Spo09866 (gene)

Overview
NameSpo09866
Typegene
OrganismSpinacia oleracea (Spinach)
DescriptionUnknown protein
LocationSuper_scaffold_201 : 644321 .. 645210 (-)
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGACTGAATCGAGTGGTAGTTCTTCTATAATATTTTACTTGCTAGGCTTCCCTATGATTTTGGACCTGCAAGTTAGCTAATGCAAAACAACCCTTTGAACAATCAGGTTATGGGAATTTTATGTTAATGTTAGATTCATCAGTATTTTTCATATTGTATTCCCCTAACACCATTAGCGCATATGAGTTTGTAGATCTTTACCTGCTTGCGAGCAGCTTTGTAATGCCAGGTACAAAAATATCTTTTGGGTTCAAGGAGGACTGGAAGCAGCAGAAGAAGAGGTATTTACTTTAATTTGTATAGTCAAAATGTTTTGTTTTCTTGTGTGTTTTCTTTGAATGAAGGGAACTCAAGGTCTAATGCTGTGATGTACTCATACAGGATCTGCAGAGGGAAGGTTCACAACCATTTAAATTTGCCAGAATTTTCTTGGGTTAGTAGTCTGTTCAATATAACTTTTATTACTGATTTTGTGAATATGGCTATGTCATCTCAAGTTCTAGAAAATTCCGTCTCTCACTCACGTCGTATTATATTGATCCAAATTTTCTGTTTGAACTACCTTATTAAGTGCTTCATTATTTTTGTACATTCTTACAAGTAACCCTGCAGTTGCCTTGACTTTTAAAAGAATAATAGTGGTATTTCTGGGATTGATATAGAGTGAACTAAAACTCTACAACTTTATTTACAAAATTTATACAGTATATACTTCGTATTTAAACTTGACTAGGAAGTACATTTCAGTATGAAAAATGCGGACCAGGCCTCAATGTTTATGGGTGGATATGAAAAGTTTAAACCCTCAACTTGTTGGGATTATGTTTACCTTAAACTACACAAGATTACCTGTACTTTTTCTTCTTTAATTTTAAAATTATGTCCTTGA

mRNA sequence

ATGACTGAATCGAGTGGTAGTTCTTCTATAATATTTTACTTGCTAGGCTTCCCTATGATTTTGGACCTGCAATTTGTAGATCTTTACCTGCTTGCGAGCAGCTTTGTAATGCCAGGTACAAAAATATCTTTTGGGTTCAAGGAGGACTGGAAGCAGCAGAAGAAGAGGATCTGCAGAGGGAAGGTTCACAACCATTTAAATTTGCCAGAATTTTCTTGGGTTAGTAGTCTGTTCAATATAACTTTTATTACTGATTTTGTGAATATGGCTATGTCATCTCAAGTTCTAGAAAATTCCGTCTCTCACTCACGTCTACATTTCAGTATGAAAAATGCGGACCAGGCCTCAATGTTTATGGGTGGATATGAAAAGTTTAAACCCTCAACTTGTTGGGATTATGTTTACCTTAAACTACACAAGATTACCTGTACTTTTTCTTCTTTAATTTTAAAATTATGTCCTTGA

Coding sequence (CDS)

ATGACTGAATCGAGTGGTAGTTCTTCTATAATATTTTACTTGCTAGGCTTCCCTATGATTTTGGACCTGCAATTTGTAGATCTTTACCTGCTTGCGAGCAGCTTTGTAATGCCAGGTACAAAAATATCTTTTGGGTTCAAGGAGGACTGGAAGCAGCAGAAGAAGAGGATCTGCAGAGGGAAGGTTCACAACCATTTAAATTTGCCAGAATTTTCTTGGGTTAGTAGTCTGTTCAATATAACTTTTATTACTGATTTTGTGAATATGGCTATGTCATCTCAAGTTCTAGAAAATTCCGTCTCTCACTCACGTCTACATTTCAGTATGAAAAATGCGGACCAGGCCTCAATGTTTATGGGTGGATATGAAAAGTTTAAACCCTCAACTTGTTGGGATTATGTTTACCTTAAACTACACAAGATTACCTGTACTTTTTCTTCTTTAATTTTAAAATTATGTCCTTGA

Protein sequence

MTESSGSSSIIFYLLGFPMILDLQFVDLYLLASSFVMPGTKISFGFKEDWKQQKKRICRGKVHNHLNLPEFSWVSSLFNITFITDFVNMAMSSQVLENSVSHSRLHFSMKNADQASMFMGGYEKFKPSTCWDYVYLKLHKITCTFSSLILKLCP
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Spo09866.1Spo09866.1mRNA


Homology
[Close]
BLAST of Spo09866.1 vs. NCBI nr
Match: gi|902226226|gb|KNA20303.1| (hypothetical protein SOVF_053620 isoform B [Spinacia oleracea])

