Homology
BLAST of Spo19560.1 vs. NCBI nr
Match:
gi|11497513|ref|NP_054921.1| (ribosomal protein S2 [Spinacia oleracea])
HSP 1 Score: 415.6 bits (1067), Expect = 5.000e-113
Identity = 207/223 (92.83%), Postives = 207/223 (92.83%), Query Frame = 1
Query: 1 MEAGVHFGHGTRKWNPRMSPYISAKCK---------------EACDLVFDASSRGKQFLI 60 MEAGVHFGHGTRKWNPRMSPYISAKCK EACDLVFDASSRGKQFLI Sbjct: 14 MEAGVHFGHGTRKWNPRMSPYISAKCKGIHIINLTRTARFLSEACDLVFDASSRGKQFLI 73 Query: 61 VGTKNKAVDSVARAAIRARCHYVNKKWLGGMLTNWSTTETRLHKFRDLRMEQTAGRLARL 120 VGTKNKA DSVARAAIRARCHYVNKKWLGGMLTNWSTTETRLHKFRDLRMEQTAGRLARL Sbjct: 74 VGTKNKAADSVARAAIRARCHYVNKKWLGGMLTNWSTTETRLHKFRDLRMEQTAGRLARL 133 Query: 121 PKRDAAVVKRQLSHLQTYLGGIKYMTGLPDIVIIVDQQEEYTALRECITLGIPTICLIDT 180 PKRDAAVVKRQLSHLQTYLGGIKYMTGLPDIVIIVDQQEEYTALRECITLGIPTICLIDT Sbjct: 134 PKRDAAVVKRQLSHLQTYLGGIKYMTGLPDIVIIVDQQEEYTALRECITLGIPTICLIDT 193 Query: 181 NCNPDLADISIPANDDAIASIRLILTKLVFAICEGRSSYIRNP 209 NCNPDLADISIPANDDAIASIRLILTKLVFAICEGRSSYIRNP Sbjct: 194 NCNPDLADISIPANDDAIASIRLILTKLVFAICEGRSSYIRNP 236
BLAST of Spo19560.1 vs. NCBI nr
Match:
gi|188036203|pdb|3BBN|B (Chain B, Homology Model For The Spinach Chloroplast 30s Subunit Fitted To 9.4a Cryo-Em Map Of The 70s Chlororibosome)
HSP 1 Score: 412.5 bits (1059), Expect = 4.300e-112
Identity = 206/222 (92.79%), Postives = 206/222 (92.79%), Query Frame = 1
Query: 1 MEAGVHFGHGTRKWNPRMSPYISAKCK---------------EACDLVFDASSRGKQFLI 60 MEAGVHFGHGTRKWNPRMSPYISAKCK EACDLVFDASSRGKQFLI Sbjct: 10 MEAGVHFGHGTRKWNPRMSPYISAKCKGIHIINLTRTARFLSEACDLVFDASSRGKQFLI 69 Query: 61 VGTKNKAVDSVARAAIRARCHYVNKKWLGGMLTNWSTTETRLHKFRDLRMEQTAGRLARL 120 VGTKNKA DSVARAAIRARCHYVNKKWLGGMLTNWSTTETRLHKFRDLRMEQTAGRLARL Sbjct: 70 VGTKNKAADSVARAAIRARCHYVNKKWLGGMLTNWSTTETRLHKFRDLRMEQTAGRLARL 129 Query: 121 PKRDAAVVKRQLSHLQTYLGGIKYMTGLPDIVIIVDQQEEYTALRECITLGIPTICLIDT 180 PKRDAAVVKRQLSHLQTYLGGIKYMTGLPDIVIIVDQQEEYTALRECITLGIPTICLIDT Sbjct: 130 PKRDAAVVKRQLSHLQTYLGGIKYMTGLPDIVIIVDQQEEYTALRECITLGIPTICLIDT 189 Query: 181 NCNPDLADISIPANDDAIASIRLILTKLVFAICEGRSSYIRN 208 NCNPDLADISIPANDDAIASIRLILTKLVFAICEGRSSYIRN Sbjct: 190 NCNPDLADISIPANDDAIASIRLILTKLVFAICEGRSSYIRN 231
BLAST of Spo19560.1 vs. NCBI nr
Match:
gi|628819097|gb|AHY80530.1| (ribosomal protein S2 (plastid) [Beta vulgaris subsp. vulgaris])
HSP 1 Score: 410.2 bits (1053), Expect = 2.100e-111
Identity = 204/223 (91.48%), Postives = 206/223 (92.38%), Query Frame = 1
Query: 1 MEAGVHFGHGTRKWNPRMSPYISAKCK---------------EACDLVFDASSRGKQFLI 60 MEAGVHFGHGTRKWNPRMSPYISAKCK EACDLVFDASSRGKQFLI Sbjct: 14 MEAGVHFGHGTRKWNPRMSPYISAKCKGIHIINLTRTARFLSEACDLVFDASSRGKQFLI 73 Query: 61 VGTKNKAVDSVARAAIRARCHYVNKKWLGGMLTNWSTTETRLHKFRDLRMEQTAGRLARL 120 VGTKNKA DSVARAAIRARCHYVNKKWLGGMLTNWSTTETRLHKFRDLRMEQ AGRLARL Sbjct: 74 VGTKNKAADSVARAAIRARCHYVNKKWLGGMLTNWSTTETRLHKFRDLRMEQKAGRLARL 133 Query: 121 PKRDAAVVKRQLSHLQTYLGGIKYMTGLPDIVIIVDQQEEYTALRECITLGIPTICLIDT 180 PKRDAAV+KRQLSHLQTYLGGIKYMTGLPDIVIIVDQQEEYTALRECITLGIPTICLIDT Sbjct: 134 PKRDAAVLKRQLSHLQTYLGGIKYMTGLPDIVIIVDQQEEYTALRECITLGIPTICLIDT 193 Query: 181 NCNPDLADISIPANDDAIASIRLILTKLVFAICEGRSSYIRNP 209 NC+PDLADISIPANDDAIASIRLILTKLVFAICEGRSSYIRNP Sbjct: 194 NCDPDLADISIPANDDAIASIRLILTKLVFAICEGRSSYIRNP 236
