Spo01398.1 (mRNA) | SpinachBase

Overview


Name	Spo01398.1
Type	mRNA
Organism	Spinacia oleracea (Spinach)
Description	NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 13
Location	SpoScf_04025 : 4845 .. 8822 (-)
Sequence length	432

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDSexon

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGACGGAGGCAGTAATCAGGAACAAGCCAGGAATGGCTAGCGTGAAGGACATGCCTCTCCTTCAAGACGGTCCTCCACCTGGTGGTTTCGCTCCCGTCCGTTACGCCCGTCGTATCCCCACCAAGGGTCCCAGCGCTATTGCCATCTTCTTAACCACTTTCGGCGCTTTCGCTTGGGGTATGTACCAGGTTGGCGAGGGCAACAAGAAGCGCCGGTATTCTCTCTTTCTATCTCTTTTTTTTCCCTTTCTTTTGTAGATGAAGCTGGATCTTGTTGATTTTGCTTTGTTTAATCGCATTTGACTTTTTGGGGATATCTTGAATTGAAATTGATGGGTGGGTATACTGTGGATTTAAAAAATTGGTGCTTAAAGGCCTTCGATTGGCTGACATTTATGGGTTTTGATGTTTTTGTTAAATGGTGGTTTGGGATTGTTGCCGGGTTTTTGTTTGTGAGATTTAAGAGCTTATGAGAAGAAATGAAATTGAAATTTGGAGCTGAATGAGCTACATTTAGTTGATTTAACTTAGGGTTTTCTACTGAAACAAGGATATAGCCTTTGTAAGTTGTTGGTATGATAGGTGGGTTTGTTAAGTCATTTTTTGTCGTGTGAGGAAGGTTTTACAGGGTTAGGCTTTGGGTGTCGAACATGTTGAAGAATAAAGTTAATGTAGAATGGTTGATGTTGGCAAATGTTAAAATGGAGTTATGGAAAGGTTAATGTAAGGAATGCTAAAATGAAGAATAAGGTTAATGTAAGAATGCTAGATAAAATAGTACATGGATTTCGCGGTTAAGGTGATTAGGAAGTCTAGGCCAATGACTATTTTCTGTGTTATGATTGGGTGGAATGAAATGATTTCCATGAAGAAAGAACGTCTAAGAGATCGACCATAATCTGTGCATCATAATCTGTGGAATCTAGAAGTGGTTATCTAATATTCTAGGAAATGTCTTTCATATCAATCCCTGTGGAAGTGTGGCTATGTCCATAACTACACCCATTGTTGACAGTTTGCTTTACCATACCAATCTGATTTGAATGTGAAGTGAATGGTTGACCGGGGTCATCCTTGTAGTTGTAGAAGATTTGTTCTTGAAGAAGAGACATGATGAAGGCCTGAACCACCTGATGCTGACTGAGAATGGACATTCTCTTCCTCGCGTTGCTCTATGCCATTCCATTTCGTGATTATGTAAGGGCATAAATAATTCCGAGATCTTTCTTCTGGGGACTTAGTTATTTACAATGTAGTAGCCTTATTTGTTGGATTGACTCTCCCTTGGATGAATGAACGCCAGATTTGATCTTCTTTTCACACATGTTTTGTTTACTCTGTAATCCTAATTACCGAAGGCGGTAAGTGGTTTAGGTGTTGTGAGAAATTTAAGCTGTCTTACCAGTTACCCCTTCAATTCTTCTATTACTACCTCCATTTACCTTGTTTTATTGATGAAGACTACTTCCAGTTTTTGGATTGGGCTTGTAGGATGTGAGTTAGACTAATATTGGTTGTTTATCATGTCATTTTTAAAACTAATAGCAAGTTCTGTTTCCTTCAGGATTAGGTTATTTGATGTGACACCATTGATCTTGAATTTCACTGGGATACTTATTTCAAATTCAGTTTCTGATTAATTTAATATAAATTTTCAACCAATAAATCTTTCTTTCTAGTCAATTTTGATTATTACTTCAACTAGCACTTAATGTATTTTGAATTTTCATGAAACATGAATTTTCCAACTCAAAGCACTACCCTTTTTATACACTATATATTGCTTTTTTTACATCAAAATTGAGCTTACACAGTATCAAATTGATATAGGACAATCTTATTGAAGTCAAAATTTTGATGATTTGTCAACCATGAAATGTGCTTAGTCAAGTACATGGTTAGGAGCCCTTTTGGCTAGTATAGGTATGCATATATGCTTAATCTGCGAAAAGGTCTATGCACTTGGCTCGTGAAGATGTTTATAGACTAGATTAATGATAGTTGGCCTGTAGGTTGATTGTCTACATTGTTTTATGTGGGAGGAGGCTAAATCCTGCTGATGAAAGAAATCAAACAATTCCCAGTCTTAATAAATGAAATGAGTGGACTGGATTGAATCCCAGTAAATAGATCTAATACAATAGGTAAGAATGACAACACCATGGTCTAGTGCGAGAATTAAAAAATTGTTGTGTTGCTGGTGATTTTGTGGTTATTTGGAGGTAAGATGAATATTGAAGAACATGTGTTGCTGAGATCAGAGATCTTTATGATTGTGTACTTTGGCTACCTATTGGACTGGGTTATTATTTACTCTCAATAAAATTGTGGTTTATGGGCCCCATTTCTGGTGGTTAAAGAGGCTCTTTTAGGCTACTTGCTTAGCATACTACGAGGAGCAGGTTTTTCGGATGGATTGCATGAAGAATTCTAGGGGTTTTCTAATAAAGGAAAGAGAGGTTAACTTTTGAACTGAGCATCTATGGCTTGGCTAGATTTTGTAGCTAATTGTTTTTCATGTTATCACCTGGGATGAGTCTCCCTCCAATTTGCTTCCCTTGTCACTCTACGTCTACGTAATGTCATGTAAATCACAGCAGCTTTTCTGAGTTGTGAGTCATCCATCACATATGGAATTTGGTTATGCAGGGGGATGTTCTTTGTGTTATCCATGAAAATTGATTACAGACTGCGAAACATTTATCTTTAGACGTATGTATAGCAAAAAAGTTCTCTGCTCTGCCAAAGTTTATGTGAATTATTTAATGACAATGCCTTTCCGCTAAAGGATTAAGACAGAAGTCTTTTTATGGTTTCAAATTATATTTGAGGTAAAATGGGGCTCCTTCAATCTTTTATCTGAAAAGGGAAACGGGTTTTAGGCTTTGGTTTAGTTTTCTTAGTATTTTTAACAGTGGGCTTCCACTGTCCTGAAGGCCCCTCTGCAATTTACCATATCCCTGATATGCAAAAAGGATTGTACTATTACTGCTATGTAATTAAGTCCAGAACTAAGAATAACTGTTTGAGGTAGCTACAAAGGCCCCCAATTCTGTGCACTGAGGTAAATTGATGTAATAACAACTAGGATATGTCTCATCATTCATGAATTCTGGTGACTACTAACTAGCTAAATTTCTGCAACCTTATGTCTTTTTCAACCATAAACCTCTTGCAAAACCATTCCTGCCATAAATTTCCTGTTGGCTTTTTTGTCACTTAGATGTCATTTCTTAATGATCAACCACTAGCCTTCCTTTCCCTGCCTCGCTTAGGTTTGATTCTTTGTAAAAAAGCTTTTACCATTCATGTCAGAAGATGATGAAAACTGTGAAGTCCAAAGTTGAAATCCAGTGCTTGTTATCAGATCCCAGCTACTAAACCCTGGATGACTATTATTACTCTTTATCAAAGTTGAAAATGACATGTTAGTTCATGGAGTATAGAGCTAGGATTCTACATATAAGCCTAATTATCTAGTTCTTAGTATGACATTATTTTTTACAAGGTAAGATGAAGGGCCCTACCGGGCCTGAACCCCTCTCGGGTTAACAGCCAGTAATGGCTGTGGAATGAAAATACGCTTCTATGTAGCTTTACTTAAAAGATGTTGGTGTATACTTATGATTAATATATGAATAGGGTAATCAAGGAAGAGAAATATGCTGCTCGCAGAGCTATACTGCCTTTGCTGCAAGCTGAAGAGGATGAAAGGTAATTAAACTTTCATTCTGATGCTTAGGATGTATTACTTCCTCTTGTTTTTAATTTTTTTTTTGCAGTAGGTATTATACATTGTTGTAAATTATTTTTTTACCCACCATGATTCACAGATTTGTCAAAGAATGGAAAAAGTACCTAGAAGACGAGGCCAGAATTATGAAGAACGTACCAGGCTGGAAAGTAGGCGAGAATGTTTACAACTCTGGGAGATGGATGCCTCCTGCAACTGGTGAGCTTCGTCCTGAAGTTTGGTGA

