Overview
Sequences
The following sequences are available for this feature:
Legend: polypeptideCDSexon Hold the cursor over a type above to highlight its positions in the sequence below.ATGAGTTCAATTCTGGGGCGATGTTTCTCTCTTTTAGCAATATACTTGGCCATGACTCAAGTATGCTTGGGAAGTCCAAACTCGGTGGAAAAAGTGCAGTTAGATTTTTACTATGAAAGCTTGTGTCCTTACTGTGCTGACTTTATCACCAAAGAACTTCCCATCATCTTTGACAATGGGTTGATTGATATTGTTAATCTTCGCCTTATTCCTTGGGGAAACGCTAGGATCAGTACAAGCAACTCCTTTGATTGCCAGGTATACATCTTTATCAACTCCTTTATTTTCCATGATCAATCGAGTTAAGTGTTACGTTTTCATGTTCGGGCTCTTTAGTCCAAGCTTATATAAATTCATATATTTAGACTGATGATTTATTATCTGTTTTTGGTTGATGATTCATTGCAGCATGGTTCTACTGAATGCTTATTTAATTCTGTTGAAGCTTGTGCAATTGCTGCTTGGCCTAATCCGGTAAATTAAAACTCTTTTGATTTATGCCGTTAATCATAAATATACTTAAATTATTATGTTAAGATGACATGGGAGTATTTCACATTAACCCCGAGTTAGAATCTAACTCTTTGACAGAAAGACCACTTCCCATTTATTACTTGTGTTGAGAATCAAGTTTCCAAAGGCGAGTACAACCAATGGGAAACTTGTTTCAAGAAGTTGGGTTTGGATCCAAATCCTGTTACTAGTTGTTACAAAAGTCAATCTGGCAAAAAGGTCAGTCTTCTTCTACGTACTCTTGTTTTAATTTGTGCTCTATTTTCACTGTACGTTTCTTGTTAGTTTGCCTCTAGAACTCAAGAATACAGAGGTACGATTCAATAGAATAGATCATGTTCAAGTAAGGTCGTTCTTGTTTAATGTATTCCAAAATTAAATCATTGATGGTCCGTTTGGTAGTCGATAATAAACGGTGGGAATGGGAATAAATCTCAATGTTATTTGGCAAGAAATTAAAATCACGATGTCCATGTTAATGAAATGTTATCTCAAGCTTGGTGTTTTTCTTTATAAATTTGCATTCCCACTTAATACCACTCCCCAAATGGTAATGGATGGTAATGGAAATTTATAAAGAAAAAGAGATAATTTTGAGTGAATTAGCATTACCATTGGAATGGATATTGATTTTCCTTACAAATTTACATACAAATTCATTCCCATTGACACCATTTATGATCGGCAACCTAACGGGCCGTGAATTCCATGCAGCTTCAGAAAAACTACGCAGCCCTAACTGATGCACTCCAACCTCATCATGAATATGTGCCTTGGGTAGTTGTGGCAGGAGAACCCCTTCGTCAGGTGACAACTATCCATCTTTTTCTTCTCATTAACAACTTAACTATTGTTATTTATGTTGTTCTTCAGGATGATTAATAACAACACTAGTTCTAAACTTCTAATTAATTACATATTTTCTGTGTTATAGGACAATAATAACTTTATAAGTTATATCTGCAAAGCTTACGAAGGAGATCCACCTAGTGCTTGCCAGGAAGCATCCCTTGCAAGTATTTTCAAAGAGAAGATTGCTCATGTCTTTTGTCCTGTGTCTAGGGGATGA ATGAGTTCAATTCTGGGGCGATGTTTCTCTCTTTTAGCAATATACTTGGCCATGACTCAAGTATGCTTGGGAAGTCCAAACTCGGTGGAAAAAGTGCAGTTAGATTTTTACTATGAAAGCTTGTGTCCTTACTGTGCTGACTTTATCACCAAAGAACTTCCCATCATCTTTGACAATGGGTTGATTGATATTGTTAATCTTCGCCTTATTCCTTGGGGAAACGCTAGGATCAGTACAAGCAACTCCTTTGATTGCCAGCATGGTTCTACTGAATGCTTATTTAATTCTGTTGAAGCTTGTGCAATTGCTGCTTGGCCTAATCCGAAAGACCACTTCCCATTTATTACTTGTGTTGAGAATCAAGTTTCCAAAGGCGAGTACAACCAATGGGAAACTTGTTTCAAGAAGTTGGGTTTGGATCCAAATCCTGTTACTAGTTGTTACAAAAGTCAATCTGGCAAAAAGCTTCAGAAAAACTACGCAGCCCTAACTGATGCACTCCAACCTCATCATGAATATGTGCCTTGGGTAGTTGTGGCAGGAGAACCCCTTCGTCAGGACAATAATAACTTTATAAGTTATATCTGCAAAGCTTACGAAGGAGATCCACCTAGTGCTTGCCAGGAAGCATCCCTTGCAAGTATTTTCAAAGAGAAGATTGCTCATGTCTTTTGTCCTGTGTCTAGGGGATGA