Spo25425.1 (mRNA) | SpinachBase

Overview


Name	Spo25425.1
Type	mRNA
Organism	Spinacia oleracea (Spinach)
Description	Mitochondrial pyruvate carrier 4
Location	SpoScf_02464 : 45066 .. 49162 (-)
Sequence length	553

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonpolypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

TGAACCATTTTTTTAAAGAAAACAGAAAGCAACCCAAATTGAAAGCCAAAAGGTCAAATTTGGGATCTTTCATCTATTATCAAGTAGTCAAGTTTATTCGAGCTGAAGAGAAGGGAGTCCCGCGGTCCCGCCTGAGACATTCCACCATTAACCGACGGCTGGGAGGTTGTTGATCGACGACTCACATCCAATTCTGCGTTTCATCCCAATTTCTAGGTATTGTTTTTCGCAAATCTTCGTTAATTGCGATTATGATTTTACCAATCCCTACAACTTCATTGCGATGAATTCATAAAAAAACACTCCTAAATTCCACGGCTATGCTTCTTGATCTATTTTTTTTGCTTTCAGTTTTGATTAAATTAACATGTATAGCTTCTATATACCTTATTTTTGCCTTCTAAATTTAGGGATTGCAAGTAAACAATGTCGTTTATTGGGCTCATATCCAATTTTCGAAAGTTTACATTGTTTTTAACCTCAATTCAAGCTGCAAAATTAGATTAGTTGTTCATATTTCTTATTTTAAAGCATTATTTTTTGCAGAGTTTAATCTTGGAATCTGTTGTATGTATCCACGTATTGGATACTTGGTTTATAGTTGAATTTAGTATATTTATGCAAAATGTTGTGTCATTTGAATGGTCTTGTTCTGTCTGATCTCGTTAAATACTTGTTGTTAACCTTATATTCTTACTTTGTCAAAAGTTCATTACCTTTCCTAAAGCTCAAAAGTGAACCAATCAGTACTTCCTTTAAGTCCAACTTCTCTAAGGAAGTGAGCATCAACTAAATGAAACTACTTCTTAGTACGACGCGTTTGGTACGGTGTAGGAATACTTTGAGATATGTGAAGAGTAGTAATCTTCCTAGTGCTATTGGTTTCTTATGTGGATAACGATTATACAAAGACTTGGAATGATTAAAGAGTAGGGGGCGGGGGGAGTGTTGTTGGTTTATTATTCTGAAGTATGAACTAATAGTCTAATAGGAGGTCACGTTTGGATTTTCACTCTAGAGGAGGGACCATTTTTGGGGGAAGATCTTATGGAAGTGGATGGTTTTATACAATTATGAGATAGGATTAACCCTTCTCAATTTACACAACTCTTAGACGCAATGTTGAATGGAAAAAGTATCAACTTGTACGTTTGTATTTTGCATTTCATATGTGTTCTTTACATGTTTCCATGCTGACAATCTTGGTGCTGTTTGAATGTCCCTATGATGAATTGTTTGAGATATTGGAAATGGGTAGATCAATATATAGAAAATATAGGCTATTAATACTTGTGTAGATTCAAGTGAAATTGATAAGATGTGTGCTAGGTTGTTGAAACTAAGATTTTAGTTATGATTAACTTCAAGTCTTAATTGATAAAATTCTATGAATTTCTTTGACTTTTAGTAAAAATGATACTTCTTTTATTTTATAACAAATTATTTCATTGATAGAAAAATATGAAATTTCTAATGATATGTGATTGGGAACTATTTGGTATTAGAAAAATGATTTATTATCTTGAAACATTGTATGTTGGATCGGATCGTTGAATCGGATCGTATTAAGATCCTACCACTCCAACATTTTATCGAAGTAGGATCACCAATATTAAGATCCTACCTAAGATCCGGATCGTTGGCGTGTTTTTCGATCGTAGAGTCATAAGATCCGGATCGAGAGTATAACGATCATGTTCGTTTGTCATCTTCACATTATTTTTCCTGGGAATGTTGTTGGCCTTTCTTTAAGTCACTTCATCAGTTCATTGTGACACCAACTTGGCTTGAGAAGATGACAAGTTGCAAAAACAATGAATATTTGTAATGTAGAAGTTTTGTATTGTAGTTAAGAAGTTCTGCTGAAGGATCAACTTTTTCTTGGCTTGTTCCTTTACTAGGTTGGAAATGTTTTAGTATTATGTGATGTCTAAGCTGTTGGTGTAGGTGTTTATCTGGGAGTTAAGTGCAAAAATGTTTTTGCTACTGAGGATTTGCCAATACTCATAGCTTGCTTACAGAGGAAAGGGAGATAGCTATTTTCCAGTATCTAACTTTTTATTCTTGTTTTTTCTCCTTACAGGCGATATATGGCTTCTACTTTCCGTGCATTTTTGAACAGTCCTGTTGGCCCTAAAACAACTCATTTTTGGGGCCCTGTTGCCAACTGGGGATTCGTTGCTGCTGTATGCTTCTTTACTCTAATTGAAAACATATAAATAACTTTTGTTAATTGAGCTTTGCAACTTATTGTCTGTGTTTTCTATGGAACTGACAGGGGCTTGTGGACATGAATAAACCTCCTGAAAAGATATCTGGCAACATGAGTGCAGGTTTACATTGCTGCTGATTTTACAAAGAAAGTATACTTTCATTATGCATATTGTGATAGTTATCTGATTTTATGCCCTTGTTTTTGGTGTTTCAGCGATGTGTGTTTATTCAGGATTATTCATGAGGTTTGCGTGGATGGTTCAGCCTCGTAATTACTTACTTCTAGCATGCCATGCTTCAAATGAGACTGTTCAACTATACCAACTTTCCCGGTGGGCAAGGGCTAATGGGTAAGGTTTTAGAAGTATTTCCTTGTTCAGACATTCCACGTTTGCTACTTAATTTTGGCTGCATGTTTTCCGTTTGTTGTAATGAATGCAATAAAGATTAACAAAGAACGACAAACAAGAACACCCAGGTTTAACGTGATTTACTAACAATGTGATAACTATGTCTACACGCAGAGGAGAGGAAGTTTTATTGATCTTGAGGAGAATAGATTACAGATTCAGACTTGGTTAATGACCTAGGAAGTTTATTTATTACCTCCAAAATAGCCAATAGGCACCAAATAGACCTAAACAAAAAACTGTAGGCCAACATAAAAAATATTGTGCTGGGTCACTCTAAAAGAGAAACATATCAACTATCAAGGCATATCCCACACTTTTTTGTTCTTCCGTTTTGATGGAATCAAGGACGGGCTTTCCAACTTTCCTTCTCAGTTTCCACTTTGAAACTTTTATGAAGTTGGTGCTTTCTCATGTTAAGAAAAGGTAATAGTTTGTAGGGATAGATTATGATTTAGTTAGTGACTTAGGTATATTGTCTGTGAAACAGGAGTATGCTTGAAACATTTAATTTCCTAGATTTTGGCAGTGGAGCTGAGCTGGTTGGACCTATTTAAGGGATATCAGCTAGCCAAACCCATTATTTCTTTAATAGCTTAGAAGTTGGAAGGCTAGTTGAATACATACGGTCTTGCAGAGTACTCCATAGTATAGTTATTAACAGATTGGATCTCATAGTATTTAGCTCTCAGTCTAGGGAGCCATGGAACATGGAAGTAGCAACATTTCAAAAGCTATTATTTTACACCAAGATATCTAGAATTGAAGGTCCATTTTGACAAGTCAACGGAACTCAGCCCCTTTGTTTTGTAAGTTCTAATCCAAGGTGTGGTGGGATATCATAATTTGCATTAGTTTAATCGTAGAAAAAACAAACTAAACTTGAAACCATATCCAACCCATTCAGATAGACCAAAATTTGTGGTGTATGTCTGTGTCTTGACCAAACTGAACTTTTAAAGTATTGAGTAACCTCAAGAGTCCAGATCAGAAGAAAGGAGAGAATAAATGAGATACAGCCTGAAATTGGTTGATAACTTGTTTCTAAACTGAAAAATATCTCAATCTAAAGATACCCTGACAGGGAAAACTAAAGCACCAACAGTCATGGCTAACGAGTGACTGAGAATACTAGAAAGAATTTGGTCATTATTTTTAGCTTACAAATACAAAACACACAACACTTACCGATCTAGGATAGTTACACTTACATGTTATCTATTGCTCTTTTACAGGTTTATGATTTAGATTTATGTGCCTTAAATTTTTGGTGGATCATTTTATATAGTTAAAGTGCAGATGAATGGATGTTTCATTGTTTCAGTTGGACATTGATGGATTTAAATGTTAATGCAGTTGTGGACTTACTGTTTTGTGTTCACTGCAAGTGCTGTGGCTTCTATAACAAATATTATTGATCTATTATGCAGGTACTTGTCTCAAAAGAAAGACGAAGATACATCATCACAATGA

