Spo20469 (gene) | SpinachBase

Overview


Name	Spo20469
Type	gene
Organism	Spinacia oleracea (Spinach)
Description	Chaperonin 21
Location	Super_scaffold_213 : 3725025 .. 3731499 (-)

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDSexonthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGAGATCATTAAGTTTATTCTTGATACAAGAGGTGAATGAGAAAGAAAATATATTTATTTATGTACCCTTTTTGTTTTAACTGTTTTAATAAATATGACACCGAATGGGAAATAACAAATCTTTCCATCATTAATTATAATTAGAAGGATATCTATAAGCTCTATTTTGATGATAATTGTCTACCATATTTCATATAAATTTATGTTTAGATTATAAATCGTGCATCGCACGGGTATTATACTAGTTTTACTTCTATTGTCGCCCATATTCCTAAACTATTTAATTAATTTTGGAGTTTTTTGGAGTCCATCTACCAAATTAATATGAGCTTGAGAGTAATATTCAACAAATGGCTCATTTCATATTTGACTTAGCCGGGAAAAGTAATAGAAAATCCGTATCATCTTAGAGATGTTTTACATAGACTCTTCACTTGTATATTCAACCCTTTAACCCCGATTTATTGTTTTTATCGTTTGTTGGATTTTTTCCCCCTTGATACTTGTCACTGCTATGCTCTTGCCCGCAGGACTAAGATTAATTTTTTTGGTTGATTATTGGATTATTTTTTAGTTTTTTTTTCTGTTTCTAGATAACATTTATATGGCATTGACAAAATGAATGAACAATCTATGTTCTTGTGAAATTGGTGATATTATCATTCATTTGAAAATTATAACATTTGAGTAGACGGAATCAGACATGCCATTAATAAACGTATTGATGATGCATTTGTATTCTCTATAACTTACTATTGGGAGAGAGGGAGGGAAACGTATTGATGATGCATTTGTATTCTCTATAACTTACTATTGGGAGAGAGGGAGGGTAGACAAAATTAGGTGACTAAACAAAAGTGGCAAGAGAAGTGCCTAAACAAAAGTGGCCGGTTTATTGCGTGTATATGTCATGTTCATATCAGATAACTATCATGTATGTGTCAAGTTTGGATCGGTGAGTCTTAGGTTCGGGTCAAGTTCAGATCGGACGTACCTGAGATTTGGGTCAATTGCGGATTAAGTTTATGGTTGGACTTATCCGACGTATATGAGATTAAGTTTGTGGTTGGAGTTAGTTCACGATCAAACGGGATCACTTTATTATTTCTAAGAAAAATACTTTTTCGGCTTTTATTACCCTGTCTTCAAATTATTTAATAAAACATGAATACATTTTCACACATCGAACTAAATTTACATTGGTAATAGTTTAATTTGGGTTACTTGAGCCAGATTAATAATGAGTAATTAAATCGAGGTCAGGTTAAATATGGTCTATTTTAGTATTTTATTTCAGGTGATTTTAGGTTACCAGGTCAATCTAGGCCGGATTATAATTTCGGATTTCAAATATGATTGGGTCAGATAGACAACAATTCGGTTGAATTCGGATTCGGGTTGTCACGTGTCGGATTAAATCGCATATCCAATTTTATCCGTTTGGGTCGATTATGATTGTTTTTTATCCGTTGGAGTCTATTATGATTGTTATCAGGTAAATATTGGTTTTCGAATTGCTATTGGATGTGGGTTCCGTTCGGTTAAAAGCTATCGGTTGCAAATTGGGTTGCGGGTTTCCTCGGATTGCTAGCGATTCGAGTTTGGATCTTGAATTAACGAGTTAAATCAAATTTCGAGTCAACGTTCAATCAATCAGGTCAATTACGAGATCCTTATTTCTCGGATATAGTATGTTCAAATGTCGGTTGATTTCGATCGATTTCTCGACCGGGCAACTTTTTGACGGCCCCATGCAAATATCCAAGTAAAGAAAGGATGAAATGAGAATTGGGCAACAAATACAAGCCCATCCAATGATCATGACCCATCAACTCAAACCACCCATCTAACGTTACAATTCTAGAACTCTCCTTAACCAATTTAAAACCAATAAACAATCCCTTGAAACTTCTAGGGTTTCATTTCATTATCCTTCCAATCCTTCACAGTTTCTCTCTCGCTCAGCTTACAGTCTTCACACTCTCCTCACATTTCTACTCATCAATTAAAGAGGTAATTAATCAGTGCTTACATTTCAATTAAAAGTTCAATTATCTGGGTTTCTGTATATTCAACAATTTTATATTCATTCTTGCTAATTGGTAAATGGGTATTTTTTTCCGGTAATTTTGAATTATGGGTTGTATTATATAGAATATTTCCTTCATCTTTGCCGGTGGATAAAATGCTGAATTTTAATCTTATTTGTTCATTCTTGCTAATGGGTTAATGGGATTTTAAAATCTAATTTGTAATTGTGGGGAGTAATGTACAGTAAATGCTATTCATTTTTGCTAACGGCATAATGGGGTTGAATGGATTTTGAGCTAATTTTGAGTTTTTGGTAGTTTTGTGGTAGATAGTGGATTAATGGGATAAGATGGAAAACAAATTCTAAATATCGATCTTATTTGTATATTATTGCTAATGGGTTAGTGGCATTTTAAAATTAATGTGTAATTGTGGGGAGTAATGTACAGTAAATGCTCTTCATTTTTTGCTAACGGCATAATGGGGTTGAATGGGATTTTGAGCTAATTTTGAGTTTGTGGTAGTTTTGTGTAGTTAGTGGATTAATGGATAAGATGGAAAACAAATTCTGGGTAGCTAATTTTGAATTGTGTAAGTAGGAAAATGGCAGCAGCTCAGCTTACAGCAGCAACTGTATCGAGCAGGGGTTTACCCACTTTTGAAGGGCTTAGGTCTTCATCGCTCAAGGTTGCTGCTTTTGTGCCGTCGAGACAAGGGCTTAGCCAGAGGTCTTTCAGCCCTCTTGTTGTTAAAGCTGCCACTGTTGTTGCCCCCAAGGTACTTTTGCTTCGTGTTGATGTAGCTATTTTTCTGCAAAACTTAGTCATTGCCTAAGAATTGGTGCTGTTGTTGTTCGAGGCTTATTGCTTAAGAATTCAGGTTTTGTTGTTGCATGGTTTACCTGTTTTTATTGATCATAGCTTGTAGTACGACTGTACGAGGCTGGTGTGGTATACATTGTATATGTTGTTGCCTTGTTGGTATCAATCAAGGGTCATGTAGAAAGGATTTCTCTTGAATGTACTGTTCGAGTGATTACATTTGATTGGAGAACGATTGGGGATTAAGTATTCAATTCAATGTTTTGTGGAAGAAATGATGGAAGTATAAAAATGGTTCTGCTGTATTTTCTACTCTGGTCATTATAATGGATGGAGTAATAATTGGAGATTAGTATTAAATTTGATGTATTGTGGTGACATTGCTGTAGAATTTTGTTCAAAGTCTGATGCTTTTATGTTTATTATTTTACCCCTTGTGAGTTTGGTATAAGTTCATGTGATTCTAGACTTCTAGTTGTGCAATCTAGAGTGTTAGTGGACTATGGTCTTGAAATTCTTATTGTTTAGATGCAAAACAAGAGTTACTTGATTATGATGTTCAAGGAATGGTCTATCTACTCGTGTAATTGTAGATTTTTTTGTCAATCATGTTTTTGGCAAATCAAGGAATCATTTAGTTCTTGGGTGTTTTTGTTAATGACAAAGGCCAATTGTGTGCGAGGCAATCACTGGATACAAATTGCTCCCTTCCATGAGGACATATTCTCCCATCATTTGTGTAGATATCCTATCAATTACAATACAGCATCTTGCTTATGCTGCTACCCTGCGTTTATACTTATAAGTGGCGTTTCAACTTATATCTGGTGTGATTTGGTGTTGACAAGAGTTCTTGCTATGGCAATCATTATTAAGGTTCTTGACGCTGAGGTCTTTTGGTCTTTGTATGTATGATTATAGTCACCTAATCATCTATGGTTTATGAATGTTCTTTCTTGACGTTTCTAATTAGGAACTCTGAATTATCTCTTTTTACCAAGTCCAATAACTATTTATAGGAGATAATACTAAAACTTAGTTTATACTCCCCCATTTCTTTAATAAGCCATCCATGATCCATGTACTCAGAGGTTGAATTCTGACTGTTGATTATTTAAAAAAAATATGATTATGGTATGCAGTGTAAGTGTAGAATTACTAGTGAAGTGGGAGCATTTATTATCTCTAGTTCTTGGAGACTGCAAAAGTCCACTAGTGATATGAATAACATACAGCGAATGCTATTGGATAGCAATGATTGTTTGATAAAACTGGGCATATTATCATTTCCTATTATCATGAAAACAAGATAATATGACTGATTATAATGATTCAAATAAACAGTATACCTCAATCAAGCCTACCGCTGATAGAGTGTTAATCAAGATCAAGGAAGCAGAGGAGAAGACTTCTGGTGGTATTTTGCTACCCTCAACAGCTGTATCTAAGCCCCAATCTGGTGAAGTGGTAGCTATTGGAGAAGGCAGGACAATTGGGAAGAACAAAGTAGAAATTGGTGTCAAGGTAACTGTTTTGTTTCTGTATGTTCAGTGCTAAAACTGCTTAAAAAATTTGTCAGCTGCTTAAAACTGTTTGGTTGACCAATAGTTTATCAATCTACTTTATTTGGTGCAGACTGGTACTCAGGTAGTGTACTCCAAGTATGCAGGGACTGAGCTGGAGTTTAATGGGTCAAACCATTTACTACTGAAGGAAGACGACATTATTGGCGTTCTTGAGACAGATGAAATTAAAGATCTTAAGCCTCTGAATGAGAGAGTTCTCATTAAGGTCAGTGCTATATGATCTTTTGTTGATATGTGGATATCTCCCTTGATAATCTTACCACCCACTGGATATGTACTACATCCTCCGATTTTTTTACTTGCACCATTTGCAATGTTACATTATTCATACACTTTTTTGTCATTTTTTTGTGATTAATACATAATAAATTATATAGTTAGGTGGGAACTTGTTAGATTCGTGTCGATATATATTTTTAAAATATCAACCTTTTATAATTTTAGCTAATGTATAATTAGAGATATTATTAATGGCTAGAGAGTTGTATTGGCAAACGTGAAACATTAAATGGTGTAAGTAAAAAAAAAAAACTGGAGGCAGTAATCGCAGTATTATTCTTATCCTTATCAGCCACTGGATATGTACCATCTTTACATGTATTTGATTAGTGATTAGATATATCATTGCAATACAAGAAAATTGTGTGAGACATTTGCTGGGTTTGGCTTAATGACTTAATCAGATGGTAAATTAGTTGACTGCAAAAGTGTTTCAAAGAGTGTTAACATGGTGTAGTATGGAGGTCACAAGGTAGATACGGAGTAGTAAACAATTGCTTATATGCGGCATCCTCTACTAAATGTTTGTATATATACCATTTTCTTCCTAACGGTGTGCAAGCATAGCTTTTACATGGAGCTTATATATACTTCTTTTTTCTCTGTTTATTTCGCCTGTTTGTGGATTTAGGCCCTGTTCTTTTGAGCTCAACTGAAATTAATTGAATTGAATGCTCCTGAACTGAACTGAATTGAAAAATAAGCCCTGAAGCTGAAATTAAGCGAAAAAGAACAAGGCAAATAGAAGCTGAATGCATAGTTGATGAATGTTATGGGTGTCAAATTTTCAGGTAGCTGAGGCTGAAGAGAAAACCGCAGGAGGTTTATTATTGACAGAAGCATCCAAGGAGAAGCCCTCAGTTGGCACTGTAATCATTCATCCGCATTTAGTTTTGACTTAATGACTACTTAATCAGATGGTTAATCCCCCCTCCCCCCCCCCCTCTTTTTTTCTTCTTATAATCCTCATTATTACCTTTTGTCTTGGTGTACCAGGNTCCCCCCCCCCCTCTTTTTTTCTTCTTATAATCCTCATTATTACCTTTTGTCTTGGTGTACCAGGTGATCGCGGTTGGGTCTGGTCCATTGGACGAGGAAGGCAATAGGAAACCATTGTCAGTGGCAGCAGGGAACACAGTGATGTATTCCAAGTATGCAGGAAACGAGTTCAAAGGAAAAGATGGATCTGACTACATAGTTCTAAGGGCGTCCGACGTTATGGCTGTTCTTTCCTCTTAATCGCGTATCTTGAAACTATGTAAAAGGAATGTGTTTTAGGTGGTAATGATTTTTGTAGCAACATGAGTGTTGAAGTGTGTTCATATAGCTTGCAATTTTGATTGTTGAGTTTCACATTTGGCTTCAGTTTAATGTATTATTGGGCCCGAAAATTGGGTCAGTTGAAACACGGCAGACGGGTTCTGAATTTGAGGGCTGGGCTCAATGTCATGATGAGTAGGCAGTAGTCATGCATTTGTTTAGTACATGGTTGACAGGGAGATGGAAATTTTGTTCTGAAAATAAAGTGTGGAGCATGCTTCTTTAAAGTGGCTCTTTGGAAAAATCAGATGATATTTATCTTCTAGTACTCGTACTGTCGTACTTATTAAAGAATAACTAGCTTTTGAGCCCGTTCATAGAACGGGCGGTTGTATAGTGGTTGTTCAGATGTCTTTTGATGTTTTAATTATTGAGTACTTGTGAATTTTGGTAATATATGAATTAAATAGAGGTGTAATTTGAAAGTTGGAAAAATA