mRNA sequence

ATGACGGAGGCAGTAATCAGGAACAAGCCAGGAATGGCTAGCGTGAAGGACATGCCTCTCCTTCAAGACGGTCCTCCACCTGGTGGTTTCGCTCCCGTCCGTTACGCCCGTCGTATCCCCACCAAGGGTCCCAGCGCTATTGCCATCTTCTTAACCACTTTCGGCGCTTTCGCTTGGGGTATGTACCAGGTTGGCGAGGGCAACAAGAAGCGCCGGGTAATCAAGGAAGAGAAATATGCTGCTCGCAGAGCTATACTGCCTTTGCTGCAAGCTGAAGAGGATGAAAGATTTGTCAAAGAATGGAAAAAGTACCTAGAAGACGAGGCCAGAATTATGAAGAACGTACCAGGCTGGAAAGTAGGCGAGAATGTTTACAACTCTGGGAGATGGATGCCTCCTGCAACTGGTGAGCTTCGTCCTGAAGTTTGGTGA

Coding sequence (CDS)

ATGACGGAGGCAGTAATCAGGAACAAGCCAGGAATGGCTAGCGTGAAGGACATGCCTCTCCTTCAAGACGGTCCTCCACCTGGTGGTTTCGCTCCCGTCCGTTACGCCCGTCGTATCCCCACCAAGGGTCCCAGCGCTATTGCCATCTTCTTAACCACTTTCGGCGCTTTCGCTTGGGGTATGTACCAGGTTGGCGAGGGCAACAAGAAGCGCCGGGTAATCAAGGAAGAGAAATATGCTGCTCGCAGAGCTATACTGCCTTTGCTGCAAGCTGAAGAGGATGAAAGATTTGTCAAAGAATGGAAAAAGTACCTAGAAGACGAGGCCAGAATTATGAAGAACGTACCAGGCTGGAAAGTAGGCGAGAATGTTTACAACTCTGGGAGATGGATGCCTCCTGCAACTGGTGAGCTTCGTCCTGAAGTTTGGTGA

Protein sequence

MTEAVIRNKPGMASVKDMPLLQDGPPPGGFAPVRYARRIPTKGPSAIAIFLTTFGAFAWGMYQVGEGNKKRRVIKEEKYAARRAILPLLQAEEDERFVKEWKKYLEDEARIMKNVPGWKVGENVYNSGRWMPPATGELRPEVW

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
Spo01398	Spo01398	gene

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
Spo01398.1	Spo01398.1-protein	polypeptide

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Spo01398.1.CDS.3	Spo01398.1.CDS.3	CDS
Spo01398.1.CDS.2	Spo01398.1.CDS.2	CDS
Spo01398.1.CDS.1	Spo01398.1.CDS.1	CDS

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Spo01398.1.exon.3	Spo01398.1.exon.3	exon
Spo01398.1.exon.2	Spo01398.1.exon.2	exon
Spo01398.1.exon.1	Spo01398.1.exon.1	exon

Homology

[Close]

BLAST of Spo01398.1 vs. NCBI nr
Match: gi|902035027|gb|KNA02613.1| (hypothetical protein SOVF_216900 [Spinacia oleracea])

HSP 1 Score: 299.3 bits (765), Expect = 3.600e-78
Identity = 143/143 (100.00%), Postives = 143/143 (100.00%), Query Frame = 1

		  
Query: 1   MTEAVIRNKPGMASVKDMPLLQDGPPPGGFAPVRYARRIPTKGPSAIAIFLTTFGAFAWG 60
           MTEAVIRNKPGMASVKDMPLLQDGPPPGGFAPVRYARRIPTKGPSAIAIFLTTFGAFAWG
Sbjct: 1   MTEAVIRNKPGMASVKDMPLLQDGPPPGGFAPVRYARRIPTKGPSAIAIFLTTFGAFAWG 60

Query: 61  MYQVGEGNKKRRVIKEEKYAARRAILPLLQAEEDERFVKEWKKYLEDEARIMKNVPGWKV 120
           MYQVGEGNKKRRVIKEEKYAARRAILPLLQAEEDERFVKEWKKYLEDEARIMKNVPGWKV
Sbjct: 61  MYQVGEGNKKRRVIKEEKYAARRAILPLLQAEEDERFVKEWKKYLEDEARIMKNVPGWKV 120

Query: 121 GENVYNSGRWMPPATGELRPEVW 144
           GENVYNSGRWMPPATGELRPEVW
Sbjct: 121 GENVYNSGRWMPPATGELRPEVW 143

[Close]

BLAST of Spo01398.1 vs. NCBI nr
Match: gi|731376385|ref|XP_010667549.1| (PREDICTED: NADH dehydrogenase [ubiquinone])

HSP 1 Score: 293.1 bits (749), Expect = 2.600e-76
Identity = 140/143 (97.90%), Postives = 142/143 (99.30%), Query Frame = 1

		  
Query: 1   MTEAVIRNKPGMASVKDMPLLQDGPPPGGFAPVRYARRIPTKGPSAIAIFLTTFGAFAWG 60
           MTEAVIRNKPGMASVKDMPLLQDGPPPGGFAPVRYARRIPTKGPSA+AIFLTTFGAFAWG
Sbjct: 1   MTEAVIRNKPGMASVKDMPLLQDGPPPGGFAPVRYARRIPTKGPSAMAIFLTTFGAFAWG 60

Query: 61  MYQVGEGNKKRRVIKEEKYAARRAILPLLQAEEDERFVKEWKKYLEDEARIMKNVPGWKV 120
           MYQVGEGNKKRRVIKEEKYAARRAILPLLQAEEDERFV EWKKYLEDEARIMKNVPGWKV
Sbjct: 61  MYQVGEGNKKRRVIKEEKYAARRAILPLLQAEEDERFVIEWKKYLEDEARIMKNVPGWKV 120

Query: 121 GENVYNSGRWMPPATGELRPEVW 144
           GENVY+SGRWMPPATGELRPEVW
Sbjct: 121 GENVYHSGRWMPPATGELRPEVW 143

[Close]

BLAST of Spo01398.1 vs. NCBI nr
Match: gi|357113641|ref|XP_003558610.1| (PREDICTED: NADH dehydrogenase [ubiquinone])

HSP 1 Score: 276.2 bits (705), Expect = 3.300e-71
Identity = 127/143 (88.81%), Postives = 139/143 (97.20%), Query Frame = 1