mRNA sequence

TGAACCATTTTTTTAAAGAAAACAGAAAGCAACCCAAATTGAAAGCCAAAAGGTCAAATTTGGGATCTTTCATCTATTATCAAGTAGTCAAGTTTATTCGAGCTGAAGAGAAGGGAGTCCCGCGGTCCCGCCTGAGACATTCCACCATTAACCGACGGCTGGGAGGTTGTTGATCGACGACTCACATCCAATTCTGCGTTTCATCCCAATTTCTAGGCGATATATGGCTTCTACTTTCCGTGCATTTTTGAACAGTCCTGTTGGCCCTAAAACAACTCATTTTTGGGGCCCTGTTGCCAACTGGGGATTCGTTGCTGCTGGGCTTGTGGACATGAATAAACCTCCTGAAAAGATATCTGGCAACATGAGTGCAGCGATGTGTGTTTATTCAGGATTATTCATGAGGTTTGCGTGGATGGTTCAGCCTCGTAATTACTTACTTCTAGCATGCCATGCTTCAAATGAGACTGTTCAACTATACCAACTTTCCCGGTGGGCAAGGGCTAATGGGTACTTGTCTCAAAAGAAAGACGAAGATACATCATCACAATGA

Coding sequence (CDS)

ATGGCTTCTACTTTCCGTGCATTTTTGAACAGTCCTGTTGGCCCTAAAACAACTCATTTTTGGGGCCCTGTTGCCAACTGGGGATTCGTTGCTGCTGGGCTTGTGGACATGAATAAACCTCCTGAAAAGATATCTGGCAACATGAGTGCAGCGATGTGTGTTTATTCAGGATTATTCATGAGGTTTGCGTGGATGGTTCAGCCTCGTAATTACTTACTTCTAGCATGCCATGCTTCAAATGAGACTGTTCAACTATACCAACTTTCCCGGTGGGCAAGGGCTAATGGGTACTTGTCTCAAAAGAAAGACGAAGATACATCATCACAATGA

Protein sequence

MASTFRAFLNSPVGPKTTHFWGPVANWGFVAAGLVDMNKPPEKISGNMSAAMCVYSGLFMRFAWMVQPRNYLLLACHASNETVQLYQLSRWARANGYLSQKKDEDTSSQ

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
Spo25425	Spo25425	gene

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
Spo25425.1	Spo25425.1-protein	polypeptide

The following five_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Spo25425.1.utr5p.2	Spo25425.1.utr5p.2	five_prime_UTR
Spo25425.1.utr5p.1	Spo25425.1.utr5p.1	five_prime_UTR

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Spo25425.1.CDS.4	Spo25425.1.CDS.4	CDS
Spo25425.1.CDS.3	Spo25425.1.CDS.3	CDS
Spo25425.1.CDS.2	Spo25425.1.CDS.2	CDS
Spo25425.1.CDS.1	Spo25425.1.CDS.1	CDS

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Spo25425.1.exon.5	Spo25425.1.exon.5	exon
Spo25425.1.exon.4	Spo25425.1.exon.4	exon
Spo25425.1.exon.3	Spo25425.1.exon.3	exon
Spo25425.1.exon.2	Spo25425.1.exon.2	exon
Spo25425.1.exon.1	Spo25425.1.exon.1	exon

Homology

[Close]

BLAST of Spo25425.1 vs. NCBI nr
Match: gi|902239928|gb|KNA25800.1| (hypothetical protein SOVF_003510 [Spinacia oleracea])

HSP 1 Score: 231.1 bits (588), Expect = 9.200e-58
Identity = 109/109 (100.00%), Postives = 109/109 (100.00%), Query Frame = 1


		  
Query: 1   MASTFRAFLNSPVGPKTTHFWGPVANWGFVAAGLVDMNKPPEKISGNMSAAMCVYSGLFM 60
           MASTFRAFLNSPVGPKTTHFWGPVANWGFVAAGLVDMNKPPEKISGNMSAAMCVYSGLFM
Sbjct: 1   MASTFRAFLNSPVGPKTTHFWGPVANWGFVAAGLVDMNKPPEKISGNMSAAMCVYSGLFM 60

Query: 61  RFAWMVQPRNYLLLACHASNETVQLYQLSRWARANGYLSQKKDEDTSSQ 110
           RFAWMVQPRNYLLLACHASNETVQLYQLSRWARANGYLSQKKDEDTSSQ
Sbjct: 61  RFAWMVQPRNYLLLACHASNETVQLYQLSRWARANGYLSQKKDEDTSSQ 109

[Close]

BLAST of Spo25425.1 vs. NCBI nr
Match: gi|731350906|ref|XP_010686753.1| (PREDICTED: mitochondrial pyruvate carrier 1 [Beta vulgaris subsp. vulgaris])

HSP 1 Score: 214.9 bits (546), Expect = 6.900e-53
Identity = 102/109 (93.58%), Postives = 104/109 (95.41%), Query Frame = 1


