Spo21082.1 (mRNA)

Overview
NameSpo21082.1
TypemRNA
OrganismSpinacia oleracea (Spinach)
DescriptionEukaryotic translation initiation factor 5A-1
LocationSpoScf_02625 : 12806 .. 16645 (+)
Sequence length1092
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGATTGTGCATAATCGTCGCTGCTTACCGGGTTTAGAAATGTGTGGAGGTTCTGTTGCTGCTTACAATTAGCGGCGGCGCAGAGGAAGGGAAGAAGAGGGCGACACTTGAACTTTGGCCGGTAAAAATAGCTGGATAAAGGGGGAGGGGTGAAGGGGGACGATGAAGAGGAGGGAGGCTTATTTTCGTACAAAGGGTAAAGTCGTTATTTCATCATTAAATACACGGGCGTTTATGCGAAATAGGACGTCGATTAAAAATCCCAAATTTTTTTAAAGTGCAAATAATATTTTGTTTTTCAGTGTCTAAAATTTTCCAATTTGAGATTTATTTTTTGCAAGAGTGGCAATAGTCAAAAACCGTGTCACGCATAGTTTCCCCAAACGAGCACAATGTGTCAAGGTACACCATACTTATACTTGTAAAAGAAAAACAACCTTTATAAAAAAAAGTTCCCCGAAATAGAAAGCTGTCAATCCAACAAATTCCGCAGTGAGACGATCCCAAATATAAAGCTACACTCTCCTGCTTACATTTCACGCAGACGGCGCACCACCTCTTCCCTCTCCATTTTCATTGCATTAGGTTTTCTCAACTTTCTCTCTCCTCGATTCGTAGCTGGTGAAGAACACGAAGAAGCCATAACCATGTCTGACGAAGAGCACCAGTTCGAATCCAAGGCTGACGCCGGTGCGTCCAAGACTTTCCCTCAGCAAGCTGGTACTATCCGTAAGAACGGTTACATCGTCATCAAGAATCGCCCCTGCAAGGTATAACCTCCATTTTATTTATGCTTTTTTGGGTTGGATTACTGTTCGATTTCTCTGCTTTTTGTTAGGGATTTCACTTGAAGCATGAAATTTAATCATTTTACTGCGTTTTTAGCTCGGGTTTTGGGTGTTTTAGCTCGGATTTTAGAGTTTTTAGCACGAAATTTTATCATTCCCTTCATTTATGTTGCGTTTCGCCCTTTCTTTGGTGTTATTTTTAGTCGTATTTCTGTTTGATATTTATGATAACATGTTGGGATTTCATTTGGTAATAGTATGAAATGGGATTTTACTGCATCATTTTGGTTTCGTACCGTGGTTAGTTCGGGTTTTAATGAGATACTTTTTGACGATTTCCTTCAATTTAAGATGCGTTTCGCCCTTGTAGTGGTGTTCTTTGTTCATATTTCTGTTTGATAATCTAAAATGAAAATCGGGTTTTAGCATTTCAGTGTGTTATTTTAGTTTCGTACTGACCGTTGCCAGGGTTTTTCTTCAATGAAATTGTTTTGCACTACAAATCACTTGCCTATTACTGTTTCTATGATTGTAATGGAGTTTTCTGTTGCTTGAATCTGTGAATTCCACTAAATTATTGGTCAGCCGGATATTCTATGTTGCTGGATAGGATGTTTTTCTCCGATAGGATTTTCGTCATATTTTGGGGATTTATTCATTTGAATATGGTGTTTACTTTTTCCTGATTACAAATGATGTTGGTGAACATGTGGGAGATATAAAGCGTGAAATATATTAGTTATTCTGTGAATAAATCTGTTATTGGAATTTTCTGTTGATTGGAAATAGTTGCACCTTAAATTGTCTTTGTAATACGATATTGGTATCTTAGACAGAGTTGTTGCAAAGTCTTTCGATGATACTGTCAACTGTGTGCTGTGGTTTTCGTGCCGGTGATACTTGTTAATACTCTGTAAATTGTTTGAGCTGGTCTTGATAAGCAAATGTGAATGAATTGTTTGAGCTGTTCTGTATGTGTTTCATTTTAGGTAGTACAATCTAATGGTCCTGGTTATGCTGAAGTGAATAGTATAAGTTGTTTGGGGAGGTAAGGGTTGTCATTATTTTGGTTGTTTATTTAGTCATTGGAAGGTGGAGTTTCTCATGGTTTCTTGTAAAGGCCTTGAGGTTCTTGTATTCCAAGTCTCTTTTGGCGTTGTCGGGAAAAGAAGTTTTAGATAAATTGAAGTTTATAATTGCGATTAGCACTTGAAGAAGGCAGAATGCTCACTGACATGAAAATACTCACAAATCTATTTTTGTTATGGCAGGTTGTTGAAGTTTCCACTTCTAAGACCGGCAAGCACGGCCATGCCAAATGTAACTTTGTTGGTATTGATATCTTCAATGGGAAGAAGCTCGAGGATATTGTTCCATCTTCTCACAATTCTGATGTATGGCCCTACTGTAATCTCTTCATTTTCTGTCTTATTTCTTCTTTGTCCGGTCCTTTCTTTGAACTTTATAGAATTTTCCATTGTTTTGCAGGTTCCCCATGTCACTCGTACTGATTACCAGCTCCTTGACATAACTGAGGATGGCTTTGTAAGTATAGCAGCATCCAATGTGGTTTTGTTAGGTTTGGTCTTTCAATATTGTGGTTGTCTGTTATCTAACCCGAAAGTATTTCAGGTTAGCCTGCTGACTGACAATGGAGACACTAAGGATGACTTGAGGCTGCCAACTGATGATGCTCTGCTGAAACAGGTATTTACCTACAGTACGCCGCTACTTTCCTTAATTGCTTTGTCATTGACTCCCTGGTTTATGTTATTTAAGTCATCTAAAATTTTTATTATCTTAAAATCCTTTATTCCTCACCAGTAGGTTTGGGAGTATATACTCCACATACATGCATGGTTTCACTGATTACAGTTCTTGGAACTTGTTTAATACCGTATACACATAGAACTTTAAGGTATTTGTGTGTATCAATTGCTTGTTGAAATCAAACCTGATACTGGGCTAGTAGCTGCCATTAAAAATTGAAGGATTATCAACAAATTTTTGTAAATGTCAAGGAACATTATCTTGTTTTAGAATCTTTGCTATTCTTAAAAAAATTGAAGGATTATCATCAATTTTTTCGTAAATGTCAAGGAACATATTATTGTTTTAGAAATCTTTGCTATAGTTTATTGGGTGTTTGAGGGGTTTGTTTGATGCTAAAAGGAGTGCTATGTCCTGTGACTTTGGACGGTAGAGAGTGTTTGTGGCGACATGCTCAGTATTAAGGAACAGGAGTACAAGTGTACATGACTCTTGTTTTAAAAAATCTTTGCTGTTTTTCCCTGTGAGGGGGATTTGTTGTGAAACTAAATGGATTGCTACTTCCTGTGACCTGGGACGTAGATTGTTTTTGGCAATATACTCATATAACTCACAATTTACATGCTATTTAAATTCCATGGCAAGCTCATCATCAAGTTTTGTGGCATTGATTCTTGAATTCATGTATGAGTTTGGAAGACGCACTGTTTATAATTTGATCATCCCCTTTATATTTTCTTCTGAAATTTCCCATAGAAAAGGCAGCTACTAATACCTTGCATTGCTGTATGTACAACAGCTTAAGGACGGGTTTGCCGAGGGGAAAGACCTGATTGTGAGTGTGCAGTGTGCCATGGGAGAGGAACAGATCTGCGGTCTCAAGGATATTGGACCCAAGTAGATGATTTCTGATCGGTTCAAGTTGGCTCTCTAGGCATTAAAACATTACTATGACTAGCTTTACTGAGATTTCATGTGTTTAAGAATGTGTTGGAAAAAGACCTCTGTGATAGGGCCTCTGGTGTTTAGCTCCTGTTTATGTTGACTCTTGATCATCATCAAAATGTTAGGTGCTGTTGTTTCTGCTAAATGATGTATTGGTGCTGTTATACCATACGTAATATTGTGCGATTCCCGAATTGGCTTGTTCTCATTTTCCAGTCTAGTTGATTGCCATCTTTTGATTCAAATAATAGGAGTTTAGATTTACGGCATGAGTTTACCCAAAGACTGACCCAAGTATTTGAAAAATTTCTCTCTTTCTCATACTAGTATAAGCCAA

