Spo00070 (gene) | SpinachBase

Overview


Name	Spo00070
Type	gene
Organism	Spinacia oleracea (Spinach)
Description	Histone H2B
Location	Super_scaffold_70 : 919394 .. 921658 (-)

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDSexon

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCACCAAAGGCGGAGAAGAAGCCTGCCGAAAAGAAGCCCGCGGAGGAGAAGAAGGCCGCCGCCGCCGAGAAAGCTCCGGCTGAGAAGAAGCCAAAGGCCGGCAAGAAGCTTCCTAAGGAAGCCGGAGCTGCCGCTGGAGACAAGAAGAAGAAGAGACACAAGAAGAGCGTCGAGACTTACAAGATCTACATCTTCAAGGTTCTCAAGCAAGTTCACCCTGACATCGGAATTTCTAGCAAGGCGATGAGCATCATGAACAGCTTCATCAACGACATCTTCGAGAAGCTCGCTCAGGAATCCGCCAGACTTGCCCGCTACAACAAGAAGCCTACCATCACTTCCCGGGAGATTCAGACTGCTGTCAGGCTTGTTCTTCCCGGTGAACTCGCTAAGCACGCTGTCTCTGAAGGAACCAAGGCGGTTACTAAATTTACCAGCTCTTAAATGTTTTGATTTCAATGTTTTTAGGGTTTGTAAACAGTTGGATATGGGGAAATTGAAAAGAAATTTGAAGGTATTGGTGGATTTTGGTTTGTAAAATTTACTCAAGCTTGGTTGTTTAGATTAGTAAATGTTAGGATTTTAGGGTAATGTTGATGTTTGTTGAAATTGCCGTTGTTCTGTTTGCAGTAATTGAAATGATCAGAATAATTTTCTTTATATGGATCCTATCTCTCCGTTTGAATTGATTTTAAATAGTTTCTGTCTTGAATTGGTCTTGAGTTCCATCATATTGGTAGTCTACTGCTGCATAACATATTAAACTCCGTAGATTATGAATTTGATCATGTTTTCAATCACTTGGTAAAAGCAAATCATGCTGCTATGAAGCATGATTTCTGCAGACTTTACTTGTGCTAGGCAGGGTGAGATACCTGGAGTATCCAGCTACTGCTAGGTGAAACACTACAACTAAGGCGGAGAATGTTGATCTAACACTACAACTAAGGCGGAGAATGTTGATCTATCAGAGTATCATGCACAAGCGCACAACTACTAATAGTGCATAAGTATGTCAAGAGGAGGTAAAACTAGGAGTTTACACTTTACTGGCATATACTCTATGTAAGCAATTGATAGAATGTGTGATGGATGCTTTTGTTCTTGATTATTTGGTTGCAGTTCTGGTTATTTCCCCGAGCCTTCTCCTTTTCCTTGTTGGTGAATGGTGATCTGGTTTACTTTTCTATTGCCCCTTCATGCTTATGTATTTTTCATATCTGATTTTCTTAGTATTCAGTAGTTCAGCCTAATATTTTTTGGAAGACAGGGTGTTTCATTCTTCTTAGGAATTGTTTCTAAATCTTATATGATGGCATGATGCAGTAAGTTGAGCTCCATCTAGTCTATGTATGAAGGTTTTCTGATTCCTTTTTTGACACATTTCTTTCTCCCATTTTGTAAATTTGTGCAGTTGAAGTGATAGTTCATTTTACATCTGTATTACTAAATCACATTAGAAGTTGATTGAGAATGGTGTAAATGGAGTATGTGATATCTAACTTTTATGTTTTGTAATATGTGGCTTTTGATAATTTTTTTTACCACAAAGTGTTCTAATACTGTGTTATACAAGTTCTTATACTACTCATTTGAAGTTCTATTATTAGTGAATGTGTTTGATTGCTCTTCTGATTATAATAAGATATAATATTCTTTTTAGGCCTTGTTATTTTTATTGAATGTTACTTGGGCAGCTTACATTGAATATCAAATTATGATGTTGATACTGTGTTCTTTGTTTCGTATTGCTCAAATTGTGACTTTGTCAAGTAAATGTAAAATACTATGCTTTTTTAATTAAGTTCTGGTCTGGTTTCGATTAAGTATGTACTTACTGTTTGTAAATATTATTTATTGGATGCTAATTTGTTGTTGATCTGTGATGCAGGTTAACATTCATTTATGATATGTCTATGATTCTATGAAGATTTAGCTGTGTCACTTGTGTTATATGCGGAAAAGGAATGATCAGAACATTTTAGTTGTCCTGTTTGGCTACTGCATTTCGTCTCAAGTTTTTTGTACTATGATCGGTCTTAAATTTATCTTCTCATTGACCTGATATTGCATAGCACGGAATATGGTACGCGTACTTCCATACCAGTATACTTCCTTATGCAGGCAGCAGGCTATAGCTATATAGCTGAACAACAGTTGCTCCGGGAAAGCAGTTTAGCACTTAGGGCCTTAGGGGTGGCTGGCTTGAGTGATTTTTCTTCCTACAGATTGTTTTCGTACGCAGCTAGCACTTTAGCGTAG

