Spo00070.1 (mRNA)

Overview
NameSpo00070.1
TypemRNA
OrganismSpinacia oleracea (Spinach)
DescriptionHistone H2B
LocationSuper_scaffold_70 : 919394 .. 921658 (-)
Sequence length615
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGCACCAAAGGCGGAGAAGAAGCCTGCCGAAAAGAAGCCCGCGGAGGAGAAGAAGGCCGCCGCCGCCGAGAAAGCTCCGGCTGAGAAGAAGCCAAAGGCCGGCAAGAAGCTTCCTAAGGAAGCCGGAGCTGCCGCTGGAGACAAGAAGAAGAAGAGACACAAGAAGAGCGTCGAGACTTACAAGATCTACATCTTCAAGGTTCTCAAGCAAGTTCACCCTGACATCGGAATTTCTAGCAAGGCGATGAGCATCATGAACAGCTTCATCAACGACATCTTCGAGAAGCTCGCTCAGGAATCCGCCAGACTTGCCCGCTACAACAAGAAGCCTACCATCACTTCCCGGGAGATTCAGACTGCTGTCAGGCTTGTTCTTCCCGGTGAACTCGCTAAGCACGCTGTCTCTGAAGGAACCAAGGCGGTTACTAAATTTACCAGCTCTTAAATGTTTTGATTTCAATGTTTTTAGGGTTTGTAAACAGTTGGATATGGGGAAATTGAAAAGAAATTTGAAGGTATTGGTGGATTTTGGTTTGTAAAATTTACTCAAGCTTGGTTGTTTAGATTAGTAAATGTTAGGATTTTAGGGTAATGTTGATGTTTGTTGAAATTGCCGTTGTTCTGTTTGCAGTAATTGAAATGATCAGAATAATTTTCTTTATATGGATCCTATCTCTCCGTTTGAATTGATTTTAAATAGTTTCTGTCTTGAATTGGTCTTGAGTTCCATCATATTGGTAGTCTACTGCTGCATAACATATTAAACTCCGTAGATTATGAATTTGATCATGTTTTCAATCACTTGGTAAAAGCAAATCATGCTGCTATGAAGCATGATTTCTGCAGACTTTACTTGTGCTAGGCAGGGTGAGATACCTGGAGTATCCAGCTACTGCTAGGTGAAACACTACAACTAAGGCGGAGAATGTTGATCTAACACTACAACTAAGGCGGAGAATGTTGATCTATCAGAGTATCATGCACAAGCGCACAACTACTAATAGTGCATAAGTATGTCAAGAGGAGGTAAAACTAGGAGTTTACACTTTACTGGCATATACTCTATGTAAGCAATTGATAGAATGTGTGATGGATGCTTTTGTTCTTGATTATTTGGTTGCAGTTCTGGTTATTTCCCCGAGCCTTCTCCTTTTCCTTGTTGGTGAATGGTGATCTGGTTTACTTTTCTATTGCCCCTTCATGCTTATGTATTTTTCATATCTGATTTTCTTAGTATTCAGTAGTTCAGCCTAATATTTTTTGGAAGACAGGGTGTTTCATTCTTCTTAGGAATTGTTTCTAAATCTTATATGATGGCATGATGCAGTAAGTTGAGCTCCATCTAGTCTATGTATGAAGGTTTTCTGATTCCTTTTTTGACACATTTCTTTCTCCCATTTTGTAAATTTGTGCAGTTGAAGTGATAGTTCATTTTACATCTGTATTACTAAATCACATTAGAAGTTGATTGAGAATGGTGTAAATGGAGTATGTGATATCTAACTTTTATGTTTTGTAATATGTGGCTTTTGATAATTTTTTTTACCACAAAGTGTTCTAATACTGTGTTATACAAGTTCTTATACTACTCATTTGAAGTTCTATTATTAGTGAATGTGTTTGATTGCTCTTCTGATTATAATAAGATATAATATTCTTTTTAGGCCTTGTTATTTTTATTGAATGTTACTTGGGCAGCTTACATTGAATATCAAATTATGATGTTGATACTGTGTTCTTTGTTTCGTATTGCTCAAATTGTGACTTTGTCAAGTAAATGTAAAATACTATGCTTTTTTAATTAAGTTCTGGTCTGGTTTCGATTAAGTATGTACTTACTGTTTGTAAATATTATTTATTGGATGCTAATTTGTTGTTGATCTGTGATGCAGGTTAACATTCATTTATGATATGTCTATGATTCTATGAAGATTTAGCTGTGTCACTTGTGTTATATGCGGAAAAGGAATGATCAGAACATTTTAGTTGTCCTGTTTGGCTACTGCATTTCGTCTCAAGTTTTTTGTACTATGATCGGTCTTAAATTTATCTTCTCATTGACCTGATATTGCATAGCACGGAATATGGTACGCGTACTTCCATACCAGTATACTTCCTTATGCAGGCAGCAGGCTATAGCTATATAGCTGAACAACAGTTGCTCCGGGAAAGCAGTTTAGCACTTAGGGCCTTAGGGGTGGCTGGCTTGAGTGATTTTTCTTCCTACAGATTGTTTTCGTACGCAGCTAGCACTTTAGCGTAG