		  
Query: 1   MTEAVIRNKPGMASVKDMPLLQDGPPPGGFAPVRYARRIPTKGPSAIAIFLTTFGAFAWG 60
           MTE+++RNKPGMASVKDMPLLQDGPPPGGFAPVRYARRIP+KGPSAIA+FLTTFGAF+WG
Sbjct: 1   MTESLVRNKPGMASVKDMPLLQDGPPPGGFAPVRYARRIPSKGPSAIALFLTTFGAFSWG 60

Query: 61  MYQVGEGNKKRRVIKEEKYAARRAILPLLQAEEDERFVKEWKKYLEDEARIMKNVPGWKV 120
           MYQVG+GNK RR +KEEK AAR AILP+LQAEEDERFVKEWKKYLE+EARIMKNVPGWKV
Sbjct: 61  MYQVGQGNKVRRALKEEKIAARSAILPMLQAEEDERFVKEWKKYLEEEARIMKNVPGWKV 120

Query: 121 GENVYNSGRWMPPATGELRPEVW 144
           GE+VYNSG+WMPPATGELRPEVW
Sbjct: 121 GESVYNSGKWMPPATGELRPEVW 143

[Close]

BLAST of Spo01398.1 vs. NCBI nr
Match: gi|1021027428|gb|KZM85215.1| (hypothetical protein DCAR_027363 [Daucus carota subsp. sativus])

HSP 1 Score: 275.8 bits (704), Expect = 4.300e-71
Identity = 128/143 (89.51%), Postives = 138/143 (96.50%), Query Frame = 1

		  
Query: 1   MTEAVIRNKPGMASVKDMPLLQDGPPPGGFAPVRYARRIPTKGPSAIAIFLTTFGAFAWG 60
           MTEA IRNKPGMASVKDMPLLQDGPPPGGFAPVRYARRIP KGPSA+AIFLTTFG F+WG
Sbjct: 1   MTEATIRNKPGMASVKDMPLLQDGPPPGGFAPVRYARRIPNKGPSAVAIFLTTFGVFSWG 60

Query: 61  MYQVGEGNKKRRVIKEEKYAARRAILPLLQAEEDERFVKEWKKYLEDEARIMKNVPGWKV 120
           MY+VG+GNK RR IKEEKYAARRAILP+LQAEEDERFVKEWKKYLE+EARIMK+VPGWKV
Sbjct: 61  MYEVGKGNKIRRAIKEEKYAARRAILPMLQAEEDERFVKEWKKYLEEEARIMKDVPGWKV 120

Query: 121 GENVYNSGRWMPPATGELRPEVW 144
           GE+VY+SGRWMPPA+GELRPEVW
Sbjct: 121 GESVYHSGRWMPPASGELRPEVW 143

[Close]

BLAST of Spo01398.1 vs. NCBI nr
Match: gi|976903131|gb|KVH91054.1| (GRIM-19-like protein [Cynara cardunculus var. scolymus])

HSP 1 Score: 272.3 bits (695), Expect = 4.700e-70
Identity = 126/143 (88.11%), Postives = 137/143 (95.80%), Query Frame = 1

		  
Query: 1   MTEAVIRNKPGMASVKDMPLLQDGPPPGGFAPVRYARRIPTKGPSAIAIFLTTFGAFAWG 60
           MTEA IRNKPGMASVKDMPLLQDGPPPGGFAPVRYARRIP+KGPSA+AIFL  FG F+WG
Sbjct: 1   MTEAFIRNKPGMASVKDMPLLQDGPPPGGFAPVRYARRIPSKGPSAVAIFLAAFGTFSWG 60

Query: 61  MYQVGEGNKKRRVIKEEKYAARRAILPLLQAEEDERFVKEWKKYLEDEARIMKNVPGWKV 120
           MY+VG+GNK RR IKEEKYAARRAILP+LQAEEDERFVKEWKKYLE+EARIMK+VPGWKV
Sbjct: 61  MYEVGKGNKIRRAIKEEKYAARRAILPMLQAEEDERFVKEWKKYLEEEARIMKDVPGWKV 120

Query: 121 GENVYNSGRWMPPATGELRPEVW 144
           GE+VY+SG+WMPPATGELRPEVW
Sbjct: 121 GESVYHSGKWMPPATGELRPEVW 143

[Close]

BLAST of Spo01398.1 vs. UniProtKB/TrEMBL
Match: A0A0K9Q7H2_SPIOL (Uncharacterized protein OS=Spinacia oleracea GN=SOVF_216900 PE=4 SV=1)

HSP 1 Score: 299.3 bits (765), Expect = 2.500e-78
Identity = 143/143 (100.00%), Postives = 143/143 (100.00%), Query Frame = 1

		  
Query: 1   MTEAVIRNKPGMASVKDMPLLQDGPPPGGFAPVRYARRIPTKGPSAIAIFLTTFGAFAWG 60
           MTEAVIRNKPGMASVKDMPLLQDGPPPGGFAPVRYARRIPTKGPSAIAIFLTTFGAFAWG
Sbjct: 1   MTEAVIRNKPGMASVKDMPLLQDGPPPGGFAPVRYARRIPTKGPSAIAIFLTTFGAFAWG 60

