Spo10529.1 (mRNA) | SpinachBase

Overview


Name	Spo10529.1
Type	mRNA
Organism	Spinacia oleracea (Spinach)
Description	Chlorophyll a-b binding protein 1, chloroplastic (Chlorophyll a-b protein 140) (CAB-140) (LHCII type I CAB-1) (Precursor)
Location	Super_scaffold_120 : 357512 .. 358315 (+)
Sequence length	804

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCTTCCTCAACAATGGCTCTTTCTTCCCCGGCCTTTGGCGGTAAGGCGGTTAAGCTTAACCCAAGCACCTCCGACATGATTGGTGAGGGAAGGATCAGCATGAGGAAGTCAGCTGGGAAGCCCAAGAATGTATCATCAGGAAGCCCATGGTACGGTCCCGACCGTGTTAAGTACTTGGGCCCATTCTCCGGTGAGGCTCCATCCTACCTTACTGGTGAGTTCCCAGGTGACTACGGTTGGGACACTGCTGGGCTTTCTGCTGACCCAGAAACCTTCTCTAAGAACCGTGAGCTTGAGGTGATCCACTGCAGATGGGCTATGTTGGGAGCTTTGGGCTGTGTTTTCCCAGAGCTTTTGGCCCGTAATGGTGTTAAGTTTGGTGAAGCTGTTTGGTTTAAGGCTGGATCACAAATCTTTAGCGAAGGTGGACTTGACTACTTGGGTAACCCAAGTTTGGTTCATGCACAAAGTATTCTTGCTATTTGGGCTTGCCAAGTTATCTTGATGGGTGCTGTTGAAGGTTACCGTGTTGCTGGTGGGCCACTTGGTGAGGTTGTTGACCCACTTTACCCTGGTGGTAGCTTTGACCCATTGGGTTTGGCTGAAGACCCAGAGGCTTTTGCCGAATTGAAGGTAAAGGAGATCAAGAATGGTAGATTAGCTATGTTTTCAATGTTCGGATTCTTTGTTCAAGCTATTGTTACCGGAAAGGGCCCATTGGAGAACCTTGCTGACCATCTTGCCGACCCGGTTAACAACAACGCTTGGAACTTTGCCACCAACTTCGTTCCCGGCAACTGA

mRNA sequence

ATGGCTTCCTCAACAATGGCTCTTTCTTCCCCGGCCTTTGGCGGTAAGGCGGTTAAGCTTAACCCAAGCACCTCCGACATGATTGGTGAGGGAAGGATCAGCATGAGGAAGTCAGCTGGGAAGCCCAAGAATGTATCATCAGGAAGCCCATGGTACGGTCCCGACCGTGTTAAGTACTTGGGCCCATTCTCCGGTGAGGCTCCATCCTACCTTACTGGTGAGTTCCCAGGTGACTACGGTTGGGACACTGCTGGGCTTTCTGCTGACCCAGAAACCTTCTCTAAGAACCGTGAGCTTGAGGTGATCCACTGCAGATGGGCTATGTTGGGAGCTTTGGGCTGTGTTTTCCCAGAGCTTTTGGCCCGTAATGGTGTTAAGTTTGGTGAAGCTGTTTGGTTTAAGGCTGGATCACAAATCTTTAGCGAAGGTGGACTTGACTACTTGGGTAACCCAAGTTTGGTTCATGCACAAAGTATTCTTGCTATTTGGGCTTGCCAAGTTATCTTGATGGGTGCTGTTGAAGGTTACCGTGTTGCTGGTGGGCCACTTGGTGAGGTTGTTGACCCACTTTACCCTGGTGGTAGCTTTGACCCATTGGGTTTGGCTGAAGACCCAGAGGCTTTTGCCGAATTGAAGGTAAAGGAGATCAAGAATGGTAGATTAGCTATGTTTTCAATGTTCGGATTCTTTGTTCAAGCTATTGTTACCGGAAAGGGCCCATTGGAGAACCTTGCTGACCATCTTGCCGACCCGGTTAACAACAACGCTTGGAACTTTGCCACCAACTTCGTTCCCGGCAACTGA

Coding sequence (CDS)

ATGGCTTCCTCAACAATGGCTCTTTCTTCCCCGGCCTTTGGCGGTAAGGCGGTTAAGCTTAACCCAAGCACCTCCGACATGATTGGTGAGGGAAGGATCAGCATGAGGAAGTCAGCTGGGAAGCCCAAGAATGTATCATCAGGAAGCCCATGGTACGGTCCCGACCGTGTTAAGTACTTGGGCCCATTCTCCGGTGAGGCTCCATCCTACCTTACTGGTGAGTTCCCAGGTGACTACGGTTGGGACACTGCTGGGCTTTCTGCTGACCCAGAAACCTTCTCTAAGAACCGTGAGCTTGAGGTGATCCACTGCAGATGGGCTATGTTGGGAGCTTTGGGCTGTGTTTTCCCAGAGCTTTTGGCCCGTAATGGTGTTAAGTTTGGTGAAGCTGTTTGGTTTAAGGCTGGATCACAAATCTTTAGCGAAGGTGGACTTGACTACTTGGGTAACCCAAGTTTGGTTCATGCACAAAGTATTCTTGCTATTTGGGCTTGCCAAGTTATCTTGATGGGTGCTGTTGAAGGTTACCGTGTTGCTGGTGGGCCACTTGGTGAGGTTGTTGACCCACTTTACCCTGGTGGTAGCTTTGACCCATTGGGTTTGGCTGAAGACCCAGAGGCTTTTGCCGAATTGAAGGTAAAGGAGATCAAGAATGGTAGATTAGCTATGTTTTCAATGTTCGGATTCTTTGTTCAAGCTATTGTTACCGGAAAGGGCCCATTGGAGAACCTTGCTGACCATCTTGCCGACCCGGTTAACAACAACGCTTGGAACTTTGCCACCAACTTCGTTCCCGGCAACTGA

Protein sequence

MASSTMALSSPAFGGKAVKLNPSTSDMIGEGRISMRKSAGKPKNVSSGSPWYGPDRVKYLGPFSGEAPSYLTGEFPGDYGWDTAGLSADPETFSKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWACQVILMGAVEGYRVAGGPLGEVVDPLYPGGSFDPLGLAEDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNNAWNFATNFVPGN

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
Spo10529	Spo10529	gene

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
Spo10529.1	Spo10529.1-protein	polypeptide

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Spo10529.1.exon.1	Spo10529.1.exon.1	exon

