Spo21193 (gene) | SpinachBase

Overview


Name	Spo21193
Type	gene
Organism	Spinacia oleracea (Spinach)
Description	Unknown protein
Location	Super_scaffold_213 : 2213047 .. 2216153 (+)

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

CCAAAAACCACCTAACCAAGGAACCAGCTTTTCACATCCTACGCATCCCTTAGCTAATAAGATAAAAGCACCTTCCAGTACGTAATTACAACGCTCAACTAATATCATATCATTAATAATATCATTTTATGATTCTAATTCAATTCCCTTCAAACTCACACTTGTGCACCAAAAAAAACTTCATCAAAAAATTTTTTTTACTTCTGCCAAAAAAAAAACCAAAAATTCTATTTACAGTTTCACAAAACTCAATAAAATTTCCAATTAAGGCAAACACATGTCAATTATACTACCAATTTCACTAAGATCACTATCATGTTCGATACTGTTAGTGCTAATTTTTATAGCTTCAATTAATGGCTTTGACGAAACAGGATCATCCGACCCAAGCATAAAGTGTGGTGGTTGTTCTCCTTGTGGTAATCCATCATGTTACTTAAGTCCTCCACCCCCGCCTTCTCCACCACCACCACCACCGCCAAAGAAGAAGTCGATCTCCTCATACTGCCCGCCACCGCCATCATCGACAGGAACAGGGTCAGGATTTGTGTACATGACAGCACCCCCGGGCGAGCTTTACCCAGTTGTTCAGAACTATTCGGGCACGCCTCCAAATTTGGCAGCTGCTATAAATTCACTCCTTGGGTTTGTATTAATTATTTGTATGGTTGTAAATCAGTAAATTTCAATAGAATATTGTTGTATTTAAAGTTTAAAAGTCAAACGGTTGTCAAAATCTCTGTTTCATGTGTAATCTATACGTGTAATAATAGAATTTCTGTATGAAAACCATCAATTTTGTTTTTGATCAAGCTGCTGAAGTATATCTTTCTGATGATAAGAATTTTGTTCTTTTCAATTGCTATATAAATAGCTTGTGAACAGAGACTAAAAAGTCTTAGTAATTGTACTATTTCATCGGGTTTTGACCATCAAATCAACAAAATTATAAGCACAACAGCTATCTATACTAATACATTAAAAGGCGTTGTGAAAAATGTATATGTGTCACGTAAGTGTGGATGATAGTTCTCATTACCATCTTAACCAACTACCAATTGTGGTTTATCTCTTCACATTAATTTATAAATAAATGTTCACATGAAGTCTAAAACAAATAAATTTTTATGTGACTTTTTAATGTCTATGGACTATTTTGAAAAGAAAAAAAATTAAAGCATTATGACAACCATGAAGAAACATAATGTCCAATTTGGTGTCATAGGATTGCCTTACATAGCTGCATATATATCTAATTTGGTGTTTATTAATTTGACGCACTTAGTTCCACAAGAAAACAAATTATACAAATTGTAAGATGATATGATTGAAAACTTATTTGCCATGATAAATGACTTAGCATGTCTGTGTTTGACGAACTTAACGGATATTTTTCATTCTATAGAATACATGTATTTTGGTCAAGTATTGAGCTCAAGAAAAATCTAAAACTTTCGTTATTCAATGTAGCAGTCGGGGCATCGCCCGGGCCACACACTAGTTATAGTATTATATGTAGAAAAATAAAGGAACTTTTTTGTCAGAAATGATCTTTTATAGTCAAAAAGTTGTGAGTTGTGACAAATTATCTTTTATTAAAAGGTTGTGAGATAGGAACCAAATCCGATTTTTGTTTTTTGTGAATAGGGACCAAGACCCATTTTCCAACGGTCAAACTCATTTCTCCAGCATTAACAACAAGAGAGACAACACTGAACTTATAAAACTGATCTCATACCAGTCTTTGAAAAGATCAGTCATCAGAAGTAAGGAAAGAAATAAGAGACTCATATTTCAGAAAGTGCGAAACAAGCTCACTTCGCTTAGCCAATTCGAAGTCCTGGAATTGGAACGCAGGTGCACACGTACATCCGACAAGAGAGTAGTGGTTCTCGTTATCTCTTGGGGCGGCTTTAGTTGCCACACCTTCGGTGGAAATGCAGATATCCTTGGTTGGAAAGGACCCGAACCAGACATTAGGTGGCACCGTGTACTGGGGTTGCTGATTCTCCATCAAATCTGGACCAAGACATGTTAACTTGATACTTCCATCGTTCTCGTTAAGCTCTATTATCTATAAGGGCCAAAATTGTCAAATGTTCAGGTTAGATTGGGTTCAGACTTAATTCAGAGTAAGCTGCTGTAATATATTACAGAGAGAAAAATCGTCCACGCGAAAAATATACTTAAAATTATCAAGTGAAAACGACTGAAGAAACTTATCAGAACCTAACTTAACCTAACTTATCTGAACTTATTTGAACTTATTTTATCTGGAATTTCTGAAGTAAACTTATTTGTGTGTGAAAATGTATGAAAAACTTATTTTTTTTGAACTTATCTTAACTTGACTTATCTGAACTTATTTTGTCTGAAATAAGTCAAAATAAATCAAACAAAACAGAACTTAATAGGACGTTCAAGTGCAAGGCCCAAAACCTTCCTGAATGACATCCTTAGAGTACAATGTGTTTAAACATAAAAACTCTTCCAACTGTAAATCCTCAATCTTTCAAGTAATAATCGTTTTGTTACTCTTAATTCATTGTTTTGTTAAGGTTCCTTTCGATTATTCATTGCTTGGTTACACATTTTTCTCTAGATGGTCAGCTCCAAAAAGGAATCCCACTTCAAAGTTCAAACTCTTTCTCAAATTTCTTCCCCATTTCCTAAATATCATGCATGCAATCCCTAAATGGTAATGGAAGATGAAGGTAGGTTACAGAGAGAGATCCTCAAAGCAGCAAATTAATTAAAAATCACATCATAATGCATAGATGATGAGCTTTTACCGTAAGAGGCTCCCCCAAATAGAAATGCCAGGTTTCTGCACATGGAATCCGGTGAAGTTTTGACACACACCCAGACGGCAGCAAGAAGTAAATTGATGTGCTTACAGCCCGATCAACCTTGTCTGCAATAAGACAGTGTCTCAACAGTGTCAATACATATCTCAAATAACACTGGTTCCACACTTAGACATATAGAATTAGAACAATCATTTGATGATTGCACTTTTCAGTGGGATAATAAAAGGCGGAATTTCATTTCACAGCATTAAGAAGGCTGCTGCAGAGAAGGGATGGATAACTGATAAGAGATCATAA