mRNA sequence

ATGAGATCATTAAGTTTATTCTTGATACAAGAGGGTTTCATTTCATTATCCTTCCAATCCTTCACAGTTTCTCTCTCGCTCAGCTTACAGTCTTCACACTCTCCTCACATTTCTACTCATCAATTAAAGAGGAAAATGGCAGCAGCTCAGCTTACAGCAGCAACTGTATCGAGCAGGGGTTTACCCACTTTTGAAGGGCTTAGGTCTTCATCGCTCAAGGTTGCTGCTTTTGTGCCGTCGAGACAAGGGCTTAGCCAGAGGTCTTTCAGCCCTCTTGTTGTTAAAGCTGCCACTGTTGTTGCCCCCAAGTATACCTCAATCAAGCCTACCGCTGATAGAGTGTTAATCAAGATCAAGGAAGCAGAGGAGAAGACTTCTGGTGGTATTTTGCTACCCTCAACAGCTGTATCTAAGCCCCAATCTGGTGAAGTGGTAGCTATTGGAGAAGGCAGGACAATTGGGAAGAACAAAGTAGAAATTGGTGTCAAGACTGGTACTCAGGTAGTGTACTCCAAGTATGCAGGGACTGAGCTGGAGTTTAATGGGTCAAACCATTTACTACTGAAGGAAGACGACATTATTGGCGTTCTTGAGACAGATGAAATTAAAGATCTTAAGCCTCTGAATGAGAGAGTTCTCATTAAGGTAGCTGAGGCTGAAGAGAAAACCGCAGGAGGTTTATTATTGACAGAAGCATCCAAGGAGAAGCCCTCAGTTGGCACTGTGATCGCGGTTGGGTCTGGTCCATTGGACGAGGAAGGCAATAGGAAACCATTGTCAGTGGCAGCAGGGAACACAGTGATGTATTCCAAGTATGCAGGAAACGAGTTCAAAGGAAAAGATGGATCTGACTACATAGTTCTAAGGGCGTCCGACGTTATGGCTGTTCTTTCCTCTTAATCGCGTATCTTGAAACTATGTAAAAGGAATGTGTTTTAGGTGGTAATGATTTTTGTAGCAACATGAGTGTTGAAGTGTGTTCATATAGCTTGCAATTTTGATTGTTGAGTTTCACATTTGGCTTCAGTTTAATGTATTATTGGGCCCGAAAATTGGGTCAGTTGAAACACGGCAGACGGGTTCTGAATTTGAGGGCTGGGCTCAATGTCATGATGAGTAGGCAGTAGTCATGCATTTGTTTAGTACATGGTTGACAGGGAGATGGAAATTTTGTTCTGAAAATAAAGTGTGGAGCATGCTTCTTTAAAGTGGCTCTTTGGAAAAATCAGATGATATTTATCTTCTAGTACTCGTACTGTCGTACTTATTAAAGAATAACTAGCTTTTGAGCCCGTTCATAGAACGGGCGGTTGTATAGTGGTTGTTCAGATGTCTTTTGATGTTTTAATTATTGAGTACTTGTGAATTTTGGTAATATATGAATTAAATAGAGGTGTAATTTGAAAGTTGGAAAAATA

