Spo17989.1 (mRNA) | SpinachBase

Overview


Name	Spo17989.1
Type	mRNA
Organism	Spinacia oleracea (Spinach)
Description	Unknown protein
Location	Super_scaffold_101 : 910838 .. 916735 (-)
Sequence length	726

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDSexon

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGCTGAAAACCGCTGAAAAGACGCTCAAGCAAGAGATTAAGCACGATATGCTTATGGTGCGTAAGGGCAAGAACTTCAAGAAATCGAGCAAGAATAAGGGCAAGAAGGGTAAGGGCAAGGCTACGCCCTCATCCAAGTCCAACGGCACCAGTTCTGGTAAACAGAAAAGGGTGACTCGTTCTCCTGTCGACTTTGAATGCTTCTACTGCAGGAAGAAGGGGCATTGGAAGAGGGATTGCTTGAAGAAGAAGGAAGATGAGAAGAACGGGAACGTTGCTTCTACTTCAGGTATATATATGTTATACATTGTAATCTTGCTAATTCTACTTCTTGGGTATTAGATACTGGTTGTGGCTCACACTTATGTTCCAATTCGCAGGGACTAAGGAGAAGTAGAAAGCTTGATAAAGGCGAGATGGATCTACGCGTGGGAAATGGAGCACGGATTGCTGCATTAGCCGTAGGATCTTATTTTATTTCTTTGCCTAGTGGGTTTGTTTTGGAACTAGAAAACTGTTACTATGTTCCTAGTATCACCAGAAACATCATTTCCGTTTAAAGTTTGGATTCTAAAGGTTTTAGTTTTCAATTTAAAGACAATAGTTGTTCTTTTCCTTTGAATGGAATGTTTTATGGTTCAGCACAACAAGAAAACAGTCTTTATGTGCTAGATACGAGCAAACACATTTATAACATAAATACCAAAAAGTCTAAAACTGGTGATTCGGATCTCACATTTCTGTGGCATTGTCGATTAGGCCATATAAACATAAAGCGCATGGAATTACTTCAACGGAAATGAATTCTAGAATCATTCGACTTAGAGAAGATTGATCAATGCGAATCTTGTTTACTTGGCAAAATGACAAAGAAACCTTTCTCAAAGGTGGGAGAAAGAGCAAGCGAACTACTAGGGCTAATACATACGGACGTATGTGGGCCTATCACTAGAGGAAAAATCGTCATGTGCTTCCCTTCAAGTGCGGCTCATTTAGTGAATTGGCAGCACTTGAGAGCATGAAAAATAAAAGAAAAAATACATTTTCACAAGTGCGGGCTAATTTTACAAAAGCCACACATAATATTTCTAAATTATTGCAAAAAAAGGAAAATATTTCTAAAATCAGAGAATCTCTCTCCTCGATTCTTCTCCCTCTTCCTCTTCAGCTTCAGCTTCGTTTTCTCTCTCCTCTGTCGTCGCCGTCGCTTCTTCACCGCCGGAGATCGATATCCCCCACCTCCGTTGATCTCTACCCTCTTCCAGATCAGACTAATTCAGGTTTGTTCATCGAATTTTTTTTTTCTGGTTATTTTTGGCGATTTTTCCCTTCAATCCTCCGCCCTAATCAATTTCTTTACTCCAATTTCCTGGACATTGGAGGACCTCTCATTTTTCGTTAATTATCCATTTTTATGCAAATCTAGGGTTGATGAACTACTTGCTTGTTGCAATTTTCTTTCTCAATTGCCAGATTTACAAAATTGAAGAAGTTTATTTTTGGGGTTTTGTTCTGTTTTGTTGTTTGTTGATGTATGAATTCAAAGCTTAGACAAACCAATTAAATGATGTAAAGGACTGGACGATAAAGCATACCGCCTGACCATCCAGAGTTGAATGTAGCCTCCCTCAAACATGTACGTTGTTCAGAATTTATAAAAAGGCAGTTATATAATGGCTACAAAATGCTCAAGGTACATTTTATCAGACACACAGTTTATGATGATAAGATGATAACAGCATCAAGTATCACACAGTCAGCAGTGTGTGTCTGGTCATAACAGGGACAAACTTGCTGTAAATCACTTGTTTAGGAGGGGGAGTAGTGACGTATGTCAGTTTTAGCTTGAGTAGAAACCGGGAGGTAGATTCTGGAAATTCTAGCGGAGCTGCAAGTGGTTATAGCAGTCTAGTTTGAACTTTAGATAGTGTAATTCCAGGAAAGAGTTGGCAGAAAATGTAAGGAAAATTTCAAACTATAATCCCAACTATGGATAGTCTTCCCACAATAATCCCAAGTATGTGTTATCCCACAGAAATCAGAACTATGTGAGTTGTATTCCCAAAATAAAATCCGGTGTGACTAGTTACCTGGTTAACCAGTTAGCTGACTCCTTTTTTCCATTTTCGCTTTTGTTCTAGTTTGCTGCCAACTAAAATGTCTCGTTCTTAAATTCATTGTATTATGTTGATCAGTGGTGCTTTTGTCATGCAGTAAAAATAATCAGTAATTTTAGTTACTGGGAACATGTTGCTCTTTTCTGTTGAAAAATCTGATCTTTCTTTTTCAACTTAGGCTAGTGTTATTTCTCTATATGTTGTTTCATGTGCAGTTTGTTTAGAATTGCAGAAAAATTCACTGATTGTTCATTCACATAGCTAAGAGATTGTCTCTTGGACTCTGAAATCCAACAACATTCCTTGCAGGCCACTGTTAGCGTACAACTGTGATAACTCTTTGAAAGGCCTTATATTTATTGCCGGGTGAGTCACCAGGATTCTTTTCATCCTTGGAAGTATGCAACTTGATTGTTTAATATTATTATGTAGTTTATAACTGTATCTGAGCACTTTAAGTTTATGTATACTATATGTAACCATGTTTAATCCAGATACTTTACTTTTTTATGTCTCTTAATCAAATAATGACTGCTTATAATTATCGAATCCTATAAGGTAGTCAAAGTCTCAAGTTAAATGTCCTTTGGAAAGTTTCCGTCTTGCAGATGGCCCAACTACTGAATTGTAACATTACTAGTAGCTTAATCAAGAGTTATTCATAATTGTTGTTTATACCTGTTGGCCACTGATAGTTGCAGATGAGATTTCTTTAAATATCAACTTTGCTACTCGAATAATAAGTACCAGTACCGAATGGGAAACGTCTACTGTTTAGACTCTCTAGTTCCTTGCAGATTTTGAAGGATTACTTGTCTTTTCCTGATATGTATTTCATATAAATAGGAAGAGAATTGTAAACTAACCACTGGAGATGGAGCACATGATTTTCAAGGGAGGCCTGTGGAATTAATTTGGAGACCCTGTCTTTTTATTTGTGGTGAGTGTTGGAATGCTAGCCATTACTATTCTTGTCAGAACACTATAATCTTTAGTATTAACCGTTTAATCCTCCCCTGCCCCCCTTTCTTCTTCTATGTACATGTAATGACCATGTAAGTGAACGTCTTGCCTTCTATGGTGTCAGTACAAACCTAGTTAGTTATATATGGTGTCAATGCTCTGGGTGTTTTTGTACTTTGCATAGATTATTGCTTGATTGTACTTTGTATAGATTATTGCTTGATATTCACTAGTAGAAAAATCTTTTTGTGGCAATACTTAATATAATGATTCTCTTGCACATATGATGATATTGGAACCAATGTTGAGAACGCTCAAGCAGGCGACCCATCTGGCAAAGGCATCAAAGACTCGGCGTTCAAATTCAGCACTGGTCAGTTGTGTTTTCACCGCTGATGTTTCTTCCAGTGTTATCTTATCCAAATATTTTGGCAATAGTTAGTCATCGTGTTGGGTTTGGGGGGGGGGGGGGGGGGGGGGGNGGGGGGGGGGGAGGTTAAAAAAATGAAAGAATACGCTTTTCTGTTTGTTTTGACAGTCTTGGCTATATTCATTGTGGCTTGTGAACGAAAGTTCAACTAGGATTTGAACTAAAAATTTAGAATTTGGTTGATAACCGTGTTAACCCAACTTATAGATGTAACACGTGACTTCTTAACAGTTAACCCACCCCCTAGGGTATGACCTATAATGATCAACGAGCCTTATATATGTGCCTAACTTAACTAAAGTAGGTACAAATGAGTTTTAGAAACATTAAATAAATCTAATAAACATGTAAAGGGTTTAAAATACCCATTTAGGTTCATTAGTTGAAAGTTTGGACCGAAATAAGCCGTTTTAGTCAAAATGTAACCTATACTTATCAAACGAGTTTCATATATGCATAACTTGACTAAAGTAGGTGAGAATGAGTATTTTTTTTTAAACATATATCTAAGTATATTAAACATCTAAAGGGTTATAAATACTTATATAGGTTCATTGGTTGAAAGTTAGAACCGAAATATGTCATTTTAGTCAAAATGTGTCCTATAATGATCAAACGAGTCTTAAATGTGTATAATTTGACCAAAGTATATGAGAATGAGTATCTGAAACATAAAATTAAGTATTTTATACATAAAAAGACTTTAAAATACTCATTTAAGTTCATTAGTTGAAATTTGGGATCGAAATTAGCCATTTTAGTCAAAATTTGACCCATAATGAACTAACGAAGCTTAAATGTGCATAACTTCACCAAAATGGTGAGAATGAGTTTTTGAAACATAAAAATAAGTGTATTAAACAAGGAAAGACTTTAAAATACACATTTAAGTTCATTAGTTGAAAGTTGGGACCGAAATTAGCCATTTTAGTCAAAACGTGACCGATAATGAACTAACGAAGTTTAAATGTGCATAACTTCACCAAAATGGGTAGAATGAGTATTTGAAACATAAAACTTAAGTTTATTAAACATGGAAAGACTTTAAAATACTCATTTAAGTTCATTAGTTGAAAGTTAGGACCGAATTTAGTCATTTTAGTCAAAACGTGACCGATAATGAACTAACGATCCTTATATGTGCATAACTTCACCAAATGGGTGAGAATGAGTATTTGAAACATAAAACTAAGTGTATTAAACATGGAAATACTTTGAAATACTCATTTAAGTTCATTAGATAAAAGTTGGGACCGAAATTAGTCATTTTAGTCAAAATGTGACCGATAATGAACTAACGAGGCTTAAATGTGCATAACTTCACAAAAATGGGTGAGAATGAGTCTTTGAAACATAAAAATAAGTTTATTAAACATGGAAGGACTTTAAAATATTTATTTAAGTTCATTAGTTGAAAGTTGGGACCGAAATTAACCAATTTTATTATTATATGGTTCATTATTTCTTTATTATGAACAAATTAAGTCTTAATTTATTTTACGAATCAATATTTATAATATAACTAAAGTGTATATATATTTTTTGATGGCTGATCTTTTTAAGGTCTTCAATAATACGAGGGAGCGGCCTTTCACCTTTGAGGAGCTAGATGAAGTTCGAGAAATGTTGGCAAACTTCATTACCAGTGATTGTTTTTGATATTTTCTTGTACTGAATCTTAAATTATGGATGCTAGCTAGTGTTTCATATGATTGTAATGTAATCGACTTTCATATTTACAATTATATACTATTTATTTTAATTATCTATATAATTGGATACTTTTTGTATGACGTATGAAGGTTAATCAGTGGCGTGGTCCAATTATAATATGTAGCAGGGAAATCGTTGTATAACAAATCTAGATCAAGTGCGGCTCATTTATAGGCCAAGTGCGGCTCATTTTTATGCTTATGATGCCCATTTCTATGTCAAGTGCGGGCTCATTTTCAAATTTGGCAGCACCAAATATGTCAAGTGCGGGCTCATTTTCAATATTGGCAGCACCAAATATGTCAAGTGCGGGCTCATTTTCAAAATTGGGAGCACCAAATATATCAAGTGCGGGCTCATATTCTAAAATTGGCAGCACAAAATATGTCAAGTGCGGGCTCATTTTCCAAATTGGCAGCACTTGAAATATCAAGTGCTGCCAATATTTTGGCAGCACTTGAGAAACATCAAGTGCGGGCAGGCCATGTTCTGCACATGTAAAAGCCCGCACTAAACCCCTTAAAATGAGCCCGCACTTGAGGTTTTTTCCTCTAGTGTATGAGTACGAAAGCTAGAGGTGAGTTCAGCTATTTCATAACGTTTACAGACAACTTCAGTAGATATGGCTATATTTACTTAATGAAGCACAAGTCTGAATCGTTTGAGAAATTCAGA