BLAST of Spo19560.1 vs. NCBI nr
Match:
gi|1020267073|gb|AMZ03424.1| (ribosomal Protein S2 (chloroplast) [Bienertia sinuspersici])
HSP 1 Score: 408.7 bits (1049), Expect = 6.200e-111
Identity = 203/223 (91.03%), Postives = 205/223 (91.93%), Query Frame = 1
Query: 1 MEAGVHFGHGTRKWNPRMSPYISAKCK---------------EACDLVFDASSRGKQFLI 60 MEAGVHFGHGTRKWNPRMSPYISAKCK EACDLVFDASSRGKQFLI Sbjct: 14 MEAGVHFGHGTRKWNPRMSPYISAKCKGIHILNLTRTARFLSEACDLVFDASSRGKQFLI 73 Query: 61 VGTKNKAVDSVARAAIRARCHYVNKKWLGGMLTNWSTTETRLHKFRDLRMEQTAGRLARL 120 VGTKNKA DSVARAAIRARCHYVNKKWLGGMLTNWSTTETRLHKFRDLRMEQ AGRL RL Sbjct: 74 VGTKNKAADSVARAAIRARCHYVNKKWLGGMLTNWSTTETRLHKFRDLRMEQKAGRLTRL 133 Query: 121 PKRDAAVVKRQLSHLQTYLGGIKYMTGLPDIVIIVDQQEEYTALRECITLGIPTICLIDT 180 PKRDAAV+KRQLSHLQTYLGGIKYMTGLPDIVIIVDQQEEYTALRECITLGIPTICLIDT Sbjct: 134 PKRDAAVLKRQLSHLQTYLGGIKYMTGLPDIVIIVDQQEEYTALRECITLGIPTICLIDT 193 Query: 181 NCNPDLADISIPANDDAIASIRLILTKLVFAICEGRSSYIRNP 209 NC+PDLADISIPANDDAIASIRLILTKLVFAICEGRSSYIRNP Sbjct: 194 NCDPDLADISIPANDDAIASIRLILTKLVFAICEGRSSYIRNP 236
BLAST of Spo19560.1 vs. NCBI nr
Match:
gi|836642792|ref|YP_009143796.1| (30S ribosomal protein S2 (chloroplast) [Salicornia bigelovii])
HSP 1 Score: 408.3 bits (1048), Expect = 8.100e-111
Identity = 203/223 (91.03%), Postives = 205/223 (91.93%), Query Frame = 1
Query: 1 MEAGVHFGHGTRKWNPRMSPYISAKCK---------------EACDLVFDASSRGKQFLI 60 MEAGVHFGHGTRKWNPRMSPYISAKCK EACDLVFDASSRGKQFLI Sbjct: 14 MEAGVHFGHGTRKWNPRMSPYISAKCKGIHILNLTRTARFLLEACDLVFDASSRGKQFLI 73 Query: 61 VGTKNKAVDSVARAAIRARCHYVNKKWLGGMLTNWSTTETRLHKFRDLRMEQTAGRLARL 120 VGTKNKA DSVARAAIRARCHYVNKKWLGGMLTNWSTTETRLHKFRDLRMEQ AGRLARL Sbjct: 74 VGTKNKAADSVARAAIRARCHYVNKKWLGGMLTNWSTTETRLHKFRDLRMEQKAGRLARL 133 Query: 121 PKRDAAVVKRQLSHLQTYLGGIKYMTGLPDIVIIVDQQEEYTALRECITLGIPTICLIDT 180 PKRDAAV+KRQLSHLQTYLGGIKYMTGLPDIVIIVDQQEEYTALRECITLGIPTICLIDT Sbjct: 134 PKRDAAVLKRQLSHLQTYLGGIKYMTGLPDIVIIVDQQEEYTALRECITLGIPTICLIDT 193 Query: 181 NCNPDLADISIPANDDAIASIRLILTKLVFAICEGRSSYIRNP 209 NC+PDLADISIPANDDAIASIRLILTKLVFAICEG SSYIRNP Sbjct: 194 NCDPDLADISIPANDDAIASIRLILTKLVFAICEGHSSYIRNP 236
BLAST of Spo19560.1 vs. UniProtKB/TrEMBL
Match:
A0A023ZQR1_BETVU (Ribosomal protein S2 OS=Beta vulgaris subsp. vulgaris GN=rps2 PE=3 SV=1)
HSP 1 Score: 410.2 bits (1053), Expect = 1.500e-111
Identity = 204/223 (91.48%), Postives = 206/223 (92.38%), Query Frame = 1
Query: 1 MEAGVHFGHGTRKWNPRMSPYISAKCK---------------EACDLVFDASSRGKQFLI 60 MEAGVHFGHGTRKWNPRMSPYISAKCK EACDLVFDASSRGKQFLI Sbjct: 14 MEAGVHFGHGTRKWNPRMSPYISAKCKGIHIINLTRTARFLSEACDLVFDASSRGKQFLI 73 Query: 61 VGTKNKAVDSVARAAIRARCHYVNKKWLGGMLTNWSTTETRLHKFRDLRMEQTAGRLARL 120 VGTKNKA DSVARAAIRARCHYVNKKWLGGMLTNWSTTETRLHKFRDLRMEQ AGRLARL Sbjct: 74 VGTKNKAADSVARAAIRARCHYVNKKWLGGMLTNWSTTETRLHKFRDLRMEQKAGRLARL 133 Query: 121 PKRDAAVVKRQLSHLQTYLGGIKYMTGLPDIVIIVDQQEEYTALRECITLGIPTICLIDT 180 PKRDAAV+KRQLSHLQTYLGGIKYMTGLPDIVIIVDQQEEYTALRECITLGIPTICLIDT Sbjct: 134 PKRDAAVLKRQLSHLQTYLGGIKYMTGLPDIVIIVDQQEEYTALRECITLGIPTICLIDT 193 Query: 181 NCNPDLADISIPANDDAIASIRLILTKLVFAICEGRSSYIRNP 209 NC+PDLADISIPANDDAIASIRLILTKLVFAICEGRSSYIRNP Sbjct: 194 NCDPDLADISIPANDDAIASIRLILTKLVFAICEGRSSYIRNP 236