mRNA sequence

ATGGCACCAAAGGCGGAGAAGAAGCCTGCCGAAAAGAAGCCCGCGGAGGAGAAGAAGGCCGCCGCCGCCGAGAAAGCTCCGGCTGAGAAGAAGCCAAAGGCCGGCAAGAAGCTTCCTAAGGAAGCCGGAGCTGCCGCTGGAGACAAGAAGAAGAAGAGACACAAGAAGAGCGTCGAGACTTACAAGATCTACATCTTCAAGGTTCTCAAGCAAGTTCACCCTGACATCGGAATTTCTAGCAAGGCGATGAGCATCATGAACAGCTTCATCAACGACATCTTCGAGAAGCTCGCTCAGGAATCCGCCAGACTTGCCCGCTACAACAAGAAGCCTACCATCACTTCCCGGGAGATTCAGACTGCTGTCAGGCTTGTTCTTCCCGGTGAACTCGCTAAGCACGCTGTCTCTGAAGGAACCAAGGCGTTCTGGTTATTTCCCCGAGCCTTCTCCTTTTCCTTGTTGGTGAATGGTGATCTGGCAGCAGGCTATAGCTATATAGCTGAACAACAGTTGCTCCGGGAAAGCAGTTTAGCACTTAGGGCCTTAGGGGTGGCTGGCTTGAGTGATTTTTCTTCCTACAGATTGTTTTCGTACGCAGCTAGCACTTTAGCGTAG

Coding sequence (CDS)

ATGGCACCAAAGGCGGAGAAGAAGCCTGCCGAAAAGAAGCCCGCGGAGGAGAAGAAGGCCGCCGCCGCCGAGAAAGCTCCGGCTGAGAAGAAGCCAAAGGCCGGCAAGAAGCTTCCTAAGGAAGCCGGAGCTGCCGCTGGAGACAAGAAGAAGAAGAGACACAAGAAGAGCGTCGAGACTTACAAGATCTACATCTTCAAGGTTCTCAAGCAAGTTCACCCTGACATCGGAATTTCTAGCAAGGCGATGAGCATCATGAACAGCTTCATCAACGACATCTTCGAGAAGCTCGCTCAGGAATCCGCCAGACTTGCCCGCTACAACAAGAAGCCTACCATCACTTCCCGGGAGATTCAGACTGCTGTCAGGCTTGTTCTTCCCGGTGAACTCGCTAAGCACGCTGTCTCTGAAGGAACCAAGGCGTTCTGGTTATTTCCCCGAGCCTTCTCCTTTTCCTTGTTGGTGAATGGTGATCTGGCAGCAGGCTATAGCTATATAGCTGAACAACAGTTGCTCCGGGAAAGCAGTTTAGCACTTAGGGCCTTAGGGGTGGCTGGCTTGAGTGATTTTTCTTCCTACAGATTGTTTTCGTACGCAGCTAGCACTTTAGCGTAG

Protein sequence

MAPKAEKKPAEKKPAEEKKAAAAEKAPAEKKPKAGKKLPKEAGAAAGDKKKKRHKKSVETYKIYIFKVLKQVHPDIGISSKAMSIMNSFINDIFEKLAQESARLARYNKKPTITSREIQTAVRLVLPGELAKHAVSEGTKAFWLFPRAFSFSLLVNGDLAAGYSYIAEQQLLRESSLALRALGVAGLSDFSSYRLFSYAASTLA
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameType
Spo00070Spo00070gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameType
Spo00070.1Spo00070.1-proteinpolypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameType
Spo00070.1.CDS.3Spo00070.1.CDS.3CDS
Spo00070.1.CDS.2Spo00070.1.CDS.2CDS
Spo00070.1.CDS.1Spo00070.1.CDS.1CDS


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameType
Spo00070.1.exon.3Spo00070.1.exon.3exon
Spo00070.1.exon.2Spo00070.1.exon.2exon
Spo00070.1.exon.1Spo00070.1.exon.1exon


Homology
[Close]
BLAST of Spo00070.1 vs. NCBI nr
Match: gi|902185838|gb|KNA10559.1| (hypothetical protein SOVF_143230 [Spinacia oleracea])

HSP 1 Score: 251.1 bits (640), Expect = 1.600e-63
Identity = 142/145 (97.93%), Postives = 142/145 (97.93%), Query Frame = 1 

		  

Query: 1   MAPKAEKKPAEKKPAEEKKAAAAEKAPAEKKPKAGKKLPKEAGAAAGDKKKKRHKKSVET 60
           MAPKAEKKPAEKKPAEEKKAAAAEKAPAEKKPKAGKKLPKEAGAAAGDKKKKRHKKSVET
Sbjct: 1   MAPKAEKKPAEKKPAEEKKAAAAEKAPAEKKPKAGKKLPKEAGAAAGDKKKKRHKKSVET 60

Query: 61  YKIYIFKVLKQVHPDIGISSKAMSIMNSFINDIFEKLAQESARLARYNKKPTITSREIQT 120
           YKIYIFKVLKQVHPDIGISSKAMSIMNSFINDIFEKLAQESARLARYNKKPTITSREIQT
Sbjct: 61  YKIYIFKVLKQVHPDIGISSKAMSIMNSFINDIFEKLAQESARLARYNKKPTITSREIQT 120

Query: 121 AVRLVLPGELAKHAVSEGTKAFWLF 146
           AVRLVLPGELAKHAVSEGTKA   F
Sbjct: 121 AVRLVLPGELAKHAVSEGTKAVTKF 145
[Close]
BLAST of Spo00070.1 vs. NCBI nr
Match: gi|902184879|gb|KNA10386.1| (hypothetical protein SOVF_144860 [Spinacia oleracea])

HSP 1 Score: 249.6 bits (636), Expect = 4.700e-63
Identity = 141/145 (97.24%), Postives = 141/145 (97.24%), Query Frame = 1 

		  