mRNA sequence

ATGCTGAAAACCGCTGAAAAGACGCTCAAGCAAGAGATTAAGCACGATATGCTTATGGTGCGTAAGGGCAAGAACTTCAAGAAATCGAGCAAGAATAAGGGCAAGAAGGGTAAGGGCAAGGCTACGCCCTCATCCAAGTCCAACGGCACCAGTTCTGGTAAACAGAAAAGGGTGACTCGTTCTCCTGTCGACTTTGAATGCTTCTACTGCAGGAAGAAGGGGCATTGGAAGAGGGATTGCTTGAAGAAGAAGGAAGATGAGAAGAACGGGAACGTTGCTTCTACTTCAGAGAATCTCTCTCCTCGATTCTTCTCCCTCTTCCTCTTCAGCTTCAGCTTCGTTTTCTCTCTCCTCTGTCGTCGCCGTCGCTTCTTCACCGCCGGAGATCGATATCCCCCACCTCCGTTGATCTCTACCCTCTTCCAGATCAGACTAATTCAGTTATATAATGGCTACAAAATGCTCAAGGTACATTTTATCAGACACACAGTTTATGATGATAAGATGATAACAGCATCAAGTATCACACAGTCAGCAGTGTGTGTCTGGCCTTATATTTATTGCCGGGAAGAGAATTGTAAACTAACCACTGGAGATGGAGCACATGATTTTCAAGGGAGGCCTGTGGAATTAATTTGGAGACCCTGTCTTTTTATTTGTGAACGCTCAAGCAGGCGACCCATCTGGCAAAGGCATCAAAGACTCGGCGTTCAAATTCAGCACTGA

Coding sequence (CDS)

ATGCTGAAAACCGCTGAAAAGACGCTCAAGCAAGAGATTAAGCACGATATGCTTATGGTGCGTAAGGGCAAGAACTTCAAGAAATCGAGCAAGAATAAGGGCAAGAAGGGTAAGGGCAAGGCTACGCCCTCATCCAAGTCCAACGGCACCAGTTCTGGTAAACAGAAAAGGGTGACTCGTTCTCCTGTCGACTTTGAATGCTTCTACTGCAGGAAGAAGGGGCATTGGAAGAGGGATTGCTTGAAGAAGAAGGAAGATGAGAAGAACGGGAACGTTGCTTCTACTTCAGAGAATCTCTCTCCTCGATTCTTCTCCCTCTTCCTCTTCAGCTTCAGCTTCGTTTTCTCTCTCCTCTGTCGTCGCCGTCGCTTCTTCACCGCCGGAGATCGATATCCCCCACCTCCGTTGATCTCTACCCTCTTCCAGATCAGACTAATTCAGTTATATAATGGCTACAAAATGCTCAAGGTACATTTTATCAGACACACAGTTTATGATGATAAGATGATAACAGCATCAAGTATCACACAGTCAGCAGTGTGTGTCTGGCCTTATATTTATTGCCGGGAAGAGAATTGTAAACTAACCACTGGAGATGGAGCACATGATTTTCAAGGGAGGCCTGTGGAATTAATTTGGAGACCCTGTCTTTTTATTTGTGAACGCTCAAGCAGGCGACCCATCTGGCAAAGGCATCAAAGACTCGGCGTTCAAATTCAGCACTGA