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Spo10529.1.CDS.1	Spo10529.1.CDS.1	CDS

Homology

[Close]

BLAST of Spo10529.1 vs. NCBI nr
Match: gi|133917263|emb|CAJ77391.1| (major chlorophyll a/b binding protein LHCb1.1 [Spinacia oleracea])

HSP 1 Score: 551.6 bits (1420), Expect = 7.600e-154
Identity = 267/267 (100.00%), Postives = 267/267 (100.00%), Query Frame = 1


		  
Query: 1   MASSTMALSSPAFGGKAVKLNPSTSDMIGEGRISMRKSAGKPKNVSSGSPWYGPDRVKYL 60
           MASSTMALSSPAFGGKAVKLNPSTSDMIGEGRISMRKSAGKPKNVSSGSPWYGPDRVKYL
Sbjct: 1   MASSTMALSSPAFGGKAVKLNPSTSDMIGEGRISMRKSAGKPKNVSSGSPWYGPDRVKYL 60

Query: 61  GPFSGEAPSYLTGEFPGDYGWDTAGLSADPETFSKNRELEVIHCRWAMLGALGCVFPELL 120
           GPFSGEAPSYLTGEFPGDYGWDTAGLSADPETFSKNRELEVIHCRWAMLGALGCVFPELL
Sbjct: 61  GPFSGEAPSYLTGEFPGDYGWDTAGLSADPETFSKNRELEVIHCRWAMLGALGCVFPELL 120

Query: 121 ARNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWACQVILMGAVEGYRVAG 180
           ARNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWACQVILMGAVEGYRVAG
Sbjct: 121 ARNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWACQVILMGAVEGYRVAG 180

Query: 181 GPLGEVVDPLYPGGSFDPLGLAEDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGP 240
           GPLGEVVDPLYPGGSFDPLGLAEDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGP
Sbjct: 181 GPLGEVVDPLYPGGSFDPLGLAEDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGP 240

Query: 241 LENLADHLADPVNNNAWNFATNFVPGN 268
           LENLADHLADPVNNNAWNFATNFVPGN
Sbjct: 241 LENLADHLADPVNNNAWNFATNFVPGN 267

[Close]

BLAST of Spo10529.1 vs. NCBI nr
Match: gi|133917261|emb|CAJ77390.1| (major chlorophyll a/b binding protein LHCb1.2 [Spinacia oleracea])

HSP 1 Score: 528.1 bits (1359), Expect = 9.000e-147
Identity = 250/266 (93.98%), Postives = 262/266 (98.50%), Query Frame = 1


		  
Query: 1   MASSTMALSSPAFGGKAVKLNPSTSDMIGEGRISMRKSAGKPKNVSSGSPWYGPDRVKYL 60
           MASSTMALSSP+  GKA+KL P+ S+++GEGR++MRK+AGKPKNVSSGSPWYGPDRVKYL
Sbjct: 1   MASSTMALSSPSLAGKAIKLGPTASEILGEGRVTMRKTAGKPKNVSSGSPWYGPDRVKYL 60

Query: 61  GPFSGEAPSYLTGEFPGDYGWDTAGLSADPETFSKNRELEVIHCRWAMLGALGCVFPELL 120
           GPFSGEAPSYLTGEFPGDYGWDTAGLSADPETFSKNRELEVIHCRWAMLGALGCVFPELL
Sbjct: 61  GPFSGEAPSYLTGEFPGDYGWDTAGLSADPETFSKNRELEVIHCRWAMLGALGCVFPELL 120

Query: 121 ARNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWACQVILMGAVEGYRVAG 180
           ARNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWACQVILMGAVEGYR+AG
Sbjct: 121 ARNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWACQVILMGAVEGYRIAG 180

Query: 181 GPLGEVVDPLYPGGSFDPLGLAEDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGP 240
           GPLGEVVDPLYPGGSFDPLGLA+DPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGP
Sbjct: 181 GPLGEVVDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGP 240

Query: 241 LENLADHLADPVNNNAWNFATNFVPG 267
           LENLADHLADPVNNNAW+FATNFVPG
Sbjct: 241 LENLADHLADPVNNNAWSFATNFVPG 266

[Close]

BLAST of Spo10529.1 vs. NCBI nr
Match: gi|902212423|gb|KNA16961.1| (hypothetical protein SOVF_084380 [Spinacia oleracea])

HSP 1 Score: 524.2 bits (1349), Expect = 1.300e-145
Identity = 250/266 (93.98%), Postives = 259/266 (97.37%), Query Frame = 1


		  
Query: 1   MASSTMALSSPAFGGKAVKLNPSTSDMIGEGRISMRKSAGKPKNVSSGSPWYGPDRVKYL 60
           MASSTMALSSP+  GKAVKL P+ S++IGEGRI+MRK+AGKPK V S SPWYGPDRVKYL
Sbjct: 1   MASSTMALSSPSLAGKAVKLGPTASEIIGEGRITMRKTAGKPKTVQSSSPWYGPDRVKYL 60

Query: 61  GPFSGEAPSYLTGEFPGDYGWDTAGLSADPETFSKNRELEVIHCRWAMLGALGCVFPELL 120
           GPFSGEAPSYLTGEFPGDYGWDTAGLSADPETF+KNRELEVIHCRWAMLGALGCVFPELL
Sbjct: 61  GPFSGEAPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELL 120

Query: 121 ARNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWACQVILMGAVEGYRVAG 180
           ARNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWACQVILMGAVEGYR+AG
Sbjct: 121 ARNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWACQVILMGAVEGYRIAG 180

Query: 181 GPLGEVVDPLYPGGSFDPLGLAEDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGP 240
           GPLGEVVDPLYPGGSFDPLGLA+DPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGP
Sbjct: 181 GPLGEVVDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGP 240

Query: 241 LENLADHLADPVNNNAWNFATNFVPG 267
           LENLADHLADPVNNNAWNFATNFVPG
Sbjct: 241 LENLADHLADPVNNNAWNFATNFVPG 266

[Close]

BLAST of Spo10529.1 vs. NCBI nr
Match: gi|283549609|emb|CAX64458.1| (major chlorophyll a/b binding protein LHCb1.4 precursor [Spinacia oleracea])

HSP 1 Score: 523.1 bits (1346), Expect = 2.900e-145
Identity = 247/266 (92.86%), Postives = 261/266 (98.12%), Query Frame = 1