Query: 1   MAPKAEKKPAEKKPAEEKKAAAAEKAPAEKKPKAGKKLPKEAGAAAGDKKKKRHKKSVET 60
           MAPKAEKKPAEKKP EEKKAAAAEKAPAEKKPKAGKKLPKEAGAAAGDKKKKRHKKSVET
Sbjct: 1   MAPKAEKKPAEKKPVEEKKAAAAEKAPAEKKPKAGKKLPKEAGAAAGDKKKKRHKKSVET 60

Query: 61  YKIYIFKVLKQVHPDIGISSKAMSIMNSFINDIFEKLAQESARLARYNKKPTITSREIQT 120
           YKIYIFKVLKQVHPDIGISSKAMSIMNSFINDIFEKLAQESARLARYNKKPTITSREIQT
Sbjct: 61  YKIYIFKVLKQVHPDIGISSKAMSIMNSFINDIFEKLAQESARLARYNKKPTITSREIQT 120

Query: 121 AVRLVLPGELAKHAVSEGTKAFWLF 146
           AVRLVLPGELAKHAVSEGTKA   F
Sbjct: 121 AVRLVLPGELAKHAVSEGTKAVTKF 145
[Close]
BLAST of Spo00070.1 vs. NCBI nr
Match: gi|902233045|gb|KNA22906.1| (hypothetical protein SOVF_029910 [Spinacia oleracea])

HSP 1 Score: 247.7 bits (631), Expect = 1.800e-62
Identity = 140/145 (96.55%), Postives = 140/145 (96.55%), Query Frame = 1 

		  

Query: 1   MAPKAEKKPAEKKPAEEKKAAAAEKAPAEKKPKAGKKLPKEAGAAAGDKKKKRHKKSVET 60
           M PK EKKPAEKKPAEEKKAAAAEKAPAEKKPKAGKKLPKEAGAAAGDKKKKRHKKSVET
Sbjct: 1   MPPKGEKKPAEKKPAEEKKAAAAEKAPAEKKPKAGKKLPKEAGAAAGDKKKKRHKKSVET 60

Query: 61  YKIYIFKVLKQVHPDIGISSKAMSIMNSFINDIFEKLAQESARLARYNKKPTITSREIQT 120
           YKIYIFKVLKQVHPDIGISSKAMSIMNSFINDIFEKLAQESARLARYNKKPTITSREIQT
Sbjct: 61  YKIYIFKVLKQVHPDIGISSKAMSIMNSFINDIFEKLAQESARLARYNKKPTITSREIQT 120

Query: 121 AVRLVLPGELAKHAVSEGTKAFWLF 146
           AVRLVLPGELAKHAVSEGTKA   F
Sbjct: 121 AVRLVLPGELAKHAVSEGTKAVTKF 145
[Close]
BLAST of Spo00070.1 vs. NCBI nr
Match: gi|657986068|ref|XP_008385152.1| (PREDICTED: probable histone H2B.1 [Malus domestica])

HSP 1 Score: 242.3 bits (617), Expect = 7.500e-61
Identity = 137/145 (94.48%), Postives = 139/145 (95.86%), Query Frame = 1 

		  

Query: 1   MAPKAEKKPAEKKPAEEKKAAAAEKAPAEKKPKAGKKLPKEAGAAAGDKKKKRHKKSVET 60
           MAPKAEKKPAEKKPAEEKK+A AEKAPAEKKPKAGKKLPKEAGAAAGDKKKKR KKSVET
Sbjct: 1   MAPKAEKKPAEKKPAEEKKSAVAEKAPAEKKPKAGKKLPKEAGAAAGDKKKKRSKKSVET 60

Query: 61  YKIYIFKVLKQVHPDIGISSKAMSIMNSFINDIFEKLAQESARLARYNKKPTITSREIQT 120
           YKIYIFKVLKQVHPDIGISSKAM IMNSFINDIFEKLAQES+RLARYNKKPTITSREIQT
Sbjct: 61  YKIYIFKVLKQVHPDIGISSKAMGIMNSFINDIFEKLAQESSRLARYNKKPTITSREIQT 120

Query: 121 AVRLVLPGELAKHAVSEGTKAFWLF 146
           AVRLVLPGELAKHAVSEGTKA   F
Sbjct: 121 AVRLVLPGELAKHAVSEGTKAVTKF 145
[Close]
BLAST of Spo00070.1 vs. NCBI nr
Match: gi|731349098|ref|XP_010685822.1| (PREDICTED: histone H2B isoform X2 [Beta vulgaris subsp. vulgaris])

HSP 1 Score: 241.1 bits (614), Expect = 1.700e-60
Identity = 140/146 (95.89%), Postives = 141/146 (96.58%), Query Frame = 1 

		  

Query: 1   MAPKAEKKPAEKKPAEEKKAAAAEKAPAEKKPKAGKKLPKEAGAAA-GDKKKKRHKKSVE 60
           MAPKAEKKPAEKKPAEEKKAAAAEKAPAEKKPKAGKKLPKEAGAAA G+KKKKR KKSVE
Sbjct: 1   MAPKAEKKPAEKKPAEEKKAAAAEKAPAEKKPKAGKKLPKEAGAAAAGEKKKKRTKKSVE 60

Query: 61  TYKIYIFKVLKQVHPDIGISSKAMSIMNSFINDIFEKLAQESARLARYNKKPTITSREIQ 120
           TYKIYIFKVLKQVHPDIGISSKAMSIMNSFINDIFEKLAQESARLARYNKKPTITSREIQ
Sbjct: 61  TYKIYIFKVLKQVHPDIGISSKAMSIMNSFINDIFEKLAQESARLARYNKKPTITSREIQ 120