Protein sequence

MLKTAEKTLKQEIKHDMLMVRKGKNFKKSSKNKGKKGKGKATPSSKSNGTSSGKQKRVTRSPVDFECFYCRKKGHWKRDCLKKKEDEKNGNVASTSENLSPRFFSLFLFSFSFVFSLLCRRRRFFTAGDRYPPPPLISTLFQIRLIQLYNGYKMLKVHFIRHTVYDDKMITASSITQSAVCVWPYIYCREENCKLTTGDGAHDFQGRPVELIWRPCLFICERSSRRPIWQRHQRLGVQIQH

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
Spo17989	Spo17989	gene

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
Spo17989.1	Spo17989.1-protein	polypeptide

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Spo17989.1.CDS.7	Spo17989.1.CDS.7	CDS
Spo17989.1.CDS.6	Spo17989.1.CDS.6	CDS
Spo17989.1.CDS.5	Spo17989.1.CDS.5	CDS
Spo17989.1.CDS.4	Spo17989.1.CDS.4	CDS
Spo17989.1.CDS.3	Spo17989.1.CDS.3	CDS
Spo17989.1.CDS.2	Spo17989.1.CDS.2	CDS
Spo17989.1.CDS.1	Spo17989.1.CDS.1	CDS

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Spo17989.1.exon.7	Spo17989.1.exon.7	exon
Spo17989.1.exon.6	Spo17989.1.exon.6	exon
Spo17989.1.exon.5	Spo17989.1.exon.5	exon
Spo17989.1.exon.4	Spo17989.1.exon.4	exon
Spo17989.1.exon.3	Spo17989.1.exon.3	exon
Spo17989.1.exon.2	Spo17989.1.exon.2	exon
Spo17989.1.exon.1	Spo17989.1.exon.1	exon

Homology

[Close]

BLAST of Spo17989.1 vs. NCBI nr
Match: gi|902095074|gb|KNA03392.1| (hypothetical protein SOVF_209650, partial [Spinacia oleracea])

HSP 1 Score: 70.1 bits (170), Expect = 6.000e-9
Identity = 32/36 (88.89%), Postives = 34/36 (94.44%), Query Frame = 1

		  
Query: 113 FVFSLLCRRRRFFTAGDRYPPPPLISTLFQIRLIQL 149
           FVFSLLCRRRRFFT GDR PPPPLISTLFQIRL+Q+
Sbjct: 1   FVFSLLCRRRRFFTTGDRSPPPPLISTLFQIRLLQV 36

[Close]

BLAST of Spo17989.1 vs. NCBI nr
Match: gi|731371355|ref|XP_010666016.1| (PREDICTED: uncharacterized protein LOC104883233 [Beta vulgaris subsp. vulgaris])

HSP 1 Score: 62.8 bits (151), Expect = 9.600e-7
Identity = 43/100 (43.00%), Postives = 57/100 (57.00%), Query Frame = 1

		  
Query: 1   MLKTAEKTLKQEIKHDMLMVRKGKNFKKSSKNKGK----KGKGKATPSSKSNGTSSGKQK 60
           MLKTAE ++K   K+ +LM++K K   K   NK +    KGKGK    +K+  T      
Sbjct: 53  MLKTAEPSIKVAPKNHVLMIQKKKGVFKKQGNKKQYPQSKGKGKQVVKTKAGAT------ 112

Query: 61  RVTRSPVDFECFYCRKKGHWKRDCLKKKEDEKNGNVASTS 97
                 +D ECF+  K GHWKR+C K  ED+KNG +ASTS
Sbjct: 113 ------LDQECFHYHKPGHWKRNCPKYLEDKKNGKIASTS 140

[Close]

BLAST of Spo17989.1 vs. NCBI nr
Match: gi|960485473|ref|XP_014757873.1| (PREDICTED: uncharacterized protein LOC106866720, partial [Brachypodium distachyon])

