Spo22253.1 (mRNA) | SpinachBase

Overview


Name	Spo22253.1
Type	mRNA
Organism	Spinacia oleracea (Spinach)
Description	Translocon at inner membrane of chloroplasts 21
Location	SpoScf_02401 : 10398 .. 14992 (+)
Sequence length	1360

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

AGCTTACCTTCACTGATTTCACAACGAAAGCAAGCATATTTTAAAAAGATATTTTCCCTTTTTTTGGTTCCCTTTCCAATCTCTCATATTTTAGTTATGCAGACGCTACTCTTACCGGCGGCTCGCCCCGGCGTTCTGCCGCCGTCACCGGTGGTAACAACAGCCGCGCATTTACACCTTTCGAGGCGAATACCTATTTCCAGTCGCTTTCTTTCTCCTCCTCCGTCGTCGTCTTCTTTATCTTCCTACCTTCCTTCTCTCTCTTCGACACAATCGAGAACAATGGCGCACTGGCTTCCTCTAATGGCGTCTTCTCCTGCTTCCACGGGTTACGGTTCACCGGTTGATGAGTCCGACCAGGTTAAACTTACTCAGGTGAGTTAGCTCACTGTAATTCAACTCTTTATGGGTCGTATTTCATGAATTTCTCGTGATTAATTCTAGGTTTTGCTTCTATTGTAAAATGCTGATGAATTTCTCCAATTTATAGTCCGAGTGCAATTGGTAACTGCAATTGAATTAGCCTGAGCGCATATTACGACTCTAAATTGCCGAATTCAGTGTCAGATTATGTTATTTATCCAGCTTAATTAGACACTGGTTTTGAAATTATAATCAAAATTCAAAGTTTTTTCTGTTCAGAATGTTATGGTTTAAAACCCTAATCTGACAGTAATGGTAGAATTTGGATTCAAATATGTTGATCTTGAGCAAATAAAATGGATTTGTACCTTGCAACCCTGAAGCAAATTTGAATTAGGAGCTGTAGACTGGTGATACAAAAGAGAGTTACTACTTAGCTAATGACCGTGATGGTGAAATTCGGACTCGAATGTTGTGGTCTTTGGACTGTTATGTTGCTTATGGATCGAACTTGTTTGAAATAGTATGAATGGAACTTTTTCTTTTTGAAATTAAACATAATTGCTCAAGAATGTGAAATTAATACTTCAGTTGGGAATGAGGATTGCCAATCTGTGATTGGAATTTTTCTTGATTAATGCACATTCGTTCTTTATGGAGAGATTATCTCTCCCCCCCTCCTGGGGCTCAACATGCTTTCCTGTCATCAGGTTTGGATATTTTAATGGAGTTCTGACTTGTGGAAAAATTTAGGAATATCTTTAGACAATGCTAACATGGTTGCTCGTTGATTGATAGTTATTGGTTTTACTTGCATGCCTGTGCCTTTACTGTTATTTACACCTTTGATGTTTGCATTTTGGACAGGTGGCTAAAAGACTAGAGAACACGGCGAGATATTTCAAAAGGTTGGGCACATTTGGGTTTTGGGGACAGCTAATATGCACGATTGTTTCTGCTGTGATTCTTTCATTTTCTGTTGTAGTCACTGGAAAGATCACATCGCCTGTTACCTTCTACGCTACTGCCGGTGGAATTGCTGCCGCTTTTATATCTGTTTTTTGGTCATTTGGTTACCTTAGGCTATCAGAGAAACTCCGCAAAACAGCAAATGACCCATCAAAGGTATGACCAAAGAGAAAACTACCGTTTTATTGCTGTAGGCATTGTTCACCTTTTGCAATGGTTTGTCCTTTGTTCTTTCGCGTTTAACAGAAGTAGTCTTCAGTAAGCATTTAAATTGTCATTTTAGAGAATAGAATAGGACACTCAAACTCTGATTCATGTCCTCTTTTTCCACATTAATGTACCATGTATGATGTAATAGAAAGCTTAGGCTCAGTTCTGGACTCAAGTTGTGAAATTCACGATCATGGTCCTAAGCTTTGTAAGTATCGGTTGGCTTTCTCATCAATTAGGATTTCCTTCTGGGTAGTGACAGTATAAGCTGTACTGTTATCTGTTCTCTTTCATGGTTTTTCTGTAGTTTTATGGAGTAGTGTTTATAAAATTTGTATGGTTACCGCCATACAGATGCAGTCAAATCAGAAGTGGTGTAAAAAAAAATTGGAAAGCAAGAAATGGTATAAAATTGTGATCTGTAGTTTGTCATATTTTCCCCCATGTCCGAGTGCAATATAGATAAAGTTGTTATTTGCTCTTGACTTTAGTTTGGGAATTCCTCTCACAGGGACTGCAGTAACTCTCACTTGAATCTGCAAAATTTTCTACTTCTAGACTTTGTTTTGGCCTTTGTAGTTTCCATGCACTGGCAATTACTTCACTCTGTTTTGCTTTCAAAAATTTCCATAGATTTTATGTATGTGCATCTTAAACTTCTTTCTTTATGATTCTCTTATTTTCCTACTTCTTAGTCCTTTCCAATATGTGGTCTTTTGTGCTGTTTGATTTGAGTAGTGATAGTGAATAACAATCTGATTCTTAGATATTTTGTTATCCTTCTGCTCAAGAGTGATTTTATAGTTTTCTTAATGGTTTTAGGCTCCCCCACGTGCTGATGTTGTCAGAAGTCTGAAAAATGGAATAGCTGTGAATCTGCTTGGTATGGGTTCTGCTATCCTGGGAATGCAAGCCACTGTAGGATTACTTGTGGCAAAGGCGCTCACTACATCTGCAAATCCTTACTATCAGGGTGTAGCCCCTGGAGCTAGCCCTGTTCTTGCTCTGGACGTGTTCTTGGTCCAGGTATTCATCTTTGGAACCTAAGTTTTGAGCCACAGAAATGCAATATCTGTCTCATGCAATTTTGTGTATTCTTGTTTCACAATTCCTGCCCTCCCTATAGGCAAAATGACATATTATGGGATTCCTTTGTTGACTATGGGTTAATGCACTTGAAAACAATTTGAAGGTTATTTTATTAACATGCAAAACTGATGATAAATATTGCATGGTATTCTAAAGTGACAAGTATAATGTATTGGAACCCTAAAGTGACAACCAATATGGAACAAAAAATATTTGCTAAAAGAAGCACATACGGAGTTCGGGGGTGGGTGTTGGTGGGGGGTAAAAGGAAGAGCTAGAAAGTGTTCCAATTTATTTTCATTAATGTATCTTGTTATTTTGGTTTTAGATGGATGCATATGGTACATCTTGTCAAGGAGTCATGTTAACCCTGCATGCATCTTATGTTGGCACCTTGCCACAGTTGTGCTCACTCAGGGTTACAAATGTACCTAGCAACTTTATCTAATTTTCTTTTGTGATGAAAGTCGCTTCTACAATGCTGTGAAGGCATACTGTAAAGGTCAGGTGAGCATTTAAGCATACTATGAAAGGTCATGTGAGCATTTAGGGATGTCAATGGGGCGGATGAGGATGTAGGTCCCTCCATTCCTATCCCCACCTAAAATTTGCATCCAAATTAAAAAACTTAAAAGTCTCACCTACATTCATATATCATATTCAAACAAATCCAAACACAAAAAAATTGATCACTTTTAGATTTTTTTAAATACTTGATTTGATTTGACGGTATGAAGTGGGGCGGACGGGGATGGGGCAGGTCCAACACAAAATCCACACCCGCCCCATCACCCATGGCGGGTACGATATTTATACCCACCCCTGCCCCACCACCCACTAAACTTCCCCCCATCCCCGCCTACTTGGGGCAGATGCGGGGCGGGTCTCCCATAAATCCCGCCCCTCTGACATCCCTAAGCATTTCTGATGAGTGGAATGGACTCCATAAACAAGCTTTTGAGTCATACGTAATAAATCCAAATGACACTATCCTTTAAATACGATGTTCATCTGTTGGACATCATACAAAATGTAATGAACCAAACTCAGATTAGTTTCAGAAACCACGCATTTGGGGACCACTATGAAAGCCTAAAACCAGTGGAAAAAATAATTAAGAGGTTATCAGCTAGTTAGGCAAGTTGAAAGATTATATACTCTGTATGTAATAACCTCAAAAGTCTTCTGTGAACAATAATCACCCTAATCAAGTTCTTACTCCCAGCTCATCCCGCAACAAACTAAAAAGAGGGTAGAGGTCCTGATAAGATATTCCATAATTTTGTTGATTGATTTTTAAATTTTAATTATTAAATTCAATTCTCGTGAATTTCTTTCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCNACAGAAATGTATCTTCTTGACGAACTCTCAATAACTCATTTGCTTATTCCTCTTGCAGGCATCAGCTAACACTATACTGTCTCATTTCTTCGGTCTTGTTTCATCTTTGGAATTGTTGCGGTCAGTAACATTGCCTACTGGTCAAACTGCTCCTGTTGCCAAGACCGCTTAGAGTTTTTTTGTGCTCTTATTTTCAACTGTACACAAGTGAATTCTTGATGAATTTCTCGTAATGGTCACAGACAAATTTCCTGTTGATATTTGTGTGGTGAACTATGTCAATAACAGTTGTAATAAGAAAAGGTTGTTAGGGGGTGAGGATTAGATAGCTGATTTTATTCAAATTCATAATTATGATGGAAATCATATATTTTGTTTAGCAGCAGTAACTTGAGGAGTGGAGAGCTATTTTATGTGATGCAAGTGCAGTTCCCGCGAGTATATTTTCACCATTATTAAATTCTTATTTTCTACTTGGTGATTGTTTTTGTTCGCAATTTGTTGTGTCAGAGGTTCTTGGCCCAACTCTTTTTCGCTATTGTATGGAAGTGAGCGTATGCAGTTTGTCCTTTCTATATAAT