HSP 1 Score: 89.0 bits (219), Expect = 8.000e-15
Identity = 38/41 (92.68%), Postives = 38/41 (92.68%), Query Frame = 1 

		  

Query: 37 MPGTKISFGFKEDWKQQKKRICRGKVHNHLNLPEFSWVSSL 78
          MPGTKISFGFKEDWKQQKKRICRGKVHNHLNLPEFSW   L
Sbjct: 1  MPGTKISFGFKEDWKQQKKRICRGKVHNHLNLPEFSWEEKL 41
[Close]
BLAST of Spo09866.1 vs. UniProtKB/TrEMBL
Match: A0A0K9RLB6_SPIOL (Uncharacterized protein OS=Spinacia oleracea GN=SOVF_053620 PE=4 SV=1)

HSP 1 Score: 89.0 bits (219), Expect = 5.600e-15
Identity = 38/41 (92.68%), Postives = 38/41 (92.68%), Query Frame = 1 

		  

Query: 37 MPGTKISFGFKEDWKQQKKRICRGKVHNHLNLPEFSWVSSL 78
          MPGTKISFGFKEDWKQQKKRICRGKVHNHLNLPEFSW   L
Sbjct: 1  MPGTKISFGFKEDWKQQKKRICRGKVHNHLNLPEFSWEEKL 41
The following BLAST results are available for this feature:
BLAST of Spo09866.1 vs. NCBI nr
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. NCBI nr)
Total hits: 1
Match NameE-valueIdentityDescription
gi|902226226|gb|KNA20303.1|8.0e-1592.6hypothetical protein SOVF_0536... [more]
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BLAST of Spo09866.1 vs. UniProtKB/TrEMBL
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. UniprotKB/TrEMBL)
Total hits: 1
Match NameE-valueIdentityDescription
A0A0K9RLB6_SPIOL5.6e-1592.6Uncharacterized protein OS=Spi... [more]
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BLAST of Spo09866.1 vs. ExPASy Swiss-Prot
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. ExPASy SwissProt)
Total hits: 0
Match NameE-valueIdentityDescription
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BLAST of Spo09866.1 vs. TAIR (Arabidopsis)
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. TAIR)
Total hits: 0
Match NameE-valueIdentityDescription
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GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0006754 ATP biosynthetic process
biological_process GO:0009987 cellular process
biological_process GO:0046497 nicotinate nucleotide metabolic process
biological_process GO:0006119 oxidative phosphorylation
biological_process GO:0009826 unidimensional cell growth
biological_process GO:0016126 sterol biosynthetic process
biological_process GO:0055114 oxidation-reduction process
biological_process GO:0010358 leaf shaping
biological_process GO:0009867 jasmonic acid mediated signaling pathway
biological_process GO:0016102 diterpenoid biosynthetic process
biological_process GO:0016132 brassinosteroid biosynthetic process
biological_process GO:0009395 phospholipid catabolic process
biological_process GO:0034645 cellular macromolecule biosynthetic process
biological_process GO:0046486 glycerolipid metabolic process
biological_process GO:0005975 carbohydrate metabolic process
biological_process GO:0016310 phosphorylation
biological_process GO:0007205 protein kinase C-activating G-protein coupled receptor signaling pathway
biological_process GO:0009113 purine nucleobase biosynthetic process
biological_process GO:0006189 'de novo' IMP biosynthetic process
biological_process GO:0006468 protein phosphorylation
biological_process GO:0048193 Golgi vesicle transport
biological_process GO:0042967 obsolete acyl-carrier-protein biosynthetic process
biological_process GO:1902600 proton transmembrane transport
biological_process GO:0006769 nicotinamide metabolic process
cellular_component GO:0005789 endoplasmic reticulum membrane
cellular_component GO:0005829 cytosol
cellular_component GO:0005783 endoplasmic reticulum
cellular_component GO:0016021 integral component of membrane
cellular_component GO:0005886 plasma membrane
cellular_component GO:0005794 Golgi apparatus
cellular_component GO:0009570 chloroplast stroma
molecular_function GO:0010012 steroid 22-alpha hydroxylase activity
molecular_function GO:0004672 protein kinase activity
molecular_function GO:0008374 O-acyltransferase activity
molecular_function GO:0005524 ATP binding
molecular_function GO:0005198 structural molecule activity
molecular_function GO:0046872 metal ion binding
molecular_function GO:0003951 NAD+ kinase activity
molecular_function GO:0008553 proton-exporting ATPase activity, phosphorylative mechanism
molecular_function GO:0050597 taxane 10-beta-hydroxylase activity
molecular_function GO:0004143 diacylglycerol kinase activity
molecular_function GO:0004637 phosphoribosylamine-glycine ligase activity
molecular_function GO:0009055 electron transfer activity
molecular_function GO:0020037 heme binding
molecular_function GO:0005506 iron ion binding
molecular_function GO:0004620 phospholipase activity
RNA-Seq Expression