Query: 61  MYQVGEGNKKRRVIKEEKYAARRAILPLLQAEEDERFVKEWKKYLEDEARIMKNVPGWKV 120
           MYQVGEGNKKRRVIKEEKYAARRAILPLLQAEEDERFVKEWKKYLEDEARIMKNVPGWKV
Sbjct: 61  MYQVGEGNKKRRVIKEEKYAARRAILPLLQAEEDERFVKEWKKYLEDEARIMKNVPGWKV 120

Query: 121 GENVYNSGRWMPPATGELRPEVW 144
           GENVYNSGRWMPPATGELRPEVW
Sbjct: 121 GENVYNSGRWMPPATGELRPEVW 143

[Close]

BLAST of Spo01398.1 vs. UniProtKB/TrEMBL
Match: A0A0J8B2F7_BETVU (Uncharacterized protein OS=Beta vulgaris subsp. vulgaris GN=BVRB_009540 PE=4 SV=1)

HSP 1 Score: 293.1 bits (749), Expect = 1.800e-76
Identity = 140/143 (97.90%), Postives = 142/143 (99.30%), Query Frame = 1

		  
Query: 1   MTEAVIRNKPGMASVKDMPLLQDGPPPGGFAPVRYARRIPTKGPSAIAIFLTTFGAFAWG 60
           MTEAVIRNKPGMASVKDMPLLQDGPPPGGFAPVRYARRIPTKGPSA+AIFLTTFGAFAWG
Sbjct: 1   MTEAVIRNKPGMASVKDMPLLQDGPPPGGFAPVRYARRIPTKGPSAMAIFLTTFGAFAWG 60

Query: 61  MYQVGEGNKKRRVIKEEKYAARRAILPLLQAEEDERFVKEWKKYLEDEARIMKNVPGWKV 120
           MYQVGEGNKKRRVIKEEKYAARRAILPLLQAEEDERFV EWKKYLEDEARIMKNVPGWKV
Sbjct: 61  MYQVGEGNKKRRVIKEEKYAARRAILPLLQAEEDERFVIEWKKYLEDEARIMKNVPGWKV 120

Query: 121 GENVYNSGRWMPPATGELRPEVW 144
           GENVY+SGRWMPPATGELRPEVW
Sbjct: 121 GENVYHSGRWMPPATGELRPEVW 143

[Close]

BLAST of Spo01398.1 vs. UniProtKB/TrEMBL
Match: I1H8P9_BRADI (Uncharacterized protein OS=Brachypodium distachyon GN=BRADI_1g71700 PE=4 SV=1)

HSP 1 Score: 276.2 bits (705), Expect = 2.300e-71
Identity = 127/143 (88.81%), Postives = 139/143 (97.20%), Query Frame = 1

		  
Query: 1   MTEAVIRNKPGMASVKDMPLLQDGPPPGGFAPVRYARRIPTKGPSAIAIFLTTFGAFAWG 60
           MTE+++RNKPGMASVKDMPLLQDGPPPGGFAPVRYARRIP+KGPSAIA+FLTTFGAF+WG
Sbjct: 1   MTESLVRNKPGMASVKDMPLLQDGPPPGGFAPVRYARRIPSKGPSAIALFLTTFGAFSWG 60

Query: 61  MYQVGEGNKKRRVIKEEKYAARRAILPLLQAEEDERFVKEWKKYLEDEARIMKNVPGWKV 120
           MYQVG+GNK RR +KEEK AAR AILP+LQAEEDERFVKEWKKYLE+EARIMKNVPGWKV
Sbjct: 61  MYQVGQGNKVRRALKEEKIAARSAILPMLQAEEDERFVKEWKKYLEEEARIMKNVPGWKV 120

Query: 121 GENVYNSGRWMPPATGELRPEVW 144
           GE+VYNSG+WMPPATGELRPEVW
Sbjct: 121 GESVYNSGKWMPPATGELRPEVW 143

[Close]

BLAST of Spo01398.1 vs. UniProtKB/TrEMBL
Match: W5EHI0_WHEAT (Uncharacterized protein OS=Triticum aestivum PE=4 SV=1)

HSP 1 Score: 274.6 bits (701), Expect = 6.700e-71
Identity = 126/143 (88.11%), Postives = 138/143 (96.50%), Query Frame = 1

		  
Query: 1   MTEAVIRNKPGMASVKDMPLLQDGPPPGGFAPVRYARRIPTKGPSAIAIFLTTFGAFAWG 60
           MTE+++RNKPGMASVKDMP+LQDGPPPGGFAPVRYARRIP KGPSAIA+FLTTFGAF+WG
Sbjct: 1   MTESMVRNKPGMASVKDMPVLQDGPPPGGFAPVRYARRIPNKGPSAIALFLTTFGAFSWG 60

Query: 61  MYQVGEGNKKRRVIKEEKYAARRAILPLLQAEEDERFVKEWKKYLEDEARIMKNVPGWKV 120
           MYQVG+GNK RR +KEEK AAR AILP+LQAEEDERFVKEWKKYLE+EARIMKNVPGWKV
Sbjct: 61  MYQVGQGNKVRRALKEEKIAARSAILPMLQAEEDERFVKEWKKYLEEEARIMKNVPGWKV 120