mRNA sequence

ATGATTGTGCATAATCGTCGCTGCTTACCGGGTTTAGAAATGTGTGGAGAAAGCTGTCAATCCAACAAATTCCGCAGTGAGACGATCCCAAATATAAAGCTACACTCTCCTGCTTACATTTCACGCAGACGGCGCACCACCTCTTCCCTCTCCATTTTCATTGCATTAGGTTTTCTCAACTTTCTCTCTCCTCGATTCGTAGCTGGTGAAGAACACGAAGAAGCCATAACCATGTCTGACGAAGAGCACCAGTTCGAATCCAAGGCTGACGCCGGTGCGTCCAAGACTTTCCCTCAGCAAGCTGGTACTATCCGTAAGAACGGTTACATCGTCATCAAGAATCGCCCCTGCAAGGTTGTTGAAGTTTCCACTTCTAAGACCGGCAAGCACGGCCATGCCAAATGTAACTTTGTTGGTATTGATATCTTCAATGGGAAGAAGCTCGAGGATATTGTTCCATCTTCTCACAATTCTGATGTTCCCCATGTCACTCGTACTGATTACCAGCTCCTTGACATAACTGAGGATGGCTTTGTTAGCCTGCTGACTGACAATGGAGACACTAAGGATGACTTGAGGCTGCCAACTGATGATGCTCTGCTGAAACAGCTTAAGGACGGGTTTGCCGAGGGGAAAGACCTGATTGTGAGTGTGCAGTGTGCCATGGGAGAGGAACAGATCTGCGGTCTCAAGGATATTGGACCCAAGTAGATGATTTCTGATCGGTTCAAGTTGGCTCTCTAGGCATTAAAACATTACTATGACTAGCTTTACTGAGATTTCATGTGTTTAAGAATGTGTTGGAAAAAGACCTCTGTGATAGGGCCTCTGGTGTTTAGCTCCTGTTTATGTTGACTCTTGATCATCATCAAAATGTTAGGTGCTGTTGTTTCTGCTAAATGATGTATTGGTGCTGTTATACCATACGTAATATTGTGCGATTCCCGAATTGGCTTGTTCTCATTTTCCAGTCTAGTTGATTGCCATCTTTTGATTCAAATAATAGGAGTTTAGATTTACGGCATGAGTTTACCCAAAGACTGACCCAAGTATTTGAAAAATTTCTCTCTTTCTCATACTAGTATAAGCCAA

Coding sequence (CDS)

ATGATTGTGCATAATCGTCGCTGCTTACCGGGTTTAGAAATGTGTGGAGAAAGCTGTCAATCCAACAAATTCCGCAGTGAGACGATCCCAAATATAAAGCTACACTCTCCTGCTTACATTTCACGCAGACGGCGCACCACCTCTTCCCTCTCCATTTTCATTGCATTAGGTTTTCTCAACTTTCTCTCTCCTCGATTCGTAGCTGGTGAAGAACACGAAGAAGCCATAACCATGTCTGACGAAGAGCACCAGTTCGAATCCAAGGCTGACGCCGGTGCGTCCAAGACTTTCCCTCAGCAAGCTGGTACTATCCGTAAGAACGGTTACATCGTCATCAAGAATCGCCCCTGCAAGGTTGTTGAAGTTTCCACTTCTAAGACCGGCAAGCACGGCCATGCCAAATGTAACTTTGTTGGTATTGATATCTTCAATGGGAAGAAGCTCGAGGATATTGTTCCATCTTCTCACAATTCTGATGTTCCCCATGTCACTCGTACTGATTACCAGCTCCTTGACATAACTGAGGATGGCTTTGTTAGCCTGCTGACTGACAATGGAGACACTAAGGATGACTTGAGGCTGCCAACTGATGATGCTCTGCTGAAACAGCTTAAGGACGGGTTTGCCGAGGGGAAAGACCTGATTGTGAGTGTGCAGTGTGCCATGGGAGAGGAACAGATCTGCGGTCTCAAGGATATTGGACCCAAGTAG