		  
Query: 1   MASTFRAFLNSPVGPKTTHFWGPVANWGFVAAGLVDMNKPPEKISGNMSAAMCVYSGLFM 60
           MASTFRAFLNSPVGPKTTHFWGPVANWGFVAAGLVDMNKPPE ISGNM+ AMCVYS LFM
Sbjct: 1   MASTFRAFLNSPVGPKTTHFWGPVANWGFVAAGLVDMNKPPEMISGNMTGAMCVYSALFM 60

Query: 61  RFAWMVQPRNYLLLACHASNETVQLYQLSRWARANGYLSQKKDEDTSSQ 110
           RFAWMVQPRNYLLLACHASNETVQLYQLSR ARANGYLSQKK+EDT SQ
Sbjct: 61  RFAWMVQPRNYLLLACHASNETVQLYQLSRVARANGYLSQKKEEDTPSQ 109

[Close]

BLAST of Spo25425.1 vs. NCBI nr
Match: gi|902198345|gb|KNA13640.1| (hypothetical protein SOVF_114800 [Spinacia oleracea])

HSP 1 Score: 214.2 bits (544), Expect = 1.200e-52
Identity = 99/107 (92.52%), Postives = 102/107 (95.33%), Query Frame = 1


		  
Query: 1   MASTFRAFLNSPVGPKTTHFWGPVANWGFVAAGLVDMNKPPEKISGNMSAAMCVYSGLFM 60
           MASTFRAF NSPVGPKTTHFWGPVANWGFVAAGLVDMNKPPEKISGNM+AAMCVYS LFM
Sbjct: 1   MASTFRAFFNSPVGPKTTHFWGPVANWGFVAAGLVDMNKPPEKISGNMTAAMCVYSALFM 60

Query: 61  RFAWMVQPRNYLLLACHASNETVQLYQLSRWARANGYLSQKKDEDTS 108
           RFAWMVQPRNYLLLACHASNETVQLYQ SRWARANGYLS KK+E T+
Sbjct: 61  RFAWMVQPRNYLLLACHASNETVQLYQFSRWARANGYLSPKKEESTT 107

[Close]

BLAST of Spo25425.1 vs. NCBI nr
Match: gi|823179844|ref|XP_012487626.1| (PREDICTED: mitochondrial pyruvate carrier 1-like [Gossypium raimondii])

HSP 1 Score: 208.4 bits (529), Expect = 6.400e-51
Identity = 96/106 (90.57%), Postives = 101/106 (95.28%), Query Frame = 1


		  
Query: 1   MASTFRAFLNSPVGPKTTHFWGPVANWGFVAAGLVDMNKPPEKISGNMSAAMCVYSGLFM 60
           MAS+FRAFLNSPVGPKTTHFWGPVANWGFV AGLVDMNKPPE ISGNM++AMCVYS LFM
Sbjct: 1   MASSFRAFLNSPVGPKTTHFWGPVANWGFVLAGLVDMNKPPEMISGNMTSAMCVYSALFM 60

Query: 61  RFAWMVQPRNYLLLACHASNETVQLYQLSRWARANGYLSQKKDEDT 107
           RFAWMVQPRNYLLLACHASNETVQLYQLSRWARA GYLS+KKD+ T
Sbjct: 61  RFAWMVQPRNYLLLACHASNETVQLYQLSRWARAQGYLSEKKDKAT 106

[Close]

BLAST of Spo25425.1 vs. NCBI nr
Match: gi|823121772|ref|XP_012468335.1| (PREDICTED: mitochondrial pyruvate carrier 1 [Gossypium raimondii])

HSP 1 Score: 208.0 bits (528), Expect = 8.400e-51
Identity = 96/107 (89.72%), Postives = 102/107 (95.33%), Query Frame = 1


		  
Query: 1   MASTFRAFLNSPVGPKTTHFWGPVANWGFVAAGLVDMNKPPEKISGNMSAAMCVYSGLFM 60
           MAS+FRAFLNSPVGPKTTHFWGPVANWGFV AGLVDMNKPPE ISGNM++AMCVYS LFM
Sbjct: 1   MASSFRAFLNSPVGPKTTHFWGPVANWGFVLAGLVDMNKPPEMISGNMTSAMCVYSALFM 60

Query: 61  RFAWMVQPRNYLLLACHASNETVQLYQLSRWARANGYLSQKKDEDTS 108
           RFAWMVQPRNYLLLACHASNETVQLYQLSRWARA GYLS+KK+E +S
Sbjct: 61  RFAWMVQPRNYLLLACHASNETVQLYQLSRWARAQGYLSEKKEEASS 107

[Close]