Query: 121 TAVRLVLPGELAKHAVSEGTKAFWLF 146
           TAVRLVLPGELAKHAVSEGTKA   F
Sbjct: 121 TAVRLVLPGELAKHAVSEGTKAVTKF 146
[Close]
BLAST of Spo00070.1 vs. UniProtKB/TrEMBL
Match: A0A0K9QTH0_SPIOL (Histone H2B OS=Spinacia oleracea GN=SOVF_143230 PE=3 SV=1)

HSP 1 Score: 251.1 bits (640), Expect = 1.100e-63
Identity = 142/145 (97.93%), Postives = 142/145 (97.93%), Query Frame = 1 

		  

Query: 1   MAPKAEKKPAEKKPAEEKKAAAAEKAPAEKKPKAGKKLPKEAGAAAGDKKKKRHKKSVET 60
           MAPKAEKKPAEKKPAEEKKAAAAEKAPAEKKPKAGKKLPKEAGAAAGDKKKKRHKKSVET
Sbjct: 1   MAPKAEKKPAEKKPAEEKKAAAAEKAPAEKKPKAGKKLPKEAGAAAGDKKKKRHKKSVET 60

Query: 61  YKIYIFKVLKQVHPDIGISSKAMSIMNSFINDIFEKLAQESARLARYNKKPTITSREIQT 120
           YKIYIFKVLKQVHPDIGISSKAMSIMNSFINDIFEKLAQESARLARYNKKPTITSREIQT
Sbjct: 61  YKIYIFKVLKQVHPDIGISSKAMSIMNSFINDIFEKLAQESARLARYNKKPTITSREIQT 120

Query: 121 AVRLVLPGELAKHAVSEGTKAFWLF 146
           AVRLVLPGELAKHAVSEGTKA   F
Sbjct: 121 AVRLVLPGELAKHAVSEGTKAVTKF 145
[Close]
BLAST of Spo00070.1 vs. UniProtKB/TrEMBL
Match: A0A0K9QV24_SPIOL (Histone H2B OS=Spinacia oleracea GN=SOVF_037580 PE=3 SV=1)

HSP 1 Score: 249.6 bits (636), Expect = 3.300e-63
Identity = 141/145 (97.24%), Postives = 141/145 (97.24%), Query Frame = 1 

		  

Query: 1   MAPKAEKKPAEKKPAEEKKAAAAEKAPAEKKPKAGKKLPKEAGAAAGDKKKKRHKKSVET 60
           MAPKAEKKPAEKKP EEKKAAAAEKAPAEKKPKAGKKLPKEAGAAAGDKKKKRHKKSVET
Sbjct: 1   MAPKAEKKPAEKKPVEEKKAAAAEKAPAEKKPKAGKKLPKEAGAAAGDKKKKRHKKSVET 60

Query: 61  YKIYIFKVLKQVHPDIGISSKAMSIMNSFINDIFEKLAQESARLARYNKKPTITSREIQT 120
           YKIYIFKVLKQVHPDIGISSKAMSIMNSFINDIFEKLAQESARLARYNKKPTITSREIQT
Sbjct: 61  YKIYIFKVLKQVHPDIGISSKAMSIMNSFINDIFEKLAQESARLARYNKKPTITSREIQT 120

Query: 121 AVRLVLPGELAKHAVSEGTKAFWLF 146
           AVRLVLPGELAKHAVSEGTKA   F
Sbjct: 121 AVRLVLPGELAKHAVSEGTKAVTKF 145
[Close]
BLAST of Spo00070.1 vs. UniProtKB/TrEMBL
Match: A0A0K9RTN1_SPIOL (Histone H2B OS=Spinacia oleracea GN=SOVF_029910 PE=3 SV=1)

HSP 1 Score: 247.7 bits (631), Expect = 1.200e-62
Identity = 140/145 (96.55%), Postives = 140/145 (96.55%), Query Frame = 1 

		  

Query: 1   MAPKAEKKPAEKKPAEEKKAAAAEKAPAEKKPKAGKKLPKEAGAAAGDKKKKRHKKSVET 60
           M PK EKKPAEKKPAEEKKAAAAEKAPAEKKPKAGKKLPKEAGAAAGDKKKKRHKKSVET
Sbjct: 1   MPPKGEKKPAEKKPAEEKKAAAAEKAPAEKKPKAGKKLPKEAGAAAGDKKKKRHKKSVET 60

Query: 61  YKIYIFKVLKQVHPDIGISSKAMSIMNSFINDIFEKLAQESARLARYNKKPTITSREIQT 120
           YKIYIFKVLKQVHPDIGISSKAMSIMNSFINDIFEKLAQESARLARYNKKPTITSREIQT
Sbjct: 61  YKIYIFKVLKQVHPDIGISSKAMSIMNSFINDIFEKLAQESARLARYNKKPTITSREIQT 120

Query: 121 AVRLVLPGELAKHAVSEGTKAFWLF 146
           AVRLVLPGELAKHAVSEGTKA   F
Sbjct: 121 AVRLVLPGELAKHAVSEGTKAVTKF 145
[Close]
BLAST of Spo00070.1 vs. UniProtKB/TrEMBL
Match: A0A0J8BUQ7_BETVU (Histone H2B OS=Beta vulgaris subsp. vulgaris GN=BVRB_7g174410 PE=3 SV=1)

HSP 1 Score: 241.1 bits (614), Expect = 1.200e-60
Identity = 140/146 (95.89%), Postives = 141/146 (96.58%), Query Frame = 1 

		  