BLAST of Spo19560.1 vs. UniProtKB/TrEMBL
Match:
A0A165XMG5_9CARY (Ribosomal Protein S2 OS=Bienertia sinuspersici GN=rps2 PE=4 SV=1)
HSP 1 Score: 408.7 bits (1049), Expect = 4.300e-111
Identity = 203/223 (91.03%), Postives = 205/223 (91.93%), Query Frame = 1
Query: 1 MEAGVHFGHGTRKWNPRMSPYISAKCK---------------EACDLVFDASSRGKQFLI 60 MEAGVHFGHGTRKWNPRMSPYISAKCK EACDLVFDASSRGKQFLI Sbjct: 14 MEAGVHFGHGTRKWNPRMSPYISAKCKGIHILNLTRTARFLSEACDLVFDASSRGKQFLI 73 Query: 61 VGTKNKAVDSVARAAIRARCHYVNKKWLGGMLTNWSTTETRLHKFRDLRMEQTAGRLARL 120 VGTKNKA DSVARAAIRARCHYVNKKWLGGMLTNWSTTETRLHKFRDLRMEQ AGRL RL Sbjct: 74 VGTKNKAADSVARAAIRARCHYVNKKWLGGMLTNWSTTETRLHKFRDLRMEQKAGRLTRL 133 Query: 121 PKRDAAVVKRQLSHLQTYLGGIKYMTGLPDIVIIVDQQEEYTALRECITLGIPTICLIDT 180 PKRDAAV+KRQLSHLQTYLGGIKYMTGLPDIVIIVDQQEEYTALRECITLGIPTICLIDT Sbjct: 134 PKRDAAVLKRQLSHLQTYLGGIKYMTGLPDIVIIVDQQEEYTALRECITLGIPTICLIDT 193 Query: 181 NCNPDLADISIPANDDAIASIRLILTKLVFAICEGRSSYIRNP 209 NC+PDLADISIPANDDAIASIRLILTKLVFAICEGRSSYIRNP Sbjct: 194 NCDPDLADISIPANDDAIASIRLILTKLVFAICEGRSSYIRNP 236
BLAST of Spo19560.1 vs. UniProtKB/TrEMBL
Match:
A0A0G2QY55_SALBI (30S ribosomal protein S2, chloroplastic OS=Salicornia bigelovii GN=rps2 PE=3 SV=1)
HSP 1 Score: 408.3 bits (1048), Expect = 5.600e-111
Identity = 203/223 (91.03%), Postives = 205/223 (91.93%), Query Frame = 1
Query: 1 MEAGVHFGHGTRKWNPRMSPYISAKCK---------------EACDLVFDASSRGKQFLI 60 MEAGVHFGHGTRKWNPRMSPYISAKCK EACDLVFDASSRGKQFLI Sbjct: 14 MEAGVHFGHGTRKWNPRMSPYISAKCKGIHILNLTRTARFLLEACDLVFDASSRGKQFLI 73 Query: 61 VGTKNKAVDSVARAAIRARCHYVNKKWLGGMLTNWSTTETRLHKFRDLRMEQTAGRLARL 120 VGTKNKA DSVARAAIRARCHYVNKKWLGGMLTNWSTTETRLHKFRDLRMEQ AGRLARL Sbjct: 74 VGTKNKAADSVARAAIRARCHYVNKKWLGGMLTNWSTTETRLHKFRDLRMEQKAGRLARL 133 Query: 121 PKRDAAVVKRQLSHLQTYLGGIKYMTGLPDIVIIVDQQEEYTALRECITLGIPTICLIDT 180 PKRDAAV+KRQLSHLQTYLGGIKYMTGLPDIVIIVDQQEEYTALRECITLGIPTICLIDT Sbjct: 134 PKRDAAVLKRQLSHLQTYLGGIKYMTGLPDIVIIVDQQEEYTALRECITLGIPTICLIDT 193 Query: 181 NCNPDLADISIPANDDAIASIRLILTKLVFAICEGRSSYIRNP 209 NC+PDLADISIPANDDAIASIRLILTKLVFAICEG SSYIRNP Sbjct: 194 NCDPDLADISIPANDDAIASIRLILTKLVFAICEGHSSYIRNP 236
BLAST of Spo19560.1 vs. UniProtKB/TrEMBL
Match:
A0A0G2QXA8_SALEU (30S ribosomal protein S2, chloroplastic OS=Salicornia europaea GN=rps2 PE=3 SV=1)
HSP 1 Score: 408.3 bits (1048), Expect = 5.600e-111
Identity = 203/223 (91.03%), Postives = 205/223 (91.93%), Query Frame = 1