BLAST of Spo25425.1 vs. UniProtKB/TrEMBL
Match: A0A0K9S224_SPIOL (Uncharacterized protein OS=Spinacia oleracea GN=SOVF_003510 PE=4 SV=1)

HSP 1 Score: 231.1 bits (588), Expect = 6.400e-58
Identity = 109/109 (100.00%), Postives = 109/109 (100.00%), Query Frame = 1


		  
Query: 1   MASTFRAFLNSPVGPKTTHFWGPVANWGFVAAGLVDMNKPPEKISGNMSAAMCVYSGLFM 60
           MASTFRAFLNSPVGPKTTHFWGPVANWGFVAAGLVDMNKPPEKISGNMSAAMCVYSGLFM
Sbjct: 1   MASTFRAFLNSPVGPKTTHFWGPVANWGFVAAGLVDMNKPPEKISGNMSAAMCVYSGLFM 60

Query: 61  RFAWMVQPRNYLLLACHASNETVQLYQLSRWARANGYLSQKKDEDTSSQ 110
           RFAWMVQPRNYLLLACHASNETVQLYQLSRWARANGYLSQKKDEDTSSQ
Sbjct: 61  RFAWMVQPRNYLLLACHASNETVQLYQLSRWARANGYLSQKKDEDTSSQ 109

[Close]

BLAST of Spo25425.1 vs. UniProtKB/TrEMBL
Match: A0A0J8BVY2_BETVU (Uncharacterized protein OS=Beta vulgaris subsp. vulgaris GN=BVRB_8g185220 PE=4 SV=1)

HSP 1 Score: 214.9 bits (546), Expect = 4.800e-53
Identity = 102/109 (93.58%), Postives = 104/109 (95.41%), Query Frame = 1


		  
Query: 1   MASTFRAFLNSPVGPKTTHFWGPVANWGFVAAGLVDMNKPPEKISGNMSAAMCVYSGLFM 60
           MASTFRAFLNSPVGPKTTHFWGPVANWGFVAAGLVDMNKPPE ISGNM+ AMCVYS LFM
Sbjct: 1   MASTFRAFLNSPVGPKTTHFWGPVANWGFVAAGLVDMNKPPEMISGNMTGAMCVYSALFM 60

Query: 61  RFAWMVQPRNYLLLACHASNETVQLYQLSRWARANGYLSQKKDEDTSSQ 110
           RFAWMVQPRNYLLLACHASNETVQLYQLSR ARANGYLSQKK+EDT SQ
Sbjct: 61  RFAWMVQPRNYLLLACHASNETVQLYQLSRVARANGYLSQKKEEDTPSQ 109

[Close]

BLAST of Spo25425.1 vs. UniProtKB/TrEMBL
Match: A0A0K9R2C0_SPIOL (Uncharacterized protein OS=Spinacia oleracea GN=SOVF_114800 PE=4 SV=1)

HSP 1 Score: 214.2 bits (544), Expect = 8.100e-53
Identity = 99/107 (92.52%), Postives = 102/107 (95.33%), Query Frame = 1


		  
Query: 1   MASTFRAFLNSPVGPKTTHFWGPVANWGFVAAGLVDMNKPPEKISGNMSAAMCVYSGLFM 60
           MASTFRAF NSPVGPKTTHFWGPVANWGFVAAGLVDMNKPPEKISGNM+AAMCVYS LFM
Sbjct: 1   MASTFRAFFNSPVGPKTTHFWGPVANWGFVAAGLVDMNKPPEKISGNMTAAMCVYSALFM 60

Query: 61  RFAWMVQPRNYLLLACHASNETVQLYQLSRWARANGYLSQKKDEDTS 108
           RFAWMVQPRNYLLLACHASNETVQLYQ SRWARANGYLS KK+E T+
Sbjct: 61  RFAWMVQPRNYLLLACHASNETVQLYQFSRWARANGYLSPKKEESTT 107

[Close]

BLAST of Spo25425.1 vs. UniProtKB/TrEMBL
Match: A0A0D2QHL7_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_006G271400 PE=4 SV=1)

HSP 1 Score: 208.4 bits (529), Expect = 4.500e-51
Identity = 96/106 (90.57%), Postives = 101/106 (95.28%), Query Frame = 1


		  
Query: 1   MASTFRAFLNSPVGPKTTHFWGPVANWGFVAAGLVDMNKPPEKISGNMSAAMCVYSGLFM 60
           MAS+FRAFLNSPVGPKTTHFWGPVANWGFV AGLVDMNKPPE ISGNM++AMCVYS LFM
Sbjct: 1   MASSFRAFLNSPVGPKTTHFWGPVANWGFVLAGLVDMNKPPEMISGNMTSAMCVYSALFM 60