ATGAGTTCAATTCTGGGGCGATGTTTCTCTCTTTTAGCAATATACTTGGCCATGACTCAAGTATGCTTGGGAAGTCCAAACTCGGTGGAAAAAGTGCAGTTAGATTTTTACTATGAAAGCTTGTGTCCTTACTGTGCTGACTTTATCACCAAAGAACTTCCCATCATCTTTGACAATGGGTTGATTGATATTGTTAATCTTCGCCTTATTCCTTGGGGAAACGCTAGGATCAGTACAAGCAACTCCTTTGATTGCCAGCATGGTTCTACTGAATGCTTATTTAATTCTGTTGAAGCTTGTGCAATTGCTGCTTGGCCTAATCCGAAAGACCACTTCCCATTTATTACTTGTGTTGAGAATCAAGTTTCCAAAGGCGAGTACAACCAATGGGAAACTTGTTTCAAGAAGTTGGGTTTGGATCCAAATCCTGTTACTAGTTGTTACAAAAGTCAATCTGGCAAAAAGCTTCAGAAAAACTACGCAGCCCTAACTGATGCACTCCAACCTCATCATGAATATGTGCCTTGGGTAGTTGTGGCAGGAGAACCCCTTCGTCAGGACAATAATAACTTTATAAGTTATATCTGCAAAGCTTACGAAGGAGATCCACCTAGTGCTTGCCAGGAAGCATCCCTTGCAAGTATTTTCAAAGAGAAGATTGCTCATGTCTTTTGTCCTGTGTCTAGGGGATGA MSSILGRCFSLLAIYLAMTQVCLGSPNSVEKVQLDFYYESLCPYCADFITKELPIIFDNGLIDIVNLRLIPWGNARISTSNSFDCQHGSTECLFNSVEACAIAAWPNPKDHFPFITCVENQVSKGEYNQWETCFKKLGLDPNPVTSCYKSQSGKKLQKNYAALTDALQPHHEYVPWVVVAGEPLRQDNNNFISYICKAYEGDPPSACQEASLASIFKEKIAHVFCPVSRG Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
Homology
BLAST of Spo05134.1 vs. NCBI nr
Match: gi|902187233|gb|KNA10878.1| (hypothetical protein SOVF_140340 [Spinacia oleracea]) HSP 1 Score: 493.0 bits (1268), Expect = 2.800e-136 Identity = 230/230 (100.00%), Postives = 230/230 (100.00%), Query Frame = 1
BLAST of Spo05134.1 vs. NCBI nr
Match: gi|902173961|gb|KNA08335.1| (hypothetical protein SOVF_163510 [Spinacia oleracea]) HSP 1 Score: 341.7 bits (875), Expect = 1.000e-90 Identity = 156/223 (69.96%), Postives = 180/223 (80.72%), Query Frame = 1
BLAST of Spo05134.1 vs. NCBI nr
Match: gi|731349285|ref|XP_010685915.1| (PREDICTED: gamma-interferon-inducible lysosomal thiol reductase-like [Beta vulgaris subsp. vulgaris]) HSP 1 Score: 331.3 bits (848), Expect = 1.400e-87 Identity = 148/223 (66.37%), Postives = 176/223 (78.92%), Query Frame = 1
BLAST of Spo05134.1 vs. NCBI nr
Match: gi|731349287|ref|XP_010685916.1| (PREDICTED: gamma-interferon-inducible lysosomal thiol reductase-like [Beta vulgaris subsp. vulgaris]) HSP 1 Score: 320.5 bits (820), Expect = 2.400e-84 Identity = 149/222 (67.12%), Postives = 174/222 (78.38%), Query Frame = 1
BLAST of Spo05134.1 vs. NCBI nr
Match: gi|902187232|gb|KNA10877.1| (hypothetical protein SOVF_140330 [Spinacia oleracea]) HSP 1 Score: 316.2 bits (809), Expect = 4.600e-83 Identity = 142/222 (63.96%), Postives = 170/222 (76.58%), Query Frame = 1
