Spo19969 (gene)

Overview
NameSpo19969
Typegene
OrganismSpinacia oleracea (Spinach)
DescriptionUnknown protein
LocationSuper_scaffold_217 : 831023 .. 834127 (-)
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
GAATTTGAAGAAAATGAAGCTGAATAATGAAGATGTGAAAAAATTCAATAGTATGGAGGATGAAATTGATGTCTGTAAGTATTCTTCTTGTGAGTTTGATTGATAATTTATTTGAGAGAAATTATGTTAATTTGGAGTTGAATTCTATTAGACTATTTTAGTCAATGCTGAGATCGTTCTTGCGATTTGCATTTGTACAGATTTCTCTTATACGCTTTGAGTGTGATGCTGATTTCTATATAAAAAAATAGAATTATCAAAATAAAATTAAATAATGGTTGTATTTTGTTTGGCGGTTTTGATTTTCTTTAGTGGTTGGGGATGTCGAAATTGAAATGTATAGTTGAAGTTGAAGTTGTATGAAAGAGGAGAAAACTGGATAGGAATCATACTCATTTACTAAAATTGATTGGTTCTGCCTCCCCTGGGATTAATCTCTATTCTCTAAAGGTTTTAGAAGATGTGTAGAGAATTGTGATATCGTTTTCTTAGCTTTGGATTTCTAGGTTTTCTTTGCAGACTCAGATTTCTACGTTCGTGTTTTTTTTTTTCTTTTTTTTTTTCTGGGTTCTTTGTTTTTATTATTTGTTTTTGGTTGACATATACACATTGGTAATCGTTATTTGATTTCATATGATAATGTGTATCATATTAACAGACAAAGATCCCTCGGTGAAAGGTCTCTTAATGACTTTCTTATGTCGCCTCGGGTGCAAATCTAGAAATGCTGATAATATAAGTCGCTTACTAGACCATCTAGAAAATATTGTTTGCTCCTGTCGTCGATCTTTGATTACTTCCTGTTTTCAGTTTGCTTTAAAGTTTCTCTCCTAAAATCTTTCCGTGATTTCAAGCAAACTGAAAACAGGAAGTTTACTTATTGAAAACAGGAAGTAATAGGGTTGATCTAGAAAATATTGTTTGCTCTGGTAGTTGTTCTTCGATTACTTCCTGTTTTTAGTTGCTTTAAAGTTTCTCTCCTGAATCTTTCAATGATAAAATTGTTGTTCTATGTTGATCAACCCTATTCAATTATGTTGCATGTGTGACTAATGATTTGTTTCTCATGTCAGGTTTGTAAGTTCTTTACAGATAATCAGTGATACGGATACCCTCCAGAAATTATGGTTTATGCTTTTCTGACATCTGAAATGATTGTTCCCTGCTGATACTTTCCAGGTTCGTTCTTTTTCTTTATATTGTTTTCAAGTTATGGTTTTTTTAATGATCTGAACTACAACTCTTGAATGGCTTTAGAAACAAATGCAAACAACTGATTTCTTTGAACCCCAATTTCAATTTTTAACGGGAGATTAATAGTTGTGAATATATGTGGTTAAGTAAATAATAATAACACAATTGGTTTAATTTATTTACATGAATGATTGAATATTTACATAGATAAGTGTATTGCCCTAACTTCCTAAATCGCTCTCTAATTCAGGTCGTCTACAAACCTCTGCAAGTAATTTAAGAGCAGTGTGTTAGAGAGAGATAGAGAGTAGAGAGGAGCAGCAATGGATTTCGTCAGCCCAGATGGCCTCCGCCCAGCCGGTCATCGTCCCTTGGAGGAGATGAGGCAGCTTCGCGCTGAATTGGCGCCGTCTCTAAAGCTGACAGGTAATTTCCTAGCTTTTTTTCCAATTTTATTTTAACTGTGTTTGCGAATAATAGAAATTATAAGTTTGAATCTGGCAATTGGGTGTAGCTCAGCTGTTATCGAGATGGGTAACAGCTGGACATCTACTAATTGAGAATGCAAAGCTGTTTTAATTGTTGGTCATAATGTTGGCAAATCCACTCTNGACATCTACTAATTGAGAATGCAAAGCTGTTTTAATTGTTGGTCATAATGTTGGCAAATCCACTCTTTTTAATGTTGTTGTAAGCCAGTTTTTCTCCTTCATTGACTCTCAAATATGTTGTTTGGTTCTGTCTGTAAGGTGTTTAATCAATCAAATGACAACATTGAGAAATGCCTCAAAATTTGTTTGTTTTTTGAATTTCTAAGATTAATTTTTTGTTCATTACCTTAATGATTGTGGGTAGAGGTTGATTGTTATTATTTGGGGTTTGTCTTTATTGGCTATGGTAGCTTCAGGCTGTTTTGCTTCCTTGAGTTTAGACTTGGACTGTGTTGGTCCATTTGAGATCTTGCTATTTTGTAAGTGAAGTGTACTATTTAAGTGGAATGACTTGAAATAGAAAGCAAGGTAGTAAGTTGTGAATAAGATAGCAATGACTCTATTCCCCTGTATTAATCCCGTACCTCAGATTGGGCTCCTCTAGGTGTAATATATAATAAAGATACCATGAAAATTAACTTCAGAATGCCAAGTCTAACTGACATATTTTGTACAGTCGTACATTTTCTTTCTTAATGTCCATTTTTGGTTGCGAAACTGTGAACCATCTGCTTTGTAGAGATTTTGCTGACCTATTCTCTGATTTCTAGCATGGCATTGACAAGGACAATGCAATCTAGGAGTAATAGCAAAGTAAAGAGAGGTGACATAAGTACGCGGCTCACTATATATGAGTTTGCTCTGTTGTAGACCATCTCTTTGACATCGTTGCTCTGTTGGTGCTGTTTTTTTTTGTTATTGTTGTTGCTATTATTGTTGTTGTTTCTGCTGCTACTACTACTGCTTATGTTTAGACCTGATATTGCTGTCAAGCCGTTTTTTCCCCAAGGAATAATTATCTCTCTGTTATCTAAATGAATAATGCAAGACTATATGTTTTAATGCCTGTTTAAGTGGATATTTAAAAGATTAGGTAATCCAAAGACTAATATATAGACCCTAACTAATCCGAACTTGAGATGGGTTGGTTGCCAGATGGGAGGAATGCCGGTGCATTTGCATTTTAGGTGGTGTTGTGTTTATGTATGGCTTGAATTCATGAATTTATCCTAATTGTTATTTTGAATTTTTATGTAACAGTTGATGGATTGAAGGCTTTCGAGGTGTACACAGATGGATCGCAGATGATGTGGCTCTAAGGAGGGCAAATACAGTTTGGTAGCACAGTTAGTTTTGTAGTTTGTACCCCCAACCCAATTCTTTGACGCAAAAAATATATGGAAAAGATAAGATTTCTCAG