Coding sequence (CDS)

ATGAGATCATTAAGTTTATTCTTGATACAAGAGGGTTTCATTTCATTATCCTTCCAATCCTTCACAGTTTCTCTCTCGCTCAGCTTACAGTCTTCACACTCTCCTCACATTTCTACTCATCAATTAAAGAGGAAAATGGCAGCAGCTCAGCTTACAGCAGCAACTGTATCGAGCAGGGGTTTACCCACTTTTGAAGGGCTTAGGTCTTCATCGCTCAAGGTTGCTGCTTTTGTGCCGTCGAGACAAGGGCTTAGCCAGAGGTCTTTCAGCCCTCTTGTTGTTAAAGCTGCCACTGTTGTTGCCCCCAAGTATACCTCAATCAAGCCTACCGCTGATAGAGTGTTAATCAAGATCAAGGAAGCAGAGGAGAAGACTTCTGGTGGTATTTTGCTACCCTCAACAGCTGTATCTAAGCCCCAATCTGGTGAAGTGGTAGCTATTGGAGAAGGCAGGACAATTGGGAAGAACAAAGTAGAAATTGGTGTCAAGACTGGTACTCAGGTAGTGTACTCCAAGTATGCAGGGACTGAGCTGGAGTTTAATGGGTCAAACCATTTACTACTGAAGGAAGACGACATTATTGGCGTTCTTGAGACAGATGAAATTAAAGATCTTAAGCCTCTGAATGAGAGAGTTCTCATTAAGGTAGCTGAGGCTGAAGAGAAAACCGCAGGAGGTTTATTATTGACAGAAGCATCCAAGGAGAAGCCCTCAGTTGGCACTGTGATCGCGGTTGGGTCTGGTCCATTGGACGAGGAAGGCAATAGGAAACCATTGTCAGTGGCAGCAGGGAACACAGTGATGTATTCCAAGTATGCAGGAAACGAGTTCAAAGGAAAAGATGGATCTGACTACATAGTTCTAAGGGCGTCCGACGTTATGGCTGTTCTTTCCTCTTAA

Protein sequence

MRSLSLFLIQEGFISLSFQSFTVSLSLSLQSSHSPHISTHQLKRKMAAAQLTAATVSSRGLPTFEGLRSSSLKVAAFVPSRQGLSQRSFSPLVVKAATVVAPKYTSIKPTADRVLIKIKEAEEKTSGGILLPSTAVSKPQSGEVVAIGEGRTIGKNKVEIGVKTGTQVVYSKYAGTELEFNGSNHLLLKEDDIIGVLETDEIKDLKPLNERVLIKVAEAEEKTAGGLLLTEASKEKPSVGTVIAVGSGPLDEEGNRKPLSVAAGNTVMYSKYAGNEFKGKDGSDYIVLRASDVMAVLSS

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Spo20469.1	Spo20469.1	mRNA

Homology

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BLAST of Spo20469.1 vs. NCBI nr
Match: gi|902233438|gb|KNA23058.1| (hypothetical protein SOVF_028130 [Spinacia oleracea])

HSP 1 Score: 473.0 bits (1216), Expect = 3.800e-130
Identity = 254/254 (100.00%), Postives = 254/254 (100.00%), Query Frame = 1

		  
Query: 46  MAAAQLTAATVSSRGLPTFEGLRSSSLKVAAFVPSRQGLSQRSFSPLVVKAATVVAPKYT 105
           MAAAQLTAATVSSRGLPTFEGLRSSSLKVAAFVPSRQGLSQRSFSPLVVKAATVVAPKYT
Sbjct: 1   MAAAQLTAATVSSRGLPTFEGLRSSSLKVAAFVPSRQGLSQRSFSPLVVKAATVVAPKYT 60

Query: 106 SIKPTADRVLIKIKEAEEKTSGGILLPSTAVSKPQSGEVVAIGEGRTIGKNKVEIGVKTG 165
           SIKPTADRVLIKIKEAEEKTSGGILLPSTAVSKPQSGEVVAIGEGRTIGKNKVEIGVKTG
Sbjct: 61  SIKPTADRVLIKIKEAEEKTSGGILLPSTAVSKPQSGEVVAIGEGRTIGKNKVEIGVKTG 120

Query: 166 TQVVYSKYAGTELEFNGSNHLLLKEDDIIGVLETDEIKDLKPLNERVLIKVAEAEEKTAG 225
           TQVVYSKYAGTELEFNGSNHLLLKEDDIIGVLETDEIKDLKPLNERVLIKVAEAEEKTAG
Sbjct: 121 TQVVYSKYAGTELEFNGSNHLLLKEDDIIGVLETDEIKDLKPLNERVLIKVAEAEEKTAG 180

Query: 226 GLLLTEASKEKPSVGTVIAVGSGPLDEEGNRKPLSVAAGNTVMYSKYAGNEFKGKDGSDY 285
           GLLLTEASKEKPSVGTVIAVGSGPLDEEGNRKPLSVAAGNTVMYSKYAGNEFKGKDGSDY
Sbjct: 181 GLLLTEASKEKPSVGTVIAVGSGPLDEEGNRKPLSVAAGNTVMYSKYAGNEFKGKDGSDY 240

Query: 286 IVLRASDVMAVLSS 300
           IVLRASDVMAVLSS
Sbjct: 241 IVLRASDVMAVLSS 254

[Close]

BLAST of Spo20469.1 vs. NCBI nr
Match: gi|731352417|ref|XP_010687539.1| (PREDICTED: 20 kDa chaperonin, chloroplastic [Beta vulgaris subsp. vulgaris])

HSP 1 Score: 428.3 bits (1100), Expect = 1.100e-116
Identity = 222/254 (87.40%), Postives = 242/254 (95.28%), Query Frame = 1

		  
Query: 46  MAAAQLTAATVSSRGLPTFEGLRSSSLKVAAFVPSRQGLSQRSFSPLVVKAATVVAPKYT 105
           MAAAQLTA +VSSRGLPTFEGLR S++K+AAF P RQGLSQR F PLVVKAATVVAPKYT
Sbjct: 1   MAAAQLTATSVSSRGLPTFEGLRPSAIKIAAFAPLRQGLSQRCFRPLVVKAATVVAPKYT 60

Query: 106 SIKPTADRVLIKIKEAEEKTSGGILLPSTAVSKPQSGEVVAIGEGRTIGKNKVEIGVKTG 165
           +I P ADRVLIKIKEAEEKTSGGILLPSTA+SKPQ GEVVA+GEGRTIGK+K+EIGVKTG
Sbjct: 61  TITPLADRVLIKIKEAEEKTSGGILLPSTALSKPQYGEVVAVGEGRTIGKSKIEIGVKTG 120

Query: 166 TQVVYSKYAGTELEFNGSNHLLLKEDDIIGVLETDEIKDLKPLNERVLIKVAEAEEKTAG 225
           +QVVYSKYAGTELEFNGSNHLL+KEDDI+G+LETD+IK+LKP+NERVLIKVAEAE+ TAG
Sbjct: 121 SQVVYSKYAGTELEFNGSNHLLMKEDDIVGILETDDIKELKPMNERVLIKVAEAEQTTAG 180

Query: 226 GLLLTEASKEKPSVGTVIAVGSGPLDEEGNRKPLSVAAGNTVMYSKYAGNEFKGKDGSDY 285
           GLLLTEASKEKPSVG+VIAVG GPLDEEGNRKPLSV+ GNTVMYSKYAGNEFKGKDGSDY
Sbjct: 181 GLLLTEASKEKPSVGSVIAVGPGPLDEEGNRKPLSVSPGNTVMYSKYAGNEFKGKDGSDY 240