mRNA sequence

CCAAAAACCACCTAACCAAGGAACCAGCTTTTCACATCCTACGCATCCCTTAGCTAATAAGATAAAAGCACCTTCCAGTACGTAATTACAACGCTCAACTAATATCATATCATTAATAATATCATTTTATGATTCTAATTCAATTCCCTTCAAACTCACACTTGTGCACCAAAAAAAACTTCATCAAAAAATTTTTTTTACTTCTGCCAAAAAAAAAACCAAAAATTCTATTTACAGTTTCACAAAACTCAATAAAATTTCCAATTAAGGCAAACACATGTCAATTATACTACCAATTTCACTAAGATCACTATCATGTTCGATACTGTTAGTGCTAATTTTTATAGCTTCAATTAATGGCTTTGACGAAACAGGATCATCCGACCCAAGCATAAAGTGTGGTGGTTGTTCTCCTTGTGGTAATCCATCATGTTACTTAAGTCCTCCACCCCCGCCTTCTCCACCACCACCACCACCGCCAAAGAAGAAGTCGATCTCCTCATACTGCCCGCCACCGCCATCATCGACAGGAACAGGGTCAGGATTTGTGTACATGACAGCACCCCCGGGCGAGCTTTACCCAGTTGTTCAGAACTATTCGGGCACGCCTCCAAATTTGGCAGCTGCTATAAATTCACTCCTTGGTGGGATAATAAAAGGCGGAATTTCATTTCACAGCATTAAGAAGGCTGCTGCAGAGAAGGGATGGATAACTGATAAGAGATCATAA

Coding sequence (CDS)