BLAST of Spo05134.1 vs. UniProtKB/TrEMBL
Match: A0A0K9QVY6_SPIOL (Uncharacterized protein OS=Spinacia oleracea GN=SOVF_140340 PE=4 SV=1) HSP 1 Score: 493.0 bits (1268), Expect = 1.900e-136 Identity = 230/230 (100.00%), Postives = 230/230 (100.00%), Query Frame = 1
BLAST of Spo05134.1 vs. UniProtKB/TrEMBL
Match: A0A0K9QM37_SPIOL (Uncharacterized protein OS=Spinacia oleracea GN=SOVF_163510 PE=4 SV=1) HSP 1 Score: 341.7 bits (875), Expect = 7.100e-91 Identity = 156/223 (69.96%), Postives = 180/223 (80.72%), Query Frame = 1
BLAST of Spo05134.1 vs. UniProtKB/TrEMBL
Match: A0A0J8BZM6_BETVU (Uncharacterized protein OS=Beta vulgaris subsp. vulgaris GN=BVRB_7g175280 PE=4 SV=1) HSP 1 Score: 331.3 bits (848), Expect = 9.700e-88 Identity = 148/223 (66.37%), Postives = 176/223 (78.92%), Query Frame = 1
BLAST of Spo05134.1 vs. UniProtKB/TrEMBL
Match: A0A0K9QUB0_SPIOL (Uncharacterized protein OS=Spinacia oleracea GN=SOVF_140330 PE=4 SV=1) HSP 1 Score: 316.2 bits (809), Expect = 3.200e-83 Identity = 142/222 (63.96%), Postives = 170/222 (76.58%), Query Frame = 1
BLAST of Spo05134.1 vs. UniProtKB/TrEMBL
Match: A0A0J8BZF4_BETVU (Uncharacterized protein OS=Beta vulgaris subsp. vulgaris GN=BVRB_7g175290 PE=4 SV=1) HSP 1 Score: 307.4 bits (786), Expect = 1.500e-80 Identity = 137/205 (66.83%), Postives = 161/205 (78.54%), Query Frame = 1
BLAST of Spo05134.1 vs. ExPASy Swiss-Prot
Match: GILT_BOVIN (Gamma-interferon-inducible lysosomal thiol reductase OS=Bos taurus GN=IFI30 PE=2 SV=1) HSP 1 Score: 122.1 bits (305), Expect = 8.000e-27 Identity = 74/199 (37.19%), Postives = 108/199 (54.27%), Query Frame = 1
BLAST of Spo05134.1 vs. ExPASy Swiss-Prot
Match: GILT_PIG (Gamma-interferon-inducible-lysosomal thiol reductase OS=Sus scrofa GN=IFI30 PE=2 SV=1) HSP 1 Score: 121.3 bits (303), Expect = 1.400e-26 Identity = 75/194 (38.66%), Postives = 105/194 (54.12%), Query Frame = 1
BLAST of Spo05134.1 vs. ExPASy Swiss-Prot
Match: GILT_HUMAN (Gamma-interferon-inducible lysosomal thiol reductase OS=Homo sapiens GN=IFI30 PE=1 SV=3) HSP 1 Score: 120.2 bits (300), Expect = 3.000e-26 Identity = 67/187 (35.83%), Postives = 96/187 (51.34%), Query Frame = 1
BLAST of Spo05134.1 vs. ExPASy Swiss-Prot
