Spo00076 (gene)

Overview
NameSpo00076
Typegene
OrganismSpinacia oleracea (Spinach)
DescriptionHistone H2B
LocationSuper_scaffold_70 : 644695 .. 645126 (-)
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGCGCCCAAGGCAGAGAAGAAGCCCGCAGAGGAGAAGAAGGCCGCCGCCGCTGAGAAAGCCCCGGCAGAGAAGAAGCCAAAGGCCGGGAAGAAACTCCCAAAAGAAGCCGGAGCAGCTGCCGGAGACAAGAAGAAGAAGAGGCACAAGAAGAGCGTTGAAACCTACAAGATCTACATCTTCAAGGTTCTCAAGCAAGTTCACCCTGACATCGGAATCTCCAGTAAGGCAATGAGCATCATGAACAGCTTCATCAACGATATATTCGAGAAGCTTGCTCAGGAATCCGCCAGACTTGCTCGTTACAACAAGAAGCCTACCATCACTTCCCGAGAGATTCAGACTGCTGTCAGGCTTGTTCTTCCCGGTGAACTCGCTAAGCACGCCGTTTCTGAGGGTACTAAGGCTGTTACCAAGTTTACTAGCTCTTAA

mRNA sequence

ATGGCGCCCAAGGCAGAGAAGAAGCCCGCAGAGGAGAAGAAGGCCGCCGCCGCTGAGAAAGCCCCGGCAGAGAAGAAGCCAAAGGCCGGGAAGAAACTCCCAAAAGAAGCCGGAGCAGCTGCCGGAGACAAGAAGAAGAAGAGGCACAAGAAGAGCGTTGAAACCTACAAGATCTACATCTTCAAGGTTCTCAAGCAAGTTCACCCTGACATCGGAATCTCCAGTAAGGCAATGAGCATCATGAACAGCTTCATCAACGATATATTCGAGAAGCTTGCTCAGGAATCCGCCAGACTTGCTCGTTACAACAAGAAGCCTACCATCACTTCCCGAGAGATTCAGACTGCTGTCAGGCTTGTTCTTCCCGGTGAACTCGCTAAGCACGCCGTTTCTGAGGGTACTAAGGCTGTTACCAAGTTTACTAGCTCTTAA

Coding sequence (CDS)

ATGGCGCCCAAGGCAGAGAAGAAGCCCGCAGAGGAGAAGAAGGCCGCCGCCGCTGAGAAAGCCCCGGCAGAGAAGAAGCCAAAGGCCGGGAAGAAACTCCCAAAAGAAGCCGGAGCAGCTGCCGGAGACAAGAAGAAGAAGAGGCACAAGAAGAGCGTTGAAACCTACAAGATCTACATCTTCAAGGTTCTCAAGCAAGTTCACCCTGACATCGGAATCTCCAGTAAGGCAATGAGCATCATGAACAGCTTCATCAACGATATATTCGAGAAGCTTGCTCAGGAATCCGCCAGACTTGCTCGTTACAACAAGAAGCCTACCATCACTTCCCGAGAGATTCAGACTGCTGTCAGGCTTGTTCTTCCCGGTGAACTCGCTAAGCACGCCGTTTCTGAGGGTACTAAGGCTGTTACCAAGTTTACTAGCTCTTAA

Protein sequence

MAPKAEKKPAEEKKAAAAEKAPAEKKPKAGKKLPKEAGAAAGDKKKKRHKKSVETYKIYIFKVLKQVHPDIGISSKAMSIMNSFINDIFEKLAQESARLARYNKKPTITSREIQTAVRLVLPGELAKHAVSEGTKAVTKFTSS
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Spo00076.1Spo00076.1mRNA


Homology
[Close]
BLAST of Spo00076.1 vs. NCBI nr
Match: gi|902233050|gb|KNA22911.1| (hypothetical protein SOVF_029960 [Spinacia oleracea])

HSP 1 Score: 255.0 bits (650), Expect = 7.800e-65
Identity = 143/143 (100.00%), Postives = 143/143 (100.00%), Query Frame = 1 

		  

Query: 1   MAPKAEKKPAEEKKAAAAEKAPAEKKPKAGKKLPKEAGAAAGDKKKKRHKKSVETYKIYI 60
           MAPKAEKKPAEEKKAAAAEKAPAEKKPKAGKKLPKEAGAAAGDKKKKRHKKSVETYKIYI
Sbjct: 1   MAPKAEKKPAEEKKAAAAEKAPAEKKPKAGKKLPKEAGAAAGDKKKKRHKKSVETYKIYI 60

Query: 61  FKVLKQVHPDIGISSKAMSIMNSFINDIFEKLAQESARLARYNKKPTITSREIQTAVRLV 120
           FKVLKQVHPDIGISSKAMSIMNSFINDIFEKLAQESARLARYNKKPTITSREIQTAVRLV
Sbjct: 61  FKVLKQVHPDIGISSKAMSIMNSFINDIFEKLAQESARLARYNKKPTITSREIQTAVRLV 120