Query: 286 IVLRASDVMAVLSS 300
           IVLR+SDVMAVLSS
Sbjct: 241 IVLRSSDVMAVLSS 254

[Close]

BLAST of Spo20469.1 vs. NCBI nr
Match: gi|702303436|ref|XP_010049377.1| (PREDICTED: 20 kDa chaperonin, chloroplastic [Eucalyptus grandis])

HSP 1 Score: 381.7 bits (979), Expect = 1.200e-102
Identity = 197/254 (77.56%), Postives = 229/254 (90.16%), Query Frame = 1

		  
Query: 46  MAAAQLTAATVSSRGLPTFEGLRSSSLKVAAFVPSRQG-LSQRSFSPLVVKAATVVAPKY 105
           MA+ QLTA   S+R +P+F+GL+ S++K A   P + G L+QRSF  LVV+AATVVAPKY
Sbjct: 1   MASGQLTAPAFSARLVPSFDGLKPSTVKFAFVGPFKGGSLAQRSFRGLVVRAATVVAPKY 60

Query: 106 TSIKPTADRVLIKIKEAEEKTSGGILLPSTAVSKPQSGEVVAIGEGRTIGKNKVEIGVKT 165
           TS+KP  DRVL+KIK AEEKT GGILLPSTA SKPQ GEVVA+GEGRTIGK++++I VKT
Sbjct: 61  TSLKPLGDRVLVKIKTAEEKTQGGILLPSTAQSKPQGGEVVAVGEGRTIGKSQIDISVKT 120

Query: 166 GTQVVYSKYAGTELEFNGSNHLLLKEDDIIGVLETDEIKDLKPLNERVLIKVAEAEEKTA 225
           G+QV+YSKYAGTELEFNGSNHL+LKEDDI+G+LET+++KDLKPLNER+LIKVAEAE+KTA
Sbjct: 121 GSQVIYSKYAGTELEFNGSNHLILKEDDILGILETEDVKDLKPLNERILIKVAEAEQKTA 180

Query: 226 GGLLLTEASKEKPSVGTVIAVGSGPLDEEGNRKPLSVAAGNTVMYSKYAGNEFKGKDGSD 285
           GGLLLTEASKEKPS+GTVIAVG GPLDEEGNRKPL+V+AGNTVMYSKYAGN+FK  DGSD
Sbjct: 181 GGLLLTEASKEKPSIGTVIAVGPGPLDEEGNRKPLTVSAGNTVMYSKYAGNDFKNSDGSD 240

Query: 286 YIVLRASDVMAVLS 299
           YIVLRASDVMAVLS
Sbjct: 241 YIVLRASDVMAVLS 254

[Close]

BLAST of Spo20469.1 vs. NCBI nr
Match: gi|747063189|ref|XP_011078133.1| (PREDICTED: 20 kDa chaperonin, chloroplastic-like [Sesamum indicum])

HSP 1 Score: 378.6 bits (971), Expect = 9.800e-102
Identity = 198/257 (77.04%), Postives = 232/257 (90.27%), Query Frame = 1

		  
Query: 46  MAAAQLTAA--TVSSRGLPTFEGLRSSS-LKVAAFVPSRQ-GLSQRSFSPLVVKAATVVA 105
           MA  QLT+A  ++S++   +FEGLR+SS +KV++F P +Q GLS RSF  LVVKAAT VA
Sbjct: 1   MATVQLTSAASSISAKRFVSFEGLRASSAVKVSSFSPLKQNGLSLRSFRGLVVKAATAVA 60

Query: 106 PKYTSIKPTADRVLIKIKEAEEKTSGGILLPSTAVSKPQSGEVVAIGEGRTIGKNKVEIG 165
           PKYTS+KP  DRVL+KIK AEEKT GGILLP+TA SKPQ+GEVVA+GEGRT+GKNKVEIG
Sbjct: 61  PKYTSLKPLGDRVLVKIKTAEEKTLGGILLPTTAQSKPQAGEVVAVGEGRTVGKNKVEIG 120

Query: 166 VKTGTQVVYSKYAGTELEFNGSNHLLLKEDDIIGVLETDEIKDLKPLNERVLIKVAEAEE 225
           VKTGTQVVYSKYAGTE+EF+GS+HL+LKEDDI+G+L+TD++KD+KPLN+RVLIKVAEAEE
Sbjct: 121 VKTGTQVVYSKYAGTEVEFSGSSHLILKEDDIVGILDTDDVKDMKPLNDRVLIKVAEAEE 180

Query: 226 KTAGGLLLTEASKEKPSVGTVIAVGSGPLDEEGNRKPLSVAAGNTVMYSKYAGNEFKGKD 285
           KTAGGL LT+ASKEKPS+GTV+AVG GPLDEEGNRKPLSVA GNTV+YSKYAGN+FKG D
Sbjct: 181 KTAGGLYLTDASKEKPSIGTVVAVGPGPLDEEGNRKPLSVAPGNTVLYSKYAGNDFKGAD 240

Query: 286 GSDYIVLRASDVMAVLS 299
           GSDYI LRASDVMA+LS
Sbjct: 241 GSDYIALRASDVMAILS 257

[Close]

BLAST of Spo20469.1 vs. NCBI nr
Match: gi|703073874|ref|XP_010089662.1| (20 kDa chaperonin [Morus notabilis])

HSP 1 Score: 377.1 bits (967), Expect = 2.900e-101
Identity = 198/255 (77.65%), Postives = 227/255 (89.02%), Query Frame = 1

		  
Query: 46  MAAAQLTAATVSSRGLPTFEGLRSSSLKVAAFVPSR-QGLSQRS-FSPLVVKAATVVAPK 105
           MA+AQLTA+++S+R  P FEGLR SS+K AA    +  G++QRS F  LVV+AATVVAPK
Sbjct: 1   MASAQLTASSISARSFPAFEGLRPSSVKFAAAGQVKFAGINQRSSFRALVVQAATVVAPK 60

Query: 106 YTSIKPTADRVLIKIKEAEEKTSGGILLPSTAVSKPQSGEVVAIGEGRTIGKNKVEIGVK 165
           YTSIKP  DRVL+KIK AEEKT GGILLP+TA +KPQ GEVVA+GEG+T+GK KV+I VK
Sbjct: 61  YTSIKPLGDRVLLKIKSAEEKTEGGILLPTTAQTKPQGGEVVAVGEGKTVGKTKVDITVK 120

Query: 166 TGTQVVYSKYAGTELEFNGSNHLLLKEDDIIGVLETDEIKDLKPLNERVLIKVAEAEEKT 225
           TG QVVYSKYAGTELEFNG+ HL+LK DDI+G+LETD++KDLKPLN+RVLIKVAEAEEKT
Sbjct: 121 TGAQVVYSKYAGTELEFNGAKHLILKYDDIVGILETDDVKDLKPLNDRVLIKVAEAEEKT 180

Query: 226 AGGLLLTEASKEKPSVGTVIAVGSGPLDEEGNRKPLSVAAGNTVMYSKYAGNEFKGKDGS 285
           AGGLLLTEASKEKPS+GTVIAVG GPLDEEGN+KPL+V AG+TVMYSKYAGN+FKGKDGS
Sbjct: 181 AGGLLLTEASKEKPSIGTVIAVGPGPLDEEGNKKPLTVTAGSTVMYSKYAGNDFKGKDGS 240

Query: 286 DYIVLRASDVMAVLS 299
           DYI LRASDVMAVLS
Sbjct: 241 DYIALRASDVMAVLS 255

[Close]

BLAST of Spo20469.1 vs. UniProtKB/TrEMBL
Match: A0A0K9RUA6_SPIOL (Uncharacterized protein OS=Spinacia oleracea GN=SOVF_028130 PE=3 SV=1)

HSP 1 Score: 473.0 bits (1216), Expect = 2.700e-130
Identity = 254/254 (100.00%), Postives = 254/254 (100.00%), Query Frame = 1

		  
Query: 46  MAAAQLTAATVSSRGLPTFEGLRSSSLKVAAFVPSRQGLSQRSFSPLVVKAATVVAPKYT 105
           MAAAQLTAATVSSRGLPTFEGLRSSSLKVAAFVPSRQGLSQRSFSPLVVKAATVVAPKYT
Sbjct: 1   MAAAQLTAATVSSRGLPTFEGLRSSSLKVAAFVPSRQGLSQRSFSPLVVKAATVVAPKYT 60