Match: GILT_RAT (Gamma-interferon-inducible lysosomal thiol reductase OS=Rattus norvegicus GN=Ifi30 PE=2 SV=1) HSP 1 Score: 115.9 bits (289), Expect = 5.700e-25 Identity = 74/205 (36.10%), Postives = 103/205 (50.24%), Query Frame = 1
BLAST of Spo05134.1 vs. ExPASy Swiss-Prot
Match: YVRI_CAEEL (GILT-like protein F37H8.5 OS=Caenorhabditis elegans GN=F37H8.5 PE=1 SV=1) HSP 1 Score: 114.4 bits (285), Expect = 1.700e-24 Identity = 69/199 (34.67%), Postives = 109/199 (54.77%), Query Frame = 1
BLAST of Spo05134.1 vs. TAIR (Arabidopsis)
Match: AT1G07080.1 (Thioredoxin superfamily protein) HSP 1 Score: 225.7 bits (574), Expect = 2.900e-59 Identity = 101/194 (52.06%), Postives = 135/194 (69.59%), Query Frame = 1
BLAST of Spo05134.1 vs. TAIR (Arabidopsis)
Match: AT5G01580.1 (gamma interferon responsive lysosomal thiol (GILT) reductase family protein) HSP 1 Score: 183.3 bits (464), Expect = 1.600e-46 Identity = 86/209 (41.15%), Postives = 121/209 (57.89%), Query Frame = 1
BLAST of Spo05134.1 vs. TAIR (Arabidopsis)
Match: AT4G12890.1 (Gamma interferon responsive lysosomal thiol (GILT) reductase family protein) HSP 1 Score: 182.2 bits (461), Expect = 3.700e-46 Identity = 86/206 (41.75%), Postives = 124/206 (60.19%), Query Frame = 1
BLAST of Spo05134.1 vs. TAIR (Arabidopsis)
Match: AT4G12900.1 (Gamma interferon responsive lysosomal thiol (GILT) reductase family protein) HSP 1 Score: 172.6 bits (436), Expect = 2.900e-43 Identity = 81/186 (43.55%), Postives = 111/186 (59.68%), Query Frame = 1
BLAST of Spo05134.1 vs. TAIR (Arabidopsis)
Match: AT4G12870.1 (Gamma interferon responsive lysosomal thiol (GILT) reductase family protein) HSP 1 Score: 164.9 bits (416), Expect = 6.100e-41 Identity = 79/195 (40.51%), Postives = 117/195 (60.00%), Query Frame = 1
The following BLAST results are available for this feature:
BLAST of Spo05134.1 vs. NCBI nr
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. NCBI nr) Total hits: 5
BLAST of Spo05134.1 vs. UniProtKB/TrEMBL
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. UniprotKB/TrEMBL) Total hits: 5
BLAST of Spo05134.1 vs. ExPASy Swiss-Prot
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. ExPASy SwissProt) Total hits: 5
BLAST of Spo05134.1 vs. TAIR (Arabidopsis)
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. TAIR) Total hits: 5
InterPro
Analysis Name: InterPro Annotations of S. oleracea
Date Performed: 2018-06-29
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