Query: 121 LPGELAKHAVSEGTKAVTKFTSS 144
           LPGELAKHAVSEGTKAVTKFTSS
Sbjct: 121 LPGELAKHAVSEGTKAVTKFTSS 143
[Close]
BLAST of Spo00076.1 vs. NCBI nr
Match: gi|902185838|gb|KNA10559.1| (hypothetical protein SOVF_143230 [Spinacia oleracea])

HSP 1 Score: 248.8 bits (634), Expect = 5.600e-63
Identity = 143/148 (96.62%), Postives = 143/148 (96.62%), Query Frame = 1 

		  

Query: 1   MAPKAE-----KKPAEEKKAAAAEKAPAEKKPKAGKKLPKEAGAAAGDKKKKRHKKSVET 60
           MAPKAE     KKPAEEKKAAAAEKAPAEKKPKAGKKLPKEAGAAAGDKKKKRHKKSVET
Sbjct: 1   MAPKAEKKPAEKKPAEEKKAAAAEKAPAEKKPKAGKKLPKEAGAAAGDKKKKRHKKSVET 60

Query: 61  YKIYIFKVLKQVHPDIGISSKAMSIMNSFINDIFEKLAQESARLARYNKKPTITSREIQT 120
           YKIYIFKVLKQVHPDIGISSKAMSIMNSFINDIFEKLAQESARLARYNKKPTITSREIQT
Sbjct: 61  YKIYIFKVLKQVHPDIGISSKAMSIMNSFINDIFEKLAQESARLARYNKKPTITSREIQT 120

Query: 121 AVRLVLPGELAKHAVSEGTKAVTKFTSS 144
           AVRLVLPGELAKHAVSEGTKAVTKFTSS
Sbjct: 121 AVRLVLPGELAKHAVSEGTKAVTKFTSS 148
[Close]
BLAST of Spo00076.1 vs. NCBI nr
Match: gi|902184879|gb|KNA10386.1| (hypothetical protein SOVF_144860 [Spinacia oleracea])

HSP 1 Score: 248.8 bits (634), Expect = 5.600e-63
Identity = 143/148 (96.62%), Postives = 143/148 (96.62%), Query Frame = 1 

		  

Query: 1   MAPKAEKKPA-----EEKKAAAAEKAPAEKKPKAGKKLPKEAGAAAGDKKKKRHKKSVET 60
           MAPKAEKKPA     EEKKAAAAEKAPAEKKPKAGKKLPKEAGAAAGDKKKKRHKKSVET
Sbjct: 1   MAPKAEKKPAEKKPVEEKKAAAAEKAPAEKKPKAGKKLPKEAGAAAGDKKKKRHKKSVET 60

Query: 61  YKIYIFKVLKQVHPDIGISSKAMSIMNSFINDIFEKLAQESARLARYNKKPTITSREIQT 120
           YKIYIFKVLKQVHPDIGISSKAMSIMNSFINDIFEKLAQESARLARYNKKPTITSREIQT
Sbjct: 61  YKIYIFKVLKQVHPDIGISSKAMSIMNSFINDIFEKLAQESARLARYNKKPTITSREIQT 120

Query: 121 AVRLVLPGELAKHAVSEGTKAVTKFTSS 144
           AVRLVLPGELAKHAVSEGTKAVTKFTSS
Sbjct: 121 AVRLVLPGELAKHAVSEGTKAVTKFTSS 148
[Close]
BLAST of Spo00076.1 vs. NCBI nr
Match: gi|902233045|gb|KNA22906.1| (hypothetical protein SOVF_029910 [Spinacia oleracea])

HSP 1 Score: 248.1 bits (632), Expect = 9.600e-63
Identity = 139/139 (100.00%), Postives = 139/139 (100.00%), Query Frame = 1 

		  

Query: 5   AEKKPAEEKKAAAAEKAPAEKKPKAGKKLPKEAGAAAGDKKKKRHKKSVETYKIYIFKVL 64
           AEKKPAEEKKAAAAEKAPAEKKPKAGKKLPKEAGAAAGDKKKKRHKKSVETYKIYIFKVL
Sbjct: 10  AEKKPAEEKKAAAAEKAPAEKKPKAGKKLPKEAGAAAGDKKKKRHKKSVETYKIYIFKVL 69

Query: 65  KQVHPDIGISSKAMSIMNSFINDIFEKLAQESARLARYNKKPTITSREIQTAVRLVLPGE 124
           KQVHPDIGISSKAMSIMNSFINDIFEKLAQESARLARYNKKPTITSREIQTAVRLVLPGE
Sbjct: 70  KQVHPDIGISSKAMSIMNSFINDIFEKLAQESARLARYNKKPTITSREIQTAVRLVLPGE 129