Query: 1 MEAGVHFGHGTRKWNPRMSPYISAKCK---------------EACDLVFDASSRGKQFLI 60 MEAGVHFGHGTRKWNPRMSPYISAKCK EACDLVFDASSRGKQFLI Sbjct: 14 MEAGVHFGHGTRKWNPRMSPYISAKCKGIHILNLTRTARFLSEACDLVFDASSRGKQFLI 73 Query: 61 VGTKNKAVDSVARAAIRARCHYVNKKWLGGMLTNWSTTETRLHKFRDLRMEQTAGRLARL 120 VGTKNKA DSVARAAIRARCHYVNKKWLGGMLTNWSTTETRLHKFRDLRMEQ AGRLARL Sbjct: 74 VGTKNKAADSVARAAIRARCHYVNKKWLGGMLTNWSTTETRLHKFRDLRMEQKAGRLARL 133 Query: 121 PKRDAAVVKRQLSHLQTYLGGIKYMTGLPDIVIIVDQQEEYTALRECITLGIPTICLIDT 180 PKRDAAV+KRQLSHLQTYLGGIKYMTGLPDIVIIVDQQEEYTALRECITLGIPTICLIDT Sbjct: 134 PKRDAAVLKRQLSHLQTYLGGIKYMTGLPDIVIIVDQQEEYTALRECITLGIPTICLIDT 193 Query: 181 NCNPDLADISIPANDDAIASIRLILTKLVFAICEGRSSYIRNP 209 NC+PDLADISIPANDDAIASIRLILTKLVFAICEG SSYIRNP Sbjct: 194 NCDPDLADISIPANDDAIASIRLILTKLVFAICEGHSSYIRNP 236
BLAST of Spo19560.1 vs. UniProtKB/TrEMBL
Match:
A0A0G2QX62_9CARY (30S ribosomal protein S2, chloroplastic OS=Salicornia brachiata GN=rps2 PE=3 SV=1)
HSP 1 Score: 408.3 bits (1048), Expect = 5.600e-111
Identity = 203/223 (91.03%), Postives = 205/223 (91.93%), Query Frame = 1
Query: 1 MEAGVHFGHGTRKWNPRMSPYISAKCK---------------EACDLVFDASSRGKQFLI 60 MEAGVHFGHGTRKWNPRMSPYISAKCK EACDLVFDASSRGKQFLI Sbjct: 14 MEAGVHFGHGTRKWNPRMSPYISAKCKGIHILNLTRTARFLSEACDLVFDASSRGKQFLI 73 Query: 61 VGTKNKAVDSVARAAIRARCHYVNKKWLGGMLTNWSTTETRLHKFRDLRMEQTAGRLARL 120 VGTKNKA DSVARAAIRARCHYVNKKWLGGMLTNWSTTETRLHKFRDLRMEQ AGRLARL Sbjct: 74 VGTKNKAADSVARAAIRARCHYVNKKWLGGMLTNWSTTETRLHKFRDLRMEQKAGRLARL 133 Query: 121 PKRDAAVVKRQLSHLQTYLGGIKYMTGLPDIVIIVDQQEEYTALRECITLGIPTICLIDT 180 PKRDAAV+KRQLSHLQTYLGGIKYMTGLPDIVIIVDQQEEYTALRECITLGIPTICLIDT Sbjct: 134 PKRDAAVLKRQLSHLQTYLGGIKYMTGLPDIVIIVDQQEEYTALRECITLGIPTICLIDT 193 Query: 181 NCNPDLADISIPANDDAIASIRLILTKLVFAICEGRSSYIRNP 209 NC+PDLADISIPANDDAIASIRLILTKLVFAICEG SSYIRNP Sbjct: 194 NCDPDLADISIPANDDAIASIRLILTKLVFAICEGHSSYIRNP 236
BLAST of Spo19560.1 vs. ExPASy Swiss-Prot
Match:
RR2_SPIOL (30S ribosomal protein S2, chloroplastic OS=Spinacia oleracea GN=rps2 PE=1 SV=1)
HSP 1 Score: 415.6 bits (1067), Expect = 3.200e-115
Identity = 207/223 (92.83%), Postives = 207/223 (92.83%), Query Frame = 1
Query: 1 MEAGVHFGHGTRKWNPRMSPYISAKCK---------------EACDLVFDASSRGKQFLI 60 MEAGVHFGHGTRKWNPRMSPYISAKCK EACDLVFDASSRGKQFLI Sbjct: 14 MEAGVHFGHGTRKWNPRMSPYISAKCKGIHIINLTRTARFLSEACDLVFDASSRGKQFLI 73 Query: 61 VGTKNKAVDSVARAAIRARCHYVNKKWLGGMLTNWSTTETRLHKFRDLRMEQTAGRLARL 120 VGTKNKA DSVARAAIRARCHYVNKKWLGGMLTNWSTTETRLHKFRDLRMEQTAGRLARL Sbjct: 74 VGTKNKAADSVARAAIRARCHYVNKKWLGGMLTNWSTTETRLHKFRDLRMEQTAGRLARL 133 Query: 121 PKRDAAVVKRQLSHLQTYLGGIKYMTGLPDIVIIVDQQEEYTALRECITLGIPTICLIDT 180 PKRDAAVVKRQLSHLQTYLGGIKYMTGLPDIVIIVDQQEEYTALRECITLGIPTICLIDT Sbjct: 134 PKRDAAVVKRQLSHLQTYLGGIKYMTGLPDIVIIVDQQEEYTALRECITLGIPTICLIDT 193 Query: 181 NCNPDLADISIPANDDAIASIRLILTKLVFAICEGRSSYIRNP 209 NCNPDLADISIPANDDAIASIRLILTKLVFAICEGRSSYIRNP Sbjct: 194 NCNPDLADISIPANDDAIASIRLILTKLVFAICEGRSSYIRNP 236
BLAST of Spo19560.1 vs. ExPASy Swiss-Prot
Match:
RR2_EUCGG (30S ribosomal protein S2, chloroplastic OS=Eucalyptus globulus subsp. globulus GN=rps2 PE=3 SV=1)
HSP 1 Score: 395.6 bits (1015), Expect = 3.400e-109
Identity = 197/223 (88.34%), Postives = 202/223 (90.58%), Query Frame = 1