		  
Query: 1   MASSTMALSSPAFGGKAVKLNPSTSDMIGEGRISMRKSAGKPKNVSSGSPWYGPDRVKYL 60
           MAS++MALSSP+  GKA+KL P+ S+++ EGR++MRK+AGKPKNVSSGSPWYGPDRVKYL
Sbjct: 1   MASTSMALSSPSLAGKAIKLGPTASEILSEGRVTMRKTAGKPKNVSSGSPWYGPDRVKYL 60

Query: 61  GPFSGEAPSYLTGEFPGDYGWDTAGLSADPETFSKNRELEVIHCRWAMLGALGCVFPELL 120
           GPFSGEAPSYLTGEFPGDYGWDTAGLSADPETFSKNRELEVIHCRWAMLGALGCVFPELL
Sbjct: 61  GPFSGEAPSYLTGEFPGDYGWDTAGLSADPETFSKNRELEVIHCRWAMLGALGCVFPELL 120

Query: 121 ARNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWACQVILMGAVEGYRVAG 180
           ARNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWACQVILMGAVEGYR+AG
Sbjct: 121 ARNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWACQVILMGAVEGYRIAG 180

Query: 181 GPLGEVVDPLYPGGSFDPLGLAEDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGP 240
           GPLGEVVDPLYPGGSFDPLGLA+DPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGP
Sbjct: 181 GPLGEVVDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGP 240

Query: 241 LENLADHLADPVNNNAWNFATNFVPG 267
           LENLADHLADPVNNNAW+FATNFVPG
Sbjct: 241 LENLADHLADPVNNNAWSFATNFVPG 266

[Close]

BLAST of Spo10529.1 vs. NCBI nr
Match: gi|115780|sp|P12333.1|CB2A_SPIOL (RecName: Full=Chlorophyll a-b binding protein, chloroplastic; AltName: Full=LHCII type I CAB; Short=LHCP; Flags: Precursor)

HSP 1 Score: 523.1 bits (1346), Expect = 2.900e-145
Identity = 249/266 (93.61%), Postives = 259/266 (97.37%), Query Frame = 1


		  
Query: 1   MASSTMALSSPAFGGKAVKLNPSTSDMIGEGRISMRKSAGKPKNVSSGSPWYGPDRVKYL 60
           MASSTMALSSP+  GKAVKL P+ S++IGEGRI+MRK+AGKPK V S SPWYGPDRVKYL
Sbjct: 1   MASSTMALSSPSLAGKAVKLGPTASEIIGEGRITMRKTAGKPKTVQSSSPWYGPDRVKYL 60

Query: 61  GPFSGEAPSYLTGEFPGDYGWDTAGLSADPETFSKNRELEVIHCRWAMLGALGCVFPELL 120
           GPFSGE+PSYLTGEFPGDYGWDTAGLSADPETF+KNRELEVIHCRWAMLGALGCVFPELL
Sbjct: 61  GPFSGESPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELL 120

Query: 121 ARNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWACQVILMGAVEGYRVAG 180
           ARNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWACQVILMGAVEGYR+AG
Sbjct: 121 ARNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWACQVILMGAVEGYRIAG 180

Query: 181 GPLGEVVDPLYPGGSFDPLGLAEDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGP 240
           GPLGEVVDPLYPGGSFDPLGLA+DPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGP
Sbjct: 181 GPLGEVVDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGP 240

Query: 241 LENLADHLADPVNNNAWNFATNFVPG 267
           LENLADHLADPVNNNAWNFATNFVPG
Sbjct: 241 LENLADHLADPVNNNAWNFATNFVPG 266

[Close]

BLAST of Spo10529.1 vs. UniProtKB/TrEMBL
Match: A4F3R4_SPIOL (Chlorophyll a-b binding protein, chloroplastic OS=Spinacia oleracea GN=lhcb1.1 PE=3 SV=1)

HSP 1 Score: 551.6 bits (1420), Expect = 5.300e-154
Identity = 267/267 (100.00%), Postives = 267/267 (100.00%), Query Frame = 1


		  
Query: 1   MASSTMALSSPAFGGKAVKLNPSTSDMIGEGRISMRKSAGKPKNVSSGSPWYGPDRVKYL 60
           MASSTMALSSPAFGGKAVKLNPSTSDMIGEGRISMRKSAGKPKNVSSGSPWYGPDRVKYL
Sbjct: 1   MASSTMALSSPAFGGKAVKLNPSTSDMIGEGRISMRKSAGKPKNVSSGSPWYGPDRVKYL 60

Query: 61  GPFSGEAPSYLTGEFPGDYGWDTAGLSADPETFSKNRELEVIHCRWAMLGALGCVFPELL 120
           GPFSGEAPSYLTGEFPGDYGWDTAGLSADPETFSKNRELEVIHCRWAMLGALGCVFPELL
Sbjct: 61  GPFSGEAPSYLTGEFPGDYGWDTAGLSADPETFSKNRELEVIHCRWAMLGALGCVFPELL 120

Query: 121 ARNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWACQVILMGAVEGYRVAG 180
           ARNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWACQVILMGAVEGYRVAG
Sbjct: 121 ARNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWACQVILMGAVEGYRVAG 180

Query: 181 GPLGEVVDPLYPGGSFDPLGLAEDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGP 240
           GPLGEVVDPLYPGGSFDPLGLAEDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGP
Sbjct: 181 GPLGEVVDPLYPGGSFDPLGLAEDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGP 240

Query: 241 LENLADHLADPVNNNAWNFATNFVPGN 268
           LENLADHLADPVNNNAWNFATNFVPGN
Sbjct: 241 LENLADHLADPVNNNAWNFATNFVPGN 267

[Close]

BLAST of Spo10529.1 vs. UniProtKB/TrEMBL
Match: A4F3R3_SPIOL (Chlorophyll a-b binding protein, chloroplastic OS=Spinacia oleracea GN=lhcb1.2 PE=3 SV=1)

HSP 1 Score: 528.1 bits (1359), Expect = 6.200e-147
Identity = 250/266 (93.98%), Postives = 262/266 (98.50%), Query Frame = 1


		  
Query: 1   MASSTMALSSPAFGGKAVKLNPSTSDMIGEGRISMRKSAGKPKNVSSGSPWYGPDRVKYL 60
           MASSTMALSSP+  GKA+KL P+ S+++GEGR++MRK+AGKPKNVSSGSPWYGPDRVKYL
Sbjct: 1   MASSTMALSSPSLAGKAIKLGPTASEILGEGRVTMRKTAGKPKNVSSGSPWYGPDRVKYL 60