Query: 1   MAPKAEKKPAEKKPAEEKKAAAAEKAPAEKKPKAGKKLPKEAGAAA-GDKKKKRHKKSVE 60
           MAPKAEKKPAEKKPAEEKKAAAAEKAPAEKKPKAGKKLPKEAGAAA G+KKKKR KKSVE
Sbjct: 1   MAPKAEKKPAEKKPAEEKKAAAAEKAPAEKKPKAGKKLPKEAGAAAAGEKKKKRTKKSVE 60

Query: 61  TYKIYIFKVLKQVHPDIGISSKAMSIMNSFINDIFEKLAQESARLARYNKKPTITSREIQ 120
           TYKIYIFKVLKQVHPDIGISSKAMSIMNSFINDIFEKLAQESARLARYNKKPTITSREIQ
Sbjct: 61  TYKIYIFKVLKQVHPDIGISSKAMSIMNSFINDIFEKLAQESARLARYNKKPTITSREIQ 120

Query: 121 TAVRLVLPGELAKHAVSEGTKAFWLF 146
           TAVRLVLPGELAKHAVSEGTKA   F
Sbjct: 121 TAVRLVLPGELAKHAVSEGTKAVTKF 146
[Close]
BLAST of Spo00070.1 vs. UniProtKB/TrEMBL
Match: M5WKF6_PRUPE (Histone H2B OS=Prunus persica GN=PRUPE_ppa012932mg PE=3 SV=1)

HSP 1 Score: 240.7 bits (613), Expect = 1.500e-60
Identity = 136/145 (93.79%), Postives = 138/145 (95.17%), Query Frame = 1 

		  

Query: 1   MAPKAEKKPAEKKPAEEKKAAAAEKAPAEKKPKAGKKLPKEAGAAAGDKKKKRHKKSVET 60
           MAPKAEKKPAEKKPAEEKK+  AEKAPAEKKPKAGKKLPKEAGAAAGDKKKKR KKSVET
Sbjct: 1   MAPKAEKKPAEKKPAEEKKSTVAEKAPAEKKPKAGKKLPKEAGAAAGDKKKKRSKKSVET 60

Query: 61  YKIYIFKVLKQVHPDIGISSKAMSIMNSFINDIFEKLAQESARLARYNKKPTITSREIQT 120
           YKIYIFKVLKQVHPDIGISSKAM IMNSFINDIFEKLAQES+RLARYNKKPTITSREIQT
Sbjct: 61  YKIYIFKVLKQVHPDIGISSKAMGIMNSFINDIFEKLAQESSRLARYNKKPTITSREIQT 120

Query: 121 AVRLVLPGELAKHAVSEGTKAFWLF 146
           AVRLVLPGELAKHAVSEGTKA   F
Sbjct: 121 AVRLVLPGELAKHAVSEGTKAVTKF 145
[Close]
BLAST of Spo00070.1 vs. ExPASy Swiss-Prot
Match: H2B1_MEDTR (Probable histone H2B.1 OS=Medicago truncatula PE=3 SV=3)

HSP 1 Score: 235.0 bits (598), Expect = 7.500e-61
Identity = 132/145 (91.03%), Postives = 136/145 (93.79%), Query Frame = 1 

		  

Query: 1   MAPKAEKKPAEKKPAEEKKAAAAEKAPAEKKPKAGKKLPKEAGAAAGDKKKKRHKKSVET 60
           MAPK EKKPAEKKPAEEKK+  AEKAPAEKKPKAGKKLPKE G+AAG+KKKKR KKSVET
Sbjct: 1   MAPKGEKKPAEKKPAEEKKSTVAEKAPAEKKPKAGKKLPKEGGSAAGEKKKKRSKKSVET 60

Query: 61  YKIYIFKVLKQVHPDIGISSKAMSIMNSFINDIFEKLAQESARLARYNKKPTITSREIQT 120
           YKIYIFKVLKQVHPDIGISSKAM IMNSFINDIFEKLAQES+RLARYNKKPTITSREIQT
Sbjct: 61  YKIYIFKVLKQVHPDIGISSKAMGIMNSFINDIFEKLAQESSRLARYNKKPTITSREIQT 120

Query: 121 AVRLVLPGELAKHAVSEGTKAFWLF 146
           AVRLVLPGELAKHAVSEGTKA   F
Sbjct: 121 AVRLVLPGELAKHAVSEGTKAVTKF 145
[Close]
BLAST of Spo00070.1 vs. ExPASy Swiss-Prot
Match: H2B_GOSHI (Histone H2B OS=Gossypium hirsutum GN=HIS2B PE=2 SV=3)

HSP 1 Score: 234.2 bits (596), Expect = 1.300e-60
Identity = 135/145 (93.10%), Postives = 137/145 (94.48%), Query Frame = 1 

		  

Query: 1   MAPKAEKKPAEKKPAEEKKAAAAEKAPAEKKPKAGKKLPKEAGAAAGDKKKKRHKKSVET 60
           MAPKAEKKPAEKKPAEEKKA  AEKAPAEKKPKAGKKLPKE GAAAGDKKKKR KKSVET
Sbjct: 1   MAPKAEKKPAEKKPAEEKKAV-AEKAPAEKKPKAGKKLPKEGGAAAGDKKKKRVKKSVET 60

Query: 61  YKIYIFKVLKQVHPDIGISSKAMSIMNSFINDIFEKLAQESARLARYNKKPTITSREIQT 120
           YKIYIFKVLKQVHPDIGISSKAM IMNSFINDIFEKLAQE++RLARYNKKPTITSREIQT
Sbjct: 61  YKIYIFKVLKQVHPDIGISSKAMGIMNSFINDIFEKLAQEASRLARYNKKPTITSREIQT 120