mRNA sequence

ATGGCACCAAAGGCGGAGAAGAAGCCTGCCGAAAAGAAGCCCGCGGAGGAGAAGAAGGCCGCCGCCGCCGAGAAAGCTCCGGCTGAGAAGAAGCCAAAGGCCGGCAAGAAGCTTCCTAAGGAAGCCGGAGCTGCCGCTGGAGACAAGAAGAAGAAGAGACACAAGAAGAGCGTCGAGACTTACAAGATCTACATCTTCAAGGTTCTCAAGCAAGTTCACCCTGACATCGGAATTTCTAGCAAGGCGATGAGCATCATGAACAGCTTCATCAACGACATCTTCGAGAAGCTCGCTCAGGAATCCGCCAGACTTGCCCGCTACAACAAGAAGCCTACCATCACTTCCCGGGAGATTCAGACTGCTGTCAGGCTTGTTCTTCCCGGTGAACTCGCTAAGCACGCTGTCTCTGAAGGAACCAAGGCGTTCTGGTTATTTCCCCGAGCCTTCTCCTTTTCCTTGTTGGTGAATGGTGATCTGGCAGCAGGCTATAGCTATATAGCTGAACAACAGTTGCTCCGGGAAAGCAGTTTAGCACTTAGGGCCTTAGGGGTGGCTGGCTTGAGTGATTTTTCTTCCTACAGATTGTTTTCGTACGCAGCTAGCACTTTAGCGTAG

Coding sequence (CDS)

ATGGCACCAAAGGCGGAGAAGAAGCCTGCCGAAAAGAAGCCCGCGGAGGAGAAGAAGGCCGCCGCCGCCGAGAAAGCTCCGGCTGAGAAGAAGCCAAAGGCCGGCAAGAAGCTTCCTAAGGAAGCCGGAGCTGCCGCTGGAGACAAGAAGAAGAAGAGACACAAGAAGAGCGTCGAGACTTACAAGATCTACATCTTCAAGGTTCTCAAGCAAGTTCACCCTGACATCGGAATTTCTAGCAAGGCGATGAGCATCATGAACAGCTTCATCAACGACATCTTCGAGAAGCTCGCTCAGGAATCCGCCAGACTTGCCCGCTACAACAAGAAGCCTACCATCACTTCCCGGGAGATTCAGACTGCTGTCAGGCTTGTTCTTCCCGGTGAACTCGCTAAGCACGCTGTCTCTGAAGGAACCAAGGCGTTCTGGTTATTTCCCCGAGCCTTCTCCTTTTCCTTGTTGGTGAATGGTGATCTGGCAGCAGGCTATAGCTATATAGCTGAACAACAGTTGCTCCGGGAAAGCAGTTTAGCACTTAGGGCCTTAGGGGTGGCTGGCTTGAGTGATTTTTCTTCCTACAGATTGTTTTCGTACGCAGCTAGCACTTTAGCGTAG

Protein sequence

MAPKAEKKPAEKKPAEEKKAAAAEKAPAEKKPKAGKKLPKEAGAAAGDKKKKRHKKSVETYKIYIFKVLKQVHPDIGISSKAMSIMNSFINDIFEKLAQESARLARYNKKPTITSREIQTAVRLVLPGELAKHAVSEGTKAFWLFPRAFSFSLLVNGDLAAGYSYIAEQQLLRESSLALRALGVAGLSDFSSYRLFSYAASTLA

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Spo00070.1	Spo00070.1	mRNA

Homology

[Close]

BLAST of Spo00070.1 vs. NCBI nr
Match: gi|902185838|gb|KNA10559.1| (hypothetical protein SOVF_143230 [Spinacia oleracea])

HSP 1 Score: 251.1 bits (640), Expect = 1.600e-63
Identity = 142/145 (97.93%), Postives = 142/145 (97.93%), Query Frame = 1

		  
Query: 1   MAPKAEKKPAEKKPAEEKKAAAAEKAPAEKKPKAGKKLPKEAGAAAGDKKKKRHKKSVET 60
           MAPKAEKKPAEKKPAEEKKAAAAEKAPAEKKPKAGKKLPKEAGAAAGDKKKKRHKKSVET
Sbjct: 1   MAPKAEKKPAEKKPAEEKKAAAAEKAPAEKKPKAGKKLPKEAGAAAGDKKKKRHKKSVET 60

Query: 61  YKIYIFKVLKQVHPDIGISSKAMSIMNSFINDIFEKLAQESARLARYNKKPTITSREIQT 120
           YKIYIFKVLKQVHPDIGISSKAMSIMNSFINDIFEKLAQESARLARYNKKPTITSREIQT
Sbjct: 61  YKIYIFKVLKQVHPDIGISSKAMSIMNSFINDIFEKLAQESARLARYNKKPTITSREIQT 120

Query: 121 AVRLVLPGELAKHAVSEGTKAFWLF 146
           AVRLVLPGELAKHAVSEGTKA   F
Sbjct: 121 AVRLVLPGELAKHAVSEGTKAVTKF 145

[Close]

BLAST of Spo00070.1 vs. NCBI nr
Match: gi|902184879|gb|KNA10386.1| (hypothetical protein SOVF_144860 [Spinacia oleracea])

HSP 1 Score: 249.6 bits (636), Expect = 4.700e-63
Identity = 141/145 (97.24%), Postives = 141/145 (97.24%), Query Frame = 1

		  
Query: 1   MAPKAEKKPAEKKPAEEKKAAAAEKAPAEKKPKAGKKLPKEAGAAAGDKKKKRHKKSVET 60
           MAPKAEKKPAEKKP EEKKAAAAEKAPAEKKPKAGKKLPKEAGAAAGDKKKKRHKKSVET
Sbjct: 1   MAPKAEKKPAEKKPVEEKKAAAAEKAPAEKKPKAGKKLPKEAGAAAGDKKKKRHKKSVET 60