Protein sequence

MIVHNRRCLPGLEMCGESCQSNKFRSETIPNIKLHSPAYISRRRRTTSSLSIFIALGFLNFLSPRFVAGEEHEEAITMSDEEHQFESKADAGASKTFPQQAGTIRKNGYIVIKNRPCKVVEVSTSKTGKHGHAKCNFVGIDIFNGKKLEDIVPSSHNSDVPHVTRTDYQLLDITEDGFVSLLTDNGDTKDDLRLPTDDALLKQLKDGFAEGKDLIVSVQCAMGEEQICGLKDIGPK
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameType
Spo21082Spo21082gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameType
Spo21082.1Spo21082.1-proteinpolypeptide


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameType
Spo21082.1.exon.1Spo21082.1.exon.1exon
Spo21082.1.exon.2Spo21082.1.exon.2exon
Spo21082.1.exon.3Spo21082.1.exon.3exon
Spo21082.1.exon.4Spo21082.1.exon.4exon
Spo21082.1.exon.5Spo21082.1.exon.5exon
Spo21082.1.exon.6Spo21082.1.exon.6exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameType
Spo21082.1.CDS.1Spo21082.1.CDS.1CDS
Spo21082.1.CDS.2Spo21082.1.CDS.2CDS
Spo21082.1.CDS.3Spo21082.1.CDS.3CDS
Spo21082.1.CDS.4Spo21082.1.CDS.4CDS
Spo21082.1.CDS.5Spo21082.1.CDS.5CDS
Spo21082.1.CDS.6Spo21082.1.CDS.6CDS


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameType
Spo21082.1.utr3p.1Spo21082.1.utr3p.1three_prime_UTR


Homology
[Close]
BLAST of Spo21082.1 vs. NCBI nr
Match: gi|902202628|gb|KNA14317.1| (hypothetical protein SOVF_108510 [Spinacia oleracea])

HSP 1 Score: 325.9 bits (834), Expect = 6.000e-86
Identity = 159/159 (100.00%), Postives = 159/159 (100.00%), Query Frame = 1 

		  

Query: 78  MSDEEHQFESKADAGASKTFPQQAGTIRKNGYIVIKNRPCKVVEVSTSKTGKHGHAKCNF 137
           MSDEEHQFESKADAGASKTFPQQAGTIRKNGYIVIKNRPCKVVEVSTSKTGKHGHAKCNF
Sbjct: 1   MSDEEHQFESKADAGASKTFPQQAGTIRKNGYIVIKNRPCKVVEVSTSKTGKHGHAKCNF 60

Query: 138 VGIDIFNGKKLEDIVPSSHNSDVPHVTRTDYQLLDITEDGFVSLLTDNGDTKDDLRLPTD 197
           VGIDIFNGKKLEDIVPSSHNSDVPHVTRTDYQLLDITEDGFVSLLTDNGDTKDDLRLPTD
Sbjct: 61  VGIDIFNGKKLEDIVPSSHNSDVPHVTRTDYQLLDITEDGFVSLLTDNGDTKDDLRLPTD 120

Query: 198 DALLKQLKDGFAEGKDLIVSVQCAMGEEQICGLKDIGPK 237
           DALLKQLKDGFAEGKDLIVSVQCAMGEEQICGLKDIGPK
Sbjct: 121 DALLKQLKDGFAEGKDLIVSVQCAMGEEQICGLKDIGPK 159
[Close]
BLAST of Spo21082.1 vs. NCBI nr
Match: gi|731343827|ref|XP_010683086.1| (PREDICTED: eukaryotic translation initiation factor 5A [Beta vulgaris subsp. vulgaris])

HSP 1 Score: 308.1 bits (788), Expect = 1.300e-80
Identity = 150/159 (94.34%), Postives = 155/159 (97.48%), Query Frame = 1 

		  

Query: 78  MSDEEHQFESKADAGASKTFPQQAGTIRKNGYIVIKNRPCKVVEVSTSKTGKHGHAKCNF 137
           MSDEEHQFESKADAGASKTFPQQAGTIRKNGYIVIKNRPCKVVEVSTSKTGKHGHAKCNF
Sbjct: 1   MSDEEHQFESKADAGASKTFPQQAGTIRKNGYIVIKNRPCKVVEVSTSKTGKHGHAKCNF 60

Query: 138 VGIDIFNGKKLEDIVPSSHNSDVPHVTRTDYQLLDITEDGFVSLLTDNGDTKDDLRLPTD 197
           VGIDIF GKKLEDIVPSSHNSDVPHV RTDYQL+DI+EDGFVSLLTD+GDTKDDL+LPTD
Sbjct: 61  VGIDIFTGKKLEDIVPSSHNSDVPHVNRTDYQLIDISEDGFVSLLTDSGDTKDDLKLPTD 120

Query: 198 DALLKQLKDGFAEGKDLIVSVQCAMGEEQICGLKDIGPK 237
           +ALLKQLKDGFAEGKDLIVSV  AMGEEQICGLKDIGPK
Sbjct: 121 EALLKQLKDGFAEGKDLIVSVMNAMGEEQICGLKDIGPK 159
[Close]
BLAST of Spo21082.1 vs. NCBI nr
Match: gi|731343821|ref|XP_010683083.1| (PREDICTED: eukaryotic translation initiation factor 5A-like [Beta vulgaris subsp. vulgaris])

HSP 1 Score: 306.6 bits (784), Expect = 3.700e-80
Identity = 149/159 (93.71%), Postives = 155/159 (97.48%), Query Frame = 1 

		  

Query: 78  MSDEEHQFESKADAGASKTFPQQAGTIRKNGYIVIKNRPCKVVEVSTSKTGKHGHAKCNF 137
           MSDEEHQFESKADAGASKTFPQQAGTIRKNGYIVIKNRPCKVVEVSTSKTGKHGHAKCNF
Sbjct: 1   MSDEEHQFESKADAGASKTFPQQAGTIRKNGYIVIKNRPCKVVEVSTSKTGKHGHAKCNF 60