Query: 61  RFAWMVQPRNYLLLACHASNETVQLYQLSRWARANGYLSQKKDEDT 107
           RFAWMVQPRNYLLLACHASNETVQLYQLSRWARA GYLS+KKD+ T
Sbjct: 61  RFAWMVQPRNYLLLACHASNETVQLYQLSRWARAQGYLSEKKDKAT 106

[Close]

BLAST of Spo25425.1 vs. UniProtKB/TrEMBL
Match: A0A0D2PMF2_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_001G060500 PE=4 SV=1)

HSP 1 Score: 208.0 bits (528), Expect = 5.800e-51
Identity = 96/107 (89.72%), Postives = 102/107 (95.33%), Query Frame = 1


		  
Query: 1   MASTFRAFLNSPVGPKTTHFWGPVANWGFVAAGLVDMNKPPEKISGNMSAAMCVYSGLFM 60
           MAS+FRAFLNSPVGPKTTHFWGPVANWGFV AGLVDMNKPPE ISGNM++AMCVYS LFM
Sbjct: 1   MASSFRAFLNSPVGPKTTHFWGPVANWGFVLAGLVDMNKPPEMISGNMTSAMCVYSALFM 60

Query: 61  RFAWMVQPRNYLLLACHASNETVQLYQLSRWARANGYLSQKKDEDTS 108
           RFAWMVQPRNYLLLACHASNETVQLYQLSRWARA GYLS+KK+E +S
Sbjct: 61  RFAWMVQPRNYLLLACHASNETVQLYQLSRWARAQGYLSEKKEEASS 107

[Close]

BLAST of Spo25425.1 vs. ExPASy Swiss-Prot
Match: MPC1_ARATH (Mitochondrial pyruvate carrier 1 OS=Arabidopsis thaliana GN=MPC1 PE=3 SV=1)

HSP 1 Score: 203.4 bits (516), Expect = 1.300e-51
Identity = 93/107 (86.92%), Postives = 99/107 (92.52%), Query Frame = 1


		  
Query: 3   STFRAFLNSPVGPKTTHFWGPVANWGFVAAGLVDMNKPPEKISGNMSAAMCVYSGLFMRF 62
           S F+AFLNSP+GPKTTHFWGP+ANWGFVAAGLVDM KPPE ISGNMS+AMCVYS LFMRF
Sbjct: 4   SRFQAFLNSPIGPKTTHFWGPIANWGFVAAGLVDMQKPPEMISGNMSSAMCVYSALFMRF 63

Query: 63  AWMVQPRNYLLLACHASNETVQLYQLSRWARANGYLSQKKDEDTSSQ 110
           AWMVQPRNYLLLACHASNETVQLYQLSRWARA GYLS KK+E+  SQ
Sbjct: 64  AWMVQPRNYLLLACHASNETVQLYQLSRWARAQGYLSSKKEEEKPSQ 110

[Close]

BLAST of Spo25425.1 vs. ExPASy Swiss-Prot
Match: MPC1_BOVIN (Mitochondrial pyruvate carrier 1 OS=Bos taurus GN=MPC1 PE=1 SV=1)

HSP 1 Score: 103.2 bits (256), Expect = 1.800e-21
Identity = 48/77 (62.34%), Postives = 55/77 (71.43%), Query Frame = 1


		  
Query: 17  TTHFWGPVANWGFVAAGLVDMNKPPEKISGNMSAAMCVYSGLFMRFAWMVQPRNYLLLAC 76
           +THFWGPVANWG   A + DM K PE ISG M+ A+C YS  FMRFA+ VQPRN+LL AC
Sbjct: 24  STHFWGPVANWGLPIAAINDMKKSPEIISGRMTFALCCYSLTFMRFAYKVQPRNWLLFAC 83

Query: 77  HASNETVQLYQLSRWAR 94
           HA+NE  QL Q  R  R
Sbjct: 84  HATNEVAQLIQGGRLIR 100

[Close]

BLAST of Spo25425.1 vs. ExPASy Swiss-Prot
Match: MPC1_HUMAN (Mitochondrial pyruvate carrier 1 OS=Homo sapiens GN=MPC1 PE=1 SV=1)

HSP 1 Score: 102.4 bits (254), Expect = 3.100e-21
Identity = 47/74 (63.51%), Postives = 54/74 (72.97%), Query Frame = 1


		  
Query: 17 TTHFWGPVANWGFVAAGLVDMNKPPEKISGNMSAAMCVYSGLFMRFAWMVQPRNYLLLAC 76
          +THFWGPVANWG   A + DM K PE ISG M+ A+C YS  FMRFA+ VQPRN+LL AC
Sbjct: 24 STHFWGPVANWGLPIAAINDMKKSPEIISGRMTFALCCYSLTFMRFAYKVQPRNWLLFAC 83