Query: 61  YKIYIFKVLKQVHPDIGISSKAMSIMNSFINDIFEKLAQESARLARYNKKPTITSREIQT 120
           YKIYIFKVLKQVHPDIGISSKAMSIMNSFINDIFEKLAQESARLARYNKKPTITSREIQT
Sbjct: 61  YKIYIFKVLKQVHPDIGISSKAMSIMNSFINDIFEKLAQESARLARYNKKPTITSREIQT 120

Query: 121 AVRLVLPGELAKHAVSEGTKAFWLF 146
           AVRLVLPGELAKHAVSEGTKA   F
Sbjct: 121 AVRLVLPGELAKHAVSEGTKAVTKF 145

[Close]

BLAST of Spo00070.1 vs. NCBI nr
Match: gi|902233045|gb|KNA22906.1| (hypothetical protein SOVF_029910 [Spinacia oleracea])

HSP 1 Score: 247.7 bits (631), Expect = 1.800e-62
Identity = 140/145 (96.55%), Postives = 140/145 (96.55%), Query Frame = 1

		  
Query: 1   MAPKAEKKPAEKKPAEEKKAAAAEKAPAEKKPKAGKKLPKEAGAAAGDKKKKRHKKSVET 60
           M PK EKKPAEKKPAEEKKAAAAEKAPAEKKPKAGKKLPKEAGAAAGDKKKKRHKKSVET
Sbjct: 1   MPPKGEKKPAEKKPAEEKKAAAAEKAPAEKKPKAGKKLPKEAGAAAGDKKKKRHKKSVET 60

Query: 61  YKIYIFKVLKQVHPDIGISSKAMSIMNSFINDIFEKLAQESARLARYNKKPTITSREIQT 120
           YKIYIFKVLKQVHPDIGISSKAMSIMNSFINDIFEKLAQESARLARYNKKPTITSREIQT
Sbjct: 61  YKIYIFKVLKQVHPDIGISSKAMSIMNSFINDIFEKLAQESARLARYNKKPTITSREIQT 120

Query: 121 AVRLVLPGELAKHAVSEGTKAFWLF 146
           AVRLVLPGELAKHAVSEGTKA   F
Sbjct: 121 AVRLVLPGELAKHAVSEGTKAVTKF 145

[Close]

BLAST of Spo00070.1 vs. NCBI nr
Match: gi|657986068|ref|XP_008385152.1| (PREDICTED: probable histone H2B.1 [Malus domestica])

HSP 1 Score: 242.3 bits (617), Expect = 7.500e-61
Identity = 137/145 (94.48%), Postives = 139/145 (95.86%), Query Frame = 1

		  
Query: 1   MAPKAEKKPAEKKPAEEKKAAAAEKAPAEKKPKAGKKLPKEAGAAAGDKKKKRHKKSVET 60
           MAPKAEKKPAEKKPAEEKK+A AEKAPAEKKPKAGKKLPKEAGAAAGDKKKKR KKSVET
Sbjct: 1   MAPKAEKKPAEKKPAEEKKSAVAEKAPAEKKPKAGKKLPKEAGAAAGDKKKKRSKKSVET 60

Query: 61  YKIYIFKVLKQVHPDIGISSKAMSIMNSFINDIFEKLAQESARLARYNKKPTITSREIQT 120
           YKIYIFKVLKQVHPDIGISSKAM IMNSFINDIFEKLAQES+RLARYNKKPTITSREIQT
Sbjct: 61  YKIYIFKVLKQVHPDIGISSKAMGIMNSFINDIFEKLAQESSRLARYNKKPTITSREIQT 120

Query: 121 AVRLVLPGELAKHAVSEGTKAFWLF 146
           AVRLVLPGELAKHAVSEGTKA   F
Sbjct: 121 AVRLVLPGELAKHAVSEGTKAVTKF 145

[Close]

BLAST of Spo00070.1 vs. NCBI nr
Match: gi|731349098|ref|XP_010685822.1| (PREDICTED: histone H2B isoform X2 [Beta vulgaris subsp. vulgaris])

HSP 1 Score: 241.1 bits (614), Expect = 1.700e-60
Identity = 140/146 (95.89%), Postives = 141/146 (96.58%), Query Frame = 1

		  
Query: 1   MAPKAEKKPAEKKPAEEKKAAAAEKAPAEKKPKAGKKLPKEAGAAA-GDKKKKRHKKSVE 60
           MAPKAEKKPAEKKPAEEKKAAAAEKAPAEKKPKAGKKLPKEAGAAA G+KKKKR KKSVE
Sbjct: 1   MAPKAEKKPAEKKPAEEKKAAAAEKAPAEKKPKAGKKLPKEAGAAAAGEKKKKRTKKSVE 60

Query: 61  TYKIYIFKVLKQVHPDIGISSKAMSIMNSFINDIFEKLAQESARLARYNKKPTITSREIQ 120
           TYKIYIFKVLKQVHPDIGISSKAMSIMNSFINDIFEKLAQESARLARYNKKPTITSREIQ
Sbjct: 61  TYKIYIFKVLKQVHPDIGISSKAMSIMNSFINDIFEKLAQESARLARYNKKPTITSREIQ 120

Query: 121 TAVRLVLPGELAKHAVSEGTKAFWLF 146
           TAVRLVLPGELAKHAVSEGTKA   F
Sbjct: 121 TAVRLVLPGELAKHAVSEGTKAVTKF 146

[Close]

BLAST of Spo00070.1 vs. UniProtKB/TrEMBL
Match: A0A0K9QTH0_SPIOL (Histone H2B OS=Spinacia oleracea GN=SOVF_143230 PE=3 SV=1)