Query: 106 SIKPTADRVLIKIKEAEEKTSGGILLPSTAVSKPQSGEVVAIGEGRTIGKNKVEIGVKTG 165
           SIKPTADRVLIKIKEAEEKTSGGILLPSTAVSKPQSGEVVAIGEGRTIGKNKVEIGVKTG
Sbjct: 61  SIKPTADRVLIKIKEAEEKTSGGILLPSTAVSKPQSGEVVAIGEGRTIGKNKVEIGVKTG 120

Query: 166 TQVVYSKYAGTELEFNGSNHLLLKEDDIIGVLETDEIKDLKPLNERVLIKVAEAEEKTAG 225
           TQVVYSKYAGTELEFNGSNHLLLKEDDIIGVLETDEIKDLKPLNERVLIKVAEAEEKTAG
Sbjct: 121 TQVVYSKYAGTELEFNGSNHLLLKEDDIIGVLETDEIKDLKPLNERVLIKVAEAEEKTAG 180

Query: 226 GLLLTEASKEKPSVGTVIAVGSGPLDEEGNRKPLSVAAGNTVMYSKYAGNEFKGKDGSDY 285
           GLLLTEASKEKPSVGTVIAVGSGPLDEEGNRKPLSVAAGNTVMYSKYAGNEFKGKDGSDY
Sbjct: 181 GLLLTEASKEKPSVGTVIAVGSGPLDEEGNRKPLSVAAGNTVMYSKYAGNEFKGKDGSDY 240

Query: 286 IVLRASDVMAVLSS 300
           IVLRASDVMAVLSS
Sbjct: 241 IVLRASDVMAVLSS 254

[Close]

BLAST of Spo20469.1 vs. UniProtKB/TrEMBL
Match: A0A0J8BQ40_BETVU (Uncharacterized protein OS=Beta vulgaris subsp. vulgaris GN=BVRB_8g190660 PE=3 SV=1)

HSP 1 Score: 428.3 bits (1100), Expect = 7.500e-117
Identity = 222/254 (87.40%), Postives = 242/254 (95.28%), Query Frame = 1

		  
Query: 46  MAAAQLTAATVSSRGLPTFEGLRSSSLKVAAFVPSRQGLSQRSFSPLVVKAATVVAPKYT 105
           MAAAQLTA +VSSRGLPTFEGLR S++K+AAF P RQGLSQR F PLVVKAATVVAPKYT
Sbjct: 1   MAAAQLTATSVSSRGLPTFEGLRPSAIKIAAFAPLRQGLSQRCFRPLVVKAATVVAPKYT 60

Query: 106 SIKPTADRVLIKIKEAEEKTSGGILLPSTAVSKPQSGEVVAIGEGRTIGKNKVEIGVKTG 165
           +I P ADRVLIKIKEAEEKTSGGILLPSTA+SKPQ GEVVA+GEGRTIGK+K+EIGVKTG
Sbjct: 61  TITPLADRVLIKIKEAEEKTSGGILLPSTALSKPQYGEVVAVGEGRTIGKSKIEIGVKTG 120

Query: 166 TQVVYSKYAGTELEFNGSNHLLLKEDDIIGVLETDEIKDLKPLNERVLIKVAEAEEKTAG 225
           +QVVYSKYAGTELEFNGSNHLL+KEDDI+G+LETD+IK+LKP+NERVLIKVAEAE+ TAG
Sbjct: 121 SQVVYSKYAGTELEFNGSNHLLMKEDDIVGILETDDIKELKPMNERVLIKVAEAEQTTAG 180

Query: 226 GLLLTEASKEKPSVGTVIAVGSGPLDEEGNRKPLSVAAGNTVMYSKYAGNEFKGKDGSDY 285
           GLLLTEASKEKPSVG+VIAVG GPLDEEGNRKPLSV+ GNTVMYSKYAGNEFKGKDGSDY
Sbjct: 181 GLLLTEASKEKPSVGSVIAVGPGPLDEEGNRKPLSVSPGNTVMYSKYAGNEFKGKDGSDY 240

Query: 286 IVLRASDVMAVLSS 300
           IVLR+SDVMAVLSS
Sbjct: 241 IVLRSSDVMAVLSS 254

[Close]

BLAST of Spo20469.1 vs. UniProtKB/TrEMBL
Match: A0A059CUA6_EUCGR (Uncharacterized protein OS=Eucalyptus grandis GN=EUGRSUZ_C03295 PE=3 SV=1)

HSP 1 Score: 381.7 bits (979), Expect = 8.100e-103
Identity = 197/254 (77.56%), Postives = 229/254 (90.16%), Query Frame = 1

		  
Query: 46  MAAAQLTAATVSSRGLPTFEGLRSSSLKVAAFVPSRQG-LSQRSFSPLVVKAATVVAPKY 105
           MA+ QLTA   S+R +P+F+GL+ S++K A   P + G L+QRSF  LVV+AATVVAPKY
Sbjct: 1   MASGQLTAPAFSARLVPSFDGLKPSTVKFAFVGPFKGGSLAQRSFRGLVVRAATVVAPKY 60

Query: 106 TSIKPTADRVLIKIKEAEEKTSGGILLPSTAVSKPQSGEVVAIGEGRTIGKNKVEIGVKT 165
           TS+KP  DRVL+KIK AEEKT GGILLPSTA SKPQ GEVVA+GEGRTIGK++++I VKT
Sbjct: 61  TSLKPLGDRVLVKIKTAEEKTQGGILLPSTAQSKPQGGEVVAVGEGRTIGKSQIDISVKT 120

Query: 166 GTQVVYSKYAGTELEFNGSNHLLLKEDDIIGVLETDEIKDLKPLNERVLIKVAEAEEKTA 225
           G+QV+YSKYAGTELEFNGSNHL+LKEDDI+G+LET+++KDLKPLNER+LIKVAEAE+KTA
Sbjct: 121 GSQVIYSKYAGTELEFNGSNHLILKEDDILGILETEDVKDLKPLNERILIKVAEAEQKTA 180

Query: 226 GGLLLTEASKEKPSVGTVIAVGSGPLDEEGNRKPLSVAAGNTVMYSKYAGNEFKGKDGSD 285
           GGLLLTEASKEKPS+GTVIAVG GPLDEEGNRKPL+V+AGNTVMYSKYAGN+FK  DGSD
Sbjct: 181 GGLLLTEASKEKPSIGTVIAVGPGPLDEEGNRKPLTVSAGNTVMYSKYAGNDFKNSDGSD 240

Query: 286 YIVLRASDVMAVLS 299
           YIVLRASDVMAVLS
Sbjct: 241 YIVLRASDVMAVLS 254

[Close]

BLAST of Spo20469.1 vs. UniProtKB/TrEMBL
Match: W9R4V1_9ROSA (20 kDa chaperonin OS=Morus notabilis GN=L484_004086 PE=3 SV=1)

HSP 1 Score: 377.1 bits (967), Expect = 2.000e-101
Identity = 198/255 (77.65%), Postives = 227/255 (89.02%), Query Frame = 1

		  
Query: 46  MAAAQLTAATVSSRGLPTFEGLRSSSLKVAAFVPSR-QGLSQRS-FSPLVVKAATVVAPK 105
           MA+AQLTA+++S+R  P FEGLR SS+K AA    +  G++QRS F  LVV+AATVVAPK
Sbjct: 1   MASAQLTASSISARSFPAFEGLRPSSVKFAAAGQVKFAGINQRSSFRALVVQAATVVAPK 60

Query: 106 YTSIKPTADRVLIKIKEAEEKTSGGILLPSTAVSKPQSGEVVAIGEGRTIGKNKVEIGVK 165
           YTSIKP  DRVL+KIK AEEKT GGILLP+TA +KPQ GEVVA+GEG+T+GK KV+I VK
Sbjct: 61  YTSIKPLGDRVLLKIKSAEEKTEGGILLPTTAQTKPQGGEVVAVGEGKTVGKTKVDITVK 120

Query: 166 TGTQVVYSKYAGTELEFNGSNHLLLKEDDIIGVLETDEIKDLKPLNERVLIKVAEAEEKT 225
           TG QVVYSKYAGTELEFNG+ HL+LK DDI+G+LETD++KDLKPLN+RVLIKVAEAEEKT
Sbjct: 121 TGAQVVYSKYAGTELEFNGAKHLILKYDDIVGILETDDVKDLKPLNDRVLIKVAEAEEKT 180