Query: 61  GPFSGEAPSYLTGEFPGDYGWDTAGLSADPETFSKNRELEVIHCRWAMLGALGCVFPELL 120
           GPFSGEAPSYLTGEFPGDYGWDTAGLSADPETFSKNRELEVIHCRWAMLGALGCVFPELL
Sbjct: 61  GPFSGEAPSYLTGEFPGDYGWDTAGLSADPETFSKNRELEVIHCRWAMLGALGCVFPELL 120

Query: 121 ARNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWACQVILMGAVEGYRVAG 180
           ARNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWACQVILMGAVEGYR+AG
Sbjct: 121 ARNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWACQVILMGAVEGYRIAG 180

Query: 181 GPLGEVVDPLYPGGSFDPLGLAEDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGP 240
           GPLGEVVDPLYPGGSFDPLGLA+DPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGP
Sbjct: 181 GPLGEVVDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGP 240

Query: 241 LENLADHLADPVNNNAWNFATNFVPG 267
           LENLADHLADPVNNNAW+FATNFVPG
Sbjct: 241 LENLADHLADPVNNNAWSFATNFVPG 266

[Close]

BLAST of Spo10529.1 vs. UniProtKB/TrEMBL
Match: A0A0K9RBU9_SPIOL (Chlorophyll a-b binding protein, chloroplastic OS=Spinacia oleracea GN=SOVF_084380 PE=3 SV=1)

HSP 1 Score: 524.2 bits (1349), Expect = 9.000e-146
Identity = 250/266 (93.98%), Postives = 259/266 (97.37%), Query Frame = 1


		  
Query: 1   MASSTMALSSPAFGGKAVKLNPSTSDMIGEGRISMRKSAGKPKNVSSGSPWYGPDRVKYL 60
           MASSTMALSSP+  GKAVKL P+ S++IGEGRI+MRK+AGKPK V S SPWYGPDRVKYL
Sbjct: 1   MASSTMALSSPSLAGKAVKLGPTASEIIGEGRITMRKTAGKPKTVQSSSPWYGPDRVKYL 60

Query: 61  GPFSGEAPSYLTGEFPGDYGWDTAGLSADPETFSKNRELEVIHCRWAMLGALGCVFPELL 120
           GPFSGEAPSYLTGEFPGDYGWDTAGLSADPETF+KNRELEVIHCRWAMLGALGCVFPELL
Sbjct: 61  GPFSGEAPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELL 120

Query: 121 ARNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWACQVILMGAVEGYRVAG 180
           ARNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWACQVILMGAVEGYR+AG
Sbjct: 121 ARNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWACQVILMGAVEGYRIAG 180

Query: 181 GPLGEVVDPLYPGGSFDPLGLAEDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGP 240
           GPLGEVVDPLYPGGSFDPLGLA+DPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGP
Sbjct: 181 GPLGEVVDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGP 240

Query: 241 LENLADHLADPVNNNAWNFATNFVPG 267
           LENLADHLADPVNNNAWNFATNFVPG
Sbjct: 241 LENLADHLADPVNNNAWNFATNFVPG 266

[Close]

BLAST of Spo10529.1 vs. UniProtKB/TrEMBL
Match: B3WFZ6_SPIOL (Chlorophyll a-b binding protein, chloroplastic OS=Spinacia oleracea GN=lhcb1.3 PE=3 SV=1)

HSP 1 Score: 523.1 bits (1346), Expect = 2.000e-145
Identity = 249/266 (93.61%), Postives = 259/266 (97.37%), Query Frame = 1


		  
Query: 1   MASSTMALSSPAFGGKAVKLNPSTSDMIGEGRISMRKSAGKPKNVSSGSPWYGPDRVKYL 60
           MASSTMALSSP+  GKAVKL P+ S++IGEGRI+MRK+AGKPK V S SPWYGPDRVKYL
Sbjct: 1   MASSTMALSSPSLAGKAVKLGPTASEIIGEGRITMRKTAGKPKTVQSSSPWYGPDRVKYL 60

Query: 61  GPFSGEAPSYLTGEFPGDYGWDTAGLSADPETFSKNRELEVIHCRWAMLGALGCVFPELL 120
           GPFSGE+PSYLTGEFPGDYGWDTAGLSADPETF+KNRELEVIHCRWAMLGALGCVFPELL
Sbjct: 61  GPFSGESPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELL 120

Query: 121 ARNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWACQVILMGAVEGYRVAG 180
           ARNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWACQVILMGAVEGYR+AG
Sbjct: 121 ARNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWACQVILMGAVEGYRIAG 180

Query: 181 GPLGEVVDPLYPGGSFDPLGLAEDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGP 240
           GPLGEVVDPLYPGGSFDPLGLA+DPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGP
Sbjct: 181 GPLGEVVDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGP 240

Query: 241 LENLADHLADPVNNNAWNFATNFVPG 267
           LENLADHLADPVNNNAWNFATNFVPG
Sbjct: 241 LENLADHLADPVNNNAWNFATNFVPG 266

[Close]

BLAST of Spo10529.1 vs. UniProtKB/TrEMBL
Match: D2T2F7_SPIOL (Chlorophyll a-b binding protein, chloroplastic OS=Spinacia oleracea GN=lhcb1.4 PE=3 SV=1)

HSP 1 Score: 523.1 bits (1346), Expect = 2.000e-145
Identity = 247/266 (92.86%), Postives = 261/266 (98.12%), Query Frame = 1


		  
Query: 1   MASSTMALSSPAFGGKAVKLNPSTSDMIGEGRISMRKSAGKPKNVSSGSPWYGPDRVKYL 60
           MAS++MALSSP+  GKA+KL P+ S+++ EGR++MRK+AGKPKNVSSGSPWYGPDRVKYL
Sbjct: 1   MASTSMALSSPSLAGKAIKLGPTASEILSEGRVTMRKTAGKPKNVSSGSPWYGPDRVKYL 60

Query: 61  GPFSGEAPSYLTGEFPGDYGWDTAGLSADPETFSKNRELEVIHCRWAMLGALGCVFPELL 120
           GPFSGEAPSYLTGEFPGDYGWDTAGLSADPETFSKNRELEVIHCRWAMLGALGCVFPELL
Sbjct: 61  GPFSGEAPSYLTGEFPGDYGWDTAGLSADPETFSKNRELEVIHCRWAMLGALGCVFPELL 120

Query: 121 ARNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWACQVILMGAVEGYRVAG 180
           ARNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWACQVILMGAVEGYR+AG
Sbjct: 121 ARNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWACQVILMGAVEGYRIAG 180

Query: 181 GPLGEVVDPLYPGGSFDPLGLAEDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGP 240
           GPLGEVVDPLYPGGSFDPLGLA+DPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGP
Sbjct: 181 GPLGEVVDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGP 240

Query: 241 LENLADHLADPVNNNAWNFATNFVPG 267
           LENLADHLADPVNNNAW+FATNFVPG
Sbjct: 241 LENLADHLADPVNNNAWSFATNFVPG 266

[Close]

BLAST of Spo10529.1 vs. ExPASy Swiss-Prot
Match: CB2A_SPIOL (Chlorophyll a-b binding protein, chloroplastic OS=Spinacia oleracea PE=1 SV=1)

HSP 1 Score: 523.1 bits (1346), Expect = 1.800e-147
Identity = 249/266 (93.61%), Postives = 259/266 (97.37%), Query Frame = 1


		  
Query: 1   MASSTMALSSPAFGGKAVKLNPSTSDMIGEGRISMRKSAGKPKNVSSGSPWYGPDRVKYL 60
           MASSTMALSSP+  GKAVKL P+ S++IGEGRI+MRK+AGKPK V S SPWYGPDRVKYL
Sbjct: 1   MASSTMALSSPSLAGKAVKLGPTASEIIGEGRITMRKTAGKPKTVQSSSPWYGPDRVKYL 60

Query: 61  GPFSGEAPSYLTGEFPGDYGWDTAGLSADPETFSKNRELEVIHCRWAMLGALGCVFPELL 120
           GPFSGE+PSYLTGEFPGDYGWDTAGLSADPETF+KNRELEVIHCRWAMLGALGCVFPELL
Sbjct: 61  GPFSGESPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELL 120

Query: 121 ARNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWACQVILMGAVEGYRVAG 180
           ARNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWACQVILMGAVEGYR+AG
Sbjct: 121 ARNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWACQVILMGAVEGYRIAG 180

Query: 181 GPLGEVVDPLYPGGSFDPLGLAEDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGP 240
           GPLGEVVDPLYPGGSFDPLGLA+DPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGP
Sbjct: 181 GPLGEVVDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGP 240

Query: 241 LENLADHLADPVNNNAWNFATNFVPG 267
           LENLADHLADPVNNNAWNFATNFVPG
Sbjct: 241 LENLADHLADPVNNNAWNFATNFVPG 266

[Close]

BLAST of Spo10529.1 vs. ExPASy Swiss-Prot
Match: CB24_TOBAC (Chlorophyll a-b binding protein 40, chloroplastic OS=Nicotiana tabacum GN=CAB40 PE=2 SV=1)

HSP 1 Score: 516.2 bits (1328), Expect = 2.200e-145
Identity = 245/266 (92.11%), Postives = 259/266 (97.37%), Query Frame = 1


		  
Query: 1   MASSTMALSSPAFGGKAVKLNPSTSDMIGEGRISMRKSAGKPKNVSSGSPWYGPDRVKYL 60
           MA+STMALSSP+F GKAVKL+PS+S++ G G+++MRK+A K K VSSGSPWYGPDRVKYL
Sbjct: 1   MAASTMALSSPSFAGKAVKLSPSSSEITGNGKVTMRKTASKAKTVSSGSPWYGPDRVKYL 60

Query: 61  GPFSGEAPSYLTGEFPGDYGWDTAGLSADPETFSKNRELEVIHCRWAMLGALGCVFPELL 120
           GPFSGE+PSYLTGEFPGDYGWDTAGLSADPETF+KNRELEVIHCRWAMLGALGCVFPELL
Sbjct: 61  GPFSGESPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELL 120

Query: 121 ARNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWACQVILMGAVEGYRVAG 180
           ARNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWACQV+LMGAVEGYRVAG
Sbjct: 121 ARNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWACQVVLMGAVEGYRVAG 180

Query: 181 GPLGEVVDPLYPGGSFDPLGLAEDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGP 240
           GPLGEVVDPLYPGGSFDPLGLAEDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGP
Sbjct: 181 GPLGEVVDPLYPGGSFDPLGLAEDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGP 240

Query: 241 LENLADHLADPVNNNAWNFATNFVPG 267
           LENLADHLADPVNNNAW +ATNFVPG
Sbjct: 241 LENLADHLADPVNNNAWAYATNFVPG 266

[Close]

BLAST of Spo10529.1 vs. ExPASy Swiss-Prot
Match: CB2G_SOLLC (Chlorophyll a-b binding protein 3C, chloroplastic OS=Solanum lycopersicum GN=CAB3C PE=3 SV=1)

HSP 1 Score: 510.4 bits (1313), Expect = 1.200e-143
Identity = 243/266 (91.35%), Postives = 256/266 (96.24%), Query Frame = 1


		  
Query: 1   MASSTMALSSPAFGGKAVKLNPSTSDMIGEGRISMRKSAGKPKNVSSGSPWYGPDRVKYL 60
           MA+STMALSS  F GKAVKL+PS+S++ G GR++MRK+A K K  SSGSPWYGPDRVKYL
Sbjct: 1   MATSTMALSSSTFAGKAVKLSPSSSEITGNGRVTMRKTATKAKPASSGSPWYGPDRVKYL 60

Query: 61  GPFSGEAPSYLTGEFPGDYGWDTAGLSADPETFSKNRELEVIHCRWAMLGALGCVFPELL 120
           GPFSGE+PSYLTGEFPGDYGWDTAGLSADPETF+KNRELEVIHCRWAMLGALGCVFPELL
Sbjct: 61  GPFSGESPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELL 120

Query: 121 ARNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWACQVILMGAVEGYRVAG 180
           ARNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWACQV+LMGAVEGYR+AG
Sbjct: 121 ARNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWACQVVLMGAVEGYRIAG 180

Query: 181 GPLGEVVDPLYPGGSFDPLGLAEDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGP 240
           GPLGEVVDPLYPGGSFDPLGLA+DPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGP
Sbjct: 181 GPLGEVVDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGP 240

Query: 241 LENLADHLADPVNNNAWNFATNFVPG 267
           LENLADHLADPVNNNAW FATNFVPG
Sbjct: 241 LENLADHLADPVNNNAWAFATNFVPG 266

[Close]

BLAST of Spo10529.1 vs. ExPASy Swiss-Prot
Match: CB21_TOBAC (Chlorophyll a-b binding protein 16, chloroplastic OS=Nicotiana tabacum GN=CAB16 PE=2 SV=1)