Query: 121 AVRLVLPGELAKHAVSEGTKAFWLF 146
           AVRLVLPGELAKHAVSEGTKA   F
Sbjct: 121 AVRLVLPGELAKHAVSEGTKAVTKF 144
[Close]
BLAST of Spo00070.1 vs. ExPASy Swiss-Prot
Match: H2B2_MEDTR (Probable histone H2B.2 OS=Medicago truncatula PE=3 SV=3)

HSP 1 Score: 231.1 bits (588), Expect = 1.100e-59
Identity = 130/145 (89.66%), Postives = 134/145 (92.41%), Query Frame = 1 

		  

Query: 1   MAPKAEKKPAEKKPAEEKKAAAAEKAPAEKKPKAGKKLPKEAGAAAGDKKKKRHKKSVET 60
           MAPK EKKPAEKKPAEEKK+  AEKAPAEKKPKAGKKLPKE G+AAG+KKKKR KKSVET
Sbjct: 1   MAPKGEKKPAEKKPAEEKKSTVAEKAPAEKKPKAGKKLPKEGGSAAGEKKKKRSKKSVET 60

Query: 61  YKIYIFKVLKQVHPDIGISSKAMSIMNSFINDIFEKLAQESARLARYNKKPTITSREIQT 120
           YKIYIFKVLKQVHPDIGISSKAM IMNSFINDIFEKL QES+RLARYNKKPTITSREIQT
Sbjct: 61  YKIYIFKVLKQVHPDIGISSKAMGIMNSFINDIFEKLTQESSRLARYNKKPTITSREIQT 120

Query: 121 AVRLVLPGELAKHAVSEGTKAFWLF 146
           AVRLVLPGELAKH VSEGTKA   F
Sbjct: 121 AVRLVLPGELAKHDVSEGTKAVTKF 145
[Close]
BLAST of Spo00070.1 vs. ExPASy Swiss-Prot
Match: H2B7_ARATH (Histone H2B.7 OS=Arabidopsis thaliana GN=At3g46030 PE=1 SV=3)

HSP 1 Score: 219.9 bits (559), Expect = 2.500e-56
Identity = 129/145 (88.97%), Postives = 132/145 (91.03%), Query Frame = 1 

		  

Query: 1   MAPKAEKKPAEKKPAEEKKAAAAEKAPAEKKPKAGKKLPKEAGAAAGDKKKKRHKKSVET 60
           MAPKAEKKPAEKKP EEK  + AEKAPAEKKPKAGKKLPKEAGA  GDKKKK  KKSVET
Sbjct: 1   MAPKAEKKPAEKKPVEEK--SKAEKAPAEKKPKAGKKLPKEAGAG-GDKKKKMKKKSVET 60

Query: 61  YKIYIFKVLKQVHPDIGISSKAMSIMNSFINDIFEKLAQESARLARYNKKPTITSREIQT 120
           YKIYIFKVLKQVHPDIGISSKAM IMNSFINDIFEKLA ES++LARYNKKPTITSREIQT
Sbjct: 61  YKIYIFKVLKQVHPDIGISSKAMGIMNSFINDIFEKLASESSKLARYNKKPTITSREIQT 120

Query: 121 AVRLVLPGELAKHAVSEGTKAFWLF 146
           AVRLVLPGELAKHAVSEGTKA   F
Sbjct: 121 AVRLVLPGELAKHAVSEGTKAVTKF 142
[Close]
BLAST of Spo00070.1 vs. ExPASy Swiss-Prot
Match: H2B11_ARATH (Histone H2B.11 OS=Arabidopsis thaliana GN=At5g59910 PE=1 SV=5)

HSP 1 Score: 219.2 bits (557), Expect = 4.300e-56
Identity = 129/148 (87.16%), Postives = 134/148 (90.54%), Query Frame = 1 

		  

Query: 1   MAPKAEKKPAEKKPAEEK---KAAAAEKAPAEKKPKAGKKLPKEAGAAAGDKKKKRHKKS 60
           MAPKAEKKPAEKKPA EK   + + AEKAPAEKKPKAGKKLPKEAGA  GDKKKK  KKS
Sbjct: 1   MAPKAEKKPAEKKPASEKPVEEKSKAEKAPAEKKPKAGKKLPKEAGAG-GDKKKKMKKKS 60

Query: 61  VETYKIYIFKVLKQVHPDIGISSKAMSIMNSFINDIFEKLAQESARLARYNKKPTITSRE 120
           VETYKIYIFKVLKQVHPDIGISSKAM IMNSFINDIFEKLAQE+++LARYNKKPTITSRE
Sbjct: 61  VETYKIYIFKVLKQVHPDIGISSKAMGIMNSFINDIFEKLAQEASKLARYNKKPTITSRE 120

Query: 121 IQTAVRLVLPGELAKHAVSEGTKAFWLF 146
           IQTAVRLVLPGELAKHAVSEGTKA   F
Sbjct: 121 IQTAVRLVLPGELAKHAVSEGTKAVTKF 147
[Close]
BLAST of Spo00070.1 vs. TAIR (Arabidopsis)
Match: AT3G46030.1 (Histone superfamily protein)

HSP 1 Score: 219.9 bits (559), Expect = 1.400e-57
Identity = 129/145 (88.97%), Postives = 132/145 (91.03%), Query Frame = 1 

		  

