Spo13877.1 (mRNA) | SpinachBase

Overview


Name	Spo13877.1
Type	mRNA
Organism	Spinacia oleracea (Spinach)
Description	Putative mitochondrial outer membrane protein porin-like (Voltage-dependent anion-selective channel protein-like)
Location	SpoScf_17559 : 106 .. 813 (+)
Sequence length	318

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

GCTATCACTTCTACTGGGACAAAGAAGGGCGAGTTGTTTTTGGCTGATGTCAGCACTAAGTTGACAAACAAGAATATTACCACCGATGTGAAAGTTGATACCAACTCCAATGTGAGTTTGTTTATTTGTATTACTACGAATTGATTCTATGATACATTACGGTTTCATTGGTTTATAGGTTTTTATAATTGGTAATTGTGTAAAATTTGGTGACAGATAGCATTGCTTTCTATGAACATCTTGTTTTACATAATTGGAATCTATTGTAATCTGATTCCAACTTCTTTGCTGTTTCCGTCTTCCGCTCCTAGCTTTTCACCACCATTACGTTGATGAACCTGCCCCTGGCTTGAAGGCTATTTTTAGTTTCCGTGTTCCTGATCANAGATCTGGCAAGGTACCATACAATTATCTTTCTAGTATTTTCTTACCTAAAGAGGCATGGTTCAAGATACTACGGGATAATGGTTCTAATTTGTGTAGTATAAATTATGTTAACAGGTTGAGCTTCAGTATTTGCATGAGTATGCTGGCATCAGCACAAGCCTTGGTTTGACAGCAAACCCCATTGTCAACTTTTCTGGTGTTTTTGGAAACAGTACTCTTGCTTTGGGTACTGACCTCTCATTTGACACTACTTCTGGAAACTTCACCAAATGCAATGCTGGGCTGAGCTTTACTAATGATGATCTCATTGCATCTGTGAAT

mRNA sequence

GCTATCACTTCTACTGGGACAAAGAAGGGCGAGTTGTTTTTGGCTGATGTCAGCACTAAGTTGACAAACAAGAATATTACCACCGATGTGAAAGTTGATACCAACTCCAATGTTGAGCTTCAGTATTTGCATGAGTATGCTGGCATCAGCACAAGCCTTGGTTTGACAGCAAACCCCATTGTCAACTTTTCTGGTGTTTTTGGAAACAGTACTCTTGCTTTGGGTACTGACCTCTCATTTGACACTACTTCTGGAAACTTCACCAAATGCAATGCTGGGCTGAGCTTTACTAATGATGATCTCATTGCATCTGTGAAT

Coding sequence (CDS)

GCTATCACTTCTACTGGGACAAAGAAGGGCGAGTTGTTTTTGGCTGATGTCAGCACTAAGTTGACAAACAAGAATATTACCACCGATGTGAAAGTTGATACCAACTCCAATGTTGAGCTTCAGTATTTGCATGAGTATGCTGGCATCAGCACAAGCCTTGGTTTGACAGCAAACCCCATTGTCAACTTTTCTGGTGTTTTTGGAAACAGTACTCTTGCTTTGGGTACTGACCTCTCATTTGACACTACTTCTGGAAACTTCACCAAATGCAATGCTGGGCTGAGCTTTACTAATGATGATCTCATTGCATCTGTGAAT

Protein sequence

AITSTGTKKGELFLADVSTKLTNKNITTDVKVDTNSNVELQYLHEYAGISTSLGLTANPIVNFSGVFGNSTLALGTDLSFDTTSGNFTKCNAGLSFTNDDLIASVN

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
Spo13877	Spo13877	gene

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
Spo13877.1	Spo13877.1-protein	polypeptide

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Spo13877.1.exon.1	Spo13877.1.exon.1	exon
Spo13877.1.exon.2	Spo13877.1.exon.2	exon