Query: 125 LAKHAVSEGTKAVTKFTSS 144
           LAKHAVSEGTKAVTKFTSS
Sbjct: 130 LAKHAVSEGTKAVTKFTSS 148
[Close]
BLAST of Spo00076.1 vs. NCBI nr
Match: gi|657986068|ref|XP_008385152.1| (PREDICTED: probable histone H2B.1 [Malus domestica])

HSP 1 Score: 240.0 bits (611), Expect = 2.600e-60
Identity = 138/148 (93.24%), Postives = 140/148 (94.59%), Query Frame = 1 

		  

Query: 1   MAPKAE-----KKPAEEKKAAAAEKAPAEKKPKAGKKLPKEAGAAAGDKKKKRHKKSVET 60
           MAPKAE     KKPAEEKK+A AEKAPAEKKPKAGKKLPKEAGAAAGDKKKKR KKSVET
Sbjct: 1   MAPKAEKKPAEKKPAEEKKSAVAEKAPAEKKPKAGKKLPKEAGAAAGDKKKKRSKKSVET 60

Query: 61  YKIYIFKVLKQVHPDIGISSKAMSIMNSFINDIFEKLAQESARLARYNKKPTITSREIQT 120
           YKIYIFKVLKQVHPDIGISSKAM IMNSFINDIFEKLAQES+RLARYNKKPTITSREIQT
Sbjct: 61  YKIYIFKVLKQVHPDIGISSKAMGIMNSFINDIFEKLAQESSRLARYNKKPTITSREIQT 120

Query: 121 AVRLVLPGELAKHAVSEGTKAVTKFTSS 144
           AVRLVLPGELAKHAVSEGTKAVTKFTSS
Sbjct: 121 AVRLVLPGELAKHAVSEGTKAVTKFTSS 148
[Close]
BLAST of Spo00076.1 vs. UniProtKB/TrEMBL
Match: A0A0K9RTN6_SPIOL (Histone H2B OS=Spinacia oleracea GN=SOVF_029960 PE=3 SV=1)

HSP 1 Score: 255.0 bits (650), Expect = 5.500e-65
Identity = 143/143 (100.00%), Postives = 143/143 (100.00%), Query Frame = 1 

		  

Query: 1   MAPKAEKKPAEEKKAAAAEKAPAEKKPKAGKKLPKEAGAAAGDKKKKRHKKSVETYKIYI 60
           MAPKAEKKPAEEKKAAAAEKAPAEKKPKAGKKLPKEAGAAAGDKKKKRHKKSVETYKIYI
Sbjct: 1   MAPKAEKKPAEEKKAAAAEKAPAEKKPKAGKKLPKEAGAAAGDKKKKRHKKSVETYKIYI 60

Query: 61  FKVLKQVHPDIGISSKAMSIMNSFINDIFEKLAQESARLARYNKKPTITSREIQTAVRLV 120
           FKVLKQVHPDIGISSKAMSIMNSFINDIFEKLAQESARLARYNKKPTITSREIQTAVRLV
Sbjct: 61  FKVLKQVHPDIGISSKAMSIMNSFINDIFEKLAQESARLARYNKKPTITSREIQTAVRLV 120

Query: 121 LPGELAKHAVSEGTKAVTKFTSS 144
           LPGELAKHAVSEGTKAVTKFTSS
Sbjct: 121 LPGELAKHAVSEGTKAVTKFTSS 143
[Close]
BLAST of Spo00076.1 vs. UniProtKB/TrEMBL
Match: A0A0K9QTH0_SPIOL (Histone H2B OS=Spinacia oleracea GN=SOVF_143230 PE=3 SV=1)

HSP 1 Score: 248.8 bits (634), Expect = 3.900e-63
Identity = 143/148 (96.62%), Postives = 143/148 (96.62%), Query Frame = 1 

		  

Query: 1   MAPKAE-----KKPAEEKKAAAAEKAPAEKKPKAGKKLPKEAGAAAGDKKKKRHKKSVET 60
           MAPKAE     KKPAEEKKAAAAEKAPAEKKPKAGKKLPKEAGAAAGDKKKKRHKKSVET
Sbjct: 1   MAPKAEKKPAEKKPAEEKKAAAAEKAPAEKKPKAGKKLPKEAGAAAGDKKKKRHKKSVET 60

Query: 61  YKIYIFKVLKQVHPDIGISSKAMSIMNSFINDIFEKLAQESARLARYNKKPTITSREIQT 120
           YKIYIFKVLKQVHPDIGISSKAMSIMNSFINDIFEKLAQESARLARYNKKPTITSREIQT
Sbjct: 61  YKIYIFKVLKQVHPDIGISSKAMSIMNSFINDIFEKLAQESARLARYNKKPTITSREIQT 120