mRNA sequence

AGCTTACCTTCACTGATTTCACAACGAAAGCAAGCATATTTTAAAAAGATATTTTCCCTTTTTTTGGTTCCCTTTCCAATCTCTCATATTTTAGTTATGCAGACGCTACTCTTACCGGCGGCTCGCCCCGGCGTTCTGCCGCCGTCACCGGTGGTAACAACAGCCGCGCATTTACACCTTTCGAGGCGAATACCTATTTCCAGTCGCTTTCTTTCTCCTCCTCCGTCGTCGTCTTCTTTATCTTCCTACCTTCCTTCTCTCTCTTCGACACAATCGAGAACAATGGCGCACTGGCTTCCTCTAATGGCGTCTTCTCCTGCTTCCACGGGTTACGGTTCACCGGTTGATGAGTCCGACCAGGTTAAACTTACTCAGGTGGCTAAAAGACTAGAGAACACGGCGAGATATTTCAAAAGGTTGGGCACATTTGGGTTTTGGGGACAGCTAATATGCACGATTGTTTCTGCTGTGATTCTTTCATTTTCTGTTGTAGTCACTGGAAAGATCACATCGCCTGTTACCTTCTACGCTACTGCCGGTGGAATTGCTGCCGCTTTTATATCTGTTTTTTGGTCATTTGGTTACCTTAGGCTATCAGAGAAACTCCGCAAAACAGCAAATGACCCATCAAAGGCTCCCCCACGTGCTGATGTTGTCAGAAGTCTGAAAAATGGAATAGCTGTGAATCTGCTTGGTATGGGTTCTGCTATCCTGGGAATGCAAGCCACTGTAGGATTACTTGTGGCAAAGGCGCTCACTACATCTGCAAATCCTTACTATCAGGGTGTAGCCCCTGGAGCTAGCCCTGTTCTTGCTCTGGACGTGTTCTTGGTCCAGGCATCAGCTAACACTATACTGTCTCATTTCTTCGGTCTTGTTTCATCTTTGGAATTGTTGCGGTCAGTAACATTGCCTACTGGTCAAACTGCTCCTGTTGCCAAGACCGCTTAGAGTTTTTTTGTGCTCTTATTTTCAACTGTACACAAGTGAATTCTTGATGAATTTCTCGTAATGGTCACAGACAAATTTCCTGTTGATATTTGTGTGGTGAACTATGTCAATAACAGTTGTAATAAGAAAAGGTTGTTAGGGGGTGAGGATTAGATAGCTGATTTTATTCAAATTCATAATTATGATGGAAATCATATATTTTGTTTAGCAGCAGTAACTTGAGGAGTGGAGAGCTATTTTATGTGATGCAAGTGCAGTTCCCGCGAGTATATTTTCACCATTATTAAATTCTTATTTTCTACTTGGTGATTGTTTTTGTTCGCAATTTGTTGTGTCAGAGGTTCTTGGCCCAACTCTTTTTCGCTATTGTATGGAAGTGAGCGTATGCAGTTTGTCCTTTCTATATAAT