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Spo13877.1.CDS.1	Spo13877.1.CDS.1	CDS
Spo13877.1.CDS.2	Spo13877.1.CDS.2	CDS

Homology

[Close]

BLAST of Spo13877.1 vs. NCBI nr
Match: gi|1256259|gb|AAA96275.1| (voltage-dependent anion channel protein [Spinacia oleracea])

HSP 1 Score: 186.4 bits (472), Expect = 2.500e-44
Identity = 105/135 (77.78%), Postives = 105/135 (77.78%), Query Frame = 1

		  
Query: 1   AITSTGTKKGELFLADVSTKLTNKNITTDVKVDTNSN----------------------- 60
           AITSTGTKKGELFLADVSTKLTNKNITTDVKVDTNSN                       
Sbjct: 40  AITSTGTKKGELFLADVSTKLTNKNITTDVKVDTNSNLFTTITVDEPAPGLKAIFSFRVP 99

Query: 61  ------VELQYLHEYAGISTSLGLTANPIVNFSGVFGNSTLALGTDLSFDTTSGNFTKCN 107
                 VELQYLHEYAGISTSLGLTANPIVNFSGVFGNSTLALGTDLSFDT SGNFTKCN
Sbjct: 100 DQRSGKVELQYLHEYAGISTSLGLTANPIVNFSGVFGNSTLALGTDLSFDTASGNFTKCN 159

[Close]

BLAST of Spo13877.1 vs. NCBI nr
Match: gi|731344143|ref|XP_010683253.1| (PREDICTED: mitochondrial outer membrane protein porin of 36 kDa [Beta vulgaris subsp. vulgaris])

HSP 1 Score: 179.1 bits (453), Expect = 4.100e-42
Identity = 101/135 (74.81%), Postives = 103/135 (76.30%), Query Frame = 1

		  
Query: 1   AITSTGTKKGELFLADVSTKLTNKNITTDVKVDTNSN----------------------- 60
           AITSTGTKKGELFLADVSTKLTNKNITTDVKVDTNSN                       
Sbjct: 40  AITSTGTKKGELFLADVSTKLTNKNITTDVKVDTNSNLFTTITVDEPAPGLKAIFSFRVP 99

Query: 61  ------VELQYLHEYAGISTSLGLTANPIVNFSGVFGNSTLALGTDLSFDTTSGNFTKCN 107
                 VELQYLHEYAGISTSLGLTANPIVNFSGV GNSTLALGTDLSFDT SGNFTKCN
Sbjct: 100 DQRSGKVELQYLHEYAGISTSLGLTANPIVNFSGVIGNSTLALGTDLSFDTASGNFTKCN 159

[Close]

BLAST of Spo13877.1 vs. NCBI nr
Match: gi|702421950|ref|XP_010066951.1| (PREDICTED: mitochondrial outer membrane protein porin of 36 kDa [Eucalyptus grandis])

HSP 1 Score: 163.3 bits (412), Expect = 2.300e-37
Identity = 92/134 (68.66%), Postives = 97/134 (72.39%), Query Frame = 1

		  
Query: 1   AITSTGTKKGELFLADVSTKLTNKNITTDVKVDTNSN----------------------- 60
           A+TSTG KKGE FLADVST+L NKNITTDVKVDTNSN                       
Sbjct: 40  ALTSTGIKKGEFFLADVSTQLKNKNITTDVKVDTNSNLLTTITVDEPAPGLKTIFSFIVP 99

Query: 61  ------VELQYLHEYAGISTSLGLTANPIVNFSGVFGNSTLALGTDLSFDTTSGNFTKCN 106
                 VELQY HEYAGISTS+GLTANPIVNFSGV GN+ LALGTDLSFDT SGNFTKCN
Sbjct: 100 DQRSGKVELQYQHEYAGISTSIGLTANPIVNFSGVVGNNLLALGTDLSFDTASGNFTKCN 159

[Close]