Query: 121 AVRLVLPGELAKHAVSEGTKAVTKFTSS 144
           AVRLVLPGELAKHAVSEGTKAVTKFTSS
Sbjct: 121 AVRLVLPGELAKHAVSEGTKAVTKFTSS 148
[Close]
BLAST of Spo00076.1 vs. UniProtKB/TrEMBL
Match: A0A0K9QV24_SPIOL (Histone H2B OS=Spinacia oleracea GN=SOVF_037580 PE=3 SV=1)

HSP 1 Score: 248.8 bits (634), Expect = 3.900e-63
Identity = 143/148 (96.62%), Postives = 143/148 (96.62%), Query Frame = 1 

		  

Query: 1   MAPKAEKKPA-----EEKKAAAAEKAPAEKKPKAGKKLPKEAGAAAGDKKKKRHKKSVET 60
           MAPKAEKKPA     EEKKAAAAEKAPAEKKPKAGKKLPKEAGAAAGDKKKKRHKKSVET
Sbjct: 1   MAPKAEKKPAEKKPVEEKKAAAAEKAPAEKKPKAGKKLPKEAGAAAGDKKKKRHKKSVET 60

Query: 61  YKIYIFKVLKQVHPDIGISSKAMSIMNSFINDIFEKLAQESARLARYNKKPTITSREIQT 120
           YKIYIFKVLKQVHPDIGISSKAMSIMNSFINDIFEKLAQESARLARYNKKPTITSREIQT
Sbjct: 61  YKIYIFKVLKQVHPDIGISSKAMSIMNSFINDIFEKLAQESARLARYNKKPTITSREIQT 120

Query: 121 AVRLVLPGELAKHAVSEGTKAVTKFTSS 144
           AVRLVLPGELAKHAVSEGTKAVTKFTSS
Sbjct: 121 AVRLVLPGELAKHAVSEGTKAVTKFTSS 148
[Close]
BLAST of Spo00076.1 vs. UniProtKB/TrEMBL
Match: A0A0K9RTN1_SPIOL (Histone H2B OS=Spinacia oleracea GN=SOVF_029910 PE=3 SV=1)

HSP 1 Score: 248.1 bits (632), Expect = 6.700e-63
Identity = 139/139 (100.00%), Postives = 139/139 (100.00%), Query Frame = 1 

		  

Query: 5   AEKKPAEEKKAAAAEKAPAEKKPKAGKKLPKEAGAAAGDKKKKRHKKSVETYKIYIFKVL 64
           AEKKPAEEKKAAAAEKAPAEKKPKAGKKLPKEAGAAAGDKKKKRHKKSVETYKIYIFKVL
Sbjct: 10  AEKKPAEEKKAAAAEKAPAEKKPKAGKKLPKEAGAAAGDKKKKRHKKSVETYKIYIFKVL 69

Query: 65  KQVHPDIGISSKAMSIMNSFINDIFEKLAQESARLARYNKKPTITSREIQTAVRLVLPGE 124
           KQVHPDIGISSKAMSIMNSFINDIFEKLAQESARLARYNKKPTITSREIQTAVRLVLPGE
Sbjct: 70  KQVHPDIGISSKAMSIMNSFINDIFEKLAQESARLARYNKKPTITSREIQTAVRLVLPGE 129

Query: 125 LAKHAVSEGTKAVTKFTSS 144
           LAKHAVSEGTKAVTKFTSS
Sbjct: 130 LAKHAVSEGTKAVTKFTSS 148
[Close]
BLAST of Spo00076.1 vs. UniProtKB/TrEMBL
Match: A0A072UNJ0_MEDTR (Histone H2B OS=Medicago truncatula GN=MTR_4g088025 PE=3 SV=1)

HSP 1 Score: 238.8 bits (608), Expect = 4.100e-60
Identity = 132/143 (92.31%), Postives = 139/143 (97.20%), Query Frame = 1 

		  

Query: 1   MAPKAEKKPAEEKKAAAAEKAPAEKKPKAGKKLPKEAGAAAGDKKKKRHKKSVETYKIYI 60
           MAPK EKKPAEEKK+  AEKAPAEKKPKAGKKLPKE+G+A+G+KKKKR+KKSVETYKIYI
Sbjct: 1   MAPKGEKKPAEEKKSTVAEKAPAEKKPKAGKKLPKESGSASGEKKKKRNKKSVETYKIYI 60

Query: 61  FKVLKQVHPDIGISSKAMSIMNSFINDIFEKLAQESARLARYNKKPTITSREIQTAVRLV 120
           FKVLKQVHPDIGISSKAM IMNSFINDIFEKLAQES+RLARYNKKPTITSREIQTAVRLV
Sbjct: 61  FKVLKQVHPDIGISSKAMGIMNSFINDIFEKLAQESSRLARYNKKPTITSREIQTAVRLV 120

Query: 121 LPGELAKHAVSEGTKAVTKFTSS 144
           LPGELAKHAVSEGTKAVTKFTSS
Sbjct: 121 LPGELAKHAVSEGTKAVTKFTSS 143
[Close]
BLAST of Spo00076.1 vs. ExPASy Swiss-Prot
Match: H2B_GOSHI (Histone H2B OS=Gossypium hirsutum GN=HIS2B PE=2 SV=3)

HSP 1 Score: 234.6 bits (597), Expect = 6.900e-61
Identity = 135/147 (91.84%), Postives = 138/147 (93.88%), Query Frame = 1 

		  

Query: 1   MAPKAEKKPAEEK----KAAAAEKAPAEKKPKAGKKLPKEAGAAAGDKKKKRHKKSVETY 60
           MAPKAEKKPAE+K    K A AEKAPAEKKPKAGKKLPKE GAAAGDKKKKR KKSVETY
Sbjct: 1   MAPKAEKKPAEKKPAEEKKAVAEKAPAEKKPKAGKKLPKEGGAAAGDKKKKRVKKSVETY 60

Query: 61  KIYIFKVLKQVHPDIGISSKAMSIMNSFINDIFEKLAQESARLARYNKKPTITSREIQTA 120
           KIYIFKVLKQVHPDIGISSKAM IMNSFINDIFEKLAQE++RLARYNKKPTITSREIQTA
Sbjct: 61  KIYIFKVLKQVHPDIGISSKAMGIMNSFINDIFEKLAQEASRLARYNKKPTITSREIQTA 120

Query: 121 VRLVLPGELAKHAVSEGTKAVTKFTSS 144
           VRLVLPGELAKHAVSEGTKAVTKFTSS
Sbjct: 121 VRLVLPGELAKHAVSEGTKAVTKFTSS 147
[Close]
BLAST of Spo00076.1 vs. ExPASy Swiss-Prot
Match: H2B1_MEDTR (Probable histone H2B.1 OS=Medicago truncatula PE=3 SV=3)

HSP 1 Score: 234.2 bits (596), Expect = 9.000e-61
Identity = 134/148 (90.54%), Postives = 138/148 (93.24%), Query Frame = 1 

		  

Query: 1   MAPK-----AEKKPAEEKKAAAAEKAPAEKKPKAGKKLPKEAGAAAGDKKKKRHKKSVET 60
           MAPK     AEKKPAEEKK+  AEKAPAEKKPKAGKKLPKE G+AAG+KKKKR KKSVET
Sbjct: 1   MAPKGEKKPAEKKPAEEKKSTVAEKAPAEKKPKAGKKLPKEGGSAAGEKKKKRSKKSVET 60

Query: 61  YKIYIFKVLKQVHPDIGISSKAMSIMNSFINDIFEKLAQESARLARYNKKPTITSREIQT 120
           YKIYIFKVLKQVHPDIGISSKAM IMNSFINDIFEKLAQES+RLARYNKKPTITSREIQT
Sbjct: 61  YKIYIFKVLKQVHPDIGISSKAMGIMNSFINDIFEKLAQESSRLARYNKKPTITSREIQT 120

Query: 121 AVRLVLPGELAKHAVSEGTKAVTKFTSS 144
           AVRLVLPGELAKHAVSEGTKAVTKFTSS
Sbjct: 121 AVRLVLPGELAKHAVSEGTKAVTKFTSS 148
[Close]
BLAST of Spo00076.1 vs. ExPASy Swiss-Prot
Match: H2B2_MEDTR (Probable histone H2B.2 OS=Medicago truncatula PE=3 SV=3)

HSP 1 Score: 230.3 bits (586), Expect = 1.300e-59
Identity = 132/148 (89.19%), Postives = 136/148 (91.89%), Query Frame = 1 

		  

Query: 1   MAPK-----AEKKPAEEKKAAAAEKAPAEKKPKAGKKLPKEAGAAAGDKKKKRHKKSVET 60
           MAPK     AEKKPAEEKK+  AEKAPAEKKPKAGKKLPKE G+AAG+KKKKR KKSVET
Sbjct: 1   MAPKGEKKPAEKKPAEEKKSTVAEKAPAEKKPKAGKKLPKEGGSAAGEKKKKRSKKSVET 60

Query: 61  YKIYIFKVLKQVHPDIGISSKAMSIMNSFINDIFEKLAQESARLARYNKKPTITSREIQT 120
           YKIYIFKVLKQVHPDIGISSKAM IMNSFINDIFEKL QES+RLARYNKKPTITSREIQT
Sbjct: 61  YKIYIFKVLKQVHPDIGISSKAMGIMNSFINDIFEKLTQESSRLARYNKKPTITSREIQT 120

Query: 121 AVRLVLPGELAKHAVSEGTKAVTKFTSS 144
           AVRLVLPGELAKH VSEGTKAVTKFTSS
Sbjct: 121 AVRLVLPGELAKHDVSEGTKAVTKFTSS 148
[Close]
BLAST of Spo00076.1 vs. ExPASy Swiss-Prot
Match: H2B7_ARATH (Histone H2B.7 OS=Arabidopsis thaliana GN=At3g46030 PE=1 SV=3)