Query: 138 VGIDIFNGKKLEDIVPSSHNSDVPHVTRTDYQLLDITEDGFVSLLTDNGDTKDDLRLPTD 197
           VGIDIF GKKLEDIVPSSHNSDVPHV RTDYQL+DI+EDGFVSLLTD+GDTKDDL+LP+D
Sbjct: 61  VGIDIFTGKKLEDIVPSSHNSDVPHVNRTDYQLIDISEDGFVSLLTDSGDTKDDLKLPSD 120

Query: 198 DALLKQLKDGFAEGKDLIVSVQCAMGEEQICGLKDIGPK 237
           +ALLKQLKDGFAEGKDLIVSV  AMGEEQICGLKDIGPK
Sbjct: 121 EALLKQLKDGFAEGKDLIVSVMNAMGEEQICGLKDIGPK 159
[Close]
BLAST of Spo21082.1 vs. NCBI nr
Match: gi|729386517|ref|XP_010551407.1| (PREDICTED: eukaryotic translation initiation factor 5A [Tarenaya hassleriana])

HSP 1 Score: 301.2 bits (770), Expect = 1.600e-78
Identity = 145/159 (91.19%), Postives = 153/159 (96.23%), Query Frame = 1 

		  

Query: 78  MSDEEHQFESKADAGASKTFPQQAGTIRKNGYIVIKNRPCKVVEVSTSKTGKHGHAKCNF 137
           MSDEEH FESKADAGASKT+PQQAGTIRKNGYIVIKNRPCKVVEVSTSKTGKHGHAKC+F
Sbjct: 1   MSDEEHHFESKADAGASKTYPQQAGTIRKNGYIVIKNRPCKVVEVSTSKTGKHGHAKCHF 60

Query: 138 VGIDIFNGKKLEDIVPSSHNSDVPHVTRTDYQLLDITEDGFVSLLTDNGDTKDDLRLPTD 197
           VGIDIF GKKLEDIVPSSHNSDVPHV RTDYQL+DI+EDGFVSLLTD+GDTKDDLRLPTD
Sbjct: 61  VGIDIFTGKKLEDIVPSSHNSDVPHVNRTDYQLIDISEDGFVSLLTDSGDTKDDLRLPTD 120

Query: 198 DALLKQLKDGFAEGKDLIVSVQCAMGEEQICGLKDIGPK 237
           ++LLKQ+KDGF EGKDLIVSV  AMGEEQICGLKDIGPK
Sbjct: 121 ESLLKQIKDGFEEGKDLIVSVMSAMGEEQICGLKDIGPK 159
[Close]
BLAST of Spo21082.1 vs. NCBI nr
Match: gi|629099147|gb|KCW64912.1| (hypothetical protein EUGRSUZ_G02468 [Eucalyptus grandis])

HSP 1 Score: 299.7 bits (766), Expect = 4.600e-78
Identity = 142/159 (89.31%), Postives = 152/159 (95.60%), Query Frame = 1 

		  

Query: 78  MSDEEHQFESKADAGASKTFPQQAGTIRKNGYIVIKNRPCKVVEVSTSKTGKHGHAKCNF 137
           MSDEEH FESKADAGASKT+PQQAGTIRKNGYIVIKNRPCKVVEVSTSKTGKHGHAKC+F
Sbjct: 1   MSDEEHHFESKADAGASKTYPQQAGTIRKNGYIVIKNRPCKVVEVSTSKTGKHGHAKCHF 60

Query: 138 VGIDIFNGKKLEDIVPSSHNSDVPHVTRTDYQLLDITEDGFVSLLTDNGDTKDDLRLPTD 197
           VGIDIFNGKKLEDIVPSSHN DVPHVTRTDYQL+DI+EDGF+SLLT+NG TKDDLRLPTD
Sbjct: 61  VGIDIFNGKKLEDIVPSSHNCDVPHVTRTDYQLIDISEDGFLSLLTENGSTKDDLRLPTD 120

Query: 198 DALLKQLKDGFAEGKDLIVSVQCAMGEEQICGLKDIGPK 237
           DALL Q+KDGFAEGKDL+V+  C+MGEEQIC LKDIGPK
Sbjct: 121 DALLGQIKDGFAEGKDLVVTAMCSMGEEQICALKDIGPK 159
[Close]
BLAST of Spo21082.1 vs. UniProtKB/TrEMBL
Match: A0A0K9R674_SPIOL (Eukaryotic translation initiation factor 5A OS=Spinacia oleracea GN=SOVF_108510 PE=3 SV=1)

HSP 1 Score: 325.9 bits (834), Expect = 4.200e-86
Identity = 159/159 (100.00%), Postives = 159/159 (100.00%), Query Frame = 1 

		  

Query: 78  MSDEEHQFESKADAGASKTFPQQAGTIRKNGYIVIKNRPCKVVEVSTSKTGKHGHAKCNF 137
           MSDEEHQFESKADAGASKTFPQQAGTIRKNGYIVIKNRPCKVVEVSTSKTGKHGHAKCNF
Sbjct: 1   MSDEEHQFESKADAGASKTFPQQAGTIRKNGYIVIKNRPCKVVEVSTSKTGKHGHAKCNF 60

Query: 138 VGIDIFNGKKLEDIVPSSHNSDVPHVTRTDYQLLDITEDGFVSLLTDNGDTKDDLRLPTD 197
           VGIDIFNGKKLEDIVPSSHNSDVPHVTRTDYQLLDITEDGFVSLLTDNGDTKDDLRLPTD
Sbjct: 61  VGIDIFNGKKLEDIVPSSHNSDVPHVTRTDYQLLDITEDGFVSLLTDNGDTKDDLRLPTD 120

Query: 198 DALLKQLKDGFAEGKDLIVSVQCAMGEEQICGLKDIGPK 237
           DALLKQLKDGFAEGKDLIVSVQCAMGEEQICGLKDIGPK
Sbjct: 121 DALLKQLKDGFAEGKDLIVSVQCAMGEEQICGLKDIGPK 159
[Close]
BLAST of Spo21082.1 vs. UniProtKB/TrEMBL
Match: A0A0J8EUZ0_BETVU (Eukaryotic translation initiation factor 5A OS=Beta vulgaris subsp. vulgaris GN=BVRB_6g153150 PE=3 SV=1)