BLAST of Spo13877.1 vs. NCBI nr
Match: gi|225424908|ref|XP_002276636.1| (PREDICTED: mitochondrial outer membrane protein porin of 36 kDa [Vitis vinifera])

HSP 1 Score: 161.8 bits (408), Expect = 6.700e-37
Identity = 89/134 (66.42%), Postives = 100/134 (74.63%), Query Frame = 1

		  
Query: 1   AITSTGTKKGELFLADVSTKLTNKNITTDVKVDTNSN----------------------- 60
           AITS+GTKKGELF+ADV+T+L NKNITTDVKVDTNSN                       
Sbjct: 40  AITSSGTKKGELFIADVNTQLKNKNITTDVKVDTNSNLFTTITVDEPAPGLKTIFSFIIP 99

Query: 61  ------VELQYLHEYAGISTSLGLTANPIVNFSGVFGNSTLALGTDLSFDTTSGNFTKCN 106
                 VELQYLHEYAGISTS+GLTANPIVNFSGV GN+TL+LGTDLSFDT +GNFTKCN
Sbjct: 100 DQRSGKVELQYLHEYAGISTSIGLTANPIVNFSGVVGNNTLSLGTDLSFDTATGNFTKCN 159

[Close]

BLAST of Spo13877.1 vs. NCBI nr
Match: gi|296086428|emb|CBI32017.3| (unnamed protein product [Vitis vinifera])

HSP 1 Score: 161.8 bits (408), Expect = 6.700e-37
Identity = 89/134 (66.42%), Postives = 100/134 (74.63%), Query Frame = 1

		  
Query: 1   AITSTGTKKGELFLADVSTKLTNKNITTDVKVDTNSN----------------------- 60
           AITS+GTKKGELF+ADV+T+L NKNITTDVKVDTNSN                       
Sbjct: 40  AITSSGTKKGELFIADVNTQLKNKNITTDVKVDTNSNLFTTITVDEPAPGLKTIFSFIIP 99

Query: 61  ------VELQYLHEYAGISTSLGLTANPIVNFSGVFGNSTLALGTDLSFDTTSGNFTKCN 106
                 VELQYLHEYAGISTS+GLTANPIVNFSGV GN+TL+LGTDLSFDT +GNFTKCN
Sbjct: 100 DQRSGKVELQYLHEYAGISTSIGLTANPIVNFSGVVGNNTLSLGTDLSFDTATGNFTKCN 159

[Close]

BLAST of Spo13877.1 vs. UniProtKB/TrEMBL
Match: Q41368_SPIOL (Uncharacterized protein OS=Spinacia oleracea GN=SVDAC1 PE=2 SV=1)

HSP 1 Score: 186.4 bits (472), Expect = 1.800e-44
Identity = 105/135 (77.78%), Postives = 105/135 (77.78%), Query Frame = 1

		  
Query: 1   AITSTGTKKGELFLADVSTKLTNKNITTDVKVDTNSN----------------------- 60
           AITSTGTKKGELFLADVSTKLTNKNITTDVKVDTNSN                       
Sbjct: 40  AITSTGTKKGELFLADVSTKLTNKNITTDVKVDTNSNLFTTITVDEPAPGLKAIFSFRVP 99

Query: 61  ------VELQYLHEYAGISTSLGLTANPIVNFSGVFGNSTLALGTDLSFDTTSGNFTKCN 107
                 VELQYLHEYAGISTSLGLTANPIVNFSGVFGNSTLALGTDLSFDT SGNFTKCN
Sbjct: 100 DQRSGKVELQYLHEYAGISTSLGLTANPIVNFSGVFGNSTLALGTDLSFDTASGNFTKCN 159

[Close]

BLAST of Spo13877.1 vs. UniProtKB/TrEMBL
Match: A0A0J8C4I7_BETVU (Uncharacterized protein OS=Beta vulgaris subsp. vulgaris GN=BVRB_6g154570 PE=4 SV=1)