Query: 121 GENVYNSGRWMPPATGELRPEVW 144
           GE+VYNSG+WMPPATGELRPEVW
Sbjct: 121 GESVYNSGKWMPPATGELRPEVW 143

[Close]

BLAST of Spo01398.1 vs. UniProtKB/TrEMBL
Match: A0A103XHY2_CYNCS (GRIM-19-like protein OS=Cynara cardunculus var. scolymus GN=Ccrd_006935 PE=4 SV=1)

HSP 1 Score: 272.3 bits (695), Expect = 3.300e-70
Identity = 126/143 (88.11%), Postives = 137/143 (95.80%), Query Frame = 1

		  
Query: 1   MTEAVIRNKPGMASVKDMPLLQDGPPPGGFAPVRYARRIPTKGPSAIAIFLTTFGAFAWG 60
           MTEA IRNKPGMASVKDMPLLQDGPPPGGFAPVRYARRIP+KGPSA+AIFL  FG F+WG
Sbjct: 1   MTEAFIRNKPGMASVKDMPLLQDGPPPGGFAPVRYARRIPSKGPSAVAIFLAAFGTFSWG 60

Query: 61  MYQVGEGNKKRRVIKEEKYAARRAILPLLQAEEDERFVKEWKKYLEDEARIMKNVPGWKV 120
           MY+VG+GNK RR IKEEKYAARRAILP+LQAEEDERFVKEWKKYLE+EARIMK+VPGWKV
Sbjct: 61  MYEVGKGNKIRRAIKEEKYAARRAILPMLQAEEDERFVKEWKKYLEEEARIMKDVPGWKV 120

Query: 121 GENVYNSGRWMPPATGELRPEVW 144
           GE+VY+SG+WMPPATGELRPEVW
Sbjct: 121 GESVYHSGKWMPPATGELRPEVW 143

[Close]

BLAST of Spo01398.1 vs. ExPASy Swiss-Prot
Match: NDADB_ARATH (NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 13-B OS=Arabidopsis thaliana GN=At2g33220 PE=2 SV=1)

HSP 1 Score: 263.5 bits (672), Expect = 1.400e-69
Identity = 124/143 (86.71%), Postives = 132/143 (92.31%), Query Frame = 1

		  
Query: 1   MTEAVIRNKPGMASVKDMPLLQDGPPPGGFAPVRYARRIPTKGPSAIAIFLTTFGAFAWG 60
           MTEA+IR KPGMASVKDMPLLQDGPPPGGFAPVRYARRI   GPSA+AIFLT  GAFAWG
Sbjct: 1   MTEAMIRKKPGMASVKDMPLLQDGPPPGGFAPVRYARRISNTGPSAMAIFLTVSGAFAWG 60

Query: 61  MYQVGEGNKKRRVIKEEKYAARRAILPLLQAEEDERFVKEWKKYLEDEARIMKNVPGWKV 120
           MYQVG+GNK RR +KEEKYAARRAILP+LQAEEDERFV EWKKYLE EA +MK+VPGWKV
Sbjct: 61  MYQVGQGNKIRRALKEEKYAARRAILPILQAEEDERFVSEWKKYLEYEADVMKDVPGWKV 120

Query: 121 GENVYNSGRWMPPATGELRPEVW 144
           GENVYNSGRWMPPATGELRP+VW
Sbjct: 121 GENVYNSGRWMPPATGELRPDVW 143

[Close]

BLAST of Spo01398.1 vs. ExPASy Swiss-Prot
Match: NDADA_ARATH (NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 13-A OS=Arabidopsis thaliana GN=MEE4 PE=2 SV=1)

HSP 1 Score: 261.2 bits (666), Expect = 6.900e-69
Identity = 122/143 (85.31%), Postives = 131/143 (91.61%), Query Frame = 1

		  
Query: 1   MTEAVIRNKPGMASVKDMPLLQDGPPPGGFAPVRYARRIPTKGPSAIAIFLTTFGAFAWG 60
           MTEA+IRNKPGMASVKDMPLLQDGPPPGGFAPVRYARRI   GPSA+A+FL   GAFAWG
Sbjct: 1   MTEAMIRNKPGMASVKDMPLLQDGPPPGGFAPVRYARRISNTGPSAMAMFLAVSGAFAWG 60

Query: 61  MYQVGEGNKKRRVIKEEKYAARRAILPLLQAEEDERFVKEWKKYLEDEARIMKNVPGWKV 120
           MYQVG+GNK RR +KEEKYAARR ILP+LQAEEDERFV EWKKYLE EA +MK+VPGWKV
Sbjct: 61  MYQVGQGNKIRRALKEEKYAARRTILPILQAEEDERFVSEWKKYLEYEADVMKDVPGWKV 120

Query: 121 GENVYNSGRWMPPATGELRPEVW 144
           GENVYNSGRWMPPATGELRP+VW
Sbjct: 121 GENVYNSGRWMPPATGELRPDVW 143

[Close]

BLAST of Spo01398.1 vs. ExPASy Swiss-Prot
Match: NDUAD_BOVIN (NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 13 OS=Bos taurus GN=NDUFA13 PE=1 SV=3)

HSP 1 Score: 114.8 bits (286), Expect = 7.900e-25
Identity = 52/117 (44.44%), Postives = 82/117 (70.09%), Query Frame = 1