Coding sequence (CDS)

ATGCAGACGCTACTCTTACCGGCGGCTCGCCCCGGCGTTCTGCCGCCGTCACCGGTGGTAACAACAGCCGCGCATTTACACCTTTCGAGGCGAATACCTATTTCCAGTCGCTTTCTTTCTCCTCCTCCGTCGTCGTCTTCTTTATCTTCCTACCTTCCTTCTCTCTCTTCGACACAATCGAGAACAATGGCGCACTGGCTTCCTCTAATGGCGTCTTCTCCTGCTTCCACGGGTTACGGTTCACCGGTTGATGAGTCCGACCAGGTTAAACTTACTCAGGTGGCTAAAAGACTAGAGAACACGGCGAGATATTTCAAAAGGTTGGGCACATTTGGGTTTTGGGGACAGCTAATATGCACGATTGTTTCTGCTGTGATTCTTTCATTTTCTGTTGTAGTCACTGGAAAGATCACATCGCCTGTTACCTTCTACGCTACTGCCGGTGGAATTGCTGCCGCTTTTATATCTGTTTTTTGGTCATTTGGTTACCTTAGGCTATCAGAGAAACTCCGCAAAACAGCAAATGACCCATCAAAGGCTCCCCCACGTGCTGATGTTGTCAGAAGTCTGAAAAATGGAATAGCTGTGAATCTGCTTGGTATGGGTTCTGCTATCCTGGGAATGCAAGCCACTGTAGGATTACTTGTGGCAAAGGCGCTCACTACATCTGCAAATCCTTACTATCAGGGTGTAGCCCCTGGAGCTAGCCCTGTTCTTGCTCTGGACGTGTTCTTGGTCCAGGCATCAGCTAACACTATACTGTCTCATTTCTTCGGTCTTGTTTCATCTTTGGAATTGTTGCGGTCAGTAACATTGCCTACTGGTCAAACTGCTCCTGTTGCCAAGACCGCTTAG

Protein sequence

MQTLLLPAARPGVLPPSPVVTTAAHLHLSRRIPISSRFLSPPPSSSSLSSYLPSLSSTQSRTMAHWLPLMASSPASTGYGSPVDESDQVKLTQVAKRLENTARYFKRLGTFGFWGQLICTIVSAVILSFSVVVTGKITSPVTFYATAGGIAAAFISVFWSFGYLRLSEKLRKTANDPSKAPPRADVVRSLKNGIAVNLLGMGSAILGMQATVGLLVAKALTTSANPYYQGVAPGASPVLALDVFLVQASANTILSHFFGLVSSLELLRSVTLPTGQTAPVAKTA

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
Spo22253	Spo22253	gene

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
Spo22253.1	Spo22253.1-protein	polypeptide

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Spo22253.1.exon.1	Spo22253.1.exon.1	exon
Spo22253.1.exon.2	Spo22253.1.exon.2	exon
Spo22253.1.exon.3	Spo22253.1.exon.3	exon
Spo22253.1.exon.4	Spo22253.1.exon.4	exon

The following five_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Spo22253.1.utr5p.1	Spo22253.1.utr5p.1	five_prime_UTR

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Spo22253.1.CDS.1	Spo22253.1.CDS.1	CDS
Spo22253.1.CDS.2	Spo22253.1.CDS.2	CDS
Spo22253.1.CDS.3	Spo22253.1.CDS.3	CDS
Spo22253.1.CDS.4	Spo22253.1.CDS.4	CDS

The following three_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Spo22253.1.utr3p.1	Spo22253.1.utr3p.1	three_prime_UTR

Homology

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BLAST of Spo22253.1 vs. NCBI nr
Match: gi|902160953|gb|KNA06499.1| (hypothetical protein SOVF_180500 [Spinacia oleracea])

HSP 1 Score: 530.4 bits (1365), Expect = 1.900e-147
Identity = 284/284 (100.00%), Postives = 284/284 (100.00%), Query Frame = 1


		  
Query: 1   MQTLLLPAARPGVLPPSPVVTTAAHLHLSRRIPISSRFLSPPPSSSSLSSYLPSLSSTQS 60
           MQTLLLPAARPGVLPPSPVVTTAAHLHLSRRIPISSRFLSPPPSSSSLSSYLPSLSSTQS
Sbjct: 1   MQTLLLPAARPGVLPPSPVVTTAAHLHLSRRIPISSRFLSPPPSSSSLSSYLPSLSSTQS 60

Query: 61  RTMAHWLPLMASSPASTGYGSPVDESDQVKLTQVAKRLENTARYFKRLGTFGFWGQLICT 120
           RTMAHWLPLMASSPASTGYGSPVDESDQVKLTQVAKRLENTARYFKRLGTFGFWGQLICT
Sbjct: 61  RTMAHWLPLMASSPASTGYGSPVDESDQVKLTQVAKRLENTARYFKRLGTFGFWGQLICT 120

Query: 121 IVSAVILSFSVVVTGKITSPVTFYATAGGIAAAFISVFWSFGYLRLSEKLRKTANDPSKA 180
           IVSAVILSFSVVVTGKITSPVTFYATAGGIAAAFISVFWSFGYLRLSEKLRKTANDPSKA
Sbjct: 121 IVSAVILSFSVVVTGKITSPVTFYATAGGIAAAFISVFWSFGYLRLSEKLRKTANDPSKA 180

Query: 181 PPRADVVRSLKNGIAVNLLGMGSAILGMQATVGLLVAKALTTSANPYYQGVAPGASPVLA 240
           PPRADVVRSLKNGIAVNLLGMGSAILGMQATVGLLVAKALTTSANPYYQGVAPGASPVLA
Sbjct: 181 PPRADVVRSLKNGIAVNLLGMGSAILGMQATVGLLVAKALTTSANPYYQGVAPGASPVLA 240

Query: 241 LDVFLVQASANTILSHFFGLVSSLELLRSVTLPTGQTAPVAKTA 285
           LDVFLVQASANTILSHFFGLVSSLELLRSVTLPTGQTAPVAKTA
Sbjct: 241 LDVFLVQASANTILSHFFGLVSSLELLRSVTLPTGQTAPVAKTA 284