Query: 1 MEAGVHFGHGTRKWNPRMSPYISAKCK---------------EACDLVFDASSRGKQFLI 60 MEAGVHFGHGTRKWNPRM+PYISAK K EACDLVFDA+SRGKQFLI Sbjct: 14 MEAGVHFGHGTRKWNPRMAPYISAKRKGIHITNLTKTARFLSEACDLVFDAASRGKQFLI 73 Query: 61 VGTKNKAVDSVARAAIRARCHYVNKKWLGGMLTNWSTTETRLHKFRDLRMEQTAGRLARL 120 VGTKNKA DSVARAAIRARCHYVNKKWLGGMLTNWSTTETRLHKFRDLR EQ AGRL RL Sbjct: 74 VGTKNKAADSVARAAIRARCHYVNKKWLGGMLTNWSTTETRLHKFRDLRTEQKAGRLNRL 133 Query: 121 PKRDAAVVKRQLSHLQTYLGGIKYMTGLPDIVIIVDQQEEYTALRECITLGIPTICLIDT 180 PKRDAA++KRQLSHLQTYLGGIKYMTGLPDIVIIVDQQEEYTALRECITLGIPTICLIDT Sbjct: 134 PKRDAAMLKRQLSHLQTYLGGIKYMTGLPDIVIIVDQQEEYTALRECITLGIPTICLIDT 193 Query: 181 NCNPDLADISIPANDDAIASIRLILTKLVFAICEGRSSYIRNP 209 NC+PDLADISIPANDDAIASIRLIL KLVFAICEGRSSYIRNP Sbjct: 194 NCDPDLADISIPANDDAIASIRLILNKLVFAICEGRSSYIRNP 236
BLAST of Spo19560.1 vs. ExPASy Swiss-Prot
Match:
RR2_VITVI (30S ribosomal protein S2, chloroplastic OS=Vitis vinifera GN=rps2 PE=3 SV=1)
HSP 1 Score: 390.6 bits (1002), Expect = 1.100e-107
Identity = 194/223 (87.00%), Postives = 200/223 (89.69%), Query Frame = 1
Query: 1 MEAGVHFGHGTRKWNPRMSPYISAKCK---------------EACDLVFDASSRGKQFLI 60 MEAGVHFGHGTRKWNPRM+PYISAK K EACDLVFDA+SRGKQFLI Sbjct: 14 MEAGVHFGHGTRKWNPRMAPYISAKRKGIHITNLTRTARFLSEACDLVFDAASRGKQFLI 73 Query: 61 VGTKNKAVDSVARAAIRARCHYVNKKWLGGMLTNWSTTETRLHKFRDLRMEQTAGRLARL 120 VGTKNKA DSVARAAI+ARCHYVNKKWLGGM TNWSTTETRLHKFRDLR EQ GRL RL Sbjct: 74 VGTKNKAADSVARAAIKARCHYVNKKWLGGMSTNWSTTETRLHKFRDLRTEQKTGRLNRL 133 Query: 121 PKRDAAVVKRQLSHLQTYLGGIKYMTGLPDIVIIVDQQEEYTALRECITLGIPTICLIDT 180 PKRDAA++KRQLSHLQTYLGGIKYMTGLPDIVIIVDQQEEYTALRECITLGIPTICLIDT Sbjct: 134 PKRDAAMLKRQLSHLQTYLGGIKYMTGLPDIVIIVDQQEEYTALRECITLGIPTICLIDT 193 Query: 181 NCNPDLADISIPANDDAIASIRLILTKLVFAICEGRSSYIRNP 209 NC+PDLADISIPANDDAIASIRLIL KLVFAICEGRSSYIRNP Sbjct: 194 NCDPDLADISIPANDDAIASIRLILNKLVFAICEGRSSYIRNP 236
BLAST of Spo19560.1 vs. ExPASy Swiss-Prot
Match:
RR2_COFAR (30S ribosomal protein S2, chloroplastic OS=Coffea arabica GN=rps2 PE=3 SV=1)
HSP 1 Score: 384.8 bits (987), Expect = 6.000e-106
Identity = 191/223 (85.65%), Postives = 197/223 (88.34%), Query Frame = 1
Query: 1 MEAGVHFGHGTRKWNPRMSPYISAKCK---------------EACDLVFDASSRGKQFLI 60 MEAGVHFGHGTRKWNP+M PYISAK K EACDLVFDA SRGKQFLI Sbjct: 14 MEAGVHFGHGTRKWNPKMEPYISAKRKGIHITNLTRTARFLSEACDLVFDAGSRGKQFLI 73 Query: 61 VGTKNKAVDSVARAAIRARCHYVNKKWLGGMLTNWSTTETRLHKFRDLRMEQTAGRLARL 120 VGTKNKA DSVA AAIRARCHYVNKKWLGGMLTNWSTTETRLHKFRDLRMEQ GRL RL Sbjct: 74 VGTKNKAADSVAWAAIRARCHYVNKKWLGGMLTNWSTTETRLHKFRDLRMEQKTGRLNRL 133 Query: 121 PKRDAAVVKRQLSHLQTYLGGIKYMTGLPDIVIIVDQQEEYTALRECITLGIPTICLIDT 180 PKRDAA++KRQLS LQTYLGGIKYMTGLPDIVII+DQ EEYTALRECITLGIPTICLIDT Sbjct: 134 PKRDAAMLKRQLSRLQTYLGGIKYMTGLPDIVIIIDQHEEYTALRECITLGIPTICLIDT 193 Query: 181 NCNPDLADISIPANDDAIASIRLILTKLVFAICEGRSSYIRNP 209 NC+PDLADISIPANDDAI+SIRLIL KLVFAICEGRSSYIRNP Sbjct: 194 NCDPDLADISIPANDDAISSIRLILNKLVFAICEGRSSYIRNP 236
BLAST of Spo19560.1 vs. ExPASy Swiss-Prot
Match:
RR2_CARPA (30S ribosomal protein S2, chloroplastic OS=Carica papaya GN=rps2 PE=3 SV=1)
HSP 1 Score: 384.4 bits (986), Expect = 7.800e-106
Identity = 192/222 (86.49%), Postives = 198/222 (89.19%), Query Frame = 1
Query: 1 MEAGVHFGHGTRKWNPRMSPYISAKCK---------------EACDLVFDASSRGKQFLI 60 MEAGVHFGHGTRKWNPRM+PYISAK K EACDLVFDA+SRGKQFLI Sbjct: 14 MEAGVHFGHGTRKWNPRMAPYISAKRKGIHITNLTRTARFLSEACDLVFDAASRGKQFLI 73 Query: 61 VGTKNKAVDSVARAAIRARCHYVNKKWLGGMLTNWSTTETRLHKFRDLRMEQTAGRLARL 120 VGTKNKA DSVARAAIRARCHYVNKKWLGGMLTNWSTTETRLHKFRDLR EQ GRL RL Sbjct: 74 VGTKNKAADSVARAAIRARCHYVNKKWLGGMLTNWSTTETRLHKFRDLRTEQKTGRLNRL 133 Query: 121 PKRDAAVVKRQLSHLQTYLGGIKYMTGLPDIVIIVDQQEEYTALRECITLGIPTICLIDT 180 PKRDAAV+KRQLSHLQTYLGGIKYMTGLPDIVII+DQQEEYTALRECITLGIPTI LIDT Sbjct: 134 PKRDAAVLKRQLSHLQTYLGGIKYMTGLPDIVIIIDQQEEYTALRECITLGIPTISLIDT 193 Query: 181 NCNPDLADISIPANDDAIASIRLILTKLVFAICEGRSSYIRN 208 NC+PDLADISIPANDDAIASIRLIL KLVFAICEG SSYI+N Sbjct: 194 NCDPDLADISIPANDDAIASIRLILNKLVFAICEGHSSYIQN 235
BLAST of Spo19560.1 vs. TAIR (Arabidopsis)
Match:
ATCG00160.1 (ribosomal protein S2)
HSP 1 Score: 366.7 bits (940), Expect = 9.500e-102
Identity = 184/222 (82.88%), Postives = 191/222 (86.04%), Query Frame = 1
Query: 1 MEAGVHFGHGTRKWNPRMSPYISAKCK---------------EACDLVFDASSRGKQFLI 60 M AGVHFGHGTRKWNPRM+PYISAK K EACDLVFDA+SRGKQFLI Sbjct: 14 MRAGVHFGHGTRKWNPRMAPYISAKRKGIHIINLTRTARFLSEACDLVFDAASRGKQFLI 73 Query: 61 VGTKNKAVDSVARAAIRARCHYVNKKWLGGMLTNWSTTETRLHKFRDLRMEQTAGRLARL 120 VGTKNKA D V+RAAIRARCHYVNKKWLGGMLTNWSTTE RLHKFRDLR EQ RL Sbjct: 74 VGTKNKAADLVSRAAIRARCHYVNKKWLGGMLTNWSTTEKRLHKFRDLRTEQKTEGFNRL 133 Query: 121 PKRDAAVVKRQLSHLQTYLGGIKYMTGLPDIVIIVDQQEEYTALRECITLGIPTICLIDT 180 PKRDAAV+KRQLS L+TYLGGIKYMTGLPDIVII+DQQEEYTALRECITLGIPTI LIDT Sbjct: 134 PKRDAAVLKRQLSRLETYLGGIKYMTGLPDIVIILDQQEEYTALRECITLGIPTISLIDT 193 Query: 181 NCNPDLADISIPANDDAIASIRLILTKLVFAICEGRSSYIRN 208 NCNPDLADISIPANDDAIASIR IL KLVFAICEGRSSYI+N Sbjct: 194 NCNPDLADISIPANDDAIASIRFILNKLVFAICEGRSSYIQN 235
The following BLAST results are available for this feature:
BLAST of Spo19560.1 vs. NCBI nr
Analysis Date: 2018-06-29 (
blastp Spinacia oleracea peptides vs. NCBI nr )
Total hits: 5
A T G G A A G C G G G A G T T C A T T T T G G T C A C G G T A C T C G G A A A T G G A A T C C T C G A A T G T C G C C T T A T A T C T C T G C A A A A T G T A A A G A G G C T T G T G A T T T A G T T T T T G A T G C A T C A A G T A G A G G A A A A C A A T T T T T A A T T G T T G G G A C A A A A A A T A A A G C A G T T G A T T C A G T A G C A C G G G C T G C A A T A A G G G C T C G C T G T C A T T A T G T T A A T A A A A A G T G G C T T G G G G G T A T G T T A A C G A A T T G G T C C A C G A C A G A A A C G A G A C T T C A C A A A T T C A G G G A C T T G A G A A T G G A A C A A A C G G C A G G G A G A C T C G C T C G T C T T C C A A A G A G A G A T G C G G C G G T G G T G A A G A G A C A A T T A T C T C A C T T G C A A A C A T A T T T G G G T G G G A T C A A A T A T A T G A C A G G G T T A C