Query: 1   MAPKAEKKPAEKKPAEEKKAAAAEKAPAEKKPKAGKKLPKEAGAAAGDKKKKRHKKSVET 60
           MAPKAEKKPAEKKP EEK  + AEKAPAEKKPKAGKKLPKEAGA  GDKKKK  KKSVET
Sbjct: 1   MAPKAEKKPAEKKPVEEK--SKAEKAPAEKKPKAGKKLPKEAGAG-GDKKKKMKKKSVET 60

Query: 61  YKIYIFKVLKQVHPDIGISSKAMSIMNSFINDIFEKLAQESARLARYNKKPTITSREIQT 120
           YKIYIFKVLKQVHPDIGISSKAM IMNSFINDIFEKLA ES++LARYNKKPTITSREIQT
Sbjct: 61  YKIYIFKVLKQVHPDIGISSKAMGIMNSFINDIFEKLASESSKLARYNKKPTITSREIQT 120

Query: 121 AVRLVLPGELAKHAVSEGTKAFWLF 146
           AVRLVLPGELAKHAVSEGTKA   F
Sbjct: 121 AVRLVLPGELAKHAVSEGTKAVTKF 142
[Close]
BLAST of Spo00070.1 vs. TAIR (Arabidopsis)
Match: AT5G59910.1 (Histone superfamily protein)

HSP 1 Score: 219.2 bits (557), Expect = 2.400e-57
Identity = 129/148 (87.16%), Postives = 134/148 (90.54%), Query Frame = 1 

		  

Query: 1   MAPKAEKKPAEKKPAEEK---KAAAAEKAPAEKKPKAGKKLPKEAGAAAGDKKKKRHKKS 60
           MAPKAEKKPAEKKPA EK   + + AEKAPAEKKPKAGKKLPKEAGA  GDKKKK  KKS
Sbjct: 1   MAPKAEKKPAEKKPASEKPVEEKSKAEKAPAEKKPKAGKKLPKEAGAG-GDKKKKMKKKS 60

Query: 61  VETYKIYIFKVLKQVHPDIGISSKAMSIMNSFINDIFEKLAQESARLARYNKKPTITSRE 120
           VETYKIYIFKVLKQVHPDIGISSKAM IMNSFINDIFEKLAQE+++LARYNKKPTITSRE
Sbjct: 61  VETYKIYIFKVLKQVHPDIGISSKAMGIMNSFINDIFEKLAQEASKLARYNKKPTITSRE 120

Query: 121 IQTAVRLVLPGELAKHAVSEGTKAFWLF 146
           IQTAVRLVLPGELAKHAVSEGTKA   F
Sbjct: 121 IQTAVRLVLPGELAKHAVSEGTKAVTKF 147
[Close]
BLAST of Spo00070.1 vs. TAIR (Arabidopsis)
Match: AT3G45980.1 (Histone superfamily protein)

HSP 1 Score: 216.9 bits (551), Expect = 1.200e-56
Identity = 128/148 (86.49%), Postives = 133/148 (89.86%), Query Frame = 1 

		  

Query: 1   MAPKAEKKPAEKKPAEEK---KAAAAEKAPAEKKPKAGKKLPKEAGAAAGDKKKKRHKKS 60
           MAP+AEKKPAEKKPA EK   + + AEKAPAEKKPKAGKKLPKEAGA  GDKKKK  KKS
Sbjct: 1   MAPRAEKKPAEKKPAAEKPVEEKSKAEKAPAEKKPKAGKKLPKEAGAG-GDKKKKMKKKS 60

Query: 61  VETYKIYIFKVLKQVHPDIGISSKAMSIMNSFINDIFEKLAQESARLARYNKKPTITSRE 120
           VETYKIYIFKVLKQVHPDIGISSKAM IMNSFINDIFEKLA ES++LARYNKKPTITSRE
Sbjct: 61  VETYKIYIFKVLKQVHPDIGISSKAMGIMNSFINDIFEKLASESSKLARYNKKPTITSRE 120

Query: 121 IQTAVRLVLPGELAKHAVSEGTKAFWLF 146
           IQTAVRLVLPGELAKHAVSEGTKA   F
Sbjct: 121 IQTAVRLVLPGELAKHAVSEGTKAVTKF 147
[Close]
BLAST of Spo00070.1 vs. TAIR (Arabidopsis)
Match: AT2G28720.1 (Histone superfamily protein)

HSP 1 Score: 209.5 bits (532), Expect = 1.900e-54
Identity = 124/148 (83.78%), Postives = 129/148 (87.16%), Query Frame = 1 

		  

Query: 1   MAPKAEKKPAEKKPAEEKKAA---AAEKAPAEKKPKAGKKLPKEAGAAAGDKKKKRHKKS 60
           MAPKA KKPAEKKPAE+  A     AEKAPAEKKPKAGKKLPKEA     +KKKKR KKS
Sbjct: 1   MAPKAGKKPAEKKPAEKAPAEEEKVAEKAPAEKKPKAGKKLPKEAVTGGVEKKKKRVKKS 60

Query: 61  VETYKIYIFKVLKQVHPDIGISSKAMSIMNSFINDIFEKLAQESARLARYNKKPTITSRE 120
            ETYKIYIFKVLKQVHPDIGISSKAM IMNSFINDIFEKLAQE+++LARYNKKPTITSRE
Sbjct: 61  TETYKIYIFKVLKQVHPDIGISSKAMGIMNSFINDIFEKLAQEASKLARYNKKPTITSRE 120

Query: 121 IQTAVRLVLPGELAKHAVSEGTKAFWLF 146
           IQTAVRLVLPGELAKHAVSEGTKA   F
Sbjct: 121 IQTAVRLVLPGELAKHAVSEGTKAVTKF 148
[Close]
BLAST of Spo00070.1 vs. TAIR (Arabidopsis)
Match: AT1G07790.1 (Histone superfamily protein)