Query: 77 HASNETVQLYQLSR 91
          HA+NE  QL Q  R
Sbjct: 84 HATNEVAQLIQGGR 97

[Close]

BLAST of Spo25425.1 vs. ExPASy Swiss-Prot
Match: MPC1_MOUSE (Mitochondrial pyruvate carrier 1 OS=Mus musculus GN=Mpc1 PE=1 SV=1)

HSP 1 Score: 100.9 bits (250), Expect = 9.000e-21
Identity = 46/74 (62.16%), Postives = 53/74 (71.62%), Query Frame = 1


		  
Query: 17 TTHFWGPVANWGFVAAGLVDMNKPPEKISGNMSAAMCVYSGLFMRFAWMVQPRNYLLLAC 76
          +THFWGPVANWG   A + DM K PE ISG M+ A+C YS  FMRFA+ VQPRN+LL AC
Sbjct: 24 STHFWGPVANWGLPIAAINDMKKSPEIISGRMTFALCCYSLTFMRFAYKVQPRNWLLFAC 83

Query: 77 HASNETVQLYQLSR 91
          H +NE  QL Q  R
Sbjct: 84 HVTNEVAQLIQGGR 97

[Close]

BLAST of Spo25425.1 vs. ExPASy Swiss-Prot
Match: MPC1_RAT (Mitochondrial pyruvate carrier 1 OS=Rattus norvegicus GN=Mpc1 PE=3 SV=1)

HSP 1 Score: 100.9 bits (250), Expect = 9.000e-21
Identity = 46/74 (62.16%), Postives = 53/74 (71.62%), Query Frame = 1


		  
Query: 17 TTHFWGPVANWGFVAAGLVDMNKPPEKISGNMSAAMCVYSGLFMRFAWMVQPRNYLLLAC 76
          +THFWGPVANWG   A + DM K PE ISG M+ A+C YS  FMRFA+ VQPRN+LL AC
Sbjct: 24 STHFWGPVANWGLPIAAINDMKKSPEIISGRMTFALCCYSLTFMRFAYKVQPRNWLLFAC 83

Query: 77 HASNETVQLYQLSR 91
          H +NE  QL Q  R
Sbjct: 84 HVTNEVAQLIQGGR 97

[Close]

BLAST of Spo25425.1 vs. TAIR (Arabidopsis)
Match: AT5G20090.1 (Uncharacterised protein family (UPF0041))

HSP 1 Score: 203.4 bits (516), Expect = 7.300e-53
Identity = 93/107 (86.92%), Postives = 99/107 (92.52%), Query Frame = 1


		  
Query: 3   STFRAFLNSPVGPKTTHFWGPVANWGFVAAGLVDMNKPPEKISGNMSAAMCVYSGLFMRF 62
           S F+AFLNSP+GPKTTHFWGP+ANWGFVAAGLVDM KPPE ISGNMS+AMCVYS LFMRF
Sbjct: 4   SRFQAFLNSPIGPKTTHFWGPIANWGFVAAGLVDMQKPPEMISGNMSSAMCVYSALFMRF 63

Query: 63  AWMVQPRNYLLLACHASNETVQLYQLSRWARANGYLSQKKDEDTSSQ 110
           AWMVQPRNYLLLACHASNETVQLYQLSRWARA GYLS KK+E+  SQ
Sbjct: 64  AWMVQPRNYLLLACHASNETVQLYQLSRWARAQGYLSSKKEEEKPSQ 110

[Close]

BLAST of Spo25425.1 vs. TAIR (Arabidopsis)
Match: AT4G14695.1 (Uncharacterised protein family (UPF0041))

HSP 1 Score: 70.1 bits (170), Expect = 9.600e-13
Identity = 31/88 (35.23%), Postives = 46/88 (52.27%), Query Frame = 1


		  
Query: 3  STFRAFLNSPVGPKTTHFWGPVANWGFVAAGLVDMNKPPEKISGNMSAAMCVYSGLFMRF 62
          S  +A  N P GPKT HFW P   WG   A + D  KPPE IS     A+     ++ R 
Sbjct: 4  SKLQALWNHPAGPKTIHFWAPTFKWGISIANIADFQKPPENISYLQQIAVTCTGMIWCRC 63

Query: 63 AWMVQPRNYLLLACHASNETVQLYQLSR 91
          + ++ P+N+ L + + +     +YQL+R
Sbjct: 64 STIITPKNWNLFSVNVAMAATGIYQLTR 91

[Close]

BLAST of Spo25425.1 vs. TAIR (Arabidopsis)
Match: AT4G05590.2 (Uncharacterised protein family UPF0041 (InterPro:IPR005336))