HSP 1 Score: 251.1 bits (640), Expect = 1.100e-63
Identity = 142/145 (97.93%), Postives = 142/145 (97.93%), Query Frame = 1

		  
Query: 1   MAPKAEKKPAEKKPAEEKKAAAAEKAPAEKKPKAGKKLPKEAGAAAGDKKKKRHKKSVET 60
           MAPKAEKKPAEKKPAEEKKAAAAEKAPAEKKPKAGKKLPKEAGAAAGDKKKKRHKKSVET
Sbjct: 1   MAPKAEKKPAEKKPAEEKKAAAAEKAPAEKKPKAGKKLPKEAGAAAGDKKKKRHKKSVET 60

Query: 61  YKIYIFKVLKQVHPDIGISSKAMSIMNSFINDIFEKLAQESARLARYNKKPTITSREIQT 120
           YKIYIFKVLKQVHPDIGISSKAMSIMNSFINDIFEKLAQESARLARYNKKPTITSREIQT
Sbjct: 61  YKIYIFKVLKQVHPDIGISSKAMSIMNSFINDIFEKLAQESARLARYNKKPTITSREIQT 120

Query: 121 AVRLVLPGELAKHAVSEGTKAFWLF 146
           AVRLVLPGELAKHAVSEGTKA   F
Sbjct: 121 AVRLVLPGELAKHAVSEGTKAVTKF 145

[Close]

BLAST of Spo00070.1 vs. UniProtKB/TrEMBL
Match: A0A0K9QV24_SPIOL (Histone H2B OS=Spinacia oleracea GN=SOVF_037580 PE=3 SV=1)

HSP 1 Score: 249.6 bits (636), Expect = 3.300e-63
Identity = 141/145 (97.24%), Postives = 141/145 (97.24%), Query Frame = 1

		  
Query: 1   MAPKAEKKPAEKKPAEEKKAAAAEKAPAEKKPKAGKKLPKEAGAAAGDKKKKRHKKSVET 60
           MAPKAEKKPAEKKP EEKKAAAAEKAPAEKKPKAGKKLPKEAGAAAGDKKKKRHKKSVET
Sbjct: 1   MAPKAEKKPAEKKPVEEKKAAAAEKAPAEKKPKAGKKLPKEAGAAAGDKKKKRHKKSVET 60

Query: 61  YKIYIFKVLKQVHPDIGISSKAMSIMNSFINDIFEKLAQESARLARYNKKPTITSREIQT 120
           YKIYIFKVLKQVHPDIGISSKAMSIMNSFINDIFEKLAQESARLARYNKKPTITSREIQT
Sbjct: 61  YKIYIFKVLKQVHPDIGISSKAMSIMNSFINDIFEKLAQESARLARYNKKPTITSREIQT 120

Query: 121 AVRLVLPGELAKHAVSEGTKAFWLF 146
           AVRLVLPGELAKHAVSEGTKA   F
Sbjct: 121 AVRLVLPGELAKHAVSEGTKAVTKF 145

[Close]

BLAST of Spo00070.1 vs. UniProtKB/TrEMBL
Match: A0A0K9RTN1_SPIOL (Histone H2B OS=Spinacia oleracea GN=SOVF_029910 PE=3 SV=1)

HSP 1 Score: 247.7 bits (631), Expect = 1.200e-62
Identity = 140/145 (96.55%), Postives = 140/145 (96.55%), Query Frame = 1

		  
Query: 1   MAPKAEKKPAEKKPAEEKKAAAAEKAPAEKKPKAGKKLPKEAGAAAGDKKKKRHKKSVET 60
           M PK EKKPAEKKPAEEKKAAAAEKAPAEKKPKAGKKLPKEAGAAAGDKKKKRHKKSVET
Sbjct: 1   MPPKGEKKPAEKKPAEEKKAAAAEKAPAEKKPKAGKKLPKEAGAAAGDKKKKRHKKSVET 60

Query: 61  YKIYIFKVLKQVHPDIGISSKAMSIMNSFINDIFEKLAQESARLARYNKKPTITSREIQT 120
           YKIYIFKVLKQVHPDIGISSKAMSIMNSFINDIFEKLAQESARLARYNKKPTITSREIQT
Sbjct: 61  YKIYIFKVLKQVHPDIGISSKAMSIMNSFINDIFEKLAQESARLARYNKKPTITSREIQT 120

Query: 121 AVRLVLPGELAKHAVSEGTKAFWLF 146
           AVRLVLPGELAKHAVSEGTKA   F
Sbjct: 121 AVRLVLPGELAKHAVSEGTKAVTKF 145

[Close]

BLAST of Spo00070.1 vs. UniProtKB/TrEMBL
Match: A0A0J8BUQ7_BETVU (Histone H2B OS=Beta vulgaris subsp. vulgaris GN=BVRB_7g174410 PE=3 SV=1)

HSP 1 Score: 241.1 bits (614), Expect = 1.200e-60
Identity = 140/146 (95.89%), Postives = 141/146 (96.58%), Query Frame = 1

		  
Query: 1   MAPKAEKKPAEKKPAEEKKAAAAEKAPAEKKPKAGKKLPKEAGAAA-GDKKKKRHKKSVE 60
           MAPKAEKKPAEKKPAEEKKAAAAEKAPAEKKPKAGKKLPKEAGAAA G+KKKKR KKSVE
Sbjct: 1   MAPKAEKKPAEKKPAEEKKAAAAEKAPAEKKPKAGKKLPKEAGAAAAGEKKKKRTKKSVE 60