HSP 1 Score: 308.1 bits (788), Expect = 9.000e-81
Identity = 150/159 (94.34%), Postives = 155/159 (97.48%), Query Frame = 1 

		  

Query: 78  MSDEEHQFESKADAGASKTFPQQAGTIRKNGYIVIKNRPCKVVEVSTSKTGKHGHAKCNF 137
           MSDEEHQFESKADAGASKTFPQQAGTIRKNGYIVIKNRPCKVVEVSTSKTGKHGHAKCNF
Sbjct: 1   MSDEEHQFESKADAGASKTFPQQAGTIRKNGYIVIKNRPCKVVEVSTSKTGKHGHAKCNF 60

Query: 138 VGIDIFNGKKLEDIVPSSHNSDVPHVTRTDYQLLDITEDGFVSLLTDNGDTKDDLRLPTD 197
           VGIDIF GKKLEDIVPSSHNSDVPHV RTDYQL+DI+EDGFVSLLTD+GDTKDDL+LPTD
Sbjct: 61  VGIDIFTGKKLEDIVPSSHNSDVPHVNRTDYQLIDISEDGFVSLLTDSGDTKDDLKLPTD 120

Query: 198 DALLKQLKDGFAEGKDLIVSVQCAMGEEQICGLKDIGPK 237
           +ALLKQLKDGFAEGKDLIVSV  AMGEEQICGLKDIGPK
Sbjct: 121 EALLKQLKDGFAEGKDLIVSVMNAMGEEQICGLKDIGPK 159
[Close]
BLAST of Spo21082.1 vs. UniProtKB/TrEMBL
Match: A0A0J8C4M0_BETVU (Eukaryotic translation initiation factor 5A OS=Beta vulgaris subsp. vulgaris GN=BVRB_6g153120 PE=3 SV=1)

HSP 1 Score: 306.6 bits (784), Expect = 2.600e-80
Identity = 149/159 (93.71%), Postives = 155/159 (97.48%), Query Frame = 1 

		  

Query: 78  MSDEEHQFESKADAGASKTFPQQAGTIRKNGYIVIKNRPCKVVEVSTSKTGKHGHAKCNF 137
           MSDEEHQFESKADAGASKTFPQQAGTIRKNGYIVIKNRPCKVVEVSTSKTGKHGHAKCNF
Sbjct: 1   MSDEEHQFESKADAGASKTFPQQAGTIRKNGYIVIKNRPCKVVEVSTSKTGKHGHAKCNF 60

Query: 138 VGIDIFNGKKLEDIVPSSHNSDVPHVTRTDYQLLDITEDGFVSLLTDNGDTKDDLRLPTD 197
           VGIDIF GKKLEDIVPSSHNSDVPHV RTDYQL+DI+EDGFVSLLTD+GDTKDDL+LP+D
Sbjct: 61  VGIDIFTGKKLEDIVPSSHNSDVPHVNRTDYQLIDISEDGFVSLLTDSGDTKDDLKLPSD 120

Query: 198 DALLKQLKDGFAEGKDLIVSVQCAMGEEQICGLKDIGPK 237
           +ALLKQLKDGFAEGKDLIVSV  AMGEEQICGLKDIGPK
Sbjct: 121 EALLKQLKDGFAEGKDLIVSVMNAMGEEQICGLKDIGPK 159
[Close]
BLAST of Spo21082.1 vs. UniProtKB/TrEMBL
Match: A0A059BFD5_EUCGR (Eukaryotic translation initiation factor 5A OS=Eucalyptus grandis GN=EUGRSUZ_G02468 PE=3 SV=1)

HSP 1 Score: 299.7 bits (766), Expect = 3.200e-78
Identity = 142/159 (89.31%), Postives = 152/159 (95.60%), Query Frame = 1 

		  

Query: 78  MSDEEHQFESKADAGASKTFPQQAGTIRKNGYIVIKNRPCKVVEVSTSKTGKHGHAKCNF 137
           MSDEEH FESKADAGASKT+PQQAGTIRKNGYIVIKNRPCKVVEVSTSKTGKHGHAKC+F
Sbjct: 1   MSDEEHHFESKADAGASKTYPQQAGTIRKNGYIVIKNRPCKVVEVSTSKTGKHGHAKCHF 60

Query: 138 VGIDIFNGKKLEDIVPSSHNSDVPHVTRTDYQLLDITEDGFVSLLTDNGDTKDDLRLPTD 197
           VGIDIFNGKKLEDIVPSSHN DVPHVTRTDYQL+DI+EDGF+SLLT+NG TKDDLRLPTD
Sbjct: 61  VGIDIFNGKKLEDIVPSSHNCDVPHVTRTDYQLIDISEDGFLSLLTENGSTKDDLRLPTD 120

Query: 198 DALLKQLKDGFAEGKDLIVSVQCAMGEEQICGLKDIGPK 237
           DALL Q+KDGFAEGKDL+V+  C+MGEEQIC LKDIGPK
Sbjct: 121 DALLGQIKDGFAEGKDLVVTAMCSMGEEQICALKDIGPK 159
[Close]
BLAST of Spo21082.1 vs. UniProtKB/TrEMBL
Match: A0A0D2UC98_GOSRA (Eukaryotic translation initiation factor 5A OS=Gossypium raimondii GN=B456_008G195800 PE=3 SV=1)

HSP 1 Score: 298.9 bits (764), Expect = 5.400e-78
Identity = 144/159 (90.57%), Postives = 151/159 (94.97%), Query Frame = 1 

		  

Query: 78  MSDEEHQFESKADAGASKTFPQQAGTIRKNGYIVIKNRPCKVVEVSTSKTGKHGHAKCNF 137
           MSDEEH FESKADAGASKT+PQQAGTIRKNGYIVIKNRPCKVVEVSTSKTGKHGHAKC+F
Sbjct: 1   MSDEEHHFESKADAGASKTYPQQAGTIRKNGYIVIKNRPCKVVEVSTSKTGKHGHAKCHF 60