ATGTCAATTATACTACCAATTTCACTAAGATCACTATCATGTTCGATACTGTTAGTGCTAATTTTTATAGCTTCAATTAATGGCTTTGACGAAACAGGATCATCCGACCCAAGCATAAAGTGTGGTGGTTGTTCTCCTTGTGGTAATCCATCATGTTACTTAAGTCCTCCACCCCCGCCTTCTCCACCACCACCACCACCGCCAAAGAAGAAGTCGATCTCCTCATACTGCCCGCCACCGCCATCATCGACAGGAACAGGGTCAGGATTTGTGTACATGACAGCACCCCCGGGCGAGCTTTACCCAGTTGTTCAGAACTATTCGGGCACGCCTCCAAATTTGGCAGCTGCTATAAATTCACTCCTTGGTGGGATAATAAAAGGCGGAATTTCATTTCACAGCATTAAGAAGGCTGCTGCAGAGAAGGGATGGATAACTGATAAGAGATCATAA

Protein sequence

MSIILPISLRSLSCSILLVLIFIASINGFDETGSSDPSIKCGGCSPCGNPSCYLSPPPPPSPPPPPPPKKKSISSYCPPPPSSTGTGSGFVYMTAPPGELYPVVQNYSGTPPNLAAAINSLLGGIIKGGISFHSIKKAAAEKGWITDKRS

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Spo21193.1	Spo21193.1	mRNA

Homology

[Close]

BLAST of Spo21193.1 vs. NCBI nr
Match: gi|870856329|gb|KMT07985.1| (hypothetical protein BVRB_6g144630 [Beta vulgaris subsp. vulgaris])

HSP 1 Score: 142.1 bits (357), Expect = 7.800e-31
Identity = 80/131 (61.07%), Postives = 99/131 (75.57%), Query Frame = 1

		  
Query: 5   LPISLRSLSC---SILLVLIFIASINGF------DETG---SSDPSIKCGGCSPCGNPSC 64
           LPI  RSLSC   ++LL+LIFIA + G+      DETG   SSDP+IKCGGCSPCG+PSC
Sbjct: 3   LPIPQRSLSCFIPTLLLILIFIAPVYGYVQLRKLDETGLPGSSDPTIKCGGCSPCGHPSC 62

Query: 65  YLSPPPPPSPPPPPPPKKKSISSYCPPPPSSTGTGSGFVYMTAPPGELYPVVQNYSGTPP 124
           Y SPPPPP P PPPPPKK+S + YCPPPPSS    +GF+Y+TAPPGELYP+  +YSG+  
Sbjct: 63  YSSPPPPPPPSPPPPPKKQSYTPYCPPPPSS----AGFIYITAPPGELYPIDHSYSGSSR 122

[Close]

BLAST of Spo21193.1 vs. NCBI nr
Match: gi|359472877|ref|XP_003631207.1| (PREDICTED: chitin-binding lectin 1 [Vitis vinifera])

HSP 1 Score: 82.0 bits (201), Expect = 9.500e-13
Identity = 56/118 (47.46%), Postives = 70/118 (59.32%), Query Frame = 1

		  
Query: 15  SILLVLIFIAS-ING-----FDET---GSSDPSIKCGGCSPCGNPSCYLSPPPPPSPPPP 74
           ++ LV+  IA+ +NG      DE+   GS D  +KCGGCS C NP C  SPPPPP P PP
Sbjct: 15  TVFLVVAAIATPVNGSNSRKLDESPASGSPDAGVKCGGCSSCQNP-CNQSPPPPPPPSPP 74

Query: 75  PPPKKKSISSYCPPPPSSTGTGSGFVYMTAPPGELYPVVQNYSGTPPNLAAAINSLLG 124
           PPPKK   + YCPPPP      + F+Y+T PPG LYP+ Q+Y G   N    +  L G
Sbjct: 75  PPPKKPR-APYCPPPPPPP---ASFLYVTGPPGTLYPIDQDYGGAGRNFMVGLPILAG 127

[Close]

BLAST of Spo21193.1 vs. NCBI nr
Match: gi|697152911|ref|XP_009630694.1| (PREDICTED: mulatexin {ECO:0000303|PubMed:19476960}-like [Nicotiana tomentosiformis])

HSP 1 Score: 81.6 bits (200), Expect = 1.200e-12
Identity = 50/103 (48.54%), Postives = 60/103 (58.25%), Query Frame = 1