[Close]

BLAST of Spo22253.1 vs. NCBI nr
Match: gi|756179874|gb|AJK93572.1| (chloroplast protein TIC-21 [Suaeda glauca])

HSP 1 Score: 425.6 bits (1093), Expect = 6.700e-116
Identity = 235/288 (81.60%), Postives = 251/288 (87.15%), Query Frame = 1


		  
Query: 1   MQTLLLPAARPGVLPPSPVVTTAAHLHLSRRIPISSRFLSPPPS----SSSLSSYLPSLS 60
           MQTLLLPA R G+  P P  +T A  H SR++P  + F+SP  S    SSSLSS L  +S
Sbjct: 1   MQTLLLPAVRSGIPTPFPAKSTTALSHSSRQLPKLNHFISPLNSQCFLSSSLSSNLNHIS 60

Query: 61  STQSRTMAHWLPLMASSPASTGYGSPVDESDQVKLTQVAKRLENTARYFKRLGTFGFWGQ 120
           +  SR M H  PLMASS ASTG+ SP DESDQ+KL QVAKRL+NTARYFKRLGTFGFWGQ
Sbjct: 61  ALNSRNMVHLTPLMASSAASTGFASPADESDQIKLAQVAKRLQNTARYFKRLGTFGFWGQ 120

Query: 121 LICTIVSAVILSFSVVVTGKITSPVTFYATAGGIAAAFISVFWSFGYLRLSEKLRKTAND 180
           LICTIV+AVILSFSVVVTGKITSPVTFYATAGGIAAAFISVFWSFGYLRLSEKLR+TAND
Sbjct: 121 LICTIVAAVILSFSVVVTGKITSPVTFYATAGGIAAAFISVFWSFGYLRLSEKLRRTAND 180

Query: 181 PSKAPPRADVVRSLKNGIAVNLLGMGSAILGMQATVGLLVAKALTTSANPYYQGVAPGAS 240
           PSKAP RADVVRSLKNGIAVNLLGMGSAILGMQATVGLLVAKALTTSANPYYQG+APG+S
Sbjct: 181 PSKAPARADVVRSLKNGIAVNLLGMGSAILGMQATVGLLVAKALTTSANPYYQGIAPGSS 240

Query: 241 PVLALDVFLVQASANTILSHFFGLVSSLELLRSVTLPTGQTAPVAKTA 285
           PVLALDVFLVQASANT+LSHFFGLVSSLELLRSVTLPTGQT  V KTA
Sbjct: 241 PVLALDVFLVQASANTLLSHFFGLVSSLELLRSVTLPTGQTGSVPKTA 288

[Close]

BLAST of Spo22253.1 vs. NCBI nr
Match: gi|731360192|ref|XP_010691678.1| (PREDICTED: protein TIC 21, chloroplastic [Beta vulgaris subsp. vulgaris])

HSP 1 Score: 393.7 bits (1010), Expect = 2.800e-106
Identity = 218/289 (75.43%), Postives = 243/289 (84.08%), Query Frame = 1


		  
Query: 1   MQTLLLPAARPGVLPPSPVVTTAAHLHLSRRIPISSRFLSPPPSSSSLS-----SYLPSL 60
           MQTLLLPAAR G+ PP P VT AA  H SRR+     FLSPP S S LS     S+LPSL
Sbjct: 1   MQTLLLPAARSGIPPPFPAVTMAAQSHHSRRMRNFCCFLSPPNSLSPLSPPSSHSFLPSL 60

Query: 61  SSTQSRTMAHWLPLMASSPASTGYGSPVDESDQVKLTQVAKRLENTARYFKRLGTFGFWG 120
           +      M  + PLMAS     G+ SP DESDQ KL QVAKRLENTARYFKRLGTFGFW 
Sbjct: 61  TLKNPIKMVQFRPLMASG----GFSSPSDESDQAKLAQVAKRLENTARYFKRLGTFGFWA 120

Query: 121 QLICTIVSAVILSFSVVVTGKITSPVTFYATAGGIAAAFISVFWSFGYLRLSEKLRKTAN 180
           QL+CT+V+AVILSFS+VVTGKI+SP TFYATAGGIAAAFISVF+SFGYLRL++KLR+TAN
Sbjct: 121 QLVCTLVAAVILSFSIVVTGKISSPATFYATAGGIAAAFISVFFSFGYLRLADKLRRTAN 180

Query: 181 DPSKAPPRADVVRSLKNGIAVNLLGMGSAILGMQATVGLLVAKALTTSANPYYQGVAPGA 240
           DPSKAPPRADVVRSLKN I VN++G+GSAILGMQATVGLLVAK+LT+SA+PYYQG+APG+
Sbjct: 181 DPSKAPPRADVVRSLKNAIVVNVIGIGSAILGMQATVGLLVAKSLTSSASPYYQGIAPGS 240

Query: 241 SPVLALDVFLVQASANTILSHFFGLVSSLELLRSVTLPTGQTAPVAKTA 285
           SPVLALDVFLVQASANTILSHFFGLVSSLELLRSVT+P GQ +P AKTA
Sbjct: 241 SPVLALDVFLVQASANTILSHFFGLVSSLELLRSVTMPAGQASPAAKTA 285

[Close]

BLAST of Spo22253.1 vs. NCBI nr
Match: gi|747081830|ref|XP_011088208.1| (PREDICTED: protein TIC 21, chloroplastic [Sesamum indicum])

HSP 1 Score: 363.6 bits (932), Expect = 3.100e-97
Identity = 205/297 (69.02%), Postives = 235/297 (79.12%), Query Frame = 1


		  
Query: 1   MQTLLLPAARPGVLPPSPVVTTAAHLHLSRRIPISS-----RFLSPPPSSSSLSSY-LPS 60
           MQTLLLPAAR GV PP+P  T A    +SR +P  +     RF S P   SSLSS+ LP+
Sbjct: 1   MQTLLLPAARSGVAPPTPRCTAA----VSRTLPSDNARSFIRFSSTPDPHSSLSSFKLPT 60

Query: 61  -------LSSTQSRTMAHWLPLMASSPASTGYGSPVDESDQVKLTQVAKRLENTARYFKR 120
                  + S +SR        +AS P +  + SP DES++ KL QV+KRLENT+RYFKR
Sbjct: 61  TLALSYLIVSNRSRRT------LASPPIAAAFSSPTDESEKAKLAQVSKRLENTSRYFKR 120