Query: 226 AGGLLLTEASKEKPSVGTVIAVGSGPLDEEGNRKPLSVAAGNTVMYSKYAGNEFKGKDGS 285
           AGGLLLTEASKEKPS+GTVIAVG GPLDEEGN+KPL+V AG+TVMYSKYAGN+FKGKDGS
Sbjct: 181 AGGLLLTEASKEKPSIGTVIAVGPGPLDEEGNKKPLTVTAGSTVMYSKYAGNDFKGKDGS 240

Query: 286 DYIVLRASDVMAVLS 299
           DYI LRASDVMAVLS
Sbjct: 241 DYIALRASDVMAVLS 255

[Close]

BLAST of Spo20469.1 vs. UniProtKB/TrEMBL
Match: A0A068U3B4_COFCA (Uncharacterized protein OS=Coffea canephora GN=GSCOC_T00041526001 PE=3 SV=1)

HSP 1 Score: 375.9 bits (964), Expect = 4.400e-101
Identity = 195/256 (76.17%), Postives = 228/256 (89.06%), Query Frame = 1

		  
Query: 46  MAAAQLTAATVSSRGLPTFEGLRSSS--LKVAAFVPSRQ-GLSQRSFSPLVVKAATVVAP 105
           MA AQLTA+T+S++G  +FEGLR+SS  +K + F P RQ GLS RSF  LVVKAA VVAP
Sbjct: 1   MATAQLTASTISAKGFVSFEGLRASSTTVKASTFAPLRQNGLSTRSFRGLVVKAAAVVAP 60

Query: 106 KYTSIKPTADRVLIKIKEAEEKTSGGILLPSTAVSKPQSGEVVAIGEGRTIGKNKVEIGV 165
           KYTS+KP  DRVL+KIK  EEK+ GGILLP++A +KPQ GEVVA+GEGRTIGK+KV+I V
Sbjct: 61  KYTSLKPLGDRVLVKIKVPEEKSVGGILLPTSAQTKPQGGEVVAVGEGRTIGKSKVDISV 120

Query: 166 KTGTQVVYSKYAGTELEFNGSNHLLLKEDDIIGVLETDEIKDLKPLNERVLIKVAEAEEK 225
           KTGTQ+VYSKYAGTE+EFNGSNHL+LKEDDI+G+L+TD++KD+KPLN+RVLIKVAEAEEK
Sbjct: 121 KTGTQIVYSKYAGTEVEFNGSNHLILKEDDIVGILDTDDVKDMKPLNDRVLIKVAEAEEK 180

Query: 226 TAGGLLLTEASKEKPSVGTVIAVGSGPLDEEGNRKPLSVAAGNTVMYSKYAGNEFKGKDG 285
           TAGGLLLTEA+KE+PS+GTVIAVG GPLDEEGNRK LSV+ GNTV+YSKYAGN+FKG D 
Sbjct: 181 TAGGLLLTEATKERPSIGTVIAVGPGPLDEEGNRKALSVSPGNTVLYSKYAGNDFKGSDD 240

Query: 286 SDYIVLRASDVMAVLS 299
           SDYI LRASDVMAVLS
Sbjct: 241 SDYIALRASDVMAVLS 256

[Close]

BLAST of Spo20469.1 vs. ExPASy Swiss-Prot
Match: CH10C_ARATH (20 kDa chaperonin, chloroplastic OS=Arabidopsis thaliana GN=CPN21 PE=1 SV=2)

HSP 1 Score: 349.4 bits (895), Expect = 4.000e-95
Identity = 185/255 (72.55%), Postives = 216/255 (84.71%), Query Frame = 1

		  
Query: 46  MAAAQLTAA--TVSSRGLPTFEGLRSSSLKVAAFVPSRQGLSQRSFSPLVVKAATVVAPK 105
           MAA QLTA+  T+S+R L + +GLR+SS+K ++  P    L Q  F  LVVKAA+VVAPK
Sbjct: 1   MAATQLTASPVTMSARSLASLDGLRASSVKFSSLKPGT--LRQSQFRRLVVKAASVVAPK 60

Query: 106 YTSIKPTADRVLIKIKEAEEKTSGGILLPSTAVSKPQSGEVVAIGEGRTIGKNKVEIGVK 165
           YTSIKP  DRVL+KIKEAEEKT GGILLPSTA SKPQ GEVVA+GEGRTIGKNK++I V 
Sbjct: 61  YTSIKPLGDRVLVKIKEAEEKTLGGILLPSTAQSKPQGGEVVAVGEGRTIGKNKIDITVP 120

Query: 166 TGTQVVYSKYAGTELEFNGSNHLLLKEDDIIGVLETDEIKDLKPLNERVLIKVAEAEEKT 225
           TG Q++YSKYAGTE+EFN   HL+LKEDDI+G+LET++IKDLKPLN+RV IKVAEAEEKT
Sbjct: 121 TGAQIIYSKYAGTEVEFNDVKHLILKEDDIVGILETEDIKDLKPLNDRVFIKVAEAEEKT 180

Query: 226 AGGLLLTEASKEKPSVGTVIAVGSGPLDEEGNRKPLSVAAGNTVMYSKYAGNEFKGKDGS 285
           AGGLLLTE +KEKPS+GTVIAVG G LDEEG   PL V+ G+TV+YSKYAGN+FKGKDGS
Sbjct: 181 AGGLLLTETTKEKPSIGTVIAVGPGSLDEEGKITPLPVSTGSTVLYSKYAGNDFKGKDGS 240

Query: 286 DYIVLRASDVMAVLS 299
           +YI LRASDVMA+LS
Sbjct: 241 NYIALRASDVMAILS 253

[Close]

BLAST of Spo20469.1 vs. ExPASy Swiss-Prot
Match: CH10C_SPIOL (20 kDa chaperonin, chloroplastic OS=Spinacia oleracea GN=CPN21 PE=2 SV=1)

HSP 1 Score: 310.1 bits (793), Expect = 2.700e-83
Identity = 165/258 (63.95%), Postives = 203/258 (78.68%), Query Frame = 1

		  
Query: 46  MAAAQLTA-ATVSSRGLPTFEGLRSSS----LKVAAFVPSRQGLSQRSFSPLVVKAATVV 105
           MAA  LT+ ++++   LP+FEGLRS+S    + V+   PS    + RSF  LVV+AA++ 
Sbjct: 1   MAATHLTSTSSLTINTLPSFEGLRSASGISKINVSVAYPS---FTSRSFRGLVVRAASIT 60

Query: 106 APKYTSIKPTADRVLIKIKEAEEKTSGGILLPSTAVSKPQSGEVVAIGEGRTIGKNKVEI 165
             KYTS+KP  DRVLIK K  EEKT+ GI LP+ A  KPQSGEVVAIG G+ +G  K+ +
Sbjct: 61  TSKYTSVKPLGDRVLIKTKIVEEKTTSGIFLPTAAQKKPQSGEVVAIGSGKKVGDKKLPV 120

Query: 166 GVKTGTQVVYSKYAGTELEFNGSNHLLLKEDDIIGVLETDEIKDLKPLNERVLIKVAEAE 225
            VKTG +VVYSKY GTE+E +GS+HL++KEDDIIG+LETD++KDLKPLN+R+LIKVAE E
Sbjct: 121 AVKTGAEVVYSKYTGTEIEVDGSSHLIVKEDDIIGILETDDVKDLKPLNDRLLIKVAEVE 180

Query: 226 EKTAGGLLLTEASKEKPSVGTVIAVGSGPLDEEGNRKPLSVAAGNTVMYSKYAGNEFKGK 285
            KT+GGLLL E+SKEKPS GTV+A G G LDEEGNR PL V +GNTV+YSKYAGN+FKG 
Sbjct: 181 NKTSGGLLLAESSKEKPSFGTVVATGPGVLDEEGNRIPLPVCSGNTVLYSKYAGNDFKGV 240

Query: 286 DGSDYIVLRASDVMAVLS 299
           DGSDY+VLR SDVMAVLS
Sbjct: 241 DGSDYMVLRVSDVMAVLS 255

[Close]