C G G A T A T T G T A A T C A T C G T T G A T C A A C A G G A A G A A T A T A C G G C C C T T C G A G A A T G T A T T A C T T T G G G A A T T C C A A C T A T T T G T T T A A T T G A T A C A A A T T G T A A C C C G G A T C T C G C A G A T A T T T C G A T T C C G G C A A A T G A T G A C G C T A T A G C T T C A A T T C G A T T A A T T C T T A C C A A A T T A G T A T T T G C A A T T T G T G A A G G C C G C T C T A G C T A T A T A A G A A A T C C T T G A 50 100 150 200 250 300 350 400 450 500 550 600 Expect = 5.00e-113 / Id = 92.83 Expect = 4.30e-112 / Id = 92.79 Expect = 2.10e-111 / Id = 91.48 Expect = 6.20e-111 / Id = 91.03 Expect = 8.10e-111 / Id = 91.03 Sequence NP_054921.1 gi|188036203|pdb|3BBN|B AHY80530.1 AMZ03424.1 YP_009143796.1
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BLAST of Spo19560.1 vs. UniProtKB/TrEMBL
Analysis Date: 2018-06-29 (
blastp Spinacia oleracea peptides vs. UniprotKB/TrEMBL )
Total hits: 5
A T G G A A G C G G G A G T T C A T T T T G G T C A C G G T A C T C G G A A A T G G A A T C C T C G A A T G T C G C C T T A T A T C T C T G C A A A A T G T A A A G A G G C T T G T G A T T T A G T T T T T G A T G C A T C A A G T A G A G G A A A A C A A T T T T T A A T T G T T G G G A C A A A A A A T A A A G C A G T T G A T T C A G T A G C A C G G G C T G C A A T A A G G G C T C G C T G T C A T T A T G T T A A T A A A A A G T G G C T T G G G G G T A T G T T A A C G A A T T G G T C C A C G A C A G A A A C G A G A C T T C A C A A A T T C A G G G A C T T G A G A A T G G A A C A A A C G G C A G G G A G A C T C G C T C G T C T T C C A A A G A G A G A T G C G G C G G T G G T G A A G A G A C A A T T A T C T C A C T T G C A A A C A T A T T T G G G T G G G A T C A A A T A T A T G A C A G G G T T A C C G G A T A T T G T A A T C A T C G T T G A T C A A C A G G A A G A A T A T A C G G C C C T T C G A G A A T G T A T T A C T T T G G G A A T T C C A A C T A T T T G T T T A A T T G A T A C A A A T T G T A A C C C G G A T C T C G C A G A T A T T T C G A T T C C G G C A A A T G A T G A C G C T A T A G C T T C A A T T C G A T T A A T T C T T A C C A A A T T A G T A T T T G C A A T T T G T G A A G G C C G C T C T A G C T A T A T A A G A A A T C C T T G A 50 100 150 200 250 300 350 400 450 500 550 600 Expect = 1.50e-111 / Id = 91.48 Expect = 4.30e-111 / Id = 91.03 Expect = 5.60e-111 / Id = 91.03 Expect = 5.60e-111 / Id = 91.03 Expect = 5.60e-111 / Id = 91.03 Sequence A0A023ZQR1_BETVU A0A165XMG5_9CARY A0A0G2QY55_SALBI A0A0G2QXA8_SALEU A0A0G2QX62_9CARY
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BLAST of Spo19560.1 vs. ExPASy Swiss-Prot
Analysis Date: 2018-06-29 (
blastp Spinacia oleracea peptides vs. ExPASy SwissProt )
Total hits: 5