Query: 121 LGTFGFWGQLICTIVSAVILSFSVVVTGKITSPVTFYATAGGIAAAFISVFWSFGYLRLS 180
           LG+FGFWGQL+CT+V+AVILSFS+V+TGK+TSP TFYATAGGIAAAFISVFWSFGY+RLS
Sbjct: 121 LGSFGFWGQLVCTVVAAVILSFSIVITGKVTSPATFYATAGGIAAAFISVFWSFGYIRLS 180

Query: 181 EKLRKTANDPSKAPPRADVVRSLKNGIAVNLLGMGSAILGMQATVGLLVAKALTTSANPY 240
           +KLR+TANDPSKAPPRADVVRSLKNGI +NLLGMG+AILGMQATVGLLVAKALTTSA PY
Sbjct: 181 DKLRRTANDPSKAPPRADVVRSLKNGIGLNLLGMGAAILGMQATVGLLVAKALTTSATPY 240

Query: 241 YQGVAPGASPVLALDVFLVQASANTILSHFFGLVSSLELLRSVTLPTGQTAPVAKTA 285
           YQG+ PG SPVLALDVFLVQASANTILSHF GL  SLELLRSVTLP  +  P+ K A
Sbjct: 241 YQGIPPGNSPVLALDVFLVQASANTILSHFLGLACSLELLRSVTLPPSENVPIPKMA 287

[Close]

BLAST of Spo22253.1 vs. NCBI nr
Match: gi|641840892|gb|KDO59809.1| (hypothetical protein CISIN_1g0235982mg [Citrus sinensis])

HSP 1 Score: 357.1 bits (915), Expect = 2.900e-95
Identity = 198/291 (68.04%), Postives = 231/291 (79.38%), Query Frame = 1


		  
Query: 1   MQTLLLPAARPGVLPPSPVVTTAAHLHLSRRIPISSR--FLSPPPSSSSLSSYLPSLSST 60
           MQTLLLPA R G+   SP    A+HL  +  + I +   FLS        S+ LPSL + 
Sbjct: 1   MQTLLLPAGRSGI---SPTAAAASHLRRAPSLNIGTNVSFLS--------SNSLPSLKTL 60

Query: 61  QSRTMA-----HWLPLMASSPASTGYGSPVDESDQVKLTQVAKRLENTARYFKRLGTFGF 120
           QS ++A     H  P++ASS     + S  DES++ KL QV+KRLENTAR+FKR G+FGF
Sbjct: 61  QSSSLANRGSKHCFPILASSQIPPTFTSQNDESEKAKLAQVSKRLENTARHFKRFGSFGF 120

Query: 121 WGQLICTIVSAVILSFSVVVTGKITSPVTFYATAGGIAAAFISVFWSFGYLRLSEKLRKT 180
           WGQL+CT+VSAVILSFS+++TGK+TSP TFY TAGGIAAAFISVFWSFGY+RLSEKLRKT
Sbjct: 121 WGQLVCTVVSAVILSFSIIITGKVTSPTTFYCTAGGIAAAFISVFWSFGYIRLSEKLRKT 180

Query: 181 ANDPSKAPPRADVVRSLKNGIAVNLLGMGSAILGMQATVGLLVAKALTTSANPYYQGVAP 240
           A+DPSKAPPRADVV+SLKNGI VNL+GMG+AILGMQATVGLLVAKALTTSANPYYQG+ P
Sbjct: 181 ASDPSKAPPRADVVKSLKNGIGVNLVGMGAAILGMQATVGLLVAKALTTSANPYYQGITP 240

Query: 241 GASPVLALDVFLVQASANTILSHFFGLVSSLELLRSVTLPTGQTAPVAKTA 285
           G SPVLALDVFLVQASANTILSHF GL+ SLELLRSVTLP  ++ PV + A
Sbjct: 241 GYSPVLALDVFLVQASANTILSHFLGLLFSLELLRSVTLPPSESIPVPRVA 280

[Close]

BLAST of Spo22253.1 vs. UniProtKB/TrEMBL
Match: A0A0K9QGR8_SPIOL (Uncharacterized protein OS=Spinacia oleracea GN=SOVF_180500 PE=4 SV=1)

HSP 1 Score: 530.4 bits (1365), Expect = 1.300e-147
Identity = 284/284 (100.00%), Postives = 284/284 (100.00%), Query Frame = 1


		  
Query: 1   MQTLLLPAARPGVLPPSPVVTTAAHLHLSRRIPISSRFLSPPPSSSSLSSYLPSLSSTQS 60
           MQTLLLPAARPGVLPPSPVVTTAAHLHLSRRIPISSRFLSPPPSSSSLSSYLPSLSSTQS
Sbjct: 1   MQTLLLPAARPGVLPPSPVVTTAAHLHLSRRIPISSRFLSPPPSSSSLSSYLPSLSSTQS 60

Query: 61  RTMAHWLPLMASSPASTGYGSPVDESDQVKLTQVAKRLENTARYFKRLGTFGFWGQLICT 120
           RTMAHWLPLMASSPASTGYGSPVDESDQVKLTQVAKRLENTARYFKRLGTFGFWGQLICT
Sbjct: 61  RTMAHWLPLMASSPASTGYGSPVDESDQVKLTQVAKRLENTARYFKRLGTFGFWGQLICT 120

Query: 121 IVSAVILSFSVVVTGKITSPVTFYATAGGIAAAFISVFWSFGYLRLSEKLRKTANDPSKA 180
           IVSAVILSFSVVVTGKITSPVTFYATAGGIAAAFISVFWSFGYLRLSEKLRKTANDPSKA
Sbjct: 121 IVSAVILSFSVVVTGKITSPVTFYATAGGIAAAFISVFWSFGYLRLSEKLRKTANDPSKA 180

Query: 181 PPRADVVRSLKNGIAVNLLGMGSAILGMQATVGLLVAKALTTSANPYYQGVAPGASPVLA 240
           PPRADVVRSLKNGIAVNLLGMGSAILGMQATVGLLVAKALTTSANPYYQGVAPGASPVLA
Sbjct: 181 PPRADVVRSLKNGIAVNLLGMGSAILGMQATVGLLVAKALTTSANPYYQGVAPGASPVLA 240

Query: 241 LDVFLVQASANTILSHFFGLVSSLELLRSVTLPTGQTAPVAKTA 285
           LDVFLVQASANTILSHFFGLVSSLELLRSVTLPTGQTAPVAKTA
Sbjct: 241 LDVFLVQASANTILSHFFGLVSSLELLRSVTLPTGQTAPVAKTA 284

[Close]

BLAST of Spo22253.1 vs. UniProtKB/TrEMBL
Match: A0A0C5B952_9CARY (Suaeda glauca chloroplast protein TIC-21 mRNA OS=Suaeda glauca PE=2 SV=1)

HSP 1 Score: 425.6 bits (1093), Expect = 4.600e-116
Identity = 235/288 (81.60%), Postives = 251/288 (87.15%), Query Frame = 1


		  
Query: 1   MQTLLLPAARPGVLPPSPVVTTAAHLHLSRRIPISSRFLSPPPS----SSSLSSYLPSLS 60
           MQTLLLPA R G+  P P  +T A  H SR++P  + F+SP  S    SSSLSS L  +S
Sbjct: 1   MQTLLLPAVRSGIPTPFPAKSTTALSHSSRQLPKLNHFISPLNSQCFLSSSLSSNLNHIS 60

Query: 61  STQSRTMAHWLPLMASSPASTGYGSPVDESDQVKLTQVAKRLENTARYFKRLGTFGFWGQ 120
           +  SR M H  PLMASS ASTG+ SP DESDQ+KL QVAKRL+NTARYFKRLGTFGFWGQ
Sbjct: 61  ALNSRNMVHLTPLMASSAASTGFASPADESDQIKLAQVAKRLQNTARYFKRLGTFGFWGQ 120

Query: 121 LICTIVSAVILSFSVVVTGKITSPVTFYATAGGIAAAFISVFWSFGYLRLSEKLRKTAND 180
           LICTIV+AVILSFSVVVTGKITSPVTFYATAGGIAAAFISVFWSFGYLRLSEKLR+TAND
Sbjct: 121 LICTIVAAVILSFSVVVTGKITSPVTFYATAGGIAAAFISVFWSFGYLRLSEKLRRTAND 180

Query: 181 PSKAPPRADVVRSLKNGIAVNLLGMGSAILGMQATVGLLVAKALTTSANPYYQGVAPGAS 240
           PSKAP RADVVRSLKNGIAVNLLGMGSAILGMQATVGLLVAKALTTSANPYYQG+APG+S
Sbjct: 181 PSKAPARADVVRSLKNGIAVNLLGMGSAILGMQATVGLLVAKALTTSANPYYQGIAPGSS 240

Query: 241 PVLALDVFLVQASANTILSHFFGLVSSLELLRSVTLPTGQTAPVAKTA 285
           PVLALDVFLVQASANT+LSHFFGLVSSLELLRSVTLPTGQT  V KTA
Sbjct: 241 PVLALDVFLVQASANTLLSHFFGLVSSLELLRSVTLPTGQTGSVPKTA 288

[Close]

BLAST of Spo22253.1 vs. UniProtKB/TrEMBL
Match: A0A0J8EDT6_BETVU (Uncharacterized protein OS=Beta vulgaris subsp. vulgaris GN=BVRB_9g223880 PE=4 SV=1)

HSP 1 Score: 393.7 bits (1010), Expect = 2.000e-106
Identity = 218/289 (75.43%), Postives = 243/289 (84.08%), Query Frame = 1


		  
Query: 1   MQTLLLPAARPGVLPPSPVVTTAAHLHLSRRIPISSRFLSPPPSSSSLS-----SYLPSL 60
           MQTLLLPAAR G+ PP P VT AA  H SRR+     FLSPP S S LS     S+LPSL
Sbjct: 1   MQTLLLPAARSGIPPPFPAVTMAAQSHHSRRMRNFCCFLSPPNSLSPLSPPSSHSFLPSL 60

Query: 61  SSTQSRTMAHWLPLMASSPASTGYGSPVDESDQVKLTQVAKRLENTARYFKRLGTFGFWG 120
           +      M  + PLMAS     G+ SP DESDQ KL QVAKRLENTARYFKRLGTFGFW 
Sbjct: 61  TLKNPIKMVQFRPLMASG----GFSSPSDESDQAKLAQVAKRLENTARYFKRLGTFGFWA 120

Query: 121 QLICTIVSAVILSFSVVVTGKITSPVTFYATAGGIAAAFISVFWSFGYLRLSEKLRKTAN 180
           QL+CT+V+AVILSFS+VVTGKI+SP TFYATAGGIAAAFISVF+SFGYLRL++KLR+TAN
Sbjct: 121 QLVCTLVAAVILSFSIVVTGKISSPATFYATAGGIAAAFISVFFSFGYLRLADKLRRTAN 180

Query: 181 DPSKAPPRADVVRSLKNGIAVNLLGMGSAILGMQATVGLLVAKALTTSANPYYQGVAPGA 240
           DPSKAPPRADVVRSLKN I VN++G+GSAILGMQATVGLLVAK+LT+SA+PYYQG+APG+
Sbjct: 181 DPSKAPPRADVVRSLKNAIVVNVIGIGSAILGMQATVGLLVAKSLTSSASPYYQGIAPGS 240

Query: 241 SPVLALDVFLVQASANTILSHFFGLVSSLELLRSVTLPTGQTAPVAKTA 285
           SPVLALDVFLVQASANTILSHFFGLVSSLELLRSVT+P GQ +P AKTA
Sbjct: 241 SPVLALDVFLVQASANTILSHFFGLVSSLELLRSVTMPAGQASPAAKTA 285

[Close]

BLAST of Spo22253.1 vs. UniProtKB/TrEMBL
Match: A0A067EXD9_CITSI (Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g0235982mg PE=4 SV=1)

HSP 1 Score: 357.1 bits (915), Expect = 2.000e-95
Identity = 198/291 (68.04%), Postives = 231/291 (79.38%), Query Frame = 1


		  
Query: 1   MQTLLLPAARPGVLPPSPVVTTAAHLHLSRRIPISSR--FLSPPPSSSSLSSYLPSLSST 60
           MQTLLLPA R G+   SP    A+HL  +  + I +   FLS        S+ LPSL + 
Sbjct: 1   MQTLLLPAGRSGI---SPTAAAASHLRRAPSLNIGTNVSFLS--------SNSLPSLKTL 60

Query: 61  QSRTMA-----HWLPLMASSPASTGYGSPVDESDQVKLTQVAKRLENTARYFKRLGTFGF 120
           QS ++A     H  P++ASS     + S  DES++ KL QV+KRLENTAR+FKR G+FGF
Sbjct: 61  QSSSLANRGSKHCFPILASSQIPPTFTSQNDESEKAKLAQVSKRLENTARHFKRFGSFGF 120

Query: 121 WGQLICTIVSAVILSFSVVVTGKITSPVTFYATAGGIAAAFISVFWSFGYLRLSEKLRKT 180
           WGQL+CT+VSAVILSFS+++TGK+TSP TFY TAGGIAAAFISVFWSFGY+RLSEKLRKT
Sbjct: 121 WGQLVCTVVSAVILSFSIIITGKVTSPTTFYCTAGGIAAAFISVFWSFGYIRLSEKLRKT 180

Query: 181 ANDPSKAPPRADVVRSLKNGIAVNLLGMGSAILGMQATVGLLVAKALTTSANPYYQGVAP 240
           A+DPSKAPPRADVV+SLKNGI VNL+GMG+AILGMQATVGLLVAKALTTSANPYYQG+ P
Sbjct: 181 ASDPSKAPPRADVVKSLKNGIGVNLVGMGAAILGMQATVGLLVAKALTTSANPYYQGITP 240

Query: 241 GASPVLALDVFLVQASANTILSHFFGLVSSLELLRSVTLPTGQTAPVAKTA 285
           G SPVLALDVFLVQASANTILSHF GL+ SLELLRSVTLP  ++ PV + A
Sbjct: 241 GYSPVLALDVFLVQASANTILSHFLGLLFSLELLRSVTLPPSESIPVPRVA 280

[Close]

BLAST of Spo22253.1 vs. UniProtKB/TrEMBL
Match: A0A068TMS2_COFCA (Uncharacterized protein OS=Coffea canephora GN=GSCOC_T00014487001 PE=4 SV=1)

HSP 1 Score: 354.8 bits (909), Expect = 1.000e-94
Identity = 204/290 (70.34%), Postives = 229/290 (78.97%), Query Frame = 1


		  
Query: 1   MQTLLLPAARPGVLPPSP----VVTTAAHLHLSRRIPISSRFLSPPPSSSS--LSSYLPS 60
           MQTLL+PAAR G  P +P    V +  +  HL R    SS  L+P   S S  L ++ P 
Sbjct: 1   MQTLLVPAARSGTAPLAPPHSGVYSNPSLPHLLRLSHQSSLHLAPLSLSFSKLLKTHQPL 60

Query: 61  LSSTQSRTMAHWLPLMASSPASTGYGSPVDESDQVKLTQVAKRLENTARYFKRLGTFGFW 120
            S   S         +AS   ST Y +P D++++ KL QVAKRLE+T+RYFKRLG  GFW
Sbjct: 61  FSPQLSAFDNRLFKTLASGTVSTHYPAPNDDAEKAKLAQVAKRLESTSRYFKRLGGLGFW 120

Query: 121 GQLICTIVSAVILSFSVVVTGKITSPVTFYATAGGIAAAFISVFWSFGYLRLSEKLRKTA 180
           GQL+CT+V+AVILSFSVV+TGKITSP TFYATAGGIAAAFISVFWSFGY+RLSEKLRKTA
Sbjct: 121 GQLVCTLVAAVILSFSVVITGKITSPATFYATAGGIAAAFISVFWSFGYIRLSEKLRKTA 180

Query: 181 NDPSKAPPRADVVRSLKNGIAVNLLGMGSAILGMQATVGLLVAKALTTSANPYYQGVAPG 240
           NDPSKAPPRADVV+SLKNGI VNLLGMG+AILGMQATVGLLVAKALTTSANPYYQGVAPG
Sbjct: 181 NDPSKAPPRADVVKSLKNGIVVNLLGMGAAILGMQATVGLLVAKALTTSANPYYQGVAPG 240

Query: 241 ASPVLALDVFLVQASANTILSHFFGLVSSLELLRSVTLPTGQTAPVAKTA 285
           +SPVLALDVFLVQASANTILSHF GLV SLELLRSVTLP  ++ PV K A
Sbjct: 241 SSPVLALDVFLVQASANTILSHFLGLVFSLELLRSVTLPPSESIPVFKAA 290

[Close]

BLAST of Spo22253.1 vs. ExPASy Swiss-Prot
Match: TIC21_ARATH (Protein TIC 21, chloroplastic OS=Arabidopsis thaliana GN=TIC21 PE=1 SV=1)

HSP 1 Score: 298.5 bits (763), Expect = 7.700e-80
Identity = 185/306 (60.46%), Postives = 221/306 (72.22%), Query Frame = 1


		  
Query: 1   MQTLLLP-AARPGVLPPSPVVTTAAHLHL-------SRRIPISSRFLSPPPSSSSLSSYL 60
           MQ+LLLP A+  GV   S V       H        +R +P+ +  L  P   +++SSY 
Sbjct: 1   MQSLLLPPASSSGV---SAVALRPGFQHSFNHQSLSTRSLPLFNPLLLAPKKKTTISSYQ 60

Query: 61  --PSLS-----------STQSRTMAHWLPLMASSPASTGYGSPVD-ESDQVKLTQVAKRL 120
             PSLS           S    T+A   P   +SP+S     P D E D+ KL QVAKRL
Sbjct: 61  SPPSLSVYGFQIGGSKPSFTPSTVAFSYP---TSPSSV----PGDNEVDKAKLAQVAKRL 120

Query: 121 ENTARYFKRLGTFGFWGQLICTIVSAVILSFSVVVTGKITSPVTFYATAGGIAAAFISVF 180
           E T+RYFKRLG+ GFWGQL+ T+V+AVILSFS+VVTGK TSP TFYATA GIAAAF+SVF
Sbjct: 121 EKTSRYFKRLGSIGFWGQLVSTVVAAVILSFSIVVTGKPTSPATFYATASGIAAAFVSVF 180

Query: 181 WSFGYLRLSEKLRKTANDPSKAPPRADVVRSLKNGIAVNLLGMGSAILGMQATVGLLVAK 240
           WSFGY+RLSE+LR+T+ DP+KAPPRADVV+ L++GI VN+LGMGSA+LGMQATVG LVAK
Sbjct: 181 WSFGYIRLSERLRRTSIDPAKAPPRADVVKGLRSGIMVNILGMGSALLGMQATVGFLVAK 240