		  
Query: 22  QDGPPPGGFAPVRYARRIPTKGPSAIAIFLTTFGAFAWGMYQVGEGNKKRRVIKEEKYAA 81
           QD PP GG+ P+ Y R +P +G S  ++F    GA  +G + + + N++RR ++ E + A
Sbjct: 8   QDMPPVGGYGPIDYKRNLPRRGLSGYSMFAVGIGALLFGYWSMMKWNRERRRLQIEDFEA 67

Query: 82  RRAILPLLQAEEDERFVKEWKKYLEDEARIMKNVPGWKVGENVYNSGRWMPPATGEL 139
           R A++PLLQAE+D R ++  ++ LE+EA +MK+VPGWKVGE+V+++ RW+ P  GEL
Sbjct: 68  RIALMPLLQAEKDRRVLQMLRENLEEEATVMKDVPGWKVGESVFHTTRWVTPMMGEL 124

[Close]

BLAST of Spo01398.1 vs. ExPASy Swiss-Prot
Match: NDUAD_GORGO (NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 13 OS=Gorilla gorilla gorilla GN=NDUFA13 PE=2 SV=3)

HSP 1 Score: 114.4 bits (285), Expect = 1.000e-24
Identity = 53/117 (45.30%), Postives = 80/117 (68.38%), Query Frame = 1

		  
Query: 22  QDGPPPGGFAPVRYARRIPTKGPSAIAIFLTTFGAFAWGMYQVGEGNKKRRVIKEEKYAA 81
           QD PPPGG+ P+ Y R +P +G S  ++     G   +G + + + N++RR ++ E + A
Sbjct: 8   QDMPPPGGYGPIDYKRNLPRRGLSGYSMLAIGIGTLIYGHWSIMKWNRERRRLQIEDFEA 67

Query: 82  RRAILPLLQAEEDERFVKEWKKYLEDEARIMKNVPGWKVGENVYNSGRWMPPATGEL 139
           R A+LPLLQAE D R ++  ++ LE+EA IMK+VP WKVGE+V+++ RW+PP  GEL
Sbjct: 68  RIALLPLLQAETDRRTLQMLRENLEEEAIIMKDVPDWKVGESVFHTTRWVPPLIGEL 124

[Close]

BLAST of Spo01398.1 vs. ExPASy Swiss-Prot
Match: NDUAD_HUMAN (NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 13 OS=Homo sapiens GN=NDUFA13 PE=1 SV=3)

HSP 1 Score: 114.4 bits (285), Expect = 1.000e-24
Identity = 53/117 (45.30%), Postives = 80/117 (68.38%), Query Frame = 1

		  
Query: 22  QDGPPPGGFAPVRYARRIPTKGPSAIAIFLTTFGAFAWGMYQVGEGNKKRRVIKEEKYAA 81
           QD PPPGG+ P+ Y R +P +G S  ++     G   +G + + + N++RR ++ E + A
Sbjct: 8   QDMPPPGGYGPIDYKRNLPRRGLSGYSMLAIGIGTLIYGHWSIMKWNRERRRLQIEDFEA 67

Query: 82  RRAILPLLQAEEDERFVKEWKKYLEDEARIMKNVPGWKVGENVYNSGRWMPPATGEL 139
           R A+LPLLQAE D R ++  ++ LE+EA IMK+VP WKVGE+V+++ RW+PP  GEL
Sbjct: 68  RIALLPLLQAETDRRTLQMLRENLEEEAIIMKDVPDWKVGESVFHTTRWVPPLIGEL 124

[Close]

BLAST of Spo01398.1 vs. TAIR (Arabidopsis)
Match: AT2G33220.1 (GRIM-19 protein)

HSP 1 Score: 263.5 bits (672), Expect = 7.800e-71
Identity = 124/143 (86.71%), Postives = 132/143 (92.31%), Query Frame = 1

		  
Query: 1   MTEAVIRNKPGMASVKDMPLLQDGPPPGGFAPVRYARRIPTKGPSAIAIFLTTFGAFAWG 60
           MTEA+IR KPGMASVKDMPLLQDGPPPGGFAPVRYARRI   GPSA+AIFLT  GAFAWG
Sbjct: 1   MTEAMIRKKPGMASVKDMPLLQDGPPPGGFAPVRYARRISNTGPSAMAIFLTVSGAFAWG 60

Query: 61  MYQVGEGNKKRRVIKEEKYAARRAILPLLQAEEDERFVKEWKKYLEDEARIMKNVPGWKV 120
           MYQVG+GNK RR +KEEKYAARRAILP+LQAEEDERFV EWKKYLE EA +MK+VPGWKV
Sbjct: 61  MYQVGQGNKIRRALKEEKYAARRAILPILQAEEDERFVSEWKKYLEYEADVMKDVPGWKV 120

Query: 121 GENVYNSGRWMPPATGELRPEVW 144
           GENVYNSGRWMPPATGELRP+VW
Sbjct: 121 GENVYNSGRWMPPATGELRPDVW 143

[Close]

BLAST of Spo01398.1 vs. TAIR (Arabidopsis)
Match: AT1G04630.1 (GRIM-19 protein)