Query: 138 VGIDIFNGKKLEDIVPSSHNSDVPHVTRTDYQLLDITEDGFVSLLTDNGDTKDDLRLPTD 197
           VGIDIF GKKLEDIVPSSHN DVPHV RTDYQL+DI+EDGFVSLLTD+GDTKDDLRLPTD
Sbjct: 61  VGIDIFTGKKLEDIVPSSHNCDVPHVNRTDYQLIDISEDGFVSLLTDSGDTKDDLRLPTD 120

Query: 198 DALLKQLKDGFAEGKDLIVSVQCAMGEEQICGLKDIGPK 237
           D LLKQ+KDGFAEGKDL+VSV  AMGEEQIC LKDIGPK
Sbjct: 121 DNLLKQIKDGFAEGKDLVVSVMSAMGEEQICALKDIGPK 159
[Close]
BLAST of Spo21082.1 vs. ExPASy Swiss-Prot
Match: IF5A_MANES (Eukaryotic translation initiation factor 5A OS=Manihot esculenta PE=2 SV=2)

HSP 1 Score: 292.4 bits (747), Expect = 4.600e-78
Identity = 140/159 (88.05%), Postives = 150/159 (94.34%), Query Frame = 1 

		  

Query: 78  MSDEEHQFESKADAGASKTFPQQAGTIRKNGYIVIKNRPCKVVEVSTSKTGKHGHAKCNF 137
           MSDEEH FESKADAGASKTFPQQAGTIRKNGYIVIKNRPCKV+EVSTSKTGKHGHAKC+F
Sbjct: 1   MSDEEHHFESKADAGASKTFPQQAGTIRKNGYIVIKNRPCKVMEVSTSKTGKHGHAKCHF 60

Query: 138 VGIDIFNGKKLEDIVPSSHNSDVPHVTRTDYQLLDITEDGFVSLLTDNGDTKDDLRLPTD 197
           VGIDIFNGKKLEDIVPSSHN DVPHV RTDYQL+DI+EDGFVSLLT+ G+TKDDLRLPTD
Sbjct: 61  VGIDIFNGKKLEDIVPSSHNCDVPHVNRTDYQLIDISEDGFVSLLTETGNTKDDLRLPTD 120

Query: 198 DALLKQLKDGFAEGKDLIVSVQCAMGEEQICGLKDIGPK 237
           + LL Q+KDGFAEGKDL+VSV  AMGEE+IC LKDIGPK
Sbjct: 121 ENLLSQIKDGFAEGKDLVVSVMSAMGEERICSLKDIGPK 159
[Close]
BLAST of Spo21082.1 vs. ExPASy Swiss-Prot
Match: IF5A2_NICPL (Eukaryotic translation initiation factor 5A-2 OS=Nicotiana plumbaginifolia GN=EIF-5A2 PE=2 SV=1)

HSP 1 Score: 290.4 bits (742), Expect = 1.700e-77
Identity = 140/159 (88.05%), Postives = 149/159 (93.71%), Query Frame = 1 

		  

Query: 78  MSDEEHQFESKADAGASKTFPQQAGTIRKNGYIVIKNRPCKVVEVSTSKTGKHGHAKCNF 137
           MSDEEHQFESKADAGASKT+PQQAGTIRKNG+IVIK RPCKVVEVSTSKTGKHGHAKC+F
Sbjct: 1   MSDEEHQFESKADAGASKTYPQQAGTIRKNGHIVIKGRPCKVVEVSTSKTGKHGHAKCHF 60

Query: 138 VGIDIFNGKKLEDIVPSSHNSDVPHVTRTDYQLLDITEDGFVSLLTDNGDTKDDLRLPTD 197
           V IDIF GKKLEDIVPSSHN DVPHV RTDYQL+DI+EDGFVSLLT+NG+TKDDLRLPTD
Sbjct: 61  VAIDIFTGKKLEDIVPSSHNCDVPHVNRTDYQLIDISEDGFVSLLTENGNTKDDLRLPTD 120

Query: 198 DALLKQLKDGFAEGKDLIVSVQCAMGEEQICGLKDIGPK 237
           D LL Q+KDGFAEGKDL+VSV  AMGEEQIC LKDIGPK
Sbjct: 121 DNLLTQIKDGFAEGKDLVVSVMSAMGEEQICALKDIGPK 159
[Close]
BLAST of Spo21082.1 vs. ExPASy Swiss-Prot
Match: IF5A5_SOLTU (Eukaryotic translation initiation factor 5A-5 OS=Solanum tuberosum GN=EIF5A5 PE=2 SV=1)

HSP 1 Score: 289.7 bits (740), Expect = 3.000e-77
Identity = 138/159 (86.79%), Postives = 150/159 (94.34%), Query Frame = 1 

		  

Query: 78  MSDEEHQFESKADAGASKTFPQQAGTIRKNGYIVIKNRPCKVVEVSTSKTGKHGHAKCNF 137
           MSDEEH FESKADAGASKT+PQQAGTIRK+G+IVIKNRPCKVVEVSTSKTGKHGHAKC+F
Sbjct: 1   MSDEEHHFESKADAGASKTYPQQAGTIRKSGHIVIKNRPCKVVEVSTSKTGKHGHAKCHF 60

Query: 138 VGIDIFNGKKLEDIVPSSHNSDVPHVTRTDYQLLDITEDGFVSLLTDNGDTKDDLRLPTD 197
           V IDIF GKKLEDIVPSSHN DVPHV RTDYQL+DI+EDGFVSLLT+NG+TKDDLRLPTD
Sbjct: 61  VAIDIFTGKKLEDIVPSSHNCDVPHVNRTDYQLIDISEDGFVSLLTENGNTKDDLRLPTD 120

Query: 198 DALLKQLKDGFAEGKDLIVSVQCAMGEEQICGLKDIGPK 237
           D LL Q+KDGFAEGKDL++SV  AMGEEQICG+KDIGPK
Sbjct: 121 DTLLAQVKDGFAEGKDLVLSVMSAMGEEQICGIKDIGPK 159
[Close]
BLAST of Spo21082.1 vs. ExPASy Swiss-Prot
Match: IF5A_SENVE (Eukaryotic translation initiation factor 5A OS=Senecio vernalis GN=EIFSV1 PE=2 SV=1)

HSP 1 Score: 289.3 bits (739), Expect = 3.900e-77
Identity = 139/159 (87.42%), Postives = 149/159 (93.71%), Query Frame = 1 

