Spo23459.1 (mRNA) | SpinachBase

Overview


Name	Spo23459.1
Type	mRNA
Organism	Spinacia oleracea (Spinach)
Description	tRNA pseudouridine synthase (5.4.99.-)
Location	Super_scaffold_88 : 64050 .. 72571 (-)
Sequence length	2833

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

AAAAAAAAAAAAACCTCTCTAAGCCCACAGCCCCAACACGAGGCACGGCCTACTGCCCTCGGTCATCCGGAGCCTTGTAGGCGTTGTAGCCACTTTGTAGCCAAGCCTTGGTTTGGATATACTTGCGGTGTACTTCATTTGCAGTGCCTGGTCTATCAGTGTATCACTAGAACTGCAAAAATGGCGGCATGGTCTCTGCGTCTGCCATTGACAACTCCGTGGAGAACTGGTAATAATTATGGCAGACTCAAACCCTTTTCATATCCATGGAATATTTCTATCTATAAGCATAAAACCCAATTGAATATAAAGCTACTTGCCCATTACTCCACTACTTCATCATCACCTTCAATTTCTGATTCTACTCAAACTCATGAACCCCAAATTCAACCCCAGATTCATGAATCAGTCGCTTCTCCTTCGAAATGGGAATCTTTCCGAAAGAAGAAAGTTGTCATGCGCGTTGGTTATGTTGGTTCCAACTACAAAGGTCATCTCACCCTTCTCTCTCATATTCCCTTTCAAATGTTCGTAATTAATCGGTATAATTTATAAACAAAAATTCAAATTTGTCTTTGTTTTGTGTTTTATTAGGCTTGCAGAAACAACAAGAGGATAACATTCCCAGTAAGTTTATTTCCTTTATCTTAATTTTGTTTTTGTTCTGCATATTCTTGTTCATTGTGTTTTGATTGAATGTTGATCGAATTTCTATAGAATTTATCAGTCTTAATGCATTTGATTCAAGGGATTGAGATTTAAAACCATAACAATGTGATCCAGAGAAGTGTTTAACTGTTTATAGAGTTGTTTGTTACCTGTTGTTAGTTTGTTACTAGTTGCAAAATTGCTGGGATGTTGGATTTTGGGTGTCATTTCGACCCCTCAGTCACTACGAGTCTACAACCGCCCCGCGATCAGTGGAATGTGTATCTTTGTTAATTACAGATTTACAGTACAACTGCTGGAGACGTTGAACTGTCAATTTTAGCTTCCTAAACTGCTGCACTTTCTTAATTGTAGCCATTGAAGAAGCTTTGGAGAATGCCCTTTACCAAGCCGGTGCCATCAACGACACCAATTTTGGTAACTTGAACAAAATTGCCTGGGCAAGAAGTAGCCGAACCGATAAAGGAGTAAGCTTGAAACATTTCACCTTCAGTCACTCCTCCTTTCTAAACAATGCAATGGGTTAAAAATTGTGGAGTTGTTTTTGTTGGTTGTTTTCTAGGTTCATTCACTTGCCACGATGATATCTTTGAAAATGGAAATTCCTGATTATGCGTGGATGAATGACCCTAATGGTCTCGTTCTTGCAGACCACGTTAACCAGCATCTCCCTAATGATATAAGAGTGTTTAGTATTTTACCTTCTCAAAGGTAATGTGCTCACTCTTCTTGCATTTAGCAGCAAATCTTTGACTCAATCACTCTATATCCTTTTACACAAATTTTCTCATGTGTATAAATTCTGTGCATCTCATTTAACAATTTGATTCTCACCTTCAATGCAATCAAGACTGCAATGAATAAGTGCAAATTCCTAATTGAACACTATCTACGGGGCATCAGCAATTCAATAGATTTTTCTCCTTATCGTTTCGAATATGTAGTCATTCTTGAAGCTTATTCCTCTGTAGACTTGTAGTGTATATGGAGGGAGGTGGGAGTGATGGGAAAGTTATGAATCCATTTCCCCTTTGTTTGGATATTTGAATGGGAAAGGGAATATGAAGGAACTATTTTCCTTCGCCTTTCAATGAACCATTTGGAAGAAAAATGAAAGGGTACTAGGTACTCCTTCCCACCCTTCCTCTTCCCTCTCCTTCTCAATTCCCCTTCTATCCCATGATTTTGGAAAACTTTGCAGTGGATGCATTGATGCTTGATTTCCAATGAAGTAAAGTATATGCCTATTCATGAACTTTCCCCCCCCTATGTTTGTGTACATATTAAAGTGTGTTAGGAAACTGCATATGCATATCAAACTAAACAACATAAACATCTGTCTCAATACTTCCTAATCTCATTTCGTTAGGAGTTTTGATCCTCGACGGGAATGTCATGTCCGGAATTATGCATACCTTCTTCCGGCTGAAGTTATTGGAATAACAAGTCACTCCTCCACTGCTGAAATTGATTATCATATAAAAGACTTCAATGAGATTCTAAATAATTTCGAGGTATCTCTCTTTGTATCATTTCTACTTATCATCTGCGACAGTCAGTTTCTTCATTTGATTTTTTTGGCTCATACTGGATCCAGACAAGGTTAAATAATGAATAAACCACATCTACACTGTAATGAGTTATCATGTAAAATAAGACAGGGAATCGGGGATGTTCTTCCATGTTATATGATTTTCTTTTTGTTTATAGTGGTTCTGTTAACTCTGTAATAGTTGAAAACATGAAATTCTTCATTATAGAATATCTATAATGGACAAATTTAAAGTCATGTATACTTGCTTATTTTCATTATGCATGCTACTCTCTGTTTGTTAGAAACGGCTTCATTTTTAACGGGACTATAAATGCTTTTGGTTGCTTACAGTAAAATTACTGGTTTTCTTGGCTGATATACACAAGTTTCGTTACTTAACTGTTTCTAGATGCCTTTTGCAGGGAGAATATCCTTATCATAATTATACAGCCAGATCAAAATATCGAAGAAGGCCGCTAAAAGGACGTGCAAATAGAAGACACAAAAAATCTAATAAGCTGCCACTTGCAGAGGTAGAGGAAAATAATGACGATTTTCAGTCCTCGGTTGATGATGCAGATGCATTATGTGATGAAGAACTGATCACTGATTTGCCAGACGACAGTGATCTTGATGAGGTGTTTGATTCTGAAGATAGCCATGGTGATGAGTCAGAAAAGAAAAATTCTTCTGTTATTAAAGCTAGATGGCTTCACGAGCGTGATGATGCGGACAAGCTCAGTGCTGCTCACTGGAGAAAGATATTTCAGTGTTCTTGTGGCAAGTTGGATCAGTCACTTGAAATGGGTTTTGTGGAGCTCTCGATATGTGGAGAGTCTTTCATGTTGCATCAAGTAAGCCTCCGTTAATTGCCTTTATTTCTGTTAAGCAGAGGTTTTTTTGGGTAAGTTAACCAGATGTTTTCATTATCCTACATTCCTACGTATATCTTTTATTTGTAGTCTGTAGTCTGTACCAGGTTGCAAATATAAGATATTATATTGTTAGAAACTTGGAAATATATTGTAGGTTATAGAGTTCATTGATCTTTTGGTCTAGGTGACAAAGTGTGATTTATCCCCATTAGTCAACATCTTATAAGCAATGGATGGTAGGATGTATAAATCGGATTTGTTTTCAGAACATATTTCAGCTGTTGAGATTTGAGATAAGGTAGGATGATGCGGTGAGCTGGTGAGTAGGTAGATTGCTGCTGGATTTCTTGTGTATCTTAGGTATAATATAAGTGGTTATGGTTACAAGTATAGAATTAAATATGAAGAGGAGTTGCTGATATTGAGTGGACCAACTGCAATGGTCTGGGATGGCGGCGGTGGTGGTGTTATGATGGGAACTACATGTGAAGCCATCTTAACAACCATAACTCACTGCTCTTTCTTCAAGTCCGCTAAAATTGCCGGAATTTCTCCTAATAACTTCCGTACTATCAAGACTACAAAGACTCATGCTTTTTCACTAAGGGGAGATTCACTAAGAGCCACCATTGAAGCCGATGTCAACGCCGGCTTTATTCCTCTTTTCCTTGTCGCCACCGTGGGGGCCACTTCCACTGCGGCCGTAGACGAGGTGGGCCCGCTTTGCGATGTTGCAAAGGAATACAATATGTGGGTTCATGTAGATGCAGCCTATGCTGGAAACGCTTGTAGTCTGGGATGTAGGGAACAGAAGATGCACCAGTAAGGAATATGGAGGTTGGGATCATGGGGATCTTAGAAGAAGCCGAGGGAGACCGAAGATGACTTGGATGGAAGGAGTTAAGAATGAAACGAAGAAGTTTTCTTTTTGCAGGAATGTAGAAAGGAATGGAGGAACAGGATCATGGACCTCATGGTTGACGAGCATAGGAGATAAAACCTTGGTTCATGTTGCCGACACCATCACTGGGATTAAGGCTTCGATATTGTTGTCGTTATTATGGTTATGGATCGACTTGATTGTTGGGGGCTTATTCTACTTCATTGAGATTGCAGGTTCAAGGAAAGGCACAACATCATGCAAGTTTGTCCGCAACTTTAACTCATTGATTGGTTTTGACTTGGTGGGTGGTTGGCCTATGTCCAGTTTTAGCAATACAGTATAGTTTTCTAGCACATTCCTTTTGGATCGTAATTTAGGTGTCAATAGATACTTGCTCCATGTGATTTAGCTGTTATACATTTACATGTAATTCCACTATGCCACTTCTAAGAGAAATCTCATACGTGTTTGAAATGTAGGACCAACGTGATGCATTTAAATAGACAATTTTGTGTACTCTGTTTGTTGTCTATTTTTCCTTGGATAAGTTCTACTCATGAGTAGTTTAAACAGACTTGAGATTTGGCAATATACTAGCACTTCCGCTTTATTTCTCAACCTTTTTCTCTCTTTTATACCGGATATTTTACTGGTTGGAGGGAGGATATATATGTTTCTTCCAGCTTCTTTGATAATTCTGTCTAACATACTTTCTCTGTAAGTGGCGTCATTGGTATAAATTCTTGGCTGGGTTGCTTTGTTATTTTTCCAAATTTGATTTCATTTTAAGTTATTTCAATCACTATAACCCCTAAGCTCGTAATTGTTGTAAATTGGACAGATCCGCAAAATGGTTGGCACCGCTATAGCTGTTAAACGTGGATTGTTTCCCAGAGATATTCTAATGTTGTCACTCAACAAATTCTCGAGAATTGTCCTACCTATTGCTCCATCAGAAGGTTTATTTTTAAGAGGAAATGACTTTAGATTGAGGAAACTTCCTGGAAATAAAAAAAGGCCAGAGATGCAGACCTTAGCTGATTCTGAAGAAATTAAAAAGGAAGTAGATAAGTTCTATGTAACTGTACTGGTACCTCAGGTTTCTAAGTTTTTGGACCCTCATAAGTCTCCCTGGAAGGAATGGATTGAGATTCTGGATGCTAATGCGAGCATACTAGAATCGGAGTTGGATGAAGTCAGAAATGCCTGGAATGCGTGGAATGAAGAATTTCCAAATAGGATTATTTCTAGAAGGGTAAGGTTTTCATTTTATTTATTCAAATTCATTGCTATTTCTCAACTGTCAAATTTACAGTCTTATAAAAGTTTTAAAAGTTAATATTAGCAATGATGTATAACTGTAAGTACTTTGACAAATTAATGATCACAGTTGGTAAGATTTGATCTAAAAAGTCAATTATAGCTCATTATTTTTATATAGCTGGGGATGTTATATTGTAGTGGACATCCCTCTGAGCAATAGCAGATATTTAGCTGAGTCTGAATATTCCATGTACTCATCAGTATGACATTTTGATATATATGCTTACCTGCAGAAACCTGGAGCATTAGATGAATGATATGAGATGAATATATAACAATTCAAAATTTGACAAGTGATGGTGCTAGCCTATCTGGAGCATTGTTAAGCATAAGCATCTTCCTGCAACCTGCAGGTGAATTCACTGATTTTCGTTCTCTTTCCTAGTATGTCTGTTGCTTAGCATTAAACATTTTCTTCTGCTACTGGGTTATGCAAAATGGTACATGGCTTATAATCAATTTGTTGTAACTGAAGATTGAGCTTTTTTTTTTCCCCTCTTGTCTATATTAATTTTGATGAATTTTTTATTATCACCGTAAATATAACTTGTCAGCTCAGTGTTCTCTTGCATTCATTTAAACACCATTTCGAACATAATGGAGTCTCTACTTGGTATTGGTCTTACAGACTTATGTTGTATTTTTGGTTTCGTTGTCATCTAAATTAATTTTGCTTGTTCTCTGTGCTACCATGTAGAGTGAATTTGTTGTTTGACAGTTGCAATTGTGCATATATTATGCTTTGTTTTAGGTTCTTTGGATTAAAAATTCAAAATACCTAGGGCTCAATATACCTAATGCACTTTTTGTGATTGCCCAATCTACATTAGCATGCTCCTGAAAGGAATTATGAGAAACCCAGTCGACTTCTGTATTTGGTTTTTTGGTTGTCAACTACACAGACTAAGATCCTCAAATACATAGCAGTAAGACTGTGTTCCTTTCACGTTATTTCCACTTGTTTCAGGAAAAATAATCCCATTTAAGTTCTTATAATATAAGTTCAAGAAAAATAAGGGCTGGTCAAGTAAAATTTATAACTAAATTAAGTTTTGATAAGTTTTAATAAGTTCAGATAAGTTCAGATAAGATAAGTTCAGATAAGATAAATTCAGAAAAAATAAGTTCAGAAAAAATAAGTGAAAATTAGATGAATAGAACACACCCTAAGTTTCCTGACTGAAATTGCTAGATTTTGCGTTTCTCAAGCAGTCATGCTAATGTAAAGCCTGTATACCGAGGATAAGTAATGACCAACTTCTTGTTCATAGGGTCAGAAGATCTACTGTATCTTCACATTTTGTATTCTATAAGGCGCCTGCTATATGGCATTATACTTGGAGCATCCTACTAACCTTGATTTTCAAGGGCTTTGCTATTAAGTAATTAGATTTTTGTTAAAGGGGTCACCCTTCATTTGGTGAAAACTTGAATTATGGCCAGTTCTCTCGACTCAAATACAAACATTGTTCTAACTTCTAAGAACAACTAAACATCCTTTAGTTCGTAACTAGAGATGTCCGACCTGATCATTTCTGTTTCTACTCGTAGCAATGGCTTGAATGTTCTGTATACCTACGTGTTACTCAAAACTCTCTGCTTCCCAAAATAAATTCTTGGAGGGCTTCCATGAAGATATATCTTCTATAGCTGAAGGTACAAACTTTTAAGACAAACACTGTTGAGATCTCACAATTTATAGCAAATCTTCTTCCCTAGCTTTTGACAAGATCTAAATATAGAAGCATATATAAAACCTCCTGCAAAAGAACATTATTATCCTTTACTCTTTAAGACTCTACATCTAACATCTCCACGACTCCGGTGTTCCCTTCACCTGCATTTCACTTATTGGCTATTAACTTATCTTATCTTATTAACCTTATATTATACTATTTGAACTTATTAGCTATTATCTTATTCTATATTATTGACCATTATTGGAGTTTTGAAATGTAACTATTGTACTTATCATATATTATTTTATCGTATGGGCCCTAAACTATCAAATACGAAGTATTATCTTATTGACCCTTATTTTACCTTATCTTATACTTCCTCCGATTCTTTATTGTTGCAACATACCCCTCTACACGGTATTTAAGAAATGGGCCACAACCACTTTAGTCACATTACTTACTTAATCTTATGTGTAAAGTTGTAACTTTGGGTAAAAAATGTTAGGGAAAATTACTTTTAATAATCCAACATTTAAGCGATTTTCCAAAATTAATCCAACCTTTTGATTATTATCTATTAATCTAACCTTTATACCCCTTTAACTTTTATTGCTCCTTACAGGTTTAGCCGGTAATAATTGATGACGTGGCATGTAATTGTTAAAAAAGTTCGGATGGGTCCCATTTCTCAGGTGAATCTTTAAAAAAATCCCTTATTCCTATTTCTTTTCTTTCTCTGGTCTTTTTCACCCCTTCTTCATCATCTTCCTