Overview
Sequences
The following sequences are available for this feature:
Legend: polypeptideCDSexon Hold the cursor over a type above to highlight its positions in the sequence below.ATGGCATCATTTACATCACCCTCATTCAATTCCCTCTCCTCCGTCACTGCAAACCCCCTCCACCACACAACCAATCACTCCTCCGCGGCACCATCTCACATCTCTTTCCGACGATCCTTCCCCACAGTCTCCGCCGTGTACTCCACCGCCACCTCTTCTGTAGGCGTCGCCTCGACTACTTCGCTTCAACAGTCTTCATTTTACGAGGTTTTGGGGATCCAGGCTGGGGCCTCCGGTAAGGAAATCAAAGCCGCGTATAGGAAATTGGCTAGGGTTCTTCACCCTGACGTTGCTATTGTGGCGTCTAACGGTGTTAAAGCTATCGGGTCATCATCGGCCGATGAATTTATTAAGGTTCACGAGGCATATGCTACGTTGTCTGATCCTAAAAAGAGGGCGGATTATGATCGGACGATGTGGCTTCAAGGCCGTCGTTTGAGTTACTCACCTGTTTATTATACTAGTGGAGCCACCAAATACGGTGGCGGTACGACTTCGTGTTCGGGTTTCTCCGGTTATACTCGCCGTACATGGGAGACTGATCAGTGCTGGTAG ATGGCATCATTTACATCACCCTCATTCAATTCCCTCTCCTCCGTCACTGCAAACCCCCTCCACCACACAACCAATCACTCCTCCGCGGCACCATCTCACATCTCTTTCCGACGATCCTTCCCCACAGTCTCCGCCGTGTACTCCACCGCCACCTCTTCTGTAGGCGTCGCCTCGACTACTTCGCTTCAACAGTCTTCATTTTACGAGGTTTTGGGGATCCAGGCTGGGGCCTCCGGTAAGGAAATCAAAGCCGCGTATAGGAAATTGGCTAGGGTTCTTCACCCTGACGTTGCTATTGTGGCGTCTAACGGTGTTAAAGCTATCGGGTCATCATCGGCCGATGAATTTATTAAGGTTCACGAGGCATATGCTACGTTGTCTGATCCTAAAAAGAGGGCGGATTATGATCGGACGATGTGGCTTCAAGGCCGTCGTTTGAGTTACTCACCTGTTTATTATACTAGTGGAGCCACCAAATACGGTGGCGGTACGACTTCGTGTTCGGGTTTCTCCGGTTATACTCGCCGTACATGGGAGACTGATCAGTGCTGGTAG ATGGCATCATTTACATCACCCTCATTCAATTCCCTCTCCTCCGTCACTGCAAACCCCCTCCACCACACAACCAATCACTCCTCCGCGGCACCATCTCACATCTCTTTCCGACGATCCTTCCCCACAGTCTCCGCCGTGTACTCCACCGCCACCTCTTCTGTAGGCGTCGCCTCGACTACTTCGCTTCAACAGTCTTCATTTTACGAGGTTTTGGGGATCCAGGCTGGGGCCTCCGGTAAGGAAATCAAAGCCGCGTATAGGAAATTGGCTAGGGTTCTTCACCCTGACGTTGCTATTGTGGCGTCTAACGGTGTTAAAGCTATCGGGTCATCATCGGCCGATGAATTTATTAAGGTTCACGAGGCATATGCTACGTTGTCTGATCCTAAAAAGAGGGCGGATTATGATCGGACGATGTGGCTTCAAGGCCGTCGTTTGAGTTACTCACCTGTTTATTATACTAGTGGAGCCACCAAATACGGTGGCGGTACGACTTCGTGTTCGGGTTTCTCCGGTTATACTCGCCGTACATGGGAGACTGATCAGTGCTGGTAG MASFTSPSFNSLSSVTANPLHHTTNHSSAAPSHISFRRSFPTVSAVYSTATSSVGVASTTSLQQSSFYEVLGIQAGASGKEIKAAYRKLARVLHPDVAIVASNGVKAIGSSSADEFIKVHEAYATLSDPKKRADYDRTMWLQGRRLSYSPVYYTSGATKYGGGTTSCSGFSGYTRRTWETDQCW Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
Homology
BLAST of Spo08372.1 vs. NCBI nr
Match: gi|902227262|gb|KNA20631.1| (hypothetical protein SOVF_050590 [Spinacia oleracea]) HSP 1 Score: 355.5 bits (911), Expect = 5.500e-95 Identity = 184/184 (100.00%), Postives = 184/184 (100.00%), Query Frame = 1
BLAST of Spo08372.1 vs. NCBI nr
Match: gi|731360536|ref|XP_010691874.1| (PREDICTED: chaperone protein dnaJ 11, chloroplastic-like [Beta vulgaris subsp. vulgaris]) HSP 1 Score: 232.3 bits (591), Expect = 7.000e-58 Identity = 132/187 (70.59%), Postives = 151/187 (80.75%), Query Frame = 1
BLAST of Spo08372.1 vs. NCBI nr
Match: gi|255538960|ref|XP_002510545.1| (PREDICTED: chaperone protein dnaJ 11, chloroplastic [Ricinus communis]) HSP 1 Score: 132.1 bits (331), Expect = 9.900e-28 Identity = 91/183 (49.73%), Postives = 114/183 (62.30%), Query Frame = 1
BLAST of Spo08372.1 vs. NCBI nr
Match: gi|224083040|ref|XP_002306936.1| (hypothetical protein POPTR_0005s26220g [Populus trichocarpa]) HSP 1 Score: 131.3 bits (329), Expect = 1.700e-27 Identity = 91/183 (49.73%), Postives = 117/183 (63.93%), Query Frame = 1
BLAST of Spo08372.1 vs. NCBI nr
Match: gi|743903442|ref|XP_011045071.1| (PREDICTED: chaperone protein dnaJ 11, chloroplastic-like [Populus euphratica]) HSP 1 Score: 131.3 bits (329), Expect = 1.700e-27 Identity = 91/186 (48.92%), Postives = 113/186 (60.75%), Query Frame = 1
BLAST of Spo08372.1 vs. UniProtKB/TrEMBL
Match: A0A0K9RMA3_SPIOL (Uncharacterized protein OS=Spinacia oleracea GN=SOVF_050590 PE=4 SV=1) HSP 1 Score: 355.5 bits (911), Expect = 3.800e-95 Identity = 184/184 (100.00%), Postives = 184/184 (100.00%), Query Frame = 1
BLAST of Spo08372.1 vs. UniProtKB/TrEMBL
Match: A0A0J8BFX2_BETVU (Uncharacterized protein OS=Beta vulgaris subsp. vulgaris GN=BVRB_1g016400 PE=4 SV=1) HSP 1 Score: 232.3 bits (591), Expect = 4.900e-58 Identity = 132/187 (70.59%), Postives = 151/187 (80.75%), Query Frame = 1
BLAST of Spo08372.1 vs. UniProtKB/TrEMBL
Match: B9R8A2_RICCO (Chaperone protein dnaJ 11, chloroplast, putative OS=Ricinus communis GN=RCOM_1598190 PE=4 SV=1) HSP 1 Score: 132.1 bits (331), Expect = 6.900e-28 Identity = 91/183 (49.73%), Postives = 114/183 (62.30%), Query Frame = 1
BLAST of Spo08372.1 vs. UniProtKB/TrEMBL
Match: A9PK11_9ROSI (Putative uncharacterized protein OS=Populus trichocarpa x Populus deltoides PE=2 SV=1) HSP 1 Score: 131.3 bits (329), Expect = 1.200e-27 Identity = 91/183 (49.73%), Postives = 117/183 (63.93%), Query Frame = 1
BLAST of Spo08372.1 vs. UniProtKB/TrEMBL
Match: A9PHU4_POPTR (Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0005s26220g PE=2 SV=1) HSP 1 Score: 131.3 bits (329), Expect = 1.200e-27 Identity = 91/183 (49.73%), Postives = 117/183 (63.93%), Query Frame = 1
BLAST of Spo08372.1 vs. ExPASy Swiss-Prot
Match: DNJ11_ARATH (Chaperone protein dnaJ 11, chloroplastic OS=Arabidopsis thaliana GN=ATJ11 PE=1 SV=2) HSP 1 Score: 102.4 bits (254), Expect = 5.200e-21 Identity = 56/120 (46.67%), Postives = 70/120 (58.33%), Query Frame = 1
BLAST of Spo08372.1 vs. ExPASy Swiss-Prot
Match: DNAJ_METTH (Chaperone protein DnaJ OS=Methanothermobacter thermautotrophicus (strain ATCC 29096 / DSM 1053 / JCM 10044 / NBRC 100330 / Delta H) GN=dnaJ PE=3 SV=1) HSP 1 Score: 66.6 bits (161), Expect = 3.200e-10 Identity = 35/76 (46.05%), Postives = 48/76 (63.16%), Query Frame = 1
BLAST of Spo08372.1 vs. ExPASy Swiss-Prot
Match: DNAJ_ENTFA (Chaperone protein DnaJ OS=Enterococcus faecalis (strain ATCC 700802 / V583) GN=dnaJ PE=3 SV=1) HSP 1 Score: 66.2 bits (160), Expect = 4.200e-10 Identity = 45/109 (41.28%), Postives = 58/109 (53.21%), Query Frame = 1
BLAST of Spo08372.1 vs. ExPASy Swiss-Prot
Match: DNAJ1_PROAC (Chaperone protein DnaJ 1 OS=Propionibacterium acnes (strain KPA171202 / DSM 16379) GN=dnaJ1 PE=3 SV=1) HSP 1 Score: 65.9 bits (159), Expect = 5.400e-10 Identity = 36/73 (49.32%), Postives = 44/73 (60.27%), Query Frame = 1
BLAST of Spo08372.1 vs. ExPASy Swiss-Prot
Match: DNAJ_EXISA (Chaperone protein DnaJ OS=Exiguobacterium sp. (strain ATCC BAA-1283 / AT1b) GN=dnaJ PE=3 SV=1) HSP 1 Score: 65.5 bits (158), Expect = 7.100e-10 Identity = 42/109 (38.53%), Postives = 57/109 (52.29%), Query Frame = 1
BLAST of Spo08372.1 vs. TAIR (Arabidopsis)
Match: AT4G36040.1 (Chaperone DnaJ-domain superfamily protein) HSP 1 Score: 102.4 bits (254), Expect = 3.000e-22 Identity = 56/120 (46.67%), Postives = 70/120 (58.33%), Query Frame = 1
BLAST of Spo08372.1 vs. TAIR (Arabidopsis)
Match: AT2G17880.1 (Chaperone DnaJ-domain superfamily protein) HSP 1 Score: 95.5 bits (236), Expect = 3.600e-20 Identity = 69/185 (37.30%), Postives = 103/185 (55.68%), Query Frame = 1
BLAST of Spo08372.1 vs. TAIR (Arabidopsis)
Match: AT3G13310.1 (Chaperone DnaJ-domain superfamily protein) HSP 1 Score: 77.0 bits (188), Expect = 1.300e-14 Identity = 53/149 (35.57%), Postives = 70/149 (46.98%), Query Frame = 1
BLAST of Spo08372.1 vs. TAIR (Arabidopsis)
Match: AT4G13830.2 (DNAJ-like 20) HSP 1 Score: 60.5 bits (145), Expect = 1.300e-9 Identity = 46/116 (39.66%), Postives = 65/116 (56.03%), Query Frame = 1
BLAST of Spo08372.1 vs. TAIR (Arabidopsis)
Match: AT4G39150.1 (DNAJ heat shock N-terminal domain-containing protein) HSP 1 Score: 52.8 bits (125), Expect = 2.700e-7 Identity = 31/77 (40.26%), Postives = 44/77 (57.14%), Query Frame = 1
The following BLAST results are available for this feature:
BLAST of Spo08372.1 vs. NCBI nr
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. NCBI nr) Total hits: 5
BLAST of Spo08372.1 vs. UniProtKB/TrEMBL
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. UniprotKB/TrEMBL) Total hits: 5
BLAST of Spo08372.1 vs. ExPASy Swiss-Prot
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. ExPASy SwissProt) Total hits: 5
BLAST of Spo08372.1 vs. TAIR (Arabidopsis)
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. TAIR) Total hits: 5
InterPro
Analysis Name: InterPro Annotations of S. oleracea
Date Performed: 2018-06-29
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