HSP 1 Score: 509.2 bits (1310), Expect = 2.700e-143
Identity = 244/266 (91.73%), Postives = 258/266 (96.99%), Query Frame = 1


		  
Query: 1   MASSTMALSSPAFGGKAVKLNPSTSDMIGEGRISMRKSAGKPKNVSSGSPWYGPDRVKYL 60
           MA+ST ALSSP F GKAVKL+PS+S++ G G+++MRK+A K K VSSGSPWYGPDRVKYL
Sbjct: 1   MAASTTALSSP-FAGKAVKLSPSSSEVTGNGKVTMRKTASKAKPVSSGSPWYGPDRVKYL 60

Query: 61  GPFSGEAPSYLTGEFPGDYGWDTAGLSADPETFSKNRELEVIHCRWAMLGALGCVFPELL 120
           GPFSGE+PSYLTGEFPGDYGWDTAGLSADPETF+KNRELEVIHCRWAMLGALGCVFPELL
Sbjct: 61  GPFSGESPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELL 120

Query: 121 ARNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWACQVILMGAVEGYRVAG 180
           ARNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWACQV+LMGAVEGYRVAG
Sbjct: 121 ARNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWACQVVLMGAVEGYRVAG 180

Query: 181 GPLGEVVDPLYPGGSFDPLGLAEDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGP 240
           GPLGEVVDPLYPGGSFDPLGLAEDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGP
Sbjct: 181 GPLGEVVDPLYPGGSFDPLGLAEDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGP 240

Query: 241 LENLADHLADPVNNNAWNFATNFVPG 267
           LENLADHLADPVNNNAW++ATNFVPG
Sbjct: 241 LENLADHLADPVNNNAWSYATNFVPG 265

[Close]

BLAST of Spo10529.1 vs. ExPASy Swiss-Prot
Match: CB25_TOBAC (Chlorophyll a-b binding protein 50, chloroplastic OS=Nicotiana tabacum GN=CAB50 PE=2 SV=1)

HSP 1 Score: 506.9 bits (1304), Expect = 1.300e-142
Identity = 240/266 (90.23%), Postives = 257/266 (96.62%), Query Frame = 1


		  
Query: 1   MASSTMALSSPAFGGKAVKLNPSTSDMIGEGRISMRKSAGKPKNVSSGSPWYGPDRVKYL 60
           MA++TMALSS +F GKAVKL+PS+S++ G G+++MRK+  K K +SSGSPWYGPDRVKYL
Sbjct: 1   MAAATMALSSSSFAGKAVKLSPSSSEITGNGKVTMRKTVTKAKPLSSGSPWYGPDRVKYL 60

Query: 61  GPFSGEAPSYLTGEFPGDYGWDTAGLSADPETFSKNRELEVIHCRWAMLGALGCVFPELL 120
           GPFSGE+PSYLTGEFPGDYGWDTAGLSADPETF+KNRELEVIHCRWAMLGALGCVFPELL
Sbjct: 61  GPFSGESPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELL 120

Query: 121 ARNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWACQVILMGAVEGYRVAG 180
           ARNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWACQV+LMGAVEGYRVAG
Sbjct: 121 ARNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWACQVVLMGAVEGYRVAG 180

Query: 181 GPLGEVVDPLYPGGSFDPLGLAEDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGP 240
           GPLGEVVDPLYPGGSFDPLGLAEDPEAFAELKVK IKNGRLAMFSMFGFFVQAIVTGKGP
Sbjct: 181 GPLGEVVDPLYPGGSFDPLGLAEDPEAFAELKVKHIKNGRLAMFSMFGFFVQAIVTGKGP 240

Query: 241 LENLADHLADPVNNNAWNFATNFVPG 267
           LENLADHLADPVNNNAW++ATNFVPG
Sbjct: 241 LENLADHLADPVNNNAWSYATNFVPG 266

[Close]

BLAST of Spo10529.1 vs. TAIR (Arabidopsis)
Match: AT1G29930.1 (chlorophyll A/B binding protein 1)

HSP 1 Score: 483.4 bits (1243), Expect = 8.900e-137
Identity = 235/267 (88.01%), Postives = 250/267 (93.63%), Query Frame = 1


		  
Query: 1   MASSTMALSSPAFGGKAVKLNPSTSDMIGEGRISMRKSAGKPKNVSSGSPWYGPDRVKYL 60
           MA+STMALSSPAF GKAVKL+P+ S+++G GR++MRK+  KPK   SGSPWYG DRVKYL
Sbjct: 1   MAASTMALSSPAFAGKAVKLSPAASEVLGSGRVTMRKTVAKPKG-PSGSPWYGSDRVKYL 60

Query: 61  GPFSGEAPSYLTGEFPGDYGWDTAGLSADPETFSKNRELEVIHCRWAMLGALGCVFPELL 120
           GPFSGE+PSYLTGEFPGDYGWDTAGLSADPETF++NRELEVIH RWAMLGALGCVFPELL
Sbjct: 61  GPFSGESPSYLTGEFPGDYGWDTAGLSADPETFARNRELEVIHSRWAMLGALGCVFPELL 120

Query: 121 ARNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWACQVILMGAVEGYRVAG 180
           ARNGVKFGEAVWFKAGSQIFS+GGLDYLGNPSLVHAQSILAIWA QVILMGAVEGYRVAG
Sbjct: 121 ARNGVKFGEAVWFKAGSQIFSDGGLDYLGNPSLVHAQSILAIWATQVILMGAVEGYRVAG 180

Query: 181 -GPLGEVVDPLYPGGSFDPLGLAEDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKG 240
            GPLGE  D LYPGGSFDPLGLA DPEAFAELKVKE+KNGRLAMFSMFGFFVQAIVTGKG
Sbjct: 181 NGPLGEAEDLLYPGGSFDPLGLATDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKG 240

Query: 241 PLENLADHLADPVNNNAWNFATNFVPG 267
           P+ENLADHLADPVNNNAW FATNFVPG
Sbjct: 241 PIENLADHLADPVNNNAWAFATNFVPG 266

[Close]

BLAST of Spo10529.1 vs. TAIR (Arabidopsis)
Match: AT1G29920.1 (chlorophyll A/B-binding protein 2)

HSP 1 Score: 481.5 bits (1238), Expect = 3.400e-136
Identity = 234/267 (87.64%), Postives = 249/267 (93.26%), Query Frame = 1