A T G G A A G C G G G A G T T C A T T T T G G T C A C G G T A C T C G G A A A T G G A A T C C T C G A A T G T C G C C T T A T A T C T C T G C A A A A T G T A A A G A G G C T T G T G A T T T A G T T T T T G A T G C A T C A A G T A G A G G A A A A C A A T T T T T A A T T G T T G G G A C A A A A A A T A A A G C A G T T G A T T C A G T A G C A C G G G C T G C A A T A A G G G C T C G C T G T C A T T A T G T T A A T A A A A A G T G G C T T G G G G G T A T G T T A A C G A A T T G G T C C A C G A C A G A A A C G A G A C T T C A C A A A T T C A G G G A C T T G A G A A T G G A A C A A A C G G C A G G G A G A C T C G C T C G T C T T C C A A A G A G A G A T G C G G C G G T G G T G A A G A G A C A A T T A T C T C A C T T G C A A A C A T A T T T G G G T G G G A T C A A A T A T A T G A C A G G G T T A C C G G A T A T T G T A A T C A T C G T T G A T C A A C A G G A A G A A T A T A C G G C C C T T C G A G A A T G T A T T A C T T T G G G A A T T C C A A C T A T T T G T T T A A T T G A T A C A A A T T G T A A C C C G G A T C T C G C A G A T A T T T C G A T T C C G G C A A A T G A T G A C G C T A T A G C T T C A A T T C G A T T A A T T C T T A C C A A A T T A G T A T T T G C A A T T T G T G A A G G C C G C T C T A G C T A T A T A A G A A A T C C T T G A 50 100 150 200 250 300 350 400 450 500 550 600 Expect = 3.20e-115 / Id = 92.83 Expect = 3.40e-109 / Id = 88.34 Expect = 1.10e-107 / Id = 87.00 Expect = 6.00e-106 / Id = 85.65 Expect = 7.80e-106 / Id = 86.49 Sequence RR2_SPIOL RR2_EUCGG RR2_VITVI RR2_COFAR RR2_CARPA
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BLAST of Spo19560.1 vs. TAIR (Arabidopsis)
Analysis Date: 2018-06-29 (
blastp Spinacia oleracea peptides vs. TAIR )
Total hits: 1
A T G G A A G C G G G A G T T C A T T T T G G T C A C G G T A C T C G G A A A T G G A A T C C T C G A A T G T C G C C T T A T A T C T C T G C A A A A T G T A A A G A G G C T T G T G A T T T A G T T T T T G A T G C A T C A A G T A G A G G A A A A C A A T T T T T A A T T G T T G G G A C A A A A A A T A A A G C A G T T G A T T C A G T A G C A C G G G C T G C A A T A A G G G C T C G C T G T C A T T A T G T T A A T A A A A A G T G G C T T G G G G G T A T G T T A A C G A A T T G G T C C A C G A C A G A A A C G A G A C T T C A C A A A T T C A G G G A C T T G A G A A T G G A A C A A A C G G C A G G G A G A C T C G C T C G T C T T C C A A A G A G A G A T G C G G C G G T G G T G A A G A G A C A A T T A T C T C A C T T G C A A A C A T A T T T G G G T G G G A T C A A A T A T A T G A C A G G G T T A C C G G A T A T T G T A A T C A T C G T T G A T C A A C A G G A A G A A T A T A C G G C C C T T C G A G A A T G T A T T A C T T T G G G A A T T C C A A C T A T T T G T T T A A T T G A T A C A A A T T G T A A C C C G G A T C T C G C A G A T A T T T C G A T T C C G G C A A A T G A T G A C G C T A T A G C T T C A A T T C G A T T A A T T C T T A C C A A A T T A G T A T T T G C A A T T T G T G A A G G C C G C T C T A G C T A T A T A A G A A A T C C T T G A 50 100 150 200 250 300 350 400 450 500 550 600 Expect = 9.50e-102 / Id = 82.88 Sequence ATCG00160.1
Match Name E-value Identity Description
ATCG00160.1 9.5e-102 82.8 ribosomal protein S2 [more]
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