HSP 1 Score: 179.1 bits (453), Expect = 2.800e-42
Identity = 101/135 (74.81%), Postives = 103/135 (76.30%), Query Frame = 1

		  
Query: 1   AITSTGTKKGELFLADVSTKLTNKNITTDVKVDTNSN----------------------- 60
           AITSTGTKKGELFLADVSTKLTNKNITTDVKVDTNSN                       
Sbjct: 40  AITSTGTKKGELFLADVSTKLTNKNITTDVKVDTNSNLFTTITVDEPAPGLKAIFSFRVP 99

Query: 61  ------VELQYLHEYAGISTSLGLTANPIVNFSGVFGNSTLALGTDLSFDTTSGNFTKCN 107
                 VELQYLHEYAGISTSLGLTANPIVNFSGV GNSTLALGTDLSFDT SGNFTKCN
Sbjct: 100 DQRSGKVELQYLHEYAGISTSLGLTANPIVNFSGVIGNSTLALGTDLSFDTASGNFTKCN 159

[Close]

BLAST of Spo13877.1 vs. UniProtKB/TrEMBL
Match: A0A059BGL5_EUCGR (Uncharacterized protein OS=Eucalyptus grandis GN=EUGRSUZ_G02544 PE=4 SV=1)

HSP 1 Score: 163.3 bits (412), Expect = 1.600e-37
Identity = 92/134 (68.66%), Postives = 97/134 (72.39%), Query Frame = 1

		  
Query: 1   AITSTGTKKGELFLADVSTKLTNKNITTDVKVDTNSN----------------------- 60
           A+TSTG KKGE FLADVST+L NKNITTDVKVDTNSN                       
Sbjct: 40  ALTSTGIKKGEFFLADVSTQLKNKNITTDVKVDTNSNLLTTITVDEPAPGLKTIFSFIVP 99

Query: 61  ------VELQYLHEYAGISTSLGLTANPIVNFSGVFGNSTLALGTDLSFDTTSGNFTKCN 106
                 VELQY HEYAGISTS+GLTANPIVNFSGV GN+ LALGTDLSFDT SGNFTKCN
Sbjct: 100 DQRSGKVELQYQHEYAGISTSIGLTANPIVNFSGVVGNNLLALGTDLSFDTASGNFTKCN 159

[Close]

BLAST of Spo13877.1 vs. UniProtKB/TrEMBL
Match: F6HPF2_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_01s0026g01650 PE=4 SV=1)

HSP 1 Score: 161.8 bits (408), Expect = 4.700e-37
Identity = 89/134 (66.42%), Postives = 100/134 (74.63%), Query Frame = 1

		  
Query: 1   AITSTGTKKGELFLADVSTKLTNKNITTDVKVDTNSN----------------------- 60
           AITS+GTKKGELF+ADV+T+L NKNITTDVKVDTNSN                       
Sbjct: 40  AITSSGTKKGELFIADVNTQLKNKNITTDVKVDTNSNLFTTITVDEPAPGLKTIFSFIIP 99

Query: 61  ------VELQYLHEYAGISTSLGLTANPIVNFSGVFGNSTLALGTDLSFDTTSGNFTKCN 106
                 VELQYLHEYAGISTS+GLTANPIVNFSGV GN+TL+LGTDLSFDT +GNFTKCN
Sbjct: 100 DQRSGKVELQYLHEYAGISTSIGLTANPIVNFSGVVGNNTLSLGTDLSFDTATGNFTKCN 159

[Close]

BLAST of Spo13877.1 vs. UniProtKB/TrEMBL
Match: A9P802_POPTR (Porin family protein OS=Populus trichocarpa GN=POPTR_0010s04240g PE=2 SV=1)

HSP 1 Score: 159.5 bits (402), Expect = 2.300e-36
Identity = 89/134 (66.42%), Postives = 98/134 (73.13%), Query Frame = 1