Query: 61  TYKIYIFKVLKQVHPDIGISSKAMSIMNSFINDIFEKLAQESARLARYNKKPTITSREIQ 120
           TYKIYIFKVLKQVHPDIGISSKAMSIMNSFINDIFEKLAQESARLARYNKKPTITSREIQ
Sbjct: 61  TYKIYIFKVLKQVHPDIGISSKAMSIMNSFINDIFEKLAQESARLARYNKKPTITSREIQ 120

Query: 121 TAVRLVLPGELAKHAVSEGTKAFWLF 146
           TAVRLVLPGELAKHAVSEGTKA   F
Sbjct: 121 TAVRLVLPGELAKHAVSEGTKAVTKF 146

[Close]

BLAST of Spo00070.1 vs. UniProtKB/TrEMBL
Match: M5WKF6_PRUPE (Histone H2B OS=Prunus persica GN=PRUPE_ppa012932mg PE=3 SV=1)

HSP 1 Score: 240.7 bits (613), Expect = 1.500e-60
Identity = 136/145 (93.79%), Postives = 138/145 (95.17%), Query Frame = 1

		  
Query: 1   MAPKAEKKPAEKKPAEEKKAAAAEKAPAEKKPKAGKKLPKEAGAAAGDKKKKRHKKSVET 60
           MAPKAEKKPAEKKPAEEKK+  AEKAPAEKKPKAGKKLPKEAGAAAGDKKKKR KKSVET
Sbjct: 1   MAPKAEKKPAEKKPAEEKKSTVAEKAPAEKKPKAGKKLPKEAGAAAGDKKKKRSKKSVET 60

Query: 61  YKIYIFKVLKQVHPDIGISSKAMSIMNSFINDIFEKLAQESARLARYNKKPTITSREIQT 120
           YKIYIFKVLKQVHPDIGISSKAM IMNSFINDIFEKLAQES+RLARYNKKPTITSREIQT
Sbjct: 61  YKIYIFKVLKQVHPDIGISSKAMGIMNSFINDIFEKLAQESSRLARYNKKPTITSREIQT 120

Query: 121 AVRLVLPGELAKHAVSEGTKAFWLF 146
           AVRLVLPGELAKHAVSEGTKA   F
Sbjct: 121 AVRLVLPGELAKHAVSEGTKAVTKF 145

[Close]

BLAST of Spo00070.1 vs. ExPASy Swiss-Prot
Match: H2B1_MEDTR (Probable histone H2B.1 OS=Medicago truncatula PE=3 SV=3)

HSP 1 Score: 235.0 bits (598), Expect = 7.500e-61
Identity = 132/145 (91.03%), Postives = 136/145 (93.79%), Query Frame = 1

		  
Query: 1   MAPKAEKKPAEKKPAEEKKAAAAEKAPAEKKPKAGKKLPKEAGAAAGDKKKKRHKKSVET 60
           MAPK EKKPAEKKPAEEKK+  AEKAPAEKKPKAGKKLPKE G+AAG+KKKKR KKSVET
Sbjct: 1   MAPKGEKKPAEKKPAEEKKSTVAEKAPAEKKPKAGKKLPKEGGSAAGEKKKKRSKKSVET 60

Query: 61  YKIYIFKVLKQVHPDIGISSKAMSIMNSFINDIFEKLAQESARLARYNKKPTITSREIQT 120
           YKIYIFKVLKQVHPDIGISSKAM IMNSFINDIFEKLAQES+RLARYNKKPTITSREIQT
Sbjct: 61  YKIYIFKVLKQVHPDIGISSKAMGIMNSFINDIFEKLAQESSRLARYNKKPTITSREIQT 120

Query: 121 AVRLVLPGELAKHAVSEGTKAFWLF 146
           AVRLVLPGELAKHAVSEGTKA   F
Sbjct: 121 AVRLVLPGELAKHAVSEGTKAVTKF 145

[Close]

BLAST of Spo00070.1 vs. ExPASy Swiss-Prot
Match: H2B_GOSHI (Histone H2B OS=Gossypium hirsutum GN=HIS2B PE=2 SV=3)

HSP 1 Score: 234.2 bits (596), Expect = 1.300e-60
Identity = 135/145 (93.10%), Postives = 137/145 (94.48%), Query Frame = 1

		  
Query: 1   MAPKAEKKPAEKKPAEEKKAAAAEKAPAEKKPKAGKKLPKEAGAAAGDKKKKRHKKSVET 60
           MAPKAEKKPAEKKPAEEKKA  AEKAPAEKKPKAGKKLPKE GAAAGDKKKKR KKSVET
Sbjct: 1   MAPKAEKKPAEKKPAEEKKAV-AEKAPAEKKPKAGKKLPKEGGAAAGDKKKKRVKKSVET 60

Query: 61  YKIYIFKVLKQVHPDIGISSKAMSIMNSFINDIFEKLAQESARLARYNKKPTITSREIQT 120
           YKIYIFKVLKQVHPDIGISSKAM IMNSFINDIFEKLAQE++RLARYNKKPTITSREIQT
Sbjct: 61  YKIYIFKVLKQVHPDIGISSKAMGIMNSFINDIFEKLAQEASRLARYNKKPTITSREIQT 120

Query: 121 AVRLVLPGELAKHAVSEGTKAFWLF 146
           AVRLVLPGELAKHAVSEGTKA   F
Sbjct: 121 AVRLVLPGELAKHAVSEGTKAVTKF 144

[Close]

BLAST of Spo00070.1 vs. ExPASy Swiss-Prot
Match: H2B2_MEDTR (Probable histone H2B.2 OS=Medicago truncatula PE=3 SV=3)