BLAST of Spo20469.1 vs. ExPASy Swiss-Prot
Match: CH10_THEPX (10 kDa chaperonin OS=Thermoanaerobacter sp. (strain X514) GN=groS PE=3 SV=1)

HSP 1 Score: 106.7 bits (265), Expect = 4.500e-22
Identity = 49/92 (53.26%), Postives = 70/92 (76.09%), Query Frame = 1

		  
Query: 107 IKPTADRVLIKIKEAEEKTSGGILLPSTAVSKPQSGEVVAIGEGRTIGKNKVEIGVKTGT 166
           +KP  DRV++K+ +AEE T GG++LP TA  KPQ GEVVA+G G+ I   KVE+ VK G 
Sbjct: 3   LKPLGDRVVVKVIQAEEVTKGGVILPGTAKEKPQQGEVVAVGTGQYIDGKKVELEVKVGD 62

Query: 167 QVVYSKYAGTELEFNGSNHLLLKEDDIIGVLE 199
           +V++SKYAGTE++ +G  +LLL+E DI+ ++E
Sbjct: 63  RVIFSKYAGTEVKLDGEEYLLLRESDILAIIE 94

[Close]

BLAST of Spo20469.1 vs. ExPASy Swiss-Prot
Match: CH10_THEP3 (10 kDa chaperonin OS=Thermoanaerobacter pseudethanolicus (strain ATCC 33223 / 39E) GN=groS PE=3 SV=1)

HSP 1 Score: 106.7 bits (265), Expect = 4.500e-22
Identity = 49/92 (53.26%), Postives = 70/92 (76.09%), Query Frame = 1

		  
Query: 107 IKPTADRVLIKIKEAEEKTSGGILLPSTAVSKPQSGEVVAIGEGRTIGKNKVEIGVKTGT 166
           +KP  DRV++K+ +AEE T GG++LP TA  KPQ GEVVA+G G+ I   KVE+ VK G 
Sbjct: 3   LKPLGDRVVVKVIQAEEVTKGGVILPGTAKEKPQQGEVVAVGTGQYIDGKKVELEVKVGD 62

Query: 167 QVVYSKYAGTELEFNGSNHLLLKEDDIIGVLE 199
           +V++SKYAGTE++ +G  +LLL+E DI+ ++E
Sbjct: 63  RVIFSKYAGTEVKLDGEEYLLLRESDILAIIE 94

[Close]

BLAST of Spo20469.1 vs. ExPASy Swiss-Prot
Match: CH10_THEBR (10 kDa chaperonin OS=Thermoanaerobacter brockii GN=groS PE=1 SV=1)

HSP 1 Score: 106.3 bits (264), Expect = 5.900e-22
Identity = 49/92 (53.26%), Postives = 69/92 (75.00%), Query Frame = 1

		  
Query: 107 IKPTADRVLIKIKEAEEKTSGGILLPSTAVSKPQSGEVVAIGEGRTIGKNKVEIGVKTGT 166
           +KP  DRV++K+ +AEE T GG++LP TA  KPQ GEVVA+G G  I   KVE+ VK G 
Sbjct: 3   LKPLGDRVVVKVIQAEEVTKGGVILPGTAKEKPQQGEVVAVGTGEYIDGKKVELEVKVGD 62

Query: 167 QVVYSKYAGTELEFNGSNHLLLKEDDIIGVLE 199
           +V++SKYAGTE++ +G  +LLL+E DI+ ++E
Sbjct: 63  RVIFSKYAGTEVKLDGEEYLLLRESDILAIIE 94

[Close]

BLAST of Spo20469.1 vs. TAIR (Arabidopsis)
Match: AT5G20720.1 (chaperonin 20)

HSP 1 Score: 349.4 bits (895), Expect = 2.300e-96
Identity = 185/255 (72.55%), Postives = 216/255 (84.71%), Query Frame = 1

		  
Query: 46  MAAAQLTAA--TVSSRGLPTFEGLRSSSLKVAAFVPSRQGLSQRSFSPLVVKAATVVAPK 105
           MAA QLTA+  T+S+R L + +GLR+SS+K ++  P    L Q  F  LVVKAA+VVAPK
Sbjct: 1   MAATQLTASPVTMSARSLASLDGLRASSVKFSSLKPGT--LRQSQFRRLVVKAASVVAPK 60

Query: 106 YTSIKPTADRVLIKIKEAEEKTSGGILLPSTAVSKPQSGEVVAIGEGRTIGKNKVEIGVK 165
           YTSIKP  DRVL+KIKEAEEKT GGILLPSTA SKPQ GEVVA+GEGRTIGKNK++I V 
Sbjct: 61  YTSIKPLGDRVLVKIKEAEEKTLGGILLPSTAQSKPQGGEVVAVGEGRTIGKNKIDITVP 120

Query: 166 TGTQVVYSKYAGTELEFNGSNHLLLKEDDIIGVLETDEIKDLKPLNERVLIKVAEAEEKT 225
           TG Q++YSKYAGTE+EFN   HL+LKEDDI+G+LET++IKDLKPLN+RV IKVAEAEEKT
Sbjct: 121 TGAQIIYSKYAGTEVEFNDVKHLILKEDDIVGILETEDIKDLKPLNDRVFIKVAEAEEKT 180

Query: 226 AGGLLLTEASKEKPSVGTVIAVGSGPLDEEGNRKPLSVAAGNTVMYSKYAGNEFKGKDGS 285
           AGGLLLTE +KEKPS+GTVIAVG G LDEEG   PL V+ G+TV+YSKYAGN+FKGKDGS
Sbjct: 181 AGGLLLTETTKEKPSIGTVIAVGPGSLDEEGKITPLPVSTGSTVLYSKYAGNDFKGKDGS 240

Query: 286 DYIVLRASDVMAVLS 299
           +YI LRASDVMA+LS
Sbjct: 241 NYIALRASDVMAILS 253

[Close]

BLAST of Spo20469.1 vs. TAIR (Arabidopsis)
Match: AT1G14980.1 (chaperonin 10)

HSP 1 Score: 54.7 bits (130), Expect = 1.100e-7
Identity = 36/96 (37.50%), Postives = 54/96 (56.25%), Query Frame = 1

		  
Query: 202 IKDLKPLNERVLIKVAEAEEKTAGGLLLTEASKEKPSVGTVIAVGSGPLDEEGNRKPLSV 261
           +K L P   R+L++      KT  G+LL E S +  S G VIAVG G  D++G   P+SV
Sbjct: 2   MKRLIPTFNRILVQRVIQPAKTESGILLPEKSSKLNS-GKVIAVGPGSRDKDGKLIPVSV 61

Query: 262 AAGNTVMYSKYAGNEFKGKDGSDYIVLRASDVMAVL 298
             G+TV+  +Y G + K  + ++Y + R  DV+  L
Sbjct: 62  KEGDTVLLPEYGGTQVKLGE-NEYHLFRDEDVLGTL 95

[Close]

BLAST of Spo20469.1 vs. TAIR (Arabidopsis)
Match: AT3G60210.1 (GroES-like family protein)

HSP 1 Score: 54.7 bits (130), Expect = 1.100e-7
Identity = 33/97 (34.02%), Postives = 59/97 (60.82%), Query Frame = 1

		  
Query: 107 IKPTADRVLIKIKEAEEKTSGGILLPSTAV--SKPQSGEVVAIGEGRTIGKNKVEIG-VK 166
           + P ADRVL++++   EK+SGG+LLP +AV   +  +GEVV++G          E+G V+
Sbjct: 51  VVPQADRVLVRLEVLPEKSSGGVLLPKSAVKFERYLTGEVVSVGS---------EVGEVE 110

Query: 167 TGTQVVYSKYAGTELEF--NGSNHLLLKEDDIIGVLE 199
            G +V++S  +  E++F    + H   KE D++ +++
Sbjct: 111 PGKKVLFSDMSAYEVDFGTEDAKHCFCKESDLLAIVQ 138

[Close]

BLAST of Spo20469.1 vs. TAIR (Arabidopsis)
Match: AT2G44650.1 (chloroplast chaperonin 10)

HSP 1 Score: 50.4 bits (119), Expect = 2.200e-6
Identity = 30/97 (30.93%), Postives = 57/97 (58.76%), Query Frame = 1