		  
Query: 1   AITSTGTKKGELFLADVSTKLTNKNITTDVKVDTNSN----------------------- 60
           AITSTG KKGELFLAD+S++L NKNITTDVKVDTNSN                       
Sbjct: 40  AITSTGIKKGELFLADISSQLKNKNITTDVKVDTNSNLLTTITIDEPAPGLKTIFSFKVP 99

Query: 61  ------VELQYLHEYAGISTSLGLTANPIVNFSGVFGNSTLALGTDLSFDTTSGNFTKCN 106
                 VELQY HEYAGISTSLGLTANPIVNFSGV G++ +ALGTDLSFDT +GNFTKCN
Sbjct: 100 DQRSGKVELQYQHEYAGISTSLGLTANPIVNFSGVVGSNVVALGTDLSFDTATGNFTKCN 159

[Close]

BLAST of Spo13877.1 vs. ExPASy Swiss-Prot
Match: VDAC2_SOLTU (Mitochondrial outer membrane protein porin of 36 kDa OS=Solanum tuberosum PE=1 SV=2)

HSP 1 Score: 157.5 bits (397), Expect = 7.900e-38
Identity = 87/134 (64.93%), Postives = 100/134 (74.63%), Query Frame = 1

		  
Query: 1   AITSTGTKKGELFLADVSTKLTNKNITTDVKVDTNSNV---------------------- 60
           AIT++G KKGELFLADVST+L NKNITTDVKVDTNSNV                      
Sbjct: 40  AITASGLKKGELFLADVSTQLKNKNITTDVKVDTNSNVYTTITVDEPAPGLKTIFSFVVP 99

Query: 61  -------ELQYLHEYAGISTSLGLTANPIVNFSGVFGNSTLALGTDLSFDTTSGNFTKCN 106
                  ELQYLHEYAGI+TS+GLTA+P+VNFSGV GN+T+ALGTDLSFDT +GNFTKCN
Sbjct: 100 DQKSGKVELQYLHEYAGINTSIGLTASPLVNFSGVAGNNTVALGTDLSFDTATGNFTKCN 159

[Close]

BLAST of Spo13877.1 vs. ExPASy Swiss-Prot
Match: VDAC1_SOLTU (Mitochondrial outer membrane protein porin of 34 kDa OS=Solanum tuberosum PE=1 SV=2)

HSP 1 Score: 149.8 bits (377), Expect = 1.600e-35
Identity = 80/134 (59.70%), Postives = 98/134 (73.13%), Query Frame = 1

		  
Query: 2   ITSTGTKKGELFLADVSTKLTNKNITTDVKVDTNSNV----------------------- 61
           ITS+G+KKG+LFLADV+T+L NKN+TTD+KVDTNSN+                       
Sbjct: 41  ITSSGSKKGDLFLADVNTQLKNKNVTTDIKVDTNSNLFTTITVDEAAPGLKTILSFRVPD 100

Query: 62  ------ELQYLHEYAGISTSLGLTANPIVNFSGVFGNSTLALGTDLSFDTTSGNFTKCNA 107
                 E+QYLH+YAGI TS+GLTANPIVNFSGV G + +ALGTD+SFDT +G+FTKCNA
Sbjct: 101 QRSGKLEVQYLHDYAGICTSVGLTANPIVNFSGVVGTNIIALGTDVSFDTKTGDFTKCNA 160

[Close]

BLAST of Spo13877.1 vs. ExPASy Swiss-Prot
Match: VDAC_PEA (Outer plastidial membrane protein porin OS=Pisum sativum GN=POR1 PE=1 SV=2)

HSP 1 Score: 134.0 bits (336), Expect = 9.400e-31
Identity = 76/134 (56.72%), Postives = 87/134 (64.93%), Query Frame = 1

		  
Query: 1   AITSTGTKKGELFLADVSTKLTNKNITTDVKVDTNSN----------------------- 60
           AITS+GTKKGELFL DV+T+L NKNITTD+KVDTNSN                       
Sbjct: 40  AITSSGTKKGELFLGDVNTQLKNKNITTDIKVDTNSNLFTTITVNEPAPGVKAILSFKVP 99