HSP 1 Score: 55.5 bits (132), Expect = 2.500e-8
Identity = 23/56 (41.07%), Postives = 28/56 (50.00%), Query Frame = 1


		  
Query: 3  STFRAFLNSPVGPKTTHFWGPVANWGFVAAGLVDMNKPPEKISGNMSAAMCVYSGL 59
          S  +A  N P GPKT HFW P   WG   A + D  KPPE +S      + +  GL
Sbjct: 4  SKLQALWNHPAGPKTIHFWAPTFKWGISIANIADFQKPPETLSYPQQIGIILTIGL 59

The following BLAST results are available for this feature:

BLAST of Spo25425.1 vs. NCBI nr
BLAST of Spo25425.1 vs. UniProtKB/TrEMBL
BLAST of Spo25425.1 vs. ExPASy Swiss-Prot
BLAST of Spo25425.1 vs. TAIR (Arabidopsis)

BLAST of Spo25425.1 vs. NCBI nr
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. NCBI nr)
Total hits: 5


Match Name	E-value	Identity	Description
gi\|902239928\|gb\|KNA25800.1\|	9.2e-58	100.	hypothetical protein SOVF_0035...	[more]
gi\|731350906\|ref\|XP_010686753.1\|	6.9e-53	93.5	PREDICTED: mitochondrial pyruv...	[more]
gi\|902198345\|gb\|KNA13640.1\|	1.2e-52	92.5	hypothetical protein SOVF_1148...	[more]
gi\|823179844\|ref\|XP_012487626.1\|	6.4e-51	90.5	PREDICTED: mitochondrial pyruv...	[more]
gi\|823121772\|ref\|XP_012468335.1\|	8.4e-51	89.7	PREDICTED: mitochondrial pyruv...	[more]

BLAST of Spo25425.1 vs. UniProtKB/TrEMBL
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. UniprotKB/TrEMBL)
Total hits: 5


Match Name	E-value	Identity	Description
A0A0K9S224_SPIOL	6.4e-58	100.	Uncharacterized protein OS=Spi...	[more]
A0A0J8BVY2_BETVU	4.8e-53	93.5	Uncharacterized protein OS=Bet...	[more]
A0A0K9R2C0_SPIOL	8.1e-53	92.5	Uncharacterized protein OS=Spi...	[more]
A0A0D2QHL7_GOSRA	4.5e-51	90.5	Uncharacterized protein OS=Gos...	[more]
A0A0D2PMF2_GOSRA	5.8e-51	89.7	Uncharacterized protein OS=Gos...	[more]

BLAST of Spo25425.1 vs. ExPASy Swiss-Prot
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. ExPASy SwissProt)
Total hits: 5


Match Name	E-value	Identity	Description
MPC1_ARATH	1.3e-51	86.9	Mitochondrial pyruvate carrier...	[more]
MPC1_BOVIN	1.8e-21	62.3	Mitochondrial pyruvate carrier...	[more]
MPC1_HUMAN	3.1e-21	63.5	Mitochondrial pyruvate carrier...	[more]
MPC1_MOUSE	9.0e-21	62.1	Mitochondrial pyruvate carrier...	[more]
MPC1_RAT	9.0e-21	62.1	Mitochondrial pyruvate carrier...	[more]

BLAST of Spo25425.1 vs. TAIR (Arabidopsis)
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. TAIR)
Total hits: 3


Match Name	E-value	Identity	Description
AT5G20090.1	7.3e-53	86.9	Uncharacterised protein family...	[more]
AT4G14695.1	9.6e-13	35.2	Uncharacterised protein family...	[more]
AT4G05590.2	2.5e-8	41.0	Uncharacterised protein family...	[more]

InterPro

Analysis Name: InterPro Annotations of S. oleracea
Date Performed: 2018-06-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR005336	Mitochondrial pyruvate carrier	PFAM	PF03650	MPC	coord: 5..103 score: 1.5
None	No IPR available	PANTHER	PTHR14154	UPF0041 BRAIN PROTEIN 44-RELATED	coord: 1..105 score: 1.6
None	No IPR available	PANTHER	PTHR14154:SF16	SUBFAMILY NOT NAMED	coord: 1..105 score: 1.6

GO Annotation

GO Assignments

This mRNA is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006850	mitochondrial pyruvate transmembrane transport
biological_process	GO:0009060	aerobic respiration
biological_process	GO:0006096	glycolytic process
biological_process	GO:0006301	postreplication repair
biological_process	GO:0046686	response to cadmium ion
cellular_component	GO:0005743	mitochondrial inner membrane
cellular_component	GO:0009507	chloroplast
cellular_component	GO:0005886	plasma membrane
cellular_component	GO:0005774	vacuolar membrane