Spo14025 (gene) | SpinachBase

Overview


Name	Spo14025
Type	gene
Organism	Spinacia oleracea (Spinach)
Description	O-methyltransferase family protein
Location	Super_scaffold_66 : 1414227 .. 1418727 (-)

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDSexon

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGTGCTCTTTCCAACCGAGCTTACCAACAGGAGCCTCATGCAGGAATTGGTAAAGAAGTGGAAGTTCTCGTCTGAATTGCCTCTGAAATTAGGAAGGGGAAGTATAGTTTACGACATAAGGAGTTGCAACAACACAAAGTTACTCGATTAAGTGATTTTAGTTGTTGAAAAATTAATTTTTTGAAAATTTCCCAATTTGGGAACGGAAGAACAAATATGAGCTGAGAAGGAGGTAAATGGTCAGAATAATTAATTGGTGACGGAAGAATCGAAGCAAATATTTAATCCGTGATTTTTGCATTGGAAAATGGTTAATTGAACAACATTTTTTTTTTTCCTTTCCCACTTGCCCATAATACTAAATACAGTTAACCTAATAACGTAAAAGAGTTTTTAATTTTTTTGCGGCCCTCTTTTGGCTTGTGCCCTTTTTTTTTTTTGGTCAGAAAGAGTTACTTCATTAATTTCTAAGCACCAAAACGTTATCTAGAGTTTTTTCACATAGCCCCACTCCTTACGGAGGCAAAAATACAGCCACTTATGGCATAATTACGAAGCAAGCATGCTTCCAAAAAATAAGTTTCATTGTCACTAGAGATATCATTAGCTTAACATGGTGGGGGGGATAAATCAACGCCTTGATCCAACAGACTCAGTCGGGTCGTGGCCTTCTTTGCCACGTACACTACTACCAAAATATCATTTAACAGCGTTAATTTAACAGCGCTTTTTACCCTTATGCTGTTAAAGATATCAAATATAATATATTACAGCGCTTATAATAAACGCGCTATCATAAATGCTCACATTACAGCGCTTACTGGATATGCCCTGTCATATTTGCAGATGTATAACAGCGCTCCAACAACCAACGCTGTCAAATAATATACGAAAAAAAACCTAACACACTCTCAAAACATAAAACAACCGGTTTCTTCCTCCCTCGTTTCTTCCCTGCAAAACCCTTATACTGTCAATACTCTCAAATCTCAATCGATCACAACCGGAGCGGCGAAACCCACGGCGGAGATTTCCTTCACGCGGTGTTTCCCTTCGCCTGGCGGCGCTTCCCTTCTCACGGCAAGATTGAATAATCGAATTGGAAGGTATACTCCATAGAGTTCAATGAATTTTGCTAATTTATGTTTGGGTTGTTTTTAATTTTGCGTTTTAAGTGTGCGATTATAGTTAATTAATTTTCTTGAATTGGTTTTGTTGGGAAGGGGGTTTGAATTCAATTACGATTGTTTTAATTATGGGTTTTAGGTTTTGGTTTTCCTCACTCCCGTCGTTCTTCGCGAATGCCGTCGCATAATTTCCCAGGGCGAGGTCGTTTTCCCTCTCCTCCTTTTTATCTACATTGTTTCTTTGATTCGTTGATAAAAACTAGGGTTTGGGGTTTCAATTTGTTGGGCAAGGGTTTAAATTTTGAAGCCCGAATTTGTAATGAAAACTCTAATTCTAGTCATTTCTTCTTATTTCGTTGCACTAGTCTGAATATACTAATTGATATGCAAGGTTTTGCACATGAATTGTCAATTAGGTCGTTAGGGGTTAGGAATTGGGATAATTATATCCAAGTTAATTATGGAAGCTCATAAGTAACTTCTCTTATCTATTCATAGTATTCACTTGTCCTGAAACTATCAGCACCACTCCATTAGTGCTCCATCCAAATTTCCAGTGTTGCATAATCAGTCAAAGTTTCTCTTTATGTTTGTCTGGTACACTATTAAGTTCTCTTCATCCCTTCAATGCAGATTTTCTCATACTATTTTTCACAGAGGCTCTCTTCTACTGTGGTGTTGCAATTTTTCTTTTCCTTATTCACTCTCTGCGTAGCCCCGCTAAAAGTGTTCCTGTTGCCAGCAGTTGTGGAAAGCTAACCACTCAGATGGGGAGTCGTATATCTTCAGTTGCTATTTTGATGCTTAGACAGCTTAGTCTTATTATTCCAATGGTGACAATGGTTTTGTTTGGCCGTGGACTGGTCCTGCAGCATCAGCTTCTCTAGCTCCTTACTTGGTTGGTATTGTTGTACAGTTTGCATTCGAGCAGTATGTAAAATATACGAAATCACCTTCCTGGGCCGTCATTCTAGTTGTATTTCAGGTGAAGTACTCTAAAATGTTTCCTTTGATTAGTACAAAGTATTGAACTATAGACTAATATTCTTCCCTTAGCTTGCCTTTTTATACCTTTTGTGAGAAATATACTTGATTTGTGTTTGTAATGTATGTGAGCTTATTGATATTAGTTGCACCAGATTATGGTTCGTTTTCCAAAATTTTTCCTTGATTCGTTTTTTGGGAATTGACGATTAGTGCTTTGACATGAAACATGTATATAGACTGCATCAACTAAATCGAGCCGCACAACTGGTAACTGCTCTATCTTTCACAGTTAGAGGAGCTGAGATTAATGCACACAACTTGGCCAATGGCTGCAGCTAAAGAACCTCCCCCAACTCTGGAAACAACAATGTCCTACTTACAAAAATATCTTAGTGAACGACCCAAATGAAGTACGAAGAATGAAACAACCAGTTTACATACAAAGAAAAGGGTTGCAAGAGCTACTTAGTACTCCATGTTTAGACGGATCAGGAAGTTAACTTAGTACATAGTAATTTGAGTTACTTAGTACTCCATGTTTAGACGGATCAGGAAGTTAACTTAGTACATAGTAATTTGAGTTACTTAGTACTCCATGTTTAGACGGATCAGGAAGTTAACTTAGTACATAGTAATTTGAGTTACTTAGTACTCCATGTTTAGACGGATCAGGAAGTTAACTTAGTTATGTTCTTCTAACAAGAGCCTTATAGGCTGGCTTTGCCATGTTGCAGAGGGACTAGTGAGATTCCCCCCCCCCCCTGCACCCACCCCTTATAGTTTCTTCTGTTAGCATAAAGAAGTTACTTTCTTTTTCAAGCTGGCAGTAGCTTCTTTATGCTGACACAAAAGACAACTATAACCCAATAGTAATCAGTGAGGAGGTTCAGATGCAATGGCAGTTCTGCCACAGCAACTATAACCCAAGCTTGCAGTAGCTTCTTCATTTTTCTCACTTATATATTGTACTGTGAAATTTAACAGAGTAGATTTACACTTTATCTCCCTCAGGCCTCAACAATGATGTTTTATGTTTGTATCGATATTCAAGTGTTGGTTTGTTTTTAAGGGTGAAAAAGTGATACTTTCTTGTTGTAAGTGTAGGTGTGACTCATGTGGGTGGAGACATGTTCAAATTGATTCCTTCTGGTGATGCAATCTTCATGAAGGTACTTCCTCTTCATTGTTTGTTTAGTATACATCCTTACATATTTGTTGCCGTGATTTATAACCTCTTCTGCCTAACATTTAATTGATCAGTCTAAATGCATATAAAGATACGGTGATGCATCAGACCTAAAGGACGTAAAATTTAATGGAAAGAACTAAAAATGAACGTAACTAAGAGAAATGGAGCTTCAGTTAGTTAGAAGTTAGTTAGAAAAGTTTGCCTATAATTTACAGCCAGCTCTTATTTATATTTCCTGGTGAAATGCAGGAAGCTCTTGTTGTTTAGTTATGTTTTAAATCTGACTTAATTTTTTGTTTTGACAACGTAACAAACAACAAAAGGGCTAAAGTATTGCGGTTGTAGCTAGGCTATGGGCCTGAATTAATAAAGAACGACGCACTTTCCTACACAAAATATAATCAAAATTAAGAGTAACAGATCGTATGTCCTTTATTATTATGTGTATCTTCTAGGGTGCTTGTGTTGGATCATAAACGGAAGTGATGATATTGATGCAGTCTGTGATGATTTCTATATGCTTGCAAATAACTCAAAATGGACCTAGTTAACCCAAAAGAACCTCCAAAAGACTCTTTATTTATGTTTACAATTACAATAATAAATAATAATATATCTAACTTAATTTAGATAATCGACTGAAATTGACTTATTAAATATCGTTATATGGTAAGAAGAAGGCGTCTATAAGAAGAGTACCTGGTTTTCAGGTGGTTATCTAGAATTTAGTATCTTTTGCCTTTTTCTGTTCAACTCCTATGTTATCTACCTAGTGTTTCGTAATGTTGATTTTGATTTGTGTATAATTGACCCAGTTTTCCCCTGGTGACCCAAGCAAGTTCATGGTTACTATTGCTGATTCCCAGGTCCGGATACTGGGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNAGGAGTTAATGGAAGAATGCAAGGGCATGTTAGTCATTACACTATTGGATGAATAGTGAAAATCAAGTTCTCACTTTTAAAGGTTGTAGGATGAAGGTGCAATTTGTAATTAGTTTTATATTTATTTTTGTTCAGCTTATAGTTAGCCCCCCCTTATAGTTAGTGGCGGAACTAGGACTAGGTTTCATGGTGCTCTTTCCAACCGAGCTTACCAACAGGAGCCTCATGCAGGAATTGGTAAAGAAGTGGAAGTTCTCGTCTGA

mRNA sequence

ATGGTGCTCTTTCCAACCGAGCTTACCAACAGGAGCCTCATGCAGGAATTGGTAAAGAAGTGGAAGTTCTCGTCTGAATTGCCTCTGAAATTAGGAAGGGGAATTTGCATTCGAGCAGTATGTAAAATATACGAAATCACCTTCCTGGGCCGTCATTCTAGTTGTATTTCAGGTGTGACTCATGTGGGTGGAGACATGTTCAAATTGATTCCTTCTGGTGATGCAATCTTCATGAAGTTTTCCCCTGGTGACCCAAGCAAGTTCATGGTTACTATTGCTGATTCCCAGCCCCCCCTTATAGTTAGTGGCGGAACTAGGACTAGGTTTCATGGTGCTCTTTCCAACCGAGCTTACCAACAGGAGCCTCATGCAGGAATTGGTAAAGAAGTGGAAGTTCTCGTCTGA