		  
Query: 40  KCGGCSPCGNPSCYLSPPPPPS--PPPPPPPKKKSISSYCPPPPSSTGTG--------SG 99
           KCGGC PC  P    SPPPPP   PPP PPP KK  S YCPPPPS  G G        S 
Sbjct: 32  KCGGC-PCNKPCVPPSPPPPPPVLPPPSPPPPKKPPSGYCPPPPSGGGGGGYVPDTPNSQ 91

Query: 100 FVYMTAPPGELYPVVQNYSGTPPNLAAAINSLLGGIIKGGISF 133
           ++YMT PPG LYPV  ++ G   + ++  + L+GG   G +SF
Sbjct: 92  YIYMTGPPGNLYPVDHDFGGAKRSFSSGFSLLIGGFFLGLLSF 133

[Close]

BLAST of Spo21193.1 vs. NCBI nr
Match: gi|460386306|ref|XP_004238840.1| (PREDICTED: mulatexin [Solanum lycopersicum])

HSP 1 Score: 78.6 bits (192), Expect = 1.100e-11
Identity = 53/135 (39.26%), Postives = 71/135 (52.59%), Query Frame = 1

		  
Query: 12  LSCSILLVLIFIASI---NGFDETGSSDPSIKCGGCSPCGNPSCYLSPPPPPSPPPPPPP 71
           +S  ++ +L F+ +I   NG ++    +   KCGGC PC  P    SPPPPP   PPPPP
Sbjct: 1   MSRFVIFLLFFVVAIPITNGLNQRKLDEGENKCGGC-PCNKPCIPPSPPPPPPSSPPPPP 60

Query: 72  KKKSISSY-CPPPPSSTGTGSG--------------FVYMTAPPGELYPVVQNYSGTPPN 129
            KK  S Y CPPPP S G G G              ++YMT PPG LYPV  ++ G   +
Sbjct: 61  PKKPPSGYDCPPPPYSGGGGGGGGGGSNIPYPPNSQYIYMTGPPGNLYPVDHDFGGAKRS 120

[Close]

BLAST of Spo21193.1 vs. NCBI nr
Match: gi|698544826|ref|XP_009767192.1| (PREDICTED: leucine-rich repeat extensin-like protein 6 [Nicotiana sylvestris])

HSP 1 Score: 77.8 bits (190), Expect = 1.800e-11
Identity = 57/135 (42.22%), Postives = 71/135 (52.59%), Query Frame = 1

		  
Query: 17  LLVLIFIASINGFDETGSSD-PSIKCGGCSPCGNPSCYLSPPPPPS--PPPPPPPKKKSI 76
           LL LI +   NG +     +    KCGGC PC  P    SPPPPP   PPP PPP KK  
Sbjct: 8   LLFLIAVPISNGLNPRKLDEVDENKCGGC-PCNKPCVPPSPPPPPPALPPPSPPPPKKPP 67

Query: 77  SSYCPPPP-----SSTGTGSG-----------FVYMTAPPGELYPVVQNYSGTPPNLAAA 133
           S+YCPPPP     S  G GSG           ++YMT PPG LYPV  ++ G   + ++ 
Sbjct: 68  SAYCPPPPYGGGGSGGGGGSGGGYVPDTPNSQYIYMTGPPGNLYPVDHDFGGAKRSFSSG 127

[Close]

BLAST of Spo21193.1 vs. UniProtKB/TrEMBL
Match: A0A0J8C2J1_BETVU (Uncharacterized protein OS=Beta vulgaris subsp. vulgaris GN=BVRB_6g144630 PE=4 SV=1)

HSP 1 Score: 142.1 bits (357), Expect = 5.400e-31
Identity = 80/131 (61.07%), Postives = 99/131 (75.57%), Query Frame = 1

		  
Query: 5   LPISLRSLSC---SILLVLIFIASINGF------DETG---SSDPSIKCGGCSPCGNPSC 64
           LPI  RSLSC   ++LL+LIFIA + G+      DETG   SSDP+IKCGGCSPCG+PSC
Sbjct: 3   LPIPQRSLSCFIPTLLLILIFIAPVYGYVQLRKLDETGLPGSSDPTIKCGGCSPCGHPSC 62