HSP 1 Score: 231.1 bits (588), Expect = 1.100e-59
Identity = 130/145 (89.66%), Postives = 134/145 (92.41%), Query Frame = 1

		  
Query: 1   MAPKAEKKPAEKKPAEEKKAAAAEKAPAEKKPKAGKKLPKEAGAAAGDKKKKRHKKSVET 60
           MAPK EKKPAEKKPAEEKK+  AEKAPAEKKPKAGKKLPKE G+AAG+KKKKR KKSVET
Sbjct: 1   MAPKGEKKPAEKKPAEEKKSTVAEKAPAEKKPKAGKKLPKEGGSAAGEKKKKRSKKSVET 60

Query: 61  YKIYIFKVLKQVHPDIGISSKAMSIMNSFINDIFEKLAQESARLARYNKKPTITSREIQT 120
           YKIYIFKVLKQVHPDIGISSKAM IMNSFINDIFEKL QES+RLARYNKKPTITSREIQT
Sbjct: 61  YKIYIFKVLKQVHPDIGISSKAMGIMNSFINDIFEKLTQESSRLARYNKKPTITSREIQT 120

Query: 121 AVRLVLPGELAKHAVSEGTKAFWLF 146
           AVRLVLPGELAKH VSEGTKA   F
Sbjct: 121 AVRLVLPGELAKHDVSEGTKAVTKF 145

[Close]

BLAST of Spo00070.1 vs. ExPASy Swiss-Prot
Match: H2B7_ARATH (Histone H2B.7 OS=Arabidopsis thaliana GN=At3g46030 PE=1 SV=3)

HSP 1 Score: 219.9 bits (559), Expect = 2.500e-56
Identity = 129/145 (88.97%), Postives = 132/145 (91.03%), Query Frame = 1

		  
Query: 1   MAPKAEKKPAEKKPAEEKKAAAAEKAPAEKKPKAGKKLPKEAGAAAGDKKKKRHKKSVET 60
           MAPKAEKKPAEKKP EEK  + AEKAPAEKKPKAGKKLPKEAGA  GDKKKK  KKSVET
Sbjct: 1   MAPKAEKKPAEKKPVEEK--SKAEKAPAEKKPKAGKKLPKEAGAG-GDKKKKMKKKSVET 60

Query: 61  YKIYIFKVLKQVHPDIGISSKAMSIMNSFINDIFEKLAQESARLARYNKKPTITSREIQT 120
           YKIYIFKVLKQVHPDIGISSKAM IMNSFINDIFEKLA ES++LARYNKKPTITSREIQT
Sbjct: 61  YKIYIFKVLKQVHPDIGISSKAMGIMNSFINDIFEKLASESSKLARYNKKPTITSREIQT 120

Query: 121 AVRLVLPGELAKHAVSEGTKAFWLF 146
           AVRLVLPGELAKHAVSEGTKA   F
Sbjct: 121 AVRLVLPGELAKHAVSEGTKAVTKF 142

[Close]

BLAST of Spo00070.1 vs. ExPASy Swiss-Prot
Match: H2B11_ARATH (Histone H2B.11 OS=Arabidopsis thaliana GN=At5g59910 PE=1 SV=5)

HSP 1 Score: 219.2 bits (557), Expect = 4.300e-56
Identity = 129/148 (87.16%), Postives = 134/148 (90.54%), Query Frame = 1

		  
Query: 1   MAPKAEKKPAEKKPAEEK---KAAAAEKAPAEKKPKAGKKLPKEAGAAAGDKKKKRHKKS 60
           MAPKAEKKPAEKKPA EK   + + AEKAPAEKKPKAGKKLPKEAGA  GDKKKK  KKS
Sbjct: 1   MAPKAEKKPAEKKPASEKPVEEKSKAEKAPAEKKPKAGKKLPKEAGAG-GDKKKKMKKKS 60

Query: 61  VETYKIYIFKVLKQVHPDIGISSKAMSIMNSFINDIFEKLAQESARLARYNKKPTITSRE 120
           VETYKIYIFKVLKQVHPDIGISSKAM IMNSFINDIFEKLAQE+++LARYNKKPTITSRE
Sbjct: 61  VETYKIYIFKVLKQVHPDIGISSKAMGIMNSFINDIFEKLAQEASKLARYNKKPTITSRE 120

Query: 121 IQTAVRLVLPGELAKHAVSEGTKAFWLF 146
           IQTAVRLVLPGELAKHAVSEGTKA   F
Sbjct: 121 IQTAVRLVLPGELAKHAVSEGTKAVTKF 147

[Close]

BLAST of Spo00070.1 vs. TAIR (Arabidopsis)
Match: AT3G46030.1 (Histone superfamily protein)

HSP 1 Score: 219.9 bits (559), Expect = 1.400e-57
Identity = 129/145 (88.97%), Postives = 132/145 (91.03%), Query Frame = 1

		  
Query: 1   MAPKAEKKPAEKKPAEEKKAAAAEKAPAEKKPKAGKKLPKEAGAAAGDKKKKRHKKSVET 60
           MAPKAEKKPAEKKP EEK  + AEKAPAEKKPKAGKKLPKEAGA  GDKKKK  KKSVET
Sbjct: 1   MAPKAEKKPAEKKPVEEK--SKAEKAPAEKKPKAGKKLPKEAGAG-GDKKKKMKKKSVET 60

Query: 61  YKIYIFKVLKQVHPDIGISSKAMSIMNSFINDIFEKLAQESARLARYNKKPTITSREIQT 120
           YKIYIFKVLKQVHPDIGISSKAM IMNSFINDIFEKLA ES++LARYNKKPTITSREIQT
Sbjct: 61  YKIYIFKVLKQVHPDIGISSKAMGIMNSFINDIFEKLASESSKLARYNKKPTITSREIQT 120