		  
Query: 1   MASSTMALSSPAFGGKAVKLNPSTSDMIGEGRISMRKSAGKPKNVSSGSPWYGPDRVKYL 60
           MA+STMALSSPAF GKAV L+P+ S+++G GR++MRK+  KPK   SGSPWYG DRVKYL
Sbjct: 1   MAASTMALSSPAFAGKAVNLSPAASEVLGSGRVTMRKTVAKPKG-PSGSPWYGSDRVKYL 60

Query: 61  GPFSGEAPSYLTGEFPGDYGWDTAGLSADPETFSKNRELEVIHCRWAMLGALGCVFPELL 120
           GPFSGE+PSYLTGEFPGDYGWDTAGLSADPETF++NRELEVIH RWAMLGALGCVFPELL
Sbjct: 61  GPFSGESPSYLTGEFPGDYGWDTAGLSADPETFARNRELEVIHSRWAMLGALGCVFPELL 120

Query: 121 ARNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWACQVILMGAVEGYRVAG 180
           ARNGVKFGEAVWFKAGSQIFS+GGLDYLGNPSLVHAQSILAIWA QVILMGAVEGYRVAG
Sbjct: 121 ARNGVKFGEAVWFKAGSQIFSDGGLDYLGNPSLVHAQSILAIWATQVILMGAVEGYRVAG 180

Query: 181 -GPLGEVVDPLYPGGSFDPLGLAEDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKG 240
            GPLGE  D LYPGGSFDPLGLA DPEAFAELKVKE+KNGRLAMFSMFGFFVQAIVTGKG
Sbjct: 181 NGPLGEAEDLLYPGGSFDPLGLATDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKG 240

Query: 241 PLENLADHLADPVNNNAWNFATNFVPG 267
           P+ENLADHLADPVNNNAW FATNFVPG
Sbjct: 241 PIENLADHLADPVNNNAWAFATNFVPG 266

[Close]

BLAST of Spo10529.1 vs. TAIR (Arabidopsis)
Match: AT1G29910.1 (chlorophyll A/B binding protein 3)

HSP 1 Score: 481.5 bits (1238), Expect = 3.400e-136
Identity = 234/267 (87.64%), Postives = 249/267 (93.26%), Query Frame = 1


		  
Query: 1   MASSTMALSSPAFGGKAVKLNPSTSDMIGEGRISMRKSAGKPKNVSSGSPWYGPDRVKYL 60
           MA+STMALSSPAF GKAV L+P+ S+++G GR++MRK+  KPK   SGSPWYG DRVKYL
Sbjct: 1   MAASTMALSSPAFAGKAVNLSPAASEVLGSGRVTMRKTVAKPKG-PSGSPWYGSDRVKYL 60

Query: 61  GPFSGEAPSYLTGEFPGDYGWDTAGLSADPETFSKNRELEVIHCRWAMLGALGCVFPELL 120
           GPFSGE+PSYLTGEFPGDYGWDTAGLSADPETF++NRELEVIH RWAMLGALGCVFPELL
Sbjct: 61  GPFSGESPSYLTGEFPGDYGWDTAGLSADPETFARNRELEVIHSRWAMLGALGCVFPELL 120

Query: 121 ARNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWACQVILMGAVEGYRVAG 180
           ARNGVKFGEAVWFKAGSQIFS+GGLDYLGNPSLVHAQSILAIWA QVILMGAVEGYRVAG
Sbjct: 121 ARNGVKFGEAVWFKAGSQIFSDGGLDYLGNPSLVHAQSILAIWATQVILMGAVEGYRVAG 180

Query: 181 -GPLGEVVDPLYPGGSFDPLGLAEDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKG 240
            GPLGE  D LYPGGSFDPLGLA DPEAFAELKVKE+KNGRLAMFSMFGFFVQAIVTGKG
Sbjct: 181 NGPLGEAEDLLYPGGSFDPLGLATDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKG 240

Query: 241 PLENLADHLADPVNNNAWNFATNFVPG 267
           P+ENLADHLADPVNNNAW FATNFVPG
Sbjct: 241 PIENLADHLADPVNNNAWAFATNFVPG 266

[Close]

BLAST of Spo10529.1 vs. TAIR (Arabidopsis)
Match: AT2G34420.1 (photosystem II light harvesting complex gene B1B2)

HSP 1 Score: 479.2 bits (1232), Expect = 1.700e-135
Identity = 237/267 (88.76%), Postives = 247/267 (92.51%), Query Frame = 1


		  
Query: 1   MASSTMALSSPAFGGKAVKLNPSTSDMIGEGRISMRKSAGKPKNVSSGSPWYGPDRVKYL 60
           MASSTMALSSPAF GKAVK  P+ SD++G GR++MRK+  KPK   SGSPWYG DRVKYL
Sbjct: 1   MASSTMALSSPAFAGKAVK--PAASDVLGSGRVTMRKTVAKPKG-PSGSPWYGSDRVKYL 60

Query: 61  GPFSGEAPSYLTGEFPGDYGWDTAGLSADPETFSKNRELEVIHCRWAMLGALGCVFPELL 120
           GPFSGE PSYLTGEFPGDYGWDTAGLSADPETF++NRELEVIH RWAMLGALGCVFPELL
Sbjct: 61  GPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFARNRELEVIHSRWAMLGALGCVFPELL 120

Query: 121 ARNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWACQVILMGAVEGYRVAG 180
           ARNGVKFGEAVWFKAGSQIFS+GGLDYLGNPSLVHAQSILAIWA QVILMGAVEGYRVAG
Sbjct: 121 ARNGVKFGEAVWFKAGSQIFSDGGLDYLGNPSLVHAQSILAIWATQVILMGAVEGYRVAG 180

Query: 181 -GPLGEVVDPLYPGGSFDPLGLAEDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKG 240
            GPLGE  D LYPGGSFDPLGLA DPEAFAELKVKE+KNGRLAMFSMFGFFVQAIVTGKG
Sbjct: 181 DGPLGEAEDLLYPGGSFDPLGLATDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKG 240

Query: 241 PLENLADHLADPVNNNAWNFATNFVPG 267
           PLENLADHLADPVNNNAW FATNFVPG
Sbjct: 241 PLENLADHLADPVNNNAWAFATNFVPG 264

[Close]

BLAST of Spo10529.1 vs. TAIR (Arabidopsis)
Match: AT2G34430.1 (light-harvesting chlorophyll-protein complex II subunit B1)

HSP 1 Score: 473.8 bits (1218), Expect = 7.100e-134
Identity = 236/267 (88.39%), Postives = 246/267 (92.13%), Query Frame = 1