Query: 65  YLSPPPPPSPPPPPPPKKKSISSYCPPPPSSTGTGSGFVYMTAPPGELYPVVQNYSGTPP 124
           Y SPPPPP P PPPPPKK+S + YCPPPPSS    +GF+Y+TAPPGELYP+  +YSG+  
Sbjct: 63  YSSPPPPPPPSPPPPPKKQSYTPYCPPPPSS----AGFIYITAPPGELYPIDHSYSGSSR 122

[Close]

BLAST of Spo21193.1 vs. UniProtKB/TrEMBL
Match: A5B8N9_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_01s0011g04830 PE=4 SV=1)

HSP 1 Score: 82.0 bits (201), Expect = 6.700e-13
Identity = 56/118 (47.46%), Postives = 70/118 (59.32%), Query Frame = 1

		  
Query: 15  SILLVLIFIAS-ING-----FDET---GSSDPSIKCGGCSPCGNPSCYLSPPPPPSPPPP 74
           ++ LV+  IA+ +NG      DE+   GS D  +KCGGCS C NP C  SPPPPP P PP
Sbjct: 15  TVFLVVAAIATPVNGSNSRKLDESPASGSPDAGVKCGGCSSCQNP-CNQSPPPPPPPSPP 74

Query: 75  PPPKKKSISSYCPPPPSSTGTGSGFVYMTAPPGELYPVVQNYSGTPPNLAAAINSLLG 124
           PPPKK   + YCPPPP      + F+Y+T PPG LYP+ Q+Y G   N    +  L G
Sbjct: 75  PPPKKPR-APYCPPPPPPP---ASFLYVTGPPGTLYPIDQDYGGAGRNFMVGLPILAG 127

[Close]

BLAST of Spo21193.1 vs. UniProtKB/TrEMBL
Match: K4BWY5_SOLLC (Uncharacterized protein OS=Solanum lycopersicum PE=4 SV=1)

HSP 1 Score: 74.3 bits (181), Expect = 1.400e-10
Identity = 47/104 (45.19%), Postives = 56/104 (53.85%), Query Frame = 1

		  
Query: 40  KCGGCSPCGNPSCYLSPPPPPSPPPPPPPKKKSISSY-CPPPPSSTGTGSG--------- 99
           KCGGC PC  P    SPPPPP   PPPPP KK  S Y CPPPP S G G G         
Sbjct: 17  KCGGC-PCNKPCIPPSPPPPPPSSPPPPPPKKPPSGYDCPPPPYSGGGGGGGGGGSNIPY 76

Query: 100 -----FVYMTAPPGELYPVVQNYSGTPPNLAAAINSLLGGIIKG 129
                ++YMT PPG LYPV  ++ G   + ++  + L+GG   G
Sbjct: 77  PPNSQYIYMTGPPGNLYPVDHDFGGAKRSFSSGFSLLIGGFFLG 119

[Close]

BLAST of Spo21193.1 vs. UniProtKB/TrEMBL
Match: M1D058_SOLTU (Uncharacterized protein OS=Solanum tuberosum GN=PGSC0003DMG400030541 PE=4 SV=1)

HSP 1 Score: 74.3 bits (181), Expect = 1.400e-10
Identity = 56/139 (40.29%), Postives = 72/139 (51.80%), Query Frame = 1

		  
Query: 12  LSCSILLVLIFIASI---NGFDETGSSDPSIKCGGCSPCGNPSCYLS-PPPPPSPPPP-P 71
           +S  +  +L F+ +    NG +     +   KCGGC PC  P    S PPPPPSPPPP P
Sbjct: 1   MSRLVFFLLFFVVATPITNGLNPRKLDEGENKCGGC-PCNKPCIPPSPPPPPPSPPPPSP 60

Query: 72  PPKKKSISSY-CPPPPSSTGTGSG------------FVYMTAPPGELYPVVQNYSGTPPN 131
           PP KK  S Y CPPPP S G G G            ++YMT PPG LYPV  ++ G   +
Sbjct: 61  PPPKKPPSGYDCPPPPYSGGDGGGGGENIPYPPNSQYIYMTGPPGNLYPVDHDFGGAKRS 120

Query: 132 LAAAINSLLGGIIKGGISF 133
            ++    L+GG   G + F
Sbjct: 121 FSSGFPLLIGGFFLGLLYF 138

[Close]

BLAST of Spo21193.1 vs. UniProtKB/TrEMBL
Match: A0A0V0HCA2_SOLCH (Putative cytokinesis protein sepA-like OS=Solanum chacoense PE=4 SV=1)