HSP 1 Score: 61.2 bits (147), Expect = 2.800e-6
Identity = 46/95 (48.42%), Postives = 56/95 (58.95%), Query Frame = 1

		  
Query: 1   MLKTAEKTLKQEIKHDMLMVRKGKNFKKSSKNKG---KKGKGKATPSSKSNGTSSGKQKR 60
           MLKTAE  +K+E  H +LMV K  +FKK+   KG   K GK  ATP+ KS    SG +  
Sbjct: 369 MLKTAEVEIKKE--HQVLMVNKTTSFKKAKGKKGNFKKGGKTVATPAKKSK---SGPKP- 428

Query: 61  VTRSPVDFECFYCRKKGHWKRDCLKKKEDEKNGNV 93
                 D ECFYC+  GHWKR+C K   D+K GNV
Sbjct: 429 ------DTECFYCKGTGHWKRNCPKYLADKKAGNV 451

[Close]

BLAST of Spo17989.1 vs. NCBI nr
Match: gi|474373353|gb|EMS63983.1| (Protein phosphatase 2C 35 [Triticum urartu])

HSP 1 Score: 61.2 bits (147), Expect = 2.800e-6
Identity = 41/94 (43.62%), Postives = 55/94 (58.51%), Query Frame = 1

		  
Query: 1   MLKTAEKTLKQEIKHDMLMVRKGKNFKKSSKNKGKKGKGKATPSSKSNGTSSGKQKRVTR 60
           MLKTAE  +K+E  H +LMV K  +FKK       KGKGK   + K NG     Q++  +
Sbjct: 45  MLKTAEVEIKKE--HQVLMVNKTTSFKK-------KGKGKKKGNFKKNGKQVATQEKKPK 104

Query: 61  S--PVDFECFYCRKKGHWKRDCLKKKEDEKNGNV 93
                + ECFYC++ GHWKR+C K   D+K+G V
Sbjct: 105 PGPKPETECFYCKQTGHWKRNCPKYLADKKDGKV 129

[Close]

BLAST of Spo17989.1 vs. NCBI nr
Match: gi|731317601|ref|XP_010669277.1| (PREDICTED: uncharacterized protein LOC104886528 [Beta vulgaris subsp. vulgaris])

HSP 1 Score: 59.7 bits (143), Expect = 8.200e-6
Identity = 47/97 (48.45%), Postives = 56/97 (57.73%), Query Frame = 1

		  
Query: 1   MLKTAEKTLKQEIKH-DMLMVRKGKNFKKSSKNKGKKGKGKATPSSKSNGTSSGKQKRVT 60
           ML  AE++L  E KH D+LMVRKGK FKK      KK KGK   S   N  S  K     
Sbjct: 14  MLIQAERSLPTEPKHKDVLMVRKGKQFKKKGAPM-KKNKGKVVAS---NDISKPKVTPKE 73

Query: 61  RSPVDFECFYCRKKGHWKRDCLKKKEDEKNGNVASTS 97
           +     ECF+C K GHWKR+C +  ED+K+G  ASTS
Sbjct: 74  KVAALHECFHCHKIGHWKRNCPEYLEDKKSG--ASTS 104

[Close]

BLAST of Spo17989.1 vs. UniProtKB/TrEMBL
Match: A0A0K9Q7Y6_SPIOL (Uncharacterized protein (Fragment) OS=Spinacia oleracea GN=SOVF_209650 PE=4 SV=1)

HSP 1 Score: 70.1 bits (170), Expect = 4.200e-9
Identity = 32/36 (88.89%), Postives = 34/36 (94.44%), Query Frame = 1

		  
Query: 113 FVFSLLCRRRRFFTAGDRYPPPPLISTLFQIRLIQL 149
           FVFSLLCRRRRFFT GDR PPPPLISTLFQIRL+Q+
Sbjct: 1   FVFSLLCRRRRFFTTGDRSPPPPLISTLFQIRLLQV 36

[Close]