HSP 1 Score: 207.6 bits (527), Expect = 7.200e-54
Identity = 124/148 (83.78%), Postives = 131/148 (88.51%), Query Frame = 1 

		  

Query: 1   MAPKAEKKPAEKKPAEEK---KAAAAEKAPAEKKPKAGKKLPKEAGAAAGDKKKKRHKKS 60
           MAP+AEKKPAEKK A E+   +  AAEKAPAEKKPKAGKKLP +    AGDKKKKR KK+
Sbjct: 1   MAPRAEKKPAEKKTAAERPVEENKAAEKAPAEKKPKAGKKLPPK---EAGDKKKKRSKKN 60

Query: 61  VETYKIYIFKVLKQVHPDIGISSKAMSIMNSFINDIFEKLAQESARLARYNKKPTITSRE 120
           VETYKIYIFKVLKQVHPDIGISSKAM IMNSFINDIFEKLAQES++LARYNKKPTITSRE
Sbjct: 61  VETYKIYIFKVLKQVHPDIGISSKAMGIMNSFINDIFEKLAQESSKLARYNKKPTITSRE 120

Query: 121 IQTAVRLVLPGELAKHAVSEGTKAFWLF 146
           IQTAVRLVLPGELAKHAVSEGTKA   F
Sbjct: 121 IQTAVRLVLPGELAKHAVSEGTKAVTKF 145
The following BLAST results are available for this feature:
BLAST of Spo00070.1 vs. NCBI nr
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. NCBI nr)
Total hits: 5
Match NameE-valueIdentityDescription
gi|902185838|gb|KNA10559.1|1.6e-6397.9hypothetical protein SOVF_1432... [more]
gi|902184879|gb|KNA10386.1|4.7e-6397.2hypothetical protein SOVF_1448... [more]
gi|902233045|gb|KNA22906.1|1.8e-6296.5hypothetical protein SOVF_0299... [more]
gi|657986068|ref|XP_008385152.1|7.5e-6194.4PREDICTED: probable histone H2... [more]
gi|731349098|ref|XP_010685822.1|1.7e-6095.8PREDICTED: histone H2B isoform... [more]
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BLAST of Spo00070.1 vs. UniProtKB/TrEMBL
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. UniprotKB/TrEMBL)
Total hits: 5
Match NameE-valueIdentityDescription
A0A0K9QTH0_SPIOL1.1e-6397.9Histone H2B OS=Spinacia olerac... [more]
A0A0K9QV24_SPIOL3.3e-6397.2Histone H2B OS=Spinacia olerac... [more]
A0A0K9RTN1_SPIOL1.2e-6296.5Histone H2B OS=Spinacia olerac... [more]
A0A0J8BUQ7_BETVU1.2e-6095.8Histone H2B OS=Beta vulgaris s... [more]
M5WKF6_PRUPE1.5e-6093.7Histone H2B OS=Prunus persica ... [more]
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BLAST of Spo00070.1 vs. ExPASy Swiss-Prot
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. ExPASy SwissProt)
Total hits: 5
Match NameE-valueIdentityDescription
H2B1_MEDTR7.5e-6191.0Probable histone H2B.1 OS=Medi... [more]
H2B_GOSHI1.3e-6093.1Histone H2B OS=Gossypium hirsu... [more]
H2B2_MEDTR1.1e-5989.6Probable histone H2B.2 OS=Medi... [more]
H2B7_ARATH2.5e-5688.9Histone H2B.7 OS=Arabidopsis t... [more]
H2B11_ARATH4.3e-5687.1Histone H2B.11 OS=Arabidopsis ... [more]
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BLAST of Spo00070.1 vs. TAIR (Arabidopsis)
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. TAIR)
Total hits: 5
Match NameE-valueIdentityDescription
AT3G46030.11.4e-5788.9Histone superfamily protein[more]
AT5G59910.12.4e-5787.1Histone superfamily protein[more]
AT3G45980.11.2e-5686.4Histone superfamily protein[more]
AT2G28720.11.9e-5483.7Histone superfamily protein[more]
AT1G07790.17.2e-5483.7Histone superfamily protein[more]
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InterPro
Analysis Name: InterPro Annotations of S. oleracea
Date Performed: 2018-06-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR000558Histone H2BPRINTSPR00621HISTONEH2Bcoord: 119..132
score: 1.4E-45coord: 80..100
score: 1.4E-45coord: 132..145
score: 1.4E-45coord: 61..79
score: 1.4E-45coord: 102..119
score: 1.4
IPR000558Histone H2BPANTHERPTHR23428HISTONE H2Bcoord: 19..141
score: 5.5E
IPR000558Histone H2BSMARTSM00427h2b3coord: 51..147
score: 3.5
IPR000558Histone H2BPROSITEPS00357HISTONE_H2Bcoord: 116..138
scor
IPR007125Histone H2A/H2B/H3PFAMPF00125Histonecoord: 4..124
score: 1.2
IPR009072Histone-foldGENE3D1.10.20.10coord: 27..143
score: 9.8
IPR009072Histone-foldunknownSSF47113Histone-foldcoord: 32..145
score: 1.45
NoneNo IPR availableunknownCoilCoilcoord: 90..110
scor

GO Annotation
GO Assignments
This mRNA is annotated with the following GO terms.
Category Term Accession Term Name
cellular_component GO:0000786 nucleosome
cellular_component GO:0005634 nucleus
molecular_function GO:0003677 DNA binding
molecular_function GO:0046982 protein heterodimerization activity