Query: 121 AVRLVLPGELAKHAVSEGTKAFWLF 146
           AVRLVLPGELAKHAVSEGTKA   F
Sbjct: 121 AVRLVLPGELAKHAVSEGTKAVTKF 142

[Close]

BLAST of Spo00070.1 vs. TAIR (Arabidopsis)
Match: AT5G59910.1 (Histone superfamily protein)

HSP 1 Score: 219.2 bits (557), Expect = 2.400e-57
Identity = 129/148 (87.16%), Postives = 134/148 (90.54%), Query Frame = 1

		  
Query: 1   MAPKAEKKPAEKKPAEEK---KAAAAEKAPAEKKPKAGKKLPKEAGAAAGDKKKKRHKKS 60
           MAPKAEKKPAEKKPA EK   + + AEKAPAEKKPKAGKKLPKEAGA  GDKKKK  KKS
Sbjct: 1   MAPKAEKKPAEKKPASEKPVEEKSKAEKAPAEKKPKAGKKLPKEAGAG-GDKKKKMKKKS 60

Query: 61  VETYKIYIFKVLKQVHPDIGISSKAMSIMNSFINDIFEKLAQESARLARYNKKPTITSRE 120
           VETYKIYIFKVLKQVHPDIGISSKAM IMNSFINDIFEKLAQE+++LARYNKKPTITSRE
Sbjct: 61  VETYKIYIFKVLKQVHPDIGISSKAMGIMNSFINDIFEKLAQEASKLARYNKKPTITSRE 120

Query: 121 IQTAVRLVLPGELAKHAVSEGTKAFWLF 146
           IQTAVRLVLPGELAKHAVSEGTKA   F
Sbjct: 121 IQTAVRLVLPGELAKHAVSEGTKAVTKF 147

[Close]

BLAST of Spo00070.1 vs. TAIR (Arabidopsis)
Match: AT3G45980.1 (Histone superfamily protein)

HSP 1 Score: 216.9 bits (551), Expect = 1.200e-56
Identity = 128/148 (86.49%), Postives = 133/148 (89.86%), Query Frame = 1

		  
Query: 1   MAPKAEKKPAEKKPAEEK---KAAAAEKAPAEKKPKAGKKLPKEAGAAAGDKKKKRHKKS 60
           MAP+AEKKPAEKKPA EK   + + AEKAPAEKKPKAGKKLPKEAGA  GDKKKK  KKS
Sbjct: 1   MAPRAEKKPAEKKPAAEKPVEEKSKAEKAPAEKKPKAGKKLPKEAGAG-GDKKKKMKKKS 60

Query: 61  VETYKIYIFKVLKQVHPDIGISSKAMSIMNSFINDIFEKLAQESARLARYNKKPTITSRE 120
           VETYKIYIFKVLKQVHPDIGISSKAM IMNSFINDIFEKLA ES++LARYNKKPTITSRE
Sbjct: 61  VETYKIYIFKVLKQVHPDIGISSKAMGIMNSFINDIFEKLASESSKLARYNKKPTITSRE 120

Query: 121 IQTAVRLVLPGELAKHAVSEGTKAFWLF 146
           IQTAVRLVLPGELAKHAVSEGTKA   F
Sbjct: 121 IQTAVRLVLPGELAKHAVSEGTKAVTKF 147

[Close]

BLAST of Spo00070.1 vs. TAIR (Arabidopsis)
Match: AT2G28720.1 (Histone superfamily protein)

HSP 1 Score: 209.5 bits (532), Expect = 1.900e-54
Identity = 124/148 (83.78%), Postives = 129/148 (87.16%), Query Frame = 1

		  
Query: 1   MAPKAEKKPAEKKPAEEKKAA---AAEKAPAEKKPKAGKKLPKEAGAAAGDKKKKRHKKS 60
           MAPKA KKPAEKKPAE+  A     AEKAPAEKKPKAGKKLPKEA     +KKKKR KKS
Sbjct: 1   MAPKAGKKPAEKKPAEKAPAEEEKVAEKAPAEKKPKAGKKLPKEAVTGGVEKKKKRVKKS 60

Query: 61  VETYKIYIFKVLKQVHPDIGISSKAMSIMNSFINDIFEKLAQESARLARYNKKPTITSRE 120
            ETYKIYIFKVLKQVHPDIGISSKAM IMNSFINDIFEKLAQE+++LARYNKKPTITSRE
Sbjct: 61  TETYKIYIFKVLKQVHPDIGISSKAMGIMNSFINDIFEKLAQEASKLARYNKKPTITSRE 120

Query: 121 IQTAVRLVLPGELAKHAVSEGTKAFWLF 146
           IQTAVRLVLPGELAKHAVSEGTKA   F
Sbjct: 121 IQTAVRLVLPGELAKHAVSEGTKAVTKF 148

[Close]

BLAST of Spo00070.1 vs. TAIR (Arabidopsis)
Match: AT1G07790.1 (Histone superfamily protein)

HSP 1 Score: 207.6 bits (527), Expect = 7.200e-54
Identity = 124/148 (83.78%), Postives = 131/148 (88.51%), Query Frame = 1

		  
Query: 1   MAPKAEKKPAEKKPAEEK---KAAAAEKAPAEKKPKAGKKLPKEAGAAAGDKKKKRHKKS 60
           MAP+AEKKPAEKK A E+   +  AAEKAPAEKKPKAGKKLP +    AGDKKKKR KK+
Sbjct: 1   MAPRAEKKPAEKKTAAERPVEENKAAEKAPAEKKPKAGKKLPPK---EAGDKKKKRSKKN 60