Coding sequence (CDS)

ATGGTGCTCTTTCCAACCGAGCTTACCAACAGGAGCCTCATGCAGGAATTGGTAAAGAAGTGGAAGTTCTCGTCTGAATTGCCTCTGAAATTAGGAAGGGGAATTTGCATTCGAGCAGTATGTAAAATATACGAAATCACCTTCCTGGGCCGTCATTCTAGTTGTATTTCAGGTGTGACTCATGTGGGTGGAGACATGTTCAAATTGATTCCTTCTGGTGATGCAATCTTCATGAAGTTTTCCCCTGGTGACCCAAGCAAGTTCATGGTTACTATTGCTGATTCCCAGCCCCCCCTTATAGTTAGTGGCGGAACTAGGACTAGGTTTCATGGTGCTCTTTCCAACCGAGCTTACCAACAGGAGCCTCATGCAGGAATTGGTAAAGAAGTGGAAGTTCTCGTCTGA

Protein sequence

MVLFPTELTNRSLMQELVKKWKFSSELPLKLGRGICIRAVCKIYEITFLGRHSSCISGVTHVGGDMFKLIPSGDAIFMKFSPGDPSKFMVTIADSQPPLIVSGGTRTRFHGALSNRAYQQEPHAGIGKEVEVLV

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Spo14025.1	Spo14025.1	mRNA

Homology

[Close]

BLAST of Spo14025.1 vs. NCBI nr
Match: gi|902172613|gb|KNA08151.1| (hypothetical protein SOVF_164990 [Spinacia oleracea])

HSP 1 Score: 66.6 bits (161), Expect = 3.700e-8
Identity = 31/31 (100.00%), Postives = 31/31 (100.00%), Query Frame = 1

		  
Query: 66 MFKLIPSGDAIFMKFSPGDPSKFMVTIADSQ 97
          MFKLIPSGDAIFMKFSPGDPSKFMVTIADSQ
Sbjct: 1  MFKLIPSGDAIFMKFSPGDPSKFMVTIADSQ 31

[Close]

BLAST of Spo14025.1 vs. UniProtKB/TrEMBL
Match: A0A0K9QNL1_SPIOL (Uncharacterized protein OS=Spinacia oleracea GN=SOVF_164990 PE=4 SV=1)

HSP 1 Score: 66.6 bits (161), Expect = 2.600e-8
Identity = 31/31 (100.00%), Postives = 31/31 (100.00%), Query Frame = 1

		  
Query: 66 MFKLIPSGDAIFMKFSPGDPSKFMVTIADSQ 97
          MFKLIPSGDAIFMKFSPGDPSKFMVTIADSQ
Sbjct: 1  MFKLIPSGDAIFMKFSPGDPSKFMVTIADSQ 31

The following BLAST results are available for this feature:

BLAST of Spo14025.1 vs. NCBI nr
BLAST of Spo14025.1 vs. UniProtKB/TrEMBL
BLAST of Spo14025.1 vs. ExPASy Swiss-Prot
BLAST of Spo14025.1 vs. TAIR (Arabidopsis)

BLAST of Spo14025.1 vs. NCBI nr
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. NCBI nr)
Total hits: 1

Position :

Zoom :

x 1


Match Name	E-value	Identity	Description
gi\|902172613\|gb\|KNA08151.1\|	3.7e-8	100.	hypothetical protein SOVF_1649...	[more]

BLAST of Spo14025.1 vs. UniProtKB/TrEMBL
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. UniprotKB/TrEMBL)
Total hits: 1

Position :

Zoom :

x 1


Match Name	E-value	Identity	Description
A0A0K9QNL1_SPIOL	2.6e-8	100.	Uncharacterized protein OS=Spi...	[more]

BLAST of Spo14025.1 vs. ExPASy Swiss-Prot
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. ExPASy SwissProt)
Total hits: 0

Position :

Zoom :

x 1


Match Name	E-value	Identity	Description

BLAST of Spo14025.1 vs. TAIR (Arabidopsis)
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. TAIR)
Total hits: 0

Position :

Zoom :

x 1


Match Name	E-value	Identity	Description

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
molecular_function	GO:0008171	O-methyltransferase activity

RNA-Seq Expression

Co-expression


Gene	r value	Expression
Spo17942	0.97	Barchart \| Table
Spo04590	0.95	Barchart \| Table
Spo25713	0.94	Barchart \| Table
Spo06508	0.66	Barchart \| Table