mRNA sequence

GAATTTGAAGAAAATGAAGCTGAATAATGAAGATGTGAAAAAATTCAATAGTATGGAGGATGAAATTGATGTCTGTTTGTAAGTTCTTTACAGATAATCAGTGATACGGATACCCTCCAGAAATTATGGTTTATGCTTTTCTGACATCTGAAATGATTGTTCCCTGCTGATACTTTCCAGGTCGTCTACAAACCTCTGCAAGTAATTTAAGAGCAGTGTGTTAGAGAGAGATAGAGAGTAGAGAGGAGCAGCAATGGATTTCGTCAGCCCAGATGGCCTCCGCCCAGCCGGTCATCGTCCCTTGGAGGAGATGAGGCAGCTTCGCGCTGAATTGGCGCCGTCTCTAAAGCTGACAGGCTGTTTTGCTTCCTTGAGTTTAGACTTGGACTGTGTTGGTCCATTTGAGATCTTGCTATTTTTTGATGGATTGAAGGCTTTCGAGGTGTACACAGATGGATCGCAGATGATGTGGCTCTAAGGAGGGCAAATACAGTTTGGTAGCACAGTTAGTTTTGTAGTTTGTACCCCCAACCCAATTCTTTGACGCAAAAAATATATGGAAAAGATAAGATTTCTCAG

Coding sequence (CDS)

ATGGATTTCGTCAGCCCAGATGGCCTCCGCCCAGCCGGTCATCGTCCCTTGGAGGAGATGAGGCAGCTTCGCGCTGAATTGGCGCCGTCTCTAAAGCTGACAGGCTGTTTTGCTTCCTTGAGTTTAGACTTGGACTGTGTTGGTCCATTTGAGATCTTGCTATTTTTTGATGGATTGAAGGCTTTCGAGGTGTACACAGATGGATCGCAGATGATGTGGCTCTAA

Protein sequence

MDFVSPDGLRPAGHRPLEEMRQLRAELAPSLKLTGCFASLSLDLDCVGPFEILLFFDGLKAFEVYTDGSQMMWL
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Spo19969.1Spo19969.1mRNA


Homology
The following BLAST results are available for this feature:
BLAST of Spo19969.1 vs. NCBI nr
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. NCBI nr)
Total hits: 0
Match NameE-valueIdentityDescription
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BLAST of Spo19969.1 vs. UniProtKB/TrEMBL
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. UniprotKB/TrEMBL)
Total hits: 0
Match NameE-valueIdentityDescription
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BLAST of Spo19969.1 vs. ExPASy Swiss-Prot
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. ExPASy SwissProt)
Total hits: 0
Match NameE-valueIdentityDescription
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BLAST of Spo19969.1 vs. TAIR (Arabidopsis)
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. TAIR)
Total hits: 0
Match NameE-valueIdentityDescription
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GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0032259 methylation
biological_process GO:0006281 DNA repair
biological_process GO:0000723 telomere maintenance
biological_process GO:0009987 cellular process
cellular_component GO:0031410 cytoplasmic vesicle
cellular_component GO:0009536 plastid
cellular_component GO:0005657 replication fork
molecular_function GO:0008168 methyltransferase activity
molecular_function GO:0003678 DNA helicase activity
RNA-Seq Expression