HSP 1 Score: 222.2 bits (565), Expect = 3.500e-57
Identity = 130/146 (89.04%), Postives = 135/146 (92.47%), Query Frame = 1 

		  

Query: 1   MAPKAEKKPAEEK---KAAAAEKAPAEKKPKAGKKLPKEAGAAAGDKKKKRHKKSVETYK 60
           MAPKAEKKPAE+K   + + AEKAPAEKKPKAGKKLPKEAGA  GDKKKK  KKSVETYK
Sbjct: 1   MAPKAEKKPAEKKPVEEKSKAEKAPAEKKPKAGKKLPKEAGAG-GDKKKKMKKKSVETYK 60

Query: 61  IYIFKVLKQVHPDIGISSKAMSIMNSFINDIFEKLAQESARLARYNKKPTITSREIQTAV 120
           IYIFKVLKQVHPDIGISSKAM IMNSFINDIFEKLA ES++LARYNKKPTITSREIQTAV
Sbjct: 61  IYIFKVLKQVHPDIGISSKAMGIMNSFINDIFEKLASESSKLARYNKKPTITSREIQTAV 120

Query: 121 RLVLPGELAKHAVSEGTKAVTKFTSS 144
           RLVLPGELAKHAVSEGTKAVTKFTSS
Sbjct: 121 RLVLPGELAKHAVSEGTKAVTKFTSS 145
[Close]
BLAST of Spo00076.1 vs. ExPASy Swiss-Prot
Match: H2B11_ARATH (Histone H2B.11 OS=Arabidopsis thaliana GN=At5g59910 PE=1 SV=5)

HSP 1 Score: 222.2 bits (565), Expect = 3.500e-57
Identity = 131/151 (86.75%), Postives = 136/151 (90.07%), Query Frame = 1 

		  

Query: 1   MAPKAEKKPAEEKKAAA--------AEKAPAEKKPKAGKKLPKEAGAAAGDKKKKRHKKS 60
           MAPKAEKKPAE+K A+         AEKAPAEKKPKAGKKLPKEAGA  GDKKKK  KKS
Sbjct: 1   MAPKAEKKPAEKKPASEKPVEEKSKAEKAPAEKKPKAGKKLPKEAGAG-GDKKKKMKKKS 60

Query: 61  VETYKIYIFKVLKQVHPDIGISSKAMSIMNSFINDIFEKLAQESARLARYNKKPTITSRE 120
           VETYKIYIFKVLKQVHPDIGISSKAM IMNSFINDIFEKLAQE+++LARYNKKPTITSRE
Sbjct: 61  VETYKIYIFKVLKQVHPDIGISSKAMGIMNSFINDIFEKLAQEASKLARYNKKPTITSRE 120

Query: 121 IQTAVRLVLPGELAKHAVSEGTKAVTKFTSS 144
           IQTAVRLVLPGELAKHAVSEGTKAVTKFTSS
Sbjct: 121 IQTAVRLVLPGELAKHAVSEGTKAVTKFTSS 150
[Close]
BLAST of Spo00076.1 vs. TAIR (Arabidopsis)
Match: AT3G46030.1 (Histone superfamily protein)

HSP 1 Score: 222.2 bits (565), Expect = 2.000e-58
Identity = 130/146 (89.04%), Postives = 135/146 (92.47%), Query Frame = 1 

		  

Query: 1   MAPKAEKKPAEEK---KAAAAEKAPAEKKPKAGKKLPKEAGAAAGDKKKKRHKKSVETYK 60
           MAPKAEKKPAE+K   + + AEKAPAEKKPKAGKKLPKEAGA  GDKKKK  KKSVETYK
Sbjct: 1   MAPKAEKKPAEKKPVEEKSKAEKAPAEKKPKAGKKLPKEAGAG-GDKKKKMKKKSVETYK 60

Query: 61  IYIFKVLKQVHPDIGISSKAMSIMNSFINDIFEKLAQESARLARYNKKPTITSREIQTAV 120
           IYIFKVLKQVHPDIGISSKAM IMNSFINDIFEKLA ES++LARYNKKPTITSREIQTAV
Sbjct: 61  IYIFKVLKQVHPDIGISSKAMGIMNSFINDIFEKLASESSKLARYNKKPTITSREIQTAV 120

Query: 121 RLVLPGELAKHAVSEGTKAVTKFTSS 144
           RLVLPGELAKHAVSEGTKAVTKFTSS
Sbjct: 121 RLVLPGELAKHAVSEGTKAVTKFTSS 145
[Close]
BLAST of Spo00076.1 vs. TAIR (Arabidopsis)
Match: AT5G59910.1 (Histone superfamily protein)

HSP 1 Score: 222.2 bits (565), Expect = 2.000e-58
Identity = 131/151 (86.75%), Postives = 136/151 (90.07%), Query Frame = 1 

		  