		  

Query: 78  MSDEEHQFESKADAGASKTFPQQAGTIRKNGYIVIKNRPCKVVEVSTSKTGKHGHAKCNF 137
           MSDEEHQFESKADAGASKT+PQQAGTIRK G+IVIKNR CKVVEVSTSKTGKHGHAKC+F
Sbjct: 1   MSDEEHQFESKADAGASKTYPQQAGTIRKGGHIVIKNRACKVVEVSTSKTGKHGHAKCHF 60

Query: 138 VGIDIFNGKKLEDIVPSSHNSDVPHVTRTDYQLLDITEDGFVSLLTDNGDTKDDLRLPTD 197
           V IDIFNGKKLEDIVPSSHN DVPHV RTDYQL+DI+EDGFVSLLT+NG+TKDDL+LPTD
Sbjct: 61  VAIDIFNGKKLEDIVPSSHNCDVPHVNRTDYQLIDISEDGFVSLLTENGNTKDDLKLPTD 120

Query: 198 DALLKQLKDGFAEGKDLIVSVQCAMGEEQICGLKDIGPK 237
           DALL Q+KDGF EGKDL+VSV  AMGEEQIC LKDIGPK
Sbjct: 121 DALLTQIKDGFGEGKDLVVSVMSAMGEEQICALKDIGPK 159
[Close]
BLAST of Spo21082.1 vs. ExPASy Swiss-Prot
Match: IF5A1_SOLLC (Eukaryotic translation initiation factor 5A-1 OS=Solanum lycopersicum PE=2 SV=1)

HSP 1 Score: 289.3 bits (739), Expect = 3.900e-77
Identity = 138/159 (86.79%), Postives = 149/159 (93.71%), Query Frame = 1 

		  

Query: 78  MSDEEHQFESKADAGASKTFPQQAGTIRKNGYIVIKNRPCKVVEVSTSKTGKHGHAKCNF 137
           MSDEEH FESKADAGASKT+PQQAGTIRK G+IVIKNRPCKVVEVSTSKTGKHGHAKC+F
Sbjct: 1   MSDEEHHFESKADAGASKTYPQQAGTIRKGGHIVIKNRPCKVVEVSTSKTGKHGHAKCHF 60

Query: 138 VGIDIFNGKKLEDIVPSSHNSDVPHVTRTDYQLLDITEDGFVSLLTDNGDTKDDLRLPTD 197
           V IDIF GKKLEDIVPSSHN DVPHV RTDYQL+DI+EDGFVSLLT+NG+TKDDLRLPTD
Sbjct: 61  VAIDIFTGKKLEDIVPSSHNCDVPHVNRTDYQLIDISEDGFVSLLTENGNTKDDLRLPTD 120

Query: 198 DALLKQLKDGFAEGKDLIVSVQCAMGEEQICGLKDIGPK 237
           D LL Q+KDGFAEGKDL++SV  AMGEEQICG+KDIGPK
Sbjct: 121 DTLLAQVKDGFAEGKDLVLSVMSAMGEEQICGIKDIGPK 159
[Close]
BLAST of Spo21082.1 vs. TAIR (Arabidopsis)
Match: AT1G13950.1 (eukaryotic elongation factor 5A-1)

HSP 1 Score: 270.8 bits (691), Expect = 8.000e-73
Identity = 132/159 (83.02%), Postives = 143/159 (89.94%), Query Frame = 1 

		  

Query: 78  MSDEEHQFESKADAGASKTFPQQAGTIRKNGYIVIKNRPCKVVEVSTSKTGKHGHAKCNF 137
           MSDEEH FES +DAGASKT+PQQAGTIRKNGYIVIKNRPCKVVEVSTSKTGKHGHAKC+F
Sbjct: 1   MSDEEHHFES-SDAGASKTYPQQAGTIRKNGYIVIKNRPCKVVEVSTSKTGKHGHAKCHF 60

Query: 138 VGIDIFNGKKLEDIVPSSHNSDVPHVTRTDYQLLDITEDGFVSLLTDNGDTKDDLRLPTD 197
           V IDIF  KKLEDIVPSSHN DVPHV RTDYQL+DI+EDG+VSLLTDNG TKDDL+LP D
Sbjct: 61  VAIDIFTSKKLEDIVPSSHNCDVPHVNRTDYQLIDISEDGYVSLLTDNGSTKDDLKLPND 120

Query: 198 DALLKQLKDGFAEGKDLIVSVQCAMGEEQICGLKDIGPK 237
           D LL+Q+K GF +GKDL+VSV  AMGEEQI  LKDIGPK
Sbjct: 121 DTLLQQIKSGFDDGKDLVVSVMSAMGEEQINALKDIGPK 158
[Close]
BLAST of Spo21082.1 vs. TAIR (Arabidopsis)
Match: AT1G69410.1 (eukaryotic elongation factor 5A-3)

HSP 1 Score: 265.0 bits (676), Expect = 4.400e-71
Identity = 127/159 (79.87%), Postives = 142/159 (89.31%), Query Frame = 1 

		  

Query: 78  MSDEEHQFESKADAGASKTFPQQAGTIRKNGYIVIKNRPCKVVEVSTSKTGKHGHAKCNF 137
           MSD+EH FES +DAGASKT+PQQAG IRK G+IVIK RPCKVVEVSTSKTGKHGHAKC+F
Sbjct: 1   MSDDEHHFES-SDAGASKTYPQQAGNIRKGGHIVIKGRPCKVVEVSTSKTGKHGHAKCHF 60

Query: 138 VGIDIFNGKKLEDIVPSSHNSDVPHVTRTDYQLLDITEDGFVSLLTDNGDTKDDLRLPTD 197
           V IDIF  KKLEDIVPSSHN DVPHV R DYQL+DI+EDGFVSLLTDNG TKDDL+LPTD
Sbjct: 61  VAIDIFTSKKLEDIVPSSHNCDVPHVNRVDYQLIDISEDGFVSLLTDNGSTKDDLKLPTD 120