HSP 1 Score: 261.2 bits (666), Expect = 3.900e-70
Identity = 122/143 (85.31%), Postives = 131/143 (91.61%), Query Frame = 1

		  
Query: 1   MTEAVIRNKPGMASVKDMPLLQDGPPPGGFAPVRYARRIPTKGPSAIAIFLTTFGAFAWG 60
           MTEA+IRNKPGMASVKDMPLLQDGPPPGGFAPVRYARRI   GPSA+A+FL   GAFAWG
Sbjct: 1   MTEAMIRNKPGMASVKDMPLLQDGPPPGGFAPVRYARRISNTGPSAMAMFLAVSGAFAWG 60

Query: 61  MYQVGEGNKKRRVIKEEKYAARRAILPLLQAEEDERFVKEWKKYLEDEARIMKNVPGWKV 120
           MYQVG+GNK RR +KEEKYAARR ILP+LQAEEDERFV EWKKYLE EA +MK+VPGWKV
Sbjct: 61  MYQVGQGNKIRRALKEEKYAARRTILPILQAEEDERFVSEWKKYLEYEADVMKDVPGWKV 120

Query: 121 GENVYNSGRWMPPATGELRPEVW 144
           GENVYNSGRWMPPATGELRP+VW
Sbjct: 121 GENVYNSGRWMPPATGELRPDVW 143

The following BLAST results are available for this feature:

BLAST of Spo01398.1 vs. NCBI nr
BLAST of Spo01398.1 vs. UniProtKB/TrEMBL
BLAST of Spo01398.1 vs. ExPASy Swiss-Prot
BLAST of Spo01398.1 vs. TAIR (Arabidopsis)

BLAST of Spo01398.1 vs. NCBI nr
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. NCBI nr)
Total hits: 5

Position :

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Match Name	E-value	Identity	Description
gi\|902035027\|gb\|KNA02613.1\|	3.6e-78	100.	hypothetical protein SOVF_2169...	[more]
gi\|731376385\|ref\|XP_010667549.1\|	2.6e-76	97.9	PREDICTED: NADH dehydrogenase ...	[more]
gi\|357113641\|ref\|XP_003558610.1\|	3.3e-71	88.8	PREDICTED: NADH dehydrogenase ...	[more]
gi\|1021027428\|gb\|KZM85215.1\|	4.3e-71	89.5	hypothetical protein DCAR_0273...	[more]
gi\|976903131\|gb\|KVH91054.1\|	4.7e-70	88.1	GRIM-19-like protein [Cynara c...	[more]

BLAST of Spo01398.1 vs. UniProtKB/TrEMBL
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. UniprotKB/TrEMBL)
Total hits: 5

Position :

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Match Name	E-value	Identity	Description
A0A0K9Q7H2_SPIOL	2.5e-78	100.	Uncharacterized protein OS=Spi...	[more]
A0A0J8B2F7_BETVU	1.8e-76	97.9	Uncharacterized protein OS=Bet...	[more]
I1H8P9_BRADI	2.3e-71	88.8	Uncharacterized protein OS=Bra...	[more]
W5EHI0_WHEAT	6.7e-71	88.1	Uncharacterized protein OS=Tri...	[more]
A0A103XHY2_CYNCS	3.3e-70	88.1	GRIM-19-like protein OS=Cynara...	[more]

BLAST of Spo01398.1 vs. ExPASy Swiss-Prot
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. ExPASy SwissProt)
Total hits: 5

Position :

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Match Name	E-value	Identity	Description
NDADB_ARATH	1.4e-69	86.7	NADH dehydrogenase [ubiquinone...	[more]
NDADA_ARATH	6.9e-69	85.3	NADH dehydrogenase [ubiquinone...	[more]
NDUAD_BOVIN	7.9e-25	44.4	NADH dehydrogenase [ubiquinone...	[more]
NDUAD_GORGO	1.0e-24	45.3	NADH dehydrogenase [ubiquinone...	[more]
NDUAD_HUMAN	1.0e-24	45.3	NADH dehydrogenase [ubiquinone...	[more]

BLAST of Spo01398.1 vs. TAIR (Arabidopsis)
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. TAIR)
Total hits: 2

Position :

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Match Name	E-value	Identity	Description
AT2G33220.1	7.8e-71	86.7	GRIM-19 protein	[more]
AT1G04630.1	3.9e-70	85.3	GRIM-19 protein	[more]

InterPro

Analysis Name: InterPro Annotations of S. oleracea
Date Performed: 2018-06-29

Position :

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IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR009346	GRIM-19	PANTHER	PTHR12966	NADH DEHYDROGENASE UBIQUINONE 1 ALPHA SUBCOMPLEX SUBUNIT 13	coord: 14..140 score: 3.2
IPR009346	GRIM-19	PFAM	PF06212	GRIM-19	coord: 20..138 score: 8.5

GO Annotation

GO Assignments

This mRNA is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0009793	embryo development ending in seed dormancy
biological_process	GO:0055114	oxidation-reduction process
biological_process	GO:0009853	photorespiration
cellular_component	GO:0016021	integral component of membrane
cellular_component	GO:0005747	mitochondrial respiratory chain complex I