Overview
Sequences
The following sequences are available for this feature:
Legend: polypeptideexonCDS Hold the cursor over a type above to highlight its positions in the sequence below.AGTTTTGTGGCTTTGAAGATTCAAAAAAGTGCACCGCAGTTTGCTCAGGCTGCCCTTCATGAAATTGAAGTCCTTTCAGCGATTGCTGATGGAGAACCAACTCATTCCAAGTATGTAGTTCGATTGATCGATAACTTCAAGCATACGGGGCCAAATGGGCAGCACCTGTGCATGGTTCTTGAGTTTCTAGGGGATAGCTTGCTTCGTTTAATTAGATACAACCGTCACAAAGGTATGGATCTGAACAAAGTTAGAGAAATTTGCAAATGTGTTTTGATGGGCTTGGATTATTTGCATAGGGAGCTTAATATAATCCACACAGACCTAAAGCCGGAAAACATTCTTCTTGTCTCTCCCATTGACCCCTCTAAAGATCCAGTAAAATCTGGATTTACCCCAATTCTTGAGAAGCCTGAAGGAGGAAACCATAATGGTGGAGGAGTTTCAATGAGTTTNTTACCCCAATTCTTGAGAAGCCTGAAGGAGGAAACCATAATGGTGGAGGAGTTTCAATGA AGTTTTGTGGCTTTGAAGATTCAAAAAAGTGCACCGCAGTTTGCTCAGGCTGCCCTTCATGAAATTGAAGTCCTTTCAGCGATTGCTGATGGAGAACCAACTCATTCCAAGTATGTAGTTCGATTGATCGATAACTTCAAGCATACGGGGCCAAATGGGCAGCACCTGTGCATGGTTCTTGAGTTTCTAGGGGATAGCTTGCTTCGTTTAATTAGATACAACCGTCACAAAGGTATGGATCTGAACAAAGTTAGAGAAATTTGCAAATGTGTTTTGATGGGCTTGGATTATTTGCATAGGGAGCTTAATATAATCCACACAGACCTAAAGCCGGAAAACATTCTTCTTGTCTCTCCCATTGACCCCTCTAAAGATCCAGTAAAATCTGGATTTACCCCAATTCTTGAGAAGCCTGAAGGAGGAAACCATAATGGTGGAGGAGTTTCAATGAGTTTNTTACCCCAATTCTTGAGAAGCCTGAAGGAGGAAACCATAATGGTGGAGGAGTTTCAATGA AGTTTTGTGGCTTTGAAGATTCAAAAAAGTGCACCGCAGTTTGCTCAGGCTGCCCTTCATGAAATTGAAGTCCTTTCAGCGATTGCTGATGGAGAACCAACTCATTCCAAGTATGTAGTTCGATTGATCGATAACTTCAAGCATACGGGGCCAAATGGGCAGCACCTGTGCATGGTTCTTGAGTTTCTAGGGGATAGCTTGCTTCGTTTAATTAGATACAACCGTCACAAAGGTATGGATCTGAACAAAGTTAGAGAAATTTGCAAATGTGTTTTGATGGGCTTGGATTATTTGCATAGGGAGCTTAATATAATCCACACAGACCTAAAGCCGGAAAACATTCTTCTTGTCTCTCCCATTGACCCCTCTAAAGATCCAGTAAAATCTGGATTTACCCCAATTCTTGAGAAGCCTGAAGGAGGAAACCATAATGGTGGAGGAGTTTCAATGAGTTTNTTACCCCAATTCTTGAGAAGCCTGAAGGAGGAAACCATAATGGTGGAGGAGTTTCAATGA SFVALKIQKSAPQFAQAALHEIEVLSAIADGEPTHSKYVVRLIDNFKHTGPNGQHLCMVLEFLGDSLLRLIRYNRHKGMDLNKVREICKCVLMGLDYLHRELNIIHTDLKPENILLVSPIDPSKDPVKSGFTPILEKPEGGNHNGGGVSMSXLPQFLRSLKEETIMVEEFQ Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Homology
BLAST of Spo08314.1 vs. NCBI nr
Match: gi|902225590|gb|KNA20111.1| (hypothetical protein SOVF_055320 [Spinacia oleracea]) HSP 1 Score: 312.4 bits (799), Expect = 4.900e-82 Identity = 152/158 (96.20%), Postives = 155/158 (98.10%), Query Frame = 1
BLAST of Spo08314.1 vs. NCBI nr
Match: gi|731339000|ref|XP_010680616.1| (PREDICTED: SRSF protein kinase 1-like [Beta vulgaris subsp. vulgaris]) HSP 1 Score: 287.7 bits (735), Expect = 1.300e-74 Identity = 138/157 (87.90%), Postives = 150/157 (95.54%), Query Frame = 1
BLAST of Spo08314.1 vs. NCBI nr
Match: gi|590701820|ref|XP_007046486.1| (Kinase superfamily protein isoform 1 [Theobroma cacao]) HSP 1 Score: 253.8 bits (647), Expect = 2.100e-64 Identity = 120/145 (82.76%), Postives = 136/145 (93.79%), Query Frame = 1
BLAST of Spo08314.1 vs. NCBI nr
Match: gi|661894782|emb|CDP01781.1| (unnamed protein product [Coffea canephora]) HSP 1 Score: 253.8 bits (647), Expect = 2.100e-64 Identity = 118/149 (79.19%), Postives = 137/149 (91.95%), Query Frame = 1
BLAST of Spo08314.1 vs. NCBI nr
Match: gi|590701824|ref|XP_007046487.1| (Kinesin motor family protein isoform 2 [Theobroma cacao]) HSP 1 Score: 253.8 bits (647), Expect = 2.100e-64 Identity = 120/145 (82.76%), Postives = 136/145 (93.79%), Query Frame = 1
BLAST of Spo08314.1 vs. UniProtKB/TrEMBL
Match: A0A0K9RKT6_SPIOL (Uncharacterized protein OS=Spinacia oleracea GN=SOVF_055320 PE=3 SV=1) HSP 1 Score: 312.4 bits (799), Expect = 3.400e-82 Identity = 152/158 (96.20%), Postives = 155/158 (98.10%), Query Frame = 1
BLAST of Spo08314.1 vs. UniProtKB/TrEMBL
Match: A0A0J8CA01_BETVU (Uncharacterized protein OS=Beta vulgaris subsp. vulgaris GN=BVRB_6g135760 PE=3 SV=1) HSP 1 Score: 287.7 bits (735), Expect = 9.100e-75 Identity = 138/157 (87.90%), Postives = 150/157 (95.54%), Query Frame = 1
BLAST of Spo08314.1 vs. UniProtKB/TrEMBL
Match: A0A061DKZ9_THECC (Kinase superfamily protein isoform 1 OS=Theobroma cacao GN=TCM_000057 PE=3 SV=1) HSP 1 Score: 253.8 bits (647), Expect = 1.500e-64 Identity = 120/145 (82.76%), Postives = 136/145 (93.79%), Query Frame = 1
BLAST of Spo08314.1 vs. UniProtKB/TrEMBL
Match: A0A061DF19_THECC (Kinesin motor family protein isoform 2 OS=Theobroma cacao GN=TCM_000057 PE=3 SV=1) HSP 1 Score: 253.8 bits (647), Expect = 1.500e-64 Identity = 120/145 (82.76%), Postives = 136/145 (93.79%), Query Frame = 1
BLAST of Spo08314.1 vs. UniProtKB/TrEMBL
Match: A0A068TZW5_COFCA (Uncharacterized protein OS=Coffea canephora GN=GSCOC_T00036940001 PE=3 SV=1) HSP 1 Score: 253.8 bits (647), Expect = 1.500e-64 Identity = 118/149 (79.19%), Postives = 137/149 (91.95%), Query Frame = 1
BLAST of Spo08314.1 vs. ExPASy Swiss-Prot
Match: SRPK_PHYPO (Serine/threonine-protein kinase SRPK OS=Physarum polycephalum PE=1 SV=1) HSP 1 Score: 126.3 bits (316), Expect = 3.100e-28 Identity = 61/114 (53.51%), Postives = 84/114 (73.68%), Query Frame = 1
BLAST of Spo08314.1 vs. ExPASy Swiss-Prot
Match: DSK1_SCHPO (Protein kinase dsk1 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=dsk1 PE=3 SV=2) HSP 1 Score: 119.4 bits (298), Expect = 3.800e-26 Identity = 55/116 (47.41%), Postives = 81/116 (69.83%), Query Frame = 1
BLAST of Spo08314.1 vs. ExPASy Swiss-Prot