Query: 198 DALLKQLKDGFAEGKDLIVSVQCAMGEEQICGLKDIGPK 237
           +ALL QLK+GF EGKD++VSV  AMGEEQ+C LK++GPK
Sbjct: 121 EALLTQLKNGFEEGKDIVVSVMSAMGEEQMCALKEVGPK 158
[Close]
BLAST of Spo21082.1 vs. TAIR (Arabidopsis)
Match: AT1G26630.1 (Eukaryotic translation initiation factor 5A-1 (eIF-5A 1) protein)

HSP 1 Score: 248.8 bits (634), Expect = 3.300e-66
Identity = 118/157 (75.16%), Postives = 137/157 (87.26%), Query Frame = 1 

		  

Query: 78  MSDEEHQFESKADAGASKTFPQQAGTIRKNGYIVIKNRPCKVVEVSTSKTGKHGHAKCNF 137
           MSD+EH FE+ +++GASKT+PQ AG IRK G+IVIKNRPCKVVEVSTSKTGKHGHAKC+F
Sbjct: 1   MSDDEHHFEA-SESGASKTYPQSAGNIRKGGHIVIKNRPCKVVEVSTSKTGKHGHAKCHF 60

Query: 138 VGIDIFNGKKLEDIVPSSHNSDVPHVTRTDYQLLDITEDGFVSLLTDNGDTKDDLRLPTD 197
           V IDIF  KKLEDIVPSSHN DVPHV R DYQL+DITEDGFVSLLTD+G TKDDL+LPTD
Sbjct: 61  VAIDIFTAKKLEDIVPSSHNCDVPHVNRVDYQLIDITEDGFVSLLTDSGGTKDDLKLPTD 120

Query: 198 DALLKQLKDGFAEGKDLIVSVQCAMGEEQICGLKDIG 235
           D L  Q++ GF EGKD++VSV  +MGEEQIC +K++G
Sbjct: 121 DGLTAQMRLGFDEGKDIVVSVMSSMGEEQICAVKEVG 156
The following BLAST results are available for this feature:
BLAST of Spo21082.1 vs. NCBI nr
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. NCBI nr)
Total hits: 5
Match NameE-valueIdentityDescription
gi|902202628|gb|KNA14317.1|6.0e-86100.hypothetical protein SOVF_1085... [more]
gi|731343827|ref|XP_010683086.1|1.3e-8094.3PREDICTED: eukaryotic translat... [more]
gi|731343821|ref|XP_010683083.1|3.7e-8093.7PREDICTED: eukaryotic translat... [more]
gi|729386517|ref|XP_010551407.1|1.6e-7891.1PREDICTED: eukaryotic translat... [more]
gi|629099147|gb|KCW64912.1|4.6e-7889.3hypothetical protein EUGRSUZ_G... [more]
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BLAST of Spo21082.1 vs. UniProtKB/TrEMBL
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. UniprotKB/TrEMBL)
Total hits: 5
Match NameE-valueIdentityDescription
A0A0K9R674_SPIOL4.2e-86100.Eukaryotic translation initiat... [more]
A0A0J8EUZ0_BETVU9.0e-8194.3Eukaryotic translation initiat... [more]
A0A0J8C4M0_BETVU2.6e-8093.7Eukaryotic translation initiat... [more]
A0A059BFD5_EUCGR3.2e-7889.3Eukaryotic translation initiat... [more]
A0A0D2UC98_GOSRA5.4e-7890.5Eukaryotic translation initiat... [more]
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BLAST of Spo21082.1 vs. ExPASy Swiss-Prot
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. ExPASy SwissProt)
Total hits: 5
Match NameE-valueIdentityDescription
IF5A_MANES4.6e-7888.0Eukaryotic translation initiat... [more]
IF5A2_NICPL1.7e-7788.0Eukaryotic translation initiat... [more]
IF5A5_SOLTU3.0e-7786.7Eukaryotic translation initiat... [more]
IF5A_SENVE3.9e-7787.4Eukaryotic translation initiat... [more]
IF5A1_SOLLC3.9e-7786.7Eukaryotic translation initiat... [more]
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BLAST of Spo21082.1 vs. TAIR (Arabidopsis)
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. TAIR)
Total hits: 3
Match NameE-valueIdentityDescription
AT1G13950.18.0e-7383.0eukaryotic elongation factor 5... [more]
AT1G69410.14.4e-7179.8eukaryotic elongation factor 5... [more]
AT1G26630.13.3e-6675.1Eukaryotic translation initiat... [more]
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InterPro
Analysis Name: InterPro Annotations of S. oleracea
Date Performed: 2018-06-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001884Translation elongation factor IF5APANTHERPTHR11673TRANSLATION INITIATION FACTOR 5A-RELATEDcoord: 79..236
score: 1.1E
IPR001884Translation elongation factor IF5ATIGRFAMsTIGR00037TIGR00037coord: 95..228
score: 9.6
IPR008991Translation protein SH3-like domainunknownSSF50104Translation proteins SH3-like domaincoord: 92..170
score: 1.81
IPR012340Nucleic acid-binding, OB-foldGENE3D2.40.50.140coord: 163..234
score: 3.1
IPR012340Nucleic acid-binding, OB-foldunknownSSF50249Nucleic acid-binding proteinscoord: 163..233
score: 4.91
IPR014722Ribosomal protein L2 domain 2GENE3D2.30.30.30coord: 92..161
score: 2.8
IPR019769Translation elongation factor, IF5A, hypusine sitePROSITEPS00302IF5A_HYPUSINEcoord: 127..134
scor
IPR020189Translation elongation factor, IF5A C-terminalPFAMPF01287eIF-5acoord: 162..231
score: 6.2
IPR020189Translation elongation factor, IF5A C-terminalSMARTSM01376eIF_5a_2coord: 162..231
score: 6.3
NoneNo IPR availablePANTHERPTHR11673:SF8SUBFAMILY NOT NAMEDcoord: 79..236
score: 1.1E

GO Annotation
GO Assignments
This mRNA is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0045901 positive regulation of translational elongation
biological_process GO:0045905 positive regulation of translational termination
biological_process GO:0006452 translational frameshifting
biological_process GO:0006446 regulation of translational initiation
cellular_component GO:0005840 ribosome
molecular_function GO:0043022 ribosome binding
molecular_function GO:0003723 RNA binding
molecular_function GO:0003746 translation elongation factor activity
molecular_function GO:0003743 translation initiation factor activity