HSP 1 Score: 73.9 bits (180), Expect = 1.800e-10
Identity = 55/134 (41.04%), Postives = 70/134 (52.24%), Query Frame = 1

		  
Query: 12  LSCSILLVLIFIASI---NGFDETGSSDPSIKCGGCSPCGNPSCYLSPPPPP-SPPPP-P 71
           +S  +  +L F+ +    NG +     +   KCGGC PC  P    SPPPPP SPPPP P
Sbjct: 1   MSRXVFFLLFFVVATPITNGLNPRKLDEGENKCGGC-PCNKPCIPPSPPPPPPSPPPPSP 60

Query: 72  PPKKKSISSY-CPPPPSSTGTGSG-----------FVYMTAPPGELYPVVQNYSGTPPNL 129
           PP KK  S Y CPPPP S G G G           ++YMT PPG LYPV  ++ G   + 
Sbjct: 61  PPPKKPPSGYNCPPPPYSGGGGGGGENIPYPPNSQYIYMTGPPGNLYPVDHDFGGAKRSF 120

[Close]

BLAST of Spo21193.1 vs. TAIR (Arabidopsis)
Match: AT1G23040.1 (hydroxyproline-rich glycoprotein family protein)

HSP 1 Score: 56.6 bits (135), Expect = 1.500e-8
Identity = 46/118 (38.98%), Postives = 59/118 (50.00%), Query Frame = 1

		  
Query: 26  INGFDETGSSDPSIKCGGCSPCG-NPSCYLSPPPP----PSPPPP--------PPPKKKS 85
           ING   + +S  + K     P   +PSC  +PPPP    PSPPPP        PPP  K 
Sbjct: 28  INGSSSSDASLEARKLDEVDPIKCSPSCIQNPPPPSPPPPSPPPPACPPPPALPPPPPKK 87

Query: 86  ISSYCPPPPSSTGTGSGFVYMTAPPGELYPVVQNYSGTPPNLAAAINSLLGGIIKGGI 131
           +SSYCPPPP +      F+Y+T PPG LYPV + +          +   L G+I  GI
Sbjct: 88  VSSYCPPPPPAN-----FLYITGPPGNLYPVDEQFGAAAGKSFMVVK--LSGLIAFGI 138

[Close]

BLAST of Spo21193.1 vs. TAIR (Arabidopsis)
Match: AT1G70990.1 (proline-rich family protein)

HSP 1 Score: 50.4 bits (119), Expect = 1.100e-6
Identity = 47/132 (35.61%), Postives = 67/132 (50.76%), Query Frame = 1

		  
Query: 10  RSLSCSILLVLIFIAS---INGFDETGSSDPSIKCGGCSPCGNPSCYLSPPPPPSPPP-- 69
           ++L+ ++L  ++F+     IN  D + +         C+PC       SPPPP  PPP  
Sbjct: 47  KALAATLLTTVVFLTFPMIINASDSSTNRKLEEDPIKCTPCLQNIPPPSPPPPSPPPPSQ 106

Query: 70  --PPPPKKKSI--SSYCPPPPSSTGTGSGFVYMTAPPGELYPVVQNYSGTPPNLAAAINS 129
             PPPP   S    SYCPPPPS+      ++YMT PPGELYP+ Q + G     +  +  
Sbjct: 107 ACPPPPLPPSPPKKSYCPPPPST------YIYMTGPPGELYPIDQQF-GAAVTKSFTVVK 166

Query: 130 LLGGIIKGGISF 133
           + G I  G +SF
Sbjct: 167 ISGLIAFGVMSF 171

The following BLAST results are available for this feature:

BLAST of Spo21193.1 vs. NCBI nr
BLAST of Spo21193.1 vs. UniProtKB/TrEMBL
BLAST of Spo21193.1 vs. ExPASy Swiss-Prot
BLAST of Spo21193.1 vs. TAIR (Arabidopsis)

BLAST of Spo21193.1 vs. NCBI nr
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. NCBI nr)
Total hits: 5

Position :