Match: SKY1_DICDI (Probable serine/threonine-protein kinase sky1 OS=Dictyostelium discoideum GN=sky1 PE=3 SV=1) HSP 1 Score: 119.0 bits (297), Expect = 5.000e-26 Identity = 58/119 (48.74%), Postives = 83/119 (69.75%), Query Frame = 1
BLAST of Spo08314.1 vs. ExPASy Swiss-Prot
Match: SPK1_CAEBR (Serine/threonine-protein kinase spk-1 OS=Caenorhabditis briggsae GN=spk-1 PE=3 SV=2) HSP 1 Score: 114.4 bits (285), Expect = 1.200e-24 Identity = 58/117 (49.57%), Postives = 82/117 (70.09%), Query Frame = 1
BLAST of Spo08314.1 vs. ExPASy Swiss-Prot
Match: SRPK3_MOUSE (SRSF protein kinase 3 OS=Mus musculus GN=Srpk3 PE=1 SV=1) HSP 1 Score: 113.6 bits (283), Expect = 2.100e-24 Identity = 57/117 (48.72%), Postives = 82/117 (70.09%), Query Frame = 1
BLAST of Spo08314.1 vs. TAIR (Arabidopsis)
Match: AT2G17530.1 (Protein kinase superfamily protein) HSP 1 Score: 238.8 bits (608), Expect = 2.500e-63 Identity = 114/145 (78.62%), Postives = 132/145 (91.03%), Query Frame = 1
BLAST of Spo08314.1 vs. TAIR (Arabidopsis)
Match: AT4G35500.2 (Protein kinase superfamily protein) HSP 1 Score: 224.9 bits (572), Expect = 3.700e-59 Identity = 109/148 (73.65%), Postives = 128/148 (86.49%), Query Frame = 1
BLAST of Spo08314.1 vs. TAIR (Arabidopsis)
Match: AT3G53030.1 (ser/arg-rich protein kinase 4) HSP 1 Score: 172.6 bits (436), Expect = 2.200e-43 Identity = 79/134 (58.96%), Postives = 109/134 (81.34%), Query Frame = 1
BLAST of Spo08314.1 vs. TAIR (Arabidopsis)
Match: AT3G44850.1 (Protein kinase superfamily protein) HSP 1 Score: 170.6 bits (431), Expect = 8.200e-43 Identity = 77/134 (57.46%), Postives = 110/134 (82.09%), Query Frame = 1
BLAST of Spo08314.1 vs. TAIR (Arabidopsis)
Match: AT5G22840.1 (Protein kinase superfamily protein) HSP 1 Score: 169.9 bits (429), Expect = 1.400e-42 Identity = 79/134 (58.96%), Postives = 106/134 (79.10%), Query Frame = 1
The following BLAST results are available for this feature:
BLAST of Spo08314.1 vs. NCBI nr
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. NCBI nr) Total hits: 5
BLAST of Spo08314.1 vs. UniProtKB/TrEMBL
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. UniprotKB/TrEMBL) Total hits: 5
BLAST of Spo08314.1 vs. ExPASy Swiss-Prot
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. ExPASy SwissProt) Total hits: 5
BLAST of Spo08314.1 vs. TAIR (Arabidopsis)
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. TAIR) Total hits: 5
InterPro
Analysis Name: InterPro Annotations of S. oleracea
Date Performed: 2018-06-29
GO Annotation
GO Assignments
This mRNA is annotated with the following GO terms.
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