BLAST of Spo17989.1 vs. UniProtKB/TrEMBL
Match: M7ZL73_TRIUA (Protein phosphatase 2C 35 OS=Triticum urartu GN=TRIUR3_30638 PE=4 SV=1)

HSP 1 Score: 61.2 bits (147), Expect = 2.000e-6
Identity = 41/94 (43.62%), Postives = 55/94 (58.51%), Query Frame = 1

		  
Query: 1   MLKTAEKTLKQEIKHDMLMVRKGKNFKKSSKNKGKKGKGKATPSSKSNGTSSGKQKRVTR 60
           MLKTAE  +K+E  H +LMV K  +FKK       KGKGK   + K NG     Q++  +
Sbjct: 45  MLKTAEVEIKKE--HQVLMVNKTTSFKK-------KGKGKKKGNFKKNGKQVATQEKKPK 104

Query: 61  S--PVDFECFYCRKKGHWKRDCLKKKEDEKNGNV 93
                + ECFYC++ GHWKR+C K   D+K+G V
Sbjct: 105 PGPKPETECFYCKQTGHWKRNCPKYLADKKDGKV 129

The following BLAST results are available for this feature:

BLAST of Spo17989.1 vs. NCBI nr
BLAST of Spo17989.1 vs. UniProtKB/TrEMBL
BLAST of Spo17989.1 vs. ExPASy Swiss-Prot
BLAST of Spo17989.1 vs. TAIR (Arabidopsis)

BLAST of Spo17989.1 vs. NCBI nr
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. NCBI nr)
Total hits: 5

Position :

Zoom :

x 1


Match Name	E-value	Identity	Description
gi\|902095074\|gb\|KNA03392.1\|	6.0e-9	88.8	hypothetical protein SOVF_2096...	[more]
gi\|731371355\|ref\|XP_010666016.1\|	9.6e-7	43.0	PREDICTED: uncharacterized pro...	[more]
gi\|960485473\|ref\|XP_014757873.1\|	2.8e-6	48.4	PREDICTED: uncharacterized pro...	[more]
gi\|474373353\|gb\|EMS63983.1\|	2.8e-6	43.6	Protein phosphatase 2C 35 [Tri...	[more]
gi\|731317601\|ref\|XP_010669277.1\|	8.2e-6	48.4	PREDICTED: uncharacterized pro...	[more]

BLAST of Spo17989.1 vs. UniProtKB/TrEMBL
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. UniprotKB/TrEMBL)
Total hits: 2

Position :

Zoom :

x 1


Match Name	E-value	Identity	Description
A0A0K9Q7Y6_SPIOL	4.2e-9	88.8	Uncharacterized protein (Fragm...	[more]
M7ZL73_TRIUA	2.0e-6	43.6	Protein phosphatase 2C 35 OS=T...	[more]

BLAST of Spo17989.1 vs. ExPASy Swiss-Prot
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. ExPASy SwissProt)
Total hits: 0

Position :

Zoom :

x 1


Match Name	E-value	Identity	Description

BLAST of Spo17989.1 vs. TAIR (Arabidopsis)
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. TAIR)
Total hits: 0

Position :

Zoom :

x 1


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of S. oleracea
Date Performed: 2018-06-29

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001878	Zinc finger, CCHC-type	GENE3D	4.10.60.10		coord: 66..88 score: 1.
IPR001878	Zinc finger, CCHC-type	PFAM	PF00098	zf-CCHC	coord: 66..80 score: 1.
IPR001878	Zinc finger, CCHC-type	SMART	SM00343	c2hcfinal6	coord: 66..82 score: 0
IPR001878	Zinc finger, CCHC-type	PROFILE	PS50158	ZF_CCHC	coord: 67..80 score: 9
IPR001878	Zinc finger, CCHC-type	unknown	SSF57756	Retrovirus zinc finger-like domains	coord: 51..88 score: 1.

GO Annotation

GO Assignments

This mRNA is annotated with the following GO terms.

Category	Term Accession	Term Name
molecular_function	GO:0003676	nucleic acid binding
molecular_function	GO:0008270	zinc ion binding