Query: 61  ------VELQYLHEYAGISTSLGLTANPIVNFSGVFGNSTLALGTDLSFDTTSGNFTKCN 106
                 VELQYLHEYAGIS+S+GL ANPIVNFS V G + LA G D+SFDT  G  TK N
Sbjct: 100 EQTSGKVELQYLHEYAGISSSVGLKANPIVNFSSVIGTNALAFGADISFDTKLGELTKSN 159

[Close]

BLAST of Spo13877.1 vs. ExPASy Swiss-Prot
Match: VDAC1_ARATH (Mitochondrial outer membrane protein porin 1 OS=Arabidopsis thaliana GN=VDAC1 PE=1 SV=3)

HSP 1 Score: 133.7 bits (335), Expect = 1.200e-30
Identity = 79/134 (58.96%), Postives = 90/134 (67.16%), Query Frame = 1

		  
Query: 1   AITSTGTKKGELFLADVSTKLTNKNITTDVKV---------------------------- 60
           AITSTGTKKG+L L DV+ +   KNITTD+KV                            
Sbjct: 40  AITSTGTKKGDLLLGDVAFQSRRKNITTDLKVCTDSTFLITATVDEAAPGLRSIFSFKVP 99

Query: 61  DTNSN-VELQYLHEYAGISTSLGLTANPIVNFSGVFGNSTLALGTDLSFDTTSGNFTKCN 106
           D NS  VELQYLHEYAGISTS+GLT NP VNFSGV G++ LA+GTD+SFDT SGNFTK N
Sbjct: 100 DQNSGKVELQYLHEYAGISTSMGLTQNPTVNFSGVIGSNVLAVGTDVSFDTKSGNFTKIN 159

[Close]

BLAST of Spo13877.1 vs. ExPASy Swiss-Prot
Match: VDAC1_ORYSJ (Mitochondrial outer membrane protein porin 1 OS=Oryza sativa subsp. japonica GN=VDAC1 PE=1 SV=3)

HSP 1 Score: 119.4 bits (298), Expect = 2.400e-26
Identity = 65/135 (48.15%), Postives = 85/135 (62.96%), Query Frame = 1

		  
Query: 1   AITSTGTKKGELFLADVSTKLTNKNITTDVKVDTNSNV---------------------- 60
           AIT+T TKK +L   ++ +++ NKNIT DVK +++SNV                      
Sbjct: 39  AITATSTKKADLIFGEIQSQIKNKNITVDVKANSDSNVVTTVTVDELTPGLKSILSFAVP 98

Query: 61  -------ELQYLHEYAGISTSLGLTANPIVNFSGVFGNSTLALGTDLSFDTTSGNFTKCN 107
                  ELQY H+YAG+S S+GLTA+P+VN S VFG   LA+G D+S DT +GN TK N
Sbjct: 99  DQRSGKFELQYSHDYAGVSASIGLTASPVVNLSSVFGTKALAVGADVSLDTATGNLTKYN 158

[Close]

BLAST of Spo13877.1 vs. TAIR (Arabidopsis)
Match: AT3G01280.1 (voltage dependent anion channel 1)

HSP 1 Score: 133.7 bits (335), Expect = 6.900e-32
Identity = 79/134 (58.96%), Postives = 90/134 (67.16%), Query Frame = 1

		  
Query: 1   AITSTGTKKGELFLADVSTKLTNKNITTDVKV---------------------------- 60
           AITSTGTKKG+L L DV+ +   KNITTD+KV                            
Sbjct: 40  AITSTGTKKGDLLLGDVAFQSRRKNITTDLKVCTDSTFLITATVDEAAPGLRSIFSFKVP 99