Query: 61  VETYKIYIFKVLKQVHPDIGISSKAMSIMNSFINDIFEKLAQESARLARYNKKPTITSRE 120
           VETYKIYIFKVLKQVHPDIGISSKAM IMNSFINDIFEKLAQES++LARYNKKPTITSRE
Sbjct: 61  VETYKIYIFKVLKQVHPDIGISSKAMGIMNSFINDIFEKLAQESSKLARYNKKPTITSRE 120

Query: 121 IQTAVRLVLPGELAKHAVSEGTKAFWLF 146
           IQTAVRLVLPGELAKHAVSEGTKA   F
Sbjct: 121 IQTAVRLVLPGELAKHAVSEGTKAVTKF 145

The following BLAST results are available for this feature:

BLAST of Spo00070.1 vs. NCBI nr
BLAST of Spo00070.1 vs. UniProtKB/TrEMBL
BLAST of Spo00070.1 vs. ExPASy Swiss-Prot
BLAST of Spo00070.1 vs. TAIR (Arabidopsis)

BLAST of Spo00070.1 vs. NCBI nr
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. NCBI nr)
Total hits: 5

Position :

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Match Name	E-value	Identity	Description
gi\|902185838\|gb\|KNA10559.1\|	1.6e-63	97.9	hypothetical protein SOVF_1432...	[more]
gi\|902184879\|gb\|KNA10386.1\|	4.7e-63	97.2	hypothetical protein SOVF_1448...	[more]
gi\|902233045\|gb\|KNA22906.1\|	1.8e-62	96.5	hypothetical protein SOVF_0299...	[more]
gi\|657986068\|ref\|XP_008385152.1\|	7.5e-61	94.4	PREDICTED: probable histone H2...	[more]
gi\|731349098\|ref\|XP_010685822.1\|	1.7e-60	95.8	PREDICTED: histone H2B isoform...	[more]

BLAST of Spo00070.1 vs. UniProtKB/TrEMBL
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. UniprotKB/TrEMBL)
Total hits: 5

Position :

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Match Name	E-value	Identity	Description
A0A0K9QTH0_SPIOL	1.1e-63	97.9	Histone H2B OS=Spinacia olerac...	[more]
A0A0K9QV24_SPIOL	3.3e-63	97.2	Histone H2B OS=Spinacia olerac...	[more]
A0A0K9RTN1_SPIOL	1.2e-62	96.5	Histone H2B OS=Spinacia olerac...	[more]
A0A0J8BUQ7_BETVU	1.2e-60	95.8	Histone H2B OS=Beta vulgaris s...	[more]
M5WKF6_PRUPE	1.5e-60	93.7	Histone H2B OS=Prunus persica ...	[more]

BLAST of Spo00070.1 vs. ExPASy Swiss-Prot
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. ExPASy SwissProt)
Total hits: 5

Position :

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Match Name	E-value	Identity	Description
H2B1_MEDTR	7.5e-61	91.0	Probable histone H2B.1 OS=Medi...	[more]
H2B_GOSHI	1.3e-60	93.1	Histone H2B OS=Gossypium hirsu...	[more]
H2B2_MEDTR	1.1e-59	89.6	Probable histone H2B.2 OS=Medi...	[more]
H2B7_ARATH	2.5e-56	88.9	Histone H2B.7 OS=Arabidopsis t...	[more]
H2B11_ARATH	4.3e-56	87.1	Histone H2B.11 OS=Arabidopsis ...	[more]

BLAST of Spo00070.1 vs. TAIR (Arabidopsis)
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. TAIR)
Total hits: 5

Position :

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Match Name	E-value	Identity	Description
AT3G46030.1	1.4e-57	88.9	Histone superfamily protein	[more]
AT5G59910.1	2.4e-57	87.1	Histone superfamily protein	[more]
AT3G45980.1	1.2e-56	86.4	Histone superfamily protein	[more]
AT2G28720.1	1.9e-54	83.7	Histone superfamily protein	[more]
AT1G07790.1	7.2e-54	83.7	Histone superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of S. oleracea
Date Performed: 2018-06-29

Position :

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IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR000558	Histone H2B	PRINTS	PR00621	HISTONEH2B	coord: 119..132 score: 1.4E-45coord: 80..100 score: 1.4E-45coord: 132..145 score: 1.4E-45coord: 61..79 score: 1.4E-45coord: 102..119 score: 1.4
IPR000558	Histone H2B	PANTHER	PTHR23428	HISTONE H2B	coord: 19..141 score: 5.5E
IPR000558	Histone H2B	SMART	SM00427	h2b3	coord: 51..147 score: 3.5
IPR000558	Histone H2B	PROSITE	PS00357	HISTONE_H2B	coord: 116..138 scor
IPR007125	Histone H2A/H2B/H3	PFAM	PF00125	Histone	coord: 4..124 score: 1.2
IPR009072	Histone-fold	GENE3D	1.10.20.10		coord: 27..143 score: 9.8
IPR009072	Histone-fold	unknown	SSF47113	Histone-fold	coord: 32..145 score: 1.45
None	No IPR available	unknown	Coil	Coil	coord: 90..110 scor

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0000786	nucleosome
cellular_component	GO:0005634	nucleus
molecular_function	GO:0003677	DNA binding
molecular_function	GO:0046982	protein heterodimerization activity

RNA-Seq Expression

Co-expression


Gene	r value	Expression
Spo00076	0.68	Barchart \| Table
Spo13367	0.65	Barchart \| Table