Query: 1   MAPKAEKKPAEEKKAAA--------AEKAPAEKKPKAGKKLPKEAGAAAGDKKKKRHKKS 60
           MAPKAEKKPAE+K A+         AEKAPAEKKPKAGKKLPKEAGA  GDKKKK  KKS
Sbjct: 1   MAPKAEKKPAEKKPASEKPVEEKSKAEKAPAEKKPKAGKKLPKEAGAG-GDKKKKMKKKS 60

Query: 61  VETYKIYIFKVLKQVHPDIGISSKAMSIMNSFINDIFEKLAQESARLARYNKKPTITSRE 120
           VETYKIYIFKVLKQVHPDIGISSKAM IMNSFINDIFEKLAQE+++LARYNKKPTITSRE
Sbjct: 61  VETYKIYIFKVLKQVHPDIGISSKAMGIMNSFINDIFEKLAQEASKLARYNKKPTITSRE 120

Query: 121 IQTAVRLVLPGELAKHAVSEGTKAVTKFTSS 144
           IQTAVRLVLPGELAKHAVSEGTKAVTKFTSS
Sbjct: 121 IQTAVRLVLPGELAKHAVSEGTKAVTKFTSS 150
[Close]
BLAST of Spo00076.1 vs. TAIR (Arabidopsis)
Match: AT3G45980.1 (Histone superfamily protein)

HSP 1 Score: 221.5 bits (563), Expect = 3.400e-58
Identity = 131/151 (86.75%), Postives = 135/151 (89.40%), Query Frame = 1 

		  

Query: 1   MAPKAEKKPAEEKKAAA--------AEKAPAEKKPKAGKKLPKEAGAAAGDKKKKRHKKS 60
           MAP+AEKKPAE+K AA         AEKAPAEKKPKAGKKLPKEAGA  GDKKKK  KKS
Sbjct: 1   MAPRAEKKPAEKKPAAEKPVEEKSKAEKAPAEKKPKAGKKLPKEAGAG-GDKKKKMKKKS 60

Query: 61  VETYKIYIFKVLKQVHPDIGISSKAMSIMNSFINDIFEKLAQESARLARYNKKPTITSRE 120
           VETYKIYIFKVLKQVHPDIGISSKAM IMNSFINDIFEKLA ES++LARYNKKPTITSRE
Sbjct: 61  VETYKIYIFKVLKQVHPDIGISSKAMGIMNSFINDIFEKLASESSKLARYNKKPTITSRE 120

Query: 121 IQTAVRLVLPGELAKHAVSEGTKAVTKFTSS 144
           IQTAVRLVLPGELAKHAVSEGTKAVTKFTSS
Sbjct: 121 IQTAVRLVLPGELAKHAVSEGTKAVTKFTSS 150
[Close]
BLAST of Spo00076.1 vs. TAIR (Arabidopsis)
Match: AT1G07790.1 (Histone superfamily protein)

HSP 1 Score: 218.0 bits (554), Expect = 3.700e-57
Identity = 129/151 (85.43%), Postives = 135/151 (89.40%), Query Frame = 1 

		  

Query: 1   MAPKAEKKPAEEKKAA--------AAEKAPAEKKPKAGKKLPKEAGAAAGDKKKKRHKKS 60
           MAP+AEKKPAE+K AA        AAEKAPAEKKPKAGKKLP +    AGDKKKKR KK+
Sbjct: 1   MAPRAEKKPAEKKTAAERPVEENKAAEKAPAEKKPKAGKKLPPKE---AGDKKKKRSKKN 60

Query: 61  VETYKIYIFKVLKQVHPDIGISSKAMSIMNSFINDIFEKLAQESARLARYNKKPTITSRE 120
           VETYKIYIFKVLKQVHPDIGISSKAM IMNSFINDIFEKLAQES++LARYNKKPTITSRE
Sbjct: 61  VETYKIYIFKVLKQVHPDIGISSKAMGIMNSFINDIFEKLAQESSKLARYNKKPTITSRE 120

Query: 121 IQTAVRLVLPGELAKHAVSEGTKAVTKFTSS 144
           IQTAVRLVLPGELAKHAVSEGTKAVTKFTSS
Sbjct: 121 IQTAVRLVLPGELAKHAVSEGTKAVTKFTSS 148
[Close]
BLAST of Spo00076.1 vs. TAIR (Arabidopsis)
Match: AT2G28720.1 (Histone superfamily protein)

HSP 1 Score: 213.8 bits (543), Expect = 7.100e-56
Identity = 126/151 (83.44%), Postives = 131/151 (86.75%), Query Frame = 1 

		  

Query: 1   MAPKAEKKPAEEKKAA--------AAEKAPAEKKPKAGKKLPKEAGAAAGDKKKKRHKKS 60
           MAPKA KKPAE+K A          AEKAPAEKKPKAGKKLPKEA     +KKKKR KKS
Sbjct: 1   MAPKAGKKPAEKKPAEKAPAEEEKVAEKAPAEKKPKAGKKLPKEAVTGGVEKKKKRVKKS 60