Query: 61  DTNSN-VELQYLHEYAGISTSLGLTANPIVNFSGVFGNSTLALGTDLSFDTTSGNFTKCN 106
           D NS  VELQYLHEYAGISTS+GLT NP VNFSGV G++ LA+GTD+SFDT SGNFTK N
Sbjct: 100 DQNSGKVELQYLHEYAGISTSMGLTQNPTVNFSGVIGSNVLAVGTDVSFDTKSGNFTKIN 159

[Close]

BLAST of Spo13877.1 vs. TAIR (Arabidopsis)
Match: AT5G15090.1 (voltage dependent anion channel 3)

HSP 1 Score: 117.5 bits (293), Expect = 5.100e-27
Identity = 66/134 (49.25%), Postives = 84/134 (62.69%), Query Frame = 1

		  
Query: 1   AITSTGTKKGELFLADVSTKLTNKNITTDVKVDTNSNV---------------------- 60
           AIT+TGT KG LFL DV+T++ N N T DVKV T+S++                      
Sbjct: 40  AITTTGTNKGSLFLGDVATQVKNNNFTADVKVSTDSSLLTTLTFDEPAPGLKVIVQAKLP 99

Query: 61  -------ELQYLHEYAGISTSLGLTANPIVNFSGVFGNSTLALGTDLSFDTTSGNFTKCN 106
                  E+QY H+YAGISTS+G TA PIVNFSGV G + L+LGTD++++T SGNF   N
Sbjct: 100 DHKSGKAEVQYFHDYAGISTSVGFTATPIVNFSGVVGTNGLSLGTDVAYNTESGNFKHFN 159

[Close]

BLAST of Spo13877.1 vs. TAIR (Arabidopsis)
Match: AT5G67500.2 (voltage dependent anion channel 2)

HSP 1 Score: 75.1 bits (183), Expect = 2.900e-14
Identity = 44/134 (32.84%), Postives = 68/134 (50.75%), Query Frame = 1

		  
Query: 1   AITSTGTKKGELFLADVSTKLTNKNITTDVKVDTNSNV---------------------- 60
           A+TST  KKG +  ADV+T+   KN   DVK+DT+S+V                      
Sbjct: 67  ALTSTALKKGGVHAADVATQYKYKNALFDVKIDTDSSVLTTVTLTEILPSTKAIASFKVP 126

Query: 61  -------ELQYLHEYAGISTSLGLTANPIVNFSGVFGNSTLALGTDLSFDTTSGNFTKCN 106
                  E+QY H++A ++ +  L  NP+++ +   G+  ++ G +  +DTTS  FTK N
Sbjct: 127 DYNSAKLEVQYFHDHATVTAAAALKQNPLIDITATLGSPVISFGAEAGYDTTSKTFTKYN 186

[Close]

BLAST of Spo13877.1 vs. TAIR (Arabidopsis)
Match: AT5G57490.1 (voltage dependent anion channel 4)

HSP 1 Score: 70.9 bits (172), Expect = 5.500e-13
Identity = 39/131 (29.77%), Postives = 68/131 (51.91%), Query Frame = 1

		  
Query: 4   STGTKKGELFLADVSTKLTNKNITTDVKVDTNSNV------------------------- 63
           +TG KK + F  D+ST    +N   D+K+D++S+V                         
Sbjct: 43  ATGLKKDDFFFGDISTLYKGQNTIVDLKIDSHSSVSTKVTLKNLLPSAKAVISFKIPDHK 102

Query: 64  ----ELQYLHEYAGISTSLGLTANPIVNFSGVFGNSTLALGTDLSFDTTSGNFTKCNAGL 106
               ++QY+H +A +++S+GL   P+++ S   G+  + LG ++SFDT S + TK NAG+
Sbjct: 103 SGKLDVQYVHPHATLNSSIGLNPTPLLDLSATIGSQNVCLGGEVSFDTASSSLTKYNAGI 162

The following BLAST results are available for this feature:

BLAST of Spo13877.1 vs. NCBI nr
BLAST of Spo13877.1 vs. UniProtKB/TrEMBL
BLAST of Spo13877.1 vs. ExPASy Swiss-Prot
BLAST of Spo13877.1 vs. TAIR (Arabidopsis)