Zoom :

x 1


Match Name	E-value	Identity	Description
gi\|870856329\|gb\|KMT07985.1\|	7.8e-31	61.0	hypothetical protein BVRB_6g14...	[more]
gi\|359472877\|ref\|XP_003631207.1\|	9.5e-13	47.4	PREDICTED: chitin-binding lect...	[more]
gi\|697152911\|ref\|XP_009630694.1\|	1.2e-12	48.5	PREDICTED: mulatexin {ECO:0000...	[more]
gi\|460386306\|ref\|XP_004238840.1\|	1.1e-11	39.2	PREDICTED: mulatexin [Solanum ...	[more]
gi\|698544826\|ref\|XP_009767192.1\|	1.8e-11	42.2	PREDICTED: leucine-rich repeat...	[more]

BLAST of Spo21193.1 vs. UniProtKB/TrEMBL
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. UniprotKB/TrEMBL)
Total hits: 5

Position :

Zoom :

x 1


Match Name	E-value	Identity	Description
A0A0J8C2J1_BETVU	5.4e-31	61.0	Uncharacterized protein OS=Bet...	[more]
A5B8N9_VITVI	6.7e-13	47.4	Putative uncharacterized prote...	[more]
K4BWY5_SOLLC	1.4e-10	45.1	Uncharacterized protein OS=Sol...	[more]
M1D058_SOLTU	1.4e-10	40.2	Uncharacterized protein OS=Sol...	[more]
A0A0V0HCA2_SOLCH	1.8e-10	41.0	Putative cytokinesis protein s...	[more]

BLAST of Spo21193.1 vs. ExPASy Swiss-Prot
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. ExPASy SwissProt)
Total hits: 0

Position :

Zoom :

x 1


Match Name	E-value	Identity	Description

BLAST of Spo21193.1 vs. TAIR (Arabidopsis)
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. TAIR)
Total hits: 2

Position :

Zoom :

x 1


Match Name	E-value	Identity	Description
AT1G23040.1	1.5e-8	38.9	hydroxyproline-rich glycoprote...	[more]
AT1G70990.1	1.1e-6	35.6	proline-rich family protein	[more]

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006446	regulation of translational initiation
biological_process	GO:0035435	phosphate ion transmembrane transport
biological_process	GO:0006635	fatty acid beta-oxidation
biological_process	GO:0001676	long-chain fatty acid metabolic process
biological_process	GO:0043248	proteasome assembly
biological_process	GO:0043161	proteasome-mediated ubiquitin-dependent protein catabolic process
biological_process	GO:0009735	response to cytokinin
biological_process	GO:0051788	response to misfolded protein
biological_process	GO:0048767	root hair elongation
biological_process	GO:0055114	oxidation-reduction process
biological_process	GO:0006351	transcription, DNA-templated
biological_process	GO:0050789	regulation of biological process
biological_process	GO:0048856	anatomical structure development
biological_process	GO:0006637	acyl-CoA metabolic process
biological_process	GO:0008152	metabolic process
cellular_component	GO:0005886	plasma membrane
cellular_component	GO:0000785	chromatin
cellular_component	GO:0005840	ribosome
cellular_component	GO:0005777	peroxisome
cellular_component	GO:0005634	nucleus
cellular_component	GO:0016020	membrane
molecular_function	GO:0003677	DNA binding
molecular_function	GO:0003682	chromatin binding
molecular_function	GO:0003824	catalytic activity
molecular_function	GO:0015415	ATPase-coupled phosphate ion transmembrane transporter activity
molecular_function	GO:0046577	long-chain-alcohol oxidase activity
molecular_function	GO:0043565	sequence-specific DNA binding
molecular_function	GO:0005524	ATP binding
molecular_function	GO:0050660	flavin adenine dinucleotide binding
molecular_function	GO:0003997	acyl-CoA oxidase activity
molecular_function	GO:0003995	acyl-CoA dehydrogenase activity
molecular_function	GO:0003743	translation initiation factor activity

RNA-Seq Expression

Co-expression


Gene	r value	Expression
Spo03828	0.72	Barchart \| Table
Spo30001	0.70	Barchart \| Table
Spo03421	0.70	Barchart \| Table
Spo09717	0.68	Barchart \| Table
Spo05898	0.68	Barchart \| Table
Spo13160	0.68	Barchart \| Table
Spo25929	0.68	Barchart \| Table
Spo12189	0.67	Barchart \| Table
Spo02702	0.66	Barchart \| Table
Spo22434	0.66	Barchart \| Table
Spo25621	0.66	Barchart \| Table
Spo03551	0.65	Barchart \| Table
Spo01759	0.65	Barchart \| Table