Query: 61  VETYKIYIFKVLKQVHPDIGISSKAMSIMNSFINDIFEKLAQESARLARYNKKPTITSRE 120
            ETYKIYIFKVLKQVHPDIGISSKAM IMNSFINDIFEKLAQE+++LARYNKKPTITSRE
Sbjct: 61  TETYKIYIFKVLKQVHPDIGISSKAMGIMNSFINDIFEKLAQEASKLARYNKKPTITSRE 120

Query: 121 IQTAVRLVLPGELAKHAVSEGTKAVTKFTSS 144
           IQTAVRLVLPGELAKHAVSEGTKAVTKFTSS
Sbjct: 121 IQTAVRLVLPGELAKHAVSEGTKAVTKFTSS 151
The following BLAST results are available for this feature:
BLAST of Spo00076.1 vs. NCBI nr
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. NCBI nr)
Total hits: 5
Match NameE-valueIdentityDescription
gi|902233050|gb|KNA22911.1|7.8e-65100.hypothetical protein SOVF_0299... [more]
gi|902185838|gb|KNA10559.1|5.6e-6396.6hypothetical protein SOVF_1432... [more]
gi|902184879|gb|KNA10386.1|5.6e-6396.6hypothetical protein SOVF_1448... [more]
gi|902233045|gb|KNA22906.1|9.6e-63100.hypothetical protein SOVF_0299... [more]
gi|657986068|ref|XP_008385152.1|2.6e-6093.2PREDICTED: probable histone H2... [more]
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BLAST of Spo00076.1 vs. UniProtKB/TrEMBL
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. UniprotKB/TrEMBL)
Total hits: 5
Match NameE-valueIdentityDescription
A0A0K9RTN6_SPIOL5.5e-65100.Histone H2B OS=Spinacia olerac... [more]
A0A0K9QTH0_SPIOL3.9e-6396.6Histone H2B OS=Spinacia olerac... [more]
A0A0K9QV24_SPIOL3.9e-6396.6Histone H2B OS=Spinacia olerac... [more]
A0A0K9RTN1_SPIOL6.7e-63100.Histone H2B OS=Spinacia olerac... [more]
A0A072UNJ0_MEDTR4.1e-6092.3Histone H2B OS=Medicago trunca... [more]
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BLAST of Spo00076.1 vs. ExPASy Swiss-Prot
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. ExPASy SwissProt)
Total hits: 5
Match NameE-valueIdentityDescription
H2B_GOSHI6.9e-6191.8Histone H2B OS=Gossypium hirsu... [more]
H2B1_MEDTR9.0e-6190.5Probable histone H2B.1 OS=Medi... [more]
H2B2_MEDTR1.3e-5989.1Probable histone H2B.2 OS=Medi... [more]
H2B7_ARATH3.5e-5789.0Histone H2B.7 OS=Arabidopsis t... [more]
H2B11_ARATH3.5e-5786.7Histone H2B.11 OS=Arabidopsis ... [more]
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BLAST of Spo00076.1 vs. TAIR (Arabidopsis)
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. TAIR)
Total hits: 5
Match NameE-valueIdentityDescription
AT3G46030.12.0e-5889.0Histone superfamily protein[more]
AT5G59910.12.0e-5886.7Histone superfamily protein[more]
AT3G45980.13.4e-5886.7Histone superfamily protein[more]
AT1G07790.13.7e-5785.4Histone superfamily protein[more]
AT2G28720.17.1e-5683.4Histone superfamily protein[more]
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InterPro
Analysis Name: InterPro Annotations of S. oleracea
Date Performed: 2018-06-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR000558Histone H2BPRINTSPR00621HISTONEH2Bcoord: 114..127
score: 5.5E-49coord: 75..95
score: 5.5E-49coord: 127..140
score: 5.5E-49coord: 97..114
score: 5.5E-49coord: 56..74
score: 5.5
IPR000558Histone H2BPANTHERPTHR23428HISTONE H2Bcoord: 14..143
score: 1.4E
IPR000558Histone H2BSMARTSM00427h2b3coord: 46..142
score: 2.7
IPR000558Histone H2BPROSITEPS00357HISTONE_H2Bcoord: 111..133
scor
IPR007125Histone H2A/H2B/H3PFAMPF00125Histonecoord: 6..119
score: 1.0
IPR009072Histone-foldGENE3D1.10.20.10coord: 22..143
score: 2.7
IPR009072Histone-foldunknownSSF47113Histone-foldcoord: 27..143
score: 4.84
NoneNo IPR availableunknownCoilCoilcoord: 85..105
scor

GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
cellular_component GO:0000786 nucleosome
cellular_component GO:0005634 nucleus
molecular_function GO:0003677 DNA binding
molecular_function GO:0046982 protein heterodimerization activity
RNA-Seq Expression