BLAST of Spo13877.1 vs. NCBI nr
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. NCBI nr)
Total hits: 5

Position :

Zoom :

x 1


Match Name	E-value	Identity	Description
gi\|1256259\|gb\|AAA96275.1\|	2.5e-44	77.7	voltage-dependent anion channe...	[more]
gi\|731344143\|ref\|XP_010683253.1\|	4.1e-42	74.8	PREDICTED: mitochondrial outer...	[more]
gi\|702421950\|ref\|XP_010066951.1\|	2.3e-37	68.6	PREDICTED: mitochondrial outer...	[more]
gi\|225424908\|ref\|XP_002276636.1\|	6.7e-37	66.4	PREDICTED: mitochondrial outer...	[more]
gi\|296086428\|emb\|CBI32017.3\|	6.7e-37	66.4	unnamed protein product [Vitis...	[more]

BLAST of Spo13877.1 vs. UniProtKB/TrEMBL
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. UniprotKB/TrEMBL)
Total hits: 5

Position :

Zoom :

x 1


Match Name	E-value	Identity	Description
Q41368_SPIOL	1.8e-44	77.7	Uncharacterized protein OS=Spi...	[more]
A0A0J8C4I7_BETVU	2.8e-42	74.8	Uncharacterized protein OS=Bet...	[more]
A0A059BGL5_EUCGR	1.6e-37	68.6	Uncharacterized protein OS=Euc...	[more]
F6HPF2_VITVI	4.7e-37	66.4	Putative uncharacterized prote...	[more]
A9P802_POPTR	2.3e-36	66.4	Porin family protein OS=Populu...	[more]

BLAST of Spo13877.1 vs. ExPASy Swiss-Prot
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. ExPASy SwissProt)
Total hits: 5

Position :

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Match Name	E-value	Identity	Description
VDAC2_SOLTU	7.9e-38	64.9	Mitochondrial outer membrane p...	[more]
VDAC1_SOLTU	1.6e-35	59.7	Mitochondrial outer membrane p...	[more]
VDAC_PEA	9.4e-31	56.7	Outer plastidial membrane prot...	[more]
VDAC1_ARATH	1.2e-30	58.9	Mitochondrial outer membrane p...	[more]
VDAC1_ORYSJ	2.4e-26	48.1	Mitochondrial outer membrane p...	[more]

BLAST of Spo13877.1 vs. TAIR (Arabidopsis)
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. TAIR)
Total hits: 4

Position :

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Match Name	E-value	Identity	Description
AT3G01280.1	6.9e-32	58.9	voltage dependent anion channe...	[more]
AT5G15090.1	5.1e-27	49.2	voltage dependent anion channe...	[more]
AT5G67500.2	2.9e-14	32.8	voltage dependent anion channe...	[more]
AT5G57490.1	5.5e-13	29.7	voltage dependent anion channe...	[more]

InterPro

Analysis Name: InterPro Annotations of S. oleracea
Date Performed: 2018-06-29

Position :

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IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR023614	Porin domain	GENE3D	2.40.160.10		coord: 35..106 score: 5.6
IPR027246	Eukaryotic porin/Tom40	PFAM	PF01459	Porin_3	coord: 26..105 score: 4.9
None	No IPR available	PANTHER	PTHR11743	VOLTAGE-DEPENDENT ANION-SELECTIVE CHANNEL	coord: 1..105 score: 4.9
None	No IPR available	PANTHER	PTHR11743:SF31	SUBFAMILY NOT NAMED	coord: 1..105 score: 4.9

GO Annotation

GO Assignments

This mRNA is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0055085	transmembrane transport
biological_process	GO:0006820	anion transport
cellular_component	GO:0005741	mitochondrial outer membrane
cellular_component	GO:0016021	integral component of membrane
molecular_function	GO:0015267	channel activity