		  
Query: 1   MASSTMALSSPAFGGKAVKLNPSTSDMIGEGRISMRKSAGKPKNVSSGSPWYGPDRVKYL 60
           MA+STMALSSPA  GKAVKL+P+ S++ G GRI+MRK A KP    SGSPWYG DRVKYL
Sbjct: 1   MAASTMALSSPALTGKAVKLSPAASEVFGTGRITMRK-ASKPTG-PSGSPWYGSDRVKYL 60

Query: 61  GPFSGEAPSYLTGEFPGDYGWDTAGLSADPETFSKNRELEVIHCRWAMLGALGCVFPELL 120
           GPFSGE PSYLTGEFPGDYGWDTAGLSADPETF++NRELEVIH RWAMLGALGCVFPELL
Sbjct: 61  GPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFARNRELEVIHSRWAMLGALGCVFPELL 120

Query: 121 ARNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWACQVILMGAVEGYRVAG 180
           ARNGVKFGEAVWFKAGSQIFS+GGLDYLGNPSLVHAQSILAIWA QVILMGAVEGYRVAG
Sbjct: 121 ARNGVKFGEAVWFKAGSQIFSDGGLDYLGNPSLVHAQSILAIWATQVILMGAVEGYRVAG 180

Query: 181 -GPLGEVVDPLYPGGSFDPLGLAEDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKG 240
            GPLGE  D LYPGGSFDPLGLA DPEAFAELKVKE+KNGRLAMFSMFGFFVQAIVTGKG
Sbjct: 181 DGPLGEAEDLLYPGGSFDPLGLATDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKG 240

Query: 241 PLENLADHLADPVNNNAWNFATNFVPG 267
           PLENLADHLADPVNNNAW FATNFVPG
Sbjct: 241 PLENLADHLADPVNNNAWAFATNFVPG 265

The following BLAST results are available for this feature:

BLAST of Spo10529.1 vs. NCBI nr
BLAST of Spo10529.1 vs. UniProtKB/TrEMBL
BLAST of Spo10529.1 vs. ExPASy Swiss-Prot
BLAST of Spo10529.1 vs. TAIR (Arabidopsis)

BLAST of Spo10529.1 vs. NCBI nr
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. NCBI nr)
Total hits: 5


Match Name	E-value	Identity	Description
gi\|133917263\|emb\|CAJ77391.1\|	7.6e-154	100.	major chlorophyll a/b binding ...	[more]
gi\|133917261\|emb\|CAJ77390.1\|	9.0e-147	93.9	major chlorophyll a/b binding ...	[more]
gi\|902212423\|gb\|KNA16961.1\|	1.3e-145	93.9	hypothetical protein SOVF_0843...	[more]
gi\|283549609\|emb\|CAX64458.1\|	2.9e-145	92.8	major chlorophyll a/b binding ...	[more]
gi\|115780\|sp\|P12333.1\|CB2A_SPIOL	2.9e-145	93.6	RecName: Full=Chlorophyll a-b ...	[more]

BLAST of Spo10529.1 vs. UniProtKB/TrEMBL
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. UniprotKB/TrEMBL)
Total hits: 5


Match Name	E-value	Identity	Description
A4F3R4_SPIOL	5.3e-154	100.	Chlorophyll a-b binding protei...	[more]
A4F3R3_SPIOL	6.2e-147	93.9	Chlorophyll a-b binding protei...	[more]
A0A0K9RBU9_SPIOL	9.0e-146	93.9	Chlorophyll a-b binding protei...	[more]
B3WFZ6_SPIOL	2.0e-145	93.6	Chlorophyll a-b binding protei...	[more]
D2T2F7_SPIOL	2.0e-145	92.8	Chlorophyll a-b binding protei...	[more]

BLAST of Spo10529.1 vs. ExPASy Swiss-Prot
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. ExPASy SwissProt)
Total hits: 5


Match Name	E-value	Identity	Description
CB2A_SPIOL	1.8e-147	93.6	Chlorophyll a-b binding protei...	[more]
CB24_TOBAC	2.2e-145	92.1	Chlorophyll a-b binding protei...	[more]
CB2G_SOLLC	1.2e-143	91.3	Chlorophyll a-b binding protei...	[more]
CB21_TOBAC	2.7e-143	91.7	Chlorophyll a-b binding protei...	[more]
CB25_TOBAC	1.3e-142	90.2	Chlorophyll a-b binding protei...	[more]

BLAST of Spo10529.1 vs. TAIR (Arabidopsis)
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. TAIR)
Total hits: 5


Match Name	E-value	Identity	Description
AT1G29930.1	8.9e-137	88.0	chlorophyll A/B binding protei...	[more]
AT1G29920.1	3.4e-136	87.6	chlorophyll A/B-binding protei...	[more]
AT1G29910.1	3.4e-136	87.6	chlorophyll A/B binding protei...	[more]
AT2G34420.1	1.7e-135	88.7	photosystem II light harvestin...	[more]
AT2G34430.1	7.1e-134	88.3	light-harvesting chlorophyll-p...	[more]

InterPro

Analysis Name: InterPro Annotations of S. oleracea
Date Performed: 2018-06-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001344	Chlorophyll A-B binding protein, plant	PANTHER	PTHR21649	CHLOROPHYLL A/B BINDING PROTEIN	coord: 1..266 score: 2.1E
IPR022796	Chlorophyll A-B binding protein	PFAM	PF00504	Chloroa_b-bind	coord: 67..233 score: 4.0
IPR023329	Chlorophyll a/b binding protein domain	GENE3D	1.10.3460.10		coord: 60..258 score: 8.5
IPR023329	Chlorophyll a/b binding protein domain	unknown	SSF103511	Chlorophyll a-b binding protein	coord: 50..264 score: 2.35
None	No IPR available	PANTHER	PTHR21649:SF26	CHLOROPHYLL A-B BINDING PROTEIN 1, CHLOROPLASTIC-RELATED	coord: 1..266 score: 2.1E

GO Annotation

GO Assignments

This mRNA is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0009765	photosynthesis, light harvesting
biological_process	GO:0018298	protein-chromophore linkage
cellular_component	GO:0016020	membrane
cellular_component	GO:0009535	chloroplast thylakoid membrane
cellular_component	GO:0016021	integral component of membrane
cellular_component	GO:0009522	photosystem I
cellular_component	GO:0009523	photosystem II
molecular_function	GO:0016168	chlorophyll binding
molecular_function	GO:0046872	metal ion binding