		  
Query: 105 TSIKPTADRVLIKIKEAEEKTSGGILLPSTAV--SKPQSGEVVAIGEGRTIGKNKVEIGV 164
           T + P ADRVL+++++   K+SGG+LLP  AV   +  +GE++++G       ++V   V
Sbjct: 50  TKVVPQADRVLVRLEDLPIKSSGGVLLPKAAVKFERYLTGEIISVG-------SEVGQQV 109

Query: 165 KTGTQVVYSKYAGTELEF-NGSNHLLLKEDDIIGVLE 199
             G +V++S  +  E++    + H   KE D++ ++E
Sbjct: 110 GPGKRVLFSDVSAYEVDLGTDARHCFCKESDLLALVE 139

The following BLAST results are available for this feature:

BLAST of Spo20469.1 vs. NCBI nr
BLAST of Spo20469.1 vs. UniProtKB/TrEMBL
BLAST of Spo20469.1 vs. ExPASy Swiss-Prot
BLAST of Spo20469.1 vs. TAIR (Arabidopsis)

BLAST of Spo20469.1 vs. NCBI nr
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. NCBI nr)
Total hits: 5

Position :

Zoom :

x 1


Match Name	E-value	Identity	Description
gi\|902233438\|gb\|KNA23058.1\|	3.8e-130	100.	hypothetical protein SOVF_0281...	[more]
gi\|731352417\|ref\|XP_010687539.1\|	1.1e-116	87.4	PREDICTED: 20 kDa chaperonin, ...	[more]
gi\|702303436\|ref\|XP_010049377.1\|	1.2e-102	77.5	PREDICTED: 20 kDa chaperonin, ...	[more]
gi\|747063189\|ref\|XP_011078133.1\|	9.8e-102	77.0	PREDICTED: 20 kDa chaperonin, ...	[more]
gi\|703073874\|ref\|XP_010089662.1\|	2.9e-101	77.6	20 kDa chaperonin [Morus notab...	[more]

BLAST of Spo20469.1 vs. UniProtKB/TrEMBL
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. UniprotKB/TrEMBL)
Total hits: 5

Position :

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x 1


Match Name	E-value	Identity	Description
A0A0K9RUA6_SPIOL	2.7e-130	100.	Uncharacterized protein OS=Spi...	[more]
A0A0J8BQ40_BETVU	7.5e-117	87.4	Uncharacterized protein OS=Bet...	[more]
A0A059CUA6_EUCGR	8.1e-103	77.5	Uncharacterized protein OS=Euc...	[more]
W9R4V1_9ROSA	2.0e-101	77.6	20 kDa chaperonin OS=Morus not...	[more]
A0A068U3B4_COFCA	4.4e-101	76.1	Uncharacterized protein OS=Cof...	[more]

BLAST of Spo20469.1 vs. ExPASy Swiss-Prot
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. ExPASy SwissProt)
Total hits: 5

Position :

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x 1


Match Name	E-value	Identity	Description
CH10C_ARATH	4.0e-95	72.5	20 kDa chaperonin, chloroplast...	[more]
CH10C_SPIOL	2.7e-83	63.9	20 kDa chaperonin, chloroplast...	[more]
CH10_THEPX	4.5e-22	53.2	10 kDa chaperonin OS=Thermoana...	[more]
CH10_THEP3	4.5e-22	53.2	10 kDa chaperonin OS=Thermoana...	[more]
CH10_THEBR	5.9e-22	53.2	10 kDa chaperonin OS=Thermoana...	[more]

BLAST of Spo20469.1 vs. TAIR (Arabidopsis)
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. TAIR)
Total hits: 4

Position :

Zoom :

x 1


Match Name	E-value	Identity	Description
AT5G20720.1	2.3e-96	72.5	chaperonin 20	[more]
AT1G14980.1	1.1e-7	37.5	chaperonin 10	[more]
AT3G60210.1	1.1e-7	34.0	GroES-like family protein	[more]
AT2G44650.1	2.2e-6	30.9	chloroplast chaperonin 10	[more]

InterPro

Analysis Name: InterPro Annotations of S. oleracea
Date Performed: 2018-06-29

Position :

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x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR011032	GroES-like	unknown	SSF50129	GroES-like	coord: 105..198 score: 1.77E-26coord: 204..297 score: 6.83
IPR018369	Chaperonin GroES, conserved site	PROSITE	PS00681	CHAPERONINS_CPN10	coord: 107..131 score: -coord: 205..229 scor
IPR020818	GroES chaperonin family	PRINTS	PR00297	CHAPERONIN10	coord: 107..122 score: 2.5E-24coord: 129..150 score: 2.5E-24coord: 184..197 score: 2.5E-24coord: 163..175 score: 2.5
IPR020818	GroES chaperonin family	GENE3D	2.30.33.40		coord: 106..198 score: 1.3E-30coord: 204..297 score: 1.3
IPR020818	GroES chaperonin family	HAMAP	MF_00580	CH10	coord: 204..298 score: 21.597coord: 106..198 score: 22
IPR020818	GroES chaperonin family	PANTHER	PTHR10772	10 KDA HEAT SHOCK PROTEIN	coord: 47..207 score: 1.0
IPR020818	GroES chaperonin family	PFAM	PF00166	Cpn10	coord: 107..196 score: 8.2E-28coord: 205..296 score: 1.7
IPR020818	GroES chaperonin family	SMART	SM00883	Cpn10_2	coord: 204..297 score: 1.2E-40coord: 106..197 score: 2.8
None	No IPR available	PANTHER	PTHR10772:SF0	20 KDA CHAPERONIN, CHLOROPLASTIC	coord: 47..207 score: 1.0

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006457	protein folding
biological_process	GO:0042254	ribosome biogenesis
biological_process	GO:0009098	leucine biosynthetic process
biological_process	GO:0055114	oxidation-reduction process
biological_process	GO:0006744	ubiquinone biosynthetic process
biological_process	GO:0009099	valine biosynthetic process
biological_process	GO:0042026	protein refolding
biological_process	GO:0048481	plant ovule development
biological_process	GO:0016226	iron-sulfur cluster assembly
biological_process	GO:0009658	chloroplast organization
biological_process	GO:0001510	RNA methylation
biological_process	GO:0006412	translation
biological_process	GO:0009097	isoleucine biosynthetic process
biological_process	GO:0010027	thylakoid membrane organization
biological_process	GO:0046686	response to cadmium ion
biological_process	GO:0006448	regulation of translational elongation
biological_process	GO:0034660	ncRNA metabolic process
biological_process	GO:0019288	isopentenyl diphosphate biosynthetic process, methylerythritol 4-phosphate pathway
biological_process	GO:0042744	hydrogen peroxide catabolic process
biological_process	GO:0009793	embryo development ending in seed dormancy
biological_process	GO:0009902	chloroplast relocation
biological_process	GO:0016117	carotenoid biosynthetic process
cellular_component	GO:0005730	nucleolus
cellular_component	GO:0005618	cell wall
cellular_component	GO:0009506	plasmodesma
cellular_component	GO:0022627	cytosolic small ribosomal subunit
cellular_component	GO:0048046	apoplast
cellular_component	GO:0009579	thylakoid
cellular_component	GO:0005739	mitochondrion
cellular_component	GO:0016020	membrane
cellular_component	GO:0022626	cytosolic ribosome
cellular_component	GO:0005737	cytoplasm
cellular_component	GO:0005840	ribosome
cellular_component	GO:0009570	chloroplast stroma
cellular_component	GO:0009941	chloroplast envelope
cellular_component	GO:0009507	chloroplast
molecular_function	GO:0003862	3-isopropylmalate dehydrogenase activity
molecular_function	GO:0000287	magnesium ion binding
molecular_function	GO:0051287	NAD binding
molecular_function	GO:0003746	translation elongation factor activity
molecular_function	GO:0005515	protein binding
molecular_function	GO:0005524	ATP binding
molecular_function	GO:0003735	structural constituent of ribosome

RNA-Seq Expression

Co-expression


Gene	r value	Expression
Spo11836	0.78	Barchart \| Table
Spo16150	0.71	Barchart \| Table
Spo23160	0.70	Barchart \| Table
Spo13764	0.70	Barchart \| Table
Spo06468	0.67	Barchart \| Table
Spo05275	0.67	Barchart \| Table
Spo12071	0.65	Barchart \| Table