vs. ExPASy Swiss-Prot
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. ExPASy SwissProt)
Total hits: 5


Match Name	E-value	Identity	Description
CPO_DROME	7.3e-14	35.4	Protein couch potato OS=Drosop...	[more]
RBPMS_XENLA	1.2e-13	45.0	RNA-binding protein with multi...	[more]
RBPMS_CHICK	1.2e-13	45.0	RNA-binding protein with multi...	[more]
RBPS2_HUMAN	1.2e-13	43.9	RNA-binding protein with multi...	[more]
RBPS2_MOUSE	2.8e-13	39.5	RNA-binding protein with multi...	[more]

BLAST of Spo16653.1 vs. TAIR (Arabidopsis)
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. TAIR)
Total hits: 3


Match Name	E-value	Identity	Description
AT2G42240.2	7.9e-75	54.4	RNA-binding (RRM/RBD/RNP motif...	[more]
AT3G21215.1	1.6e-27	31.3	RNA-binding (RRM/RBD/RNP motif...	[more]
AT3G13700.1	8.0e-27	32.3	RNA-binding (RRM/RBD/RNP motif...	[more]

InterPro

Analysis Name: InterPro Annotations of S. oleracea
Date Performed: 2018-06-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR000504	RNA recognition motif domain	PFAM	PF00076	RRM_1	coord: 283..344 score: 4.6E-6coord: 111..174 score: 7.3
IPR000504	RNA recognition motif domain	SMART	SM00360	rrm1_1	coord: 110..184 score: 3.8E-10coord: 282..355 score: 0
IPR000504	RNA recognition motif domain	PROFILE	PS50102	RRM	coord: 109..188 score: 13.993coord: 281..359 score: 12
IPR012677	Nucleotide-binding alpha-beta plait domain	GENE3D	3.30.70.330		coord: 271..359 score: 1.2E-18coord: 101..195 score: 1.5
IPR012677	Nucleotide-binding alpha-beta plait domain	unknown	SSF54928	RNA-binding domain, RBD	coord: 278..344 score: 1.36E-25coord: 107..198 score: 1.36
None	No IPR available	PANTHER	PTHR24012	FAMILY NOT NAMED	coord: 272..365 score: 2.1E-31coord: 26..44 score: 2.1E-31coord: 106..193 score: 2.1
None	No IPR available	PANTHER	PTHR24012:SF393	SUBFAMILY NOT NAMED	coord: 106..193 score: 2.1E-31coord: 272..365 score: 2.1E-31coord: 26..44 score: 2.1

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006508	proteolysis
biological_process	GO:0009737	response to abscisic acid
biological_process	GO:0009414	response to water deprivation
biological_process	GO:0009627	systemic acquired resistance
cellular_component	GO:0005783	endoplasmic reticulum
cellular_component	GO:0005576	extracellular region
cellular_component	GO:0016020	membrane
molecular_function	GO:0003676	nucleic acid binding
molecular_function	GO:0000166	nucleotide binding
molecular_function	GO:0004190	aspartic-type endopeptidase activity
molecular_function	GO:0003677	DNA binding
molecular_function	GO:0005515	protein binding

RNA-Seq Expression

Co-expression


Gene	r value	Expression
Spo08037	0.67	Barchart \| Table
Spo02287	0.66	Barchart \| Table
Spo19290	0.65	Barchart \| Table
Spo21792	0.65	Barchart \| Table