Query: 241 ALTTSANPYYQGVAPGASPVLALDVFLVQASANTILSHFFGLVSSLELLRSVTLPTGQTA 285
           ALTTSANP+YQGV+ G SPVLALDVFLVQASANT+LSHF GLV SLELLRSVT+P  ++ 
Sbjct: 241 ALTTSANPFYQGVSQGYSPVLALDVFLVQASANTLLSHFLGLVCSLELLRSVTVPNSESV 296

[Close]

BLAST of Spo22253.1 vs. TAIR (Arabidopsis)
Match: AT2G15290.1 (translocon at inner membrane of chloroplasts 21)

HSP 1 Score: 298.5 bits (763), Expect = 4.300e-81
Identity = 185/306 (60.46%), Postives = 221/306 (72.22%), Query Frame = 1


		  
Query: 1   MQTLLLP-AARPGVLPPSPVVTTAAHLHL-------SRRIPISSRFLSPPPSSSSLSSYL 60
           MQ+LLLP A+  GV   S V       H        +R +P+ +  L  P   +++SSY 
Sbjct: 1   MQSLLLPPASSSGV---SAVALRPGFQHSFNHQSLSTRSLPLFNPLLLAPKKKTTISSYQ 60

Query: 61  --PSLS-----------STQSRTMAHWLPLMASSPASTGYGSPVD-ESDQVKLTQVAKRL 120
             PSLS           S    T+A   P   +SP+S     P D E D+ KL QVAKRL
Sbjct: 61  SPPSLSVYGFQIGGSKPSFTPSTVAFSYP---TSPSSV----PGDNEVDKAKLAQVAKRL 120

Query: 121 ENTARYFKRLGTFGFWGQLICTIVSAVILSFSVVVTGKITSPVTFYATAGGIAAAFISVF 180
           E T+RYFKRLG+ GFWGQL+ T+V+AVILSFS+VVTGK TSP TFYATA GIAAAF+SVF
Sbjct: 121 EKTSRYFKRLGSIGFWGQLVSTVVAAVILSFSIVVTGKPTSPATFYATASGIAAAFVSVF 180

Query: 181 WSFGYLRLSEKLRKTANDPSKAPPRADVVRSLKNGIAVNLLGMGSAILGMQATVGLLVAK 240
           WSFGY+RLSE+LR+T+ DP+KAPPRADVV+ L++GI VN+LGMGSA+LGMQATVG LVAK
Sbjct: 181 WSFGYIRLSERLRRTSIDPAKAPPRADVVKGLRSGIMVNILGMGSALLGMQATVGFLVAK 240

Query: 241 ALTTSANPYYQGVAPGASPVLALDVFLVQASANTILSHFFGLVSSLELLRSVTLPTGQTA 285
           ALTTSANP+YQGV+ G SPVLALDVFLVQASANT+LSHF GLV SLELLRSVT+P  ++ 
Sbjct: 241 ALTTSANPFYQGVSQGYSPVLALDVFLVQASANTLLSHFLGLVCSLELLRSVTVPNSESV 296

The following BLAST results are available for this feature:

BLAST of Spo22253.1 vs. NCBI nr
BLAST of Spo22253.1 vs. UniProtKB/TrEMBL
BLAST of Spo22253.1 vs. ExPASy Swiss-Prot
BLAST of Spo22253.1 vs. TAIR (Arabidopsis)

BLAST of Spo22253.1 vs. NCBI nr
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. NCBI nr)
Total hits: 5


Match Name	E-value	Identity	Description
gi\|902160953\|gb\|KNA06499.1\|	1.9e-147	100.	hypothetical protein SOVF_1805...	[more]
gi\|756179874\|gb\|AJK93572.1\|	6.7e-116	81.6	chloroplast protein TIC-21 [Su...	[more]
gi\|731360192\|ref\|XP_010691678.1\|	2.8e-106	75.4	PREDICTED: protein TIC 21, chl...	[more]
gi\|747081830\|ref\|XP_011088208.1\|	3.1e-97	69.0	PREDICTED: protein TIC 21, chl...	[more]
gi\|641840892\|gb\|KDO59809.1\|	2.9e-95	68.0	hypothetical protein CISIN_1g0...	[more]

BLAST of Spo22253.1 vs. UniProtKB/TrEMBL
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. UniprotKB/TrEMBL)
Total hits: 5


Match Name	E-value	Identity	Description
A0A0K9QGR8_SPIOL	1.3e-147	100.	Uncharacterized protein OS=Spi...	[more]
A0A0C5B952_9CARY	4.6e-116	81.6	Suaeda glauca chloroplast prot...	[more]
A0A0J8EDT6_BETVU	2.0e-106	75.4	Uncharacterized protein OS=Bet...	[more]
A0A067EXD9_CITSI	2.0e-95	68.0	Uncharacterized protein OS=Cit...	[more]
A0A068TMS2_COFCA	1.0e-94	70.3	Uncharacterized protein OS=Cof...	[more]

BLAST of Spo22253.1 vs. ExPASy Swiss-Prot
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. ExPASy SwissProt)
Total hits: 1


Match Name	E-value	Identity	Description
TIC21_ARATH	7.7e-80	60.4	Protein TIC 21, chloroplastic ...	[more]

BLAST of Spo22253.1 vs. TAIR (Arabidopsis)
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. TAIR)
Total hits: 1


Match Name	E-value	Identity	Description
AT2G15290.1	4.3e-81	60.4	translocon at inner membrane o...	[more]

InterPro

Analysis Name: InterPro Annotations of S. oleracea
Date Performed: 2018-06-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR022051	Protein of unknown function DUF3611	PFAM	PF12263	DUF3611	coord: 96..270 score: 8.8
None	No IPR available	PANTHER	PTHR34548	FAMILY NOT NAMED	coord: 1..284 score: 7.5E
None	No IPR available	PANTHER	PTHR34548:SF2	PROTEIN TIC 21, CHLOROPLASTIC	coord: 1..284 score: 7.5E

GO Annotation

GO Assignments

This mRNA is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006875	cellular metal ion homeostasis
biological_process	GO:0015677	copper ion import
biological_process	GO:0035434	copper ion transmembrane transport
biological_process	GO:0034755	iron ion transmembrane transport
biological_process	GO:0045037	protein import into chloroplast stroma
cellular_component	GO:0009706	chloroplast inner membrane
cellular_component	GO:0016021	integral component of membrane
molecular_function	GO:0005375	copper ion transmembrane transporter activity
molecular_function	GO:0005381	iron ion transmembrane transporter activity
molecular_function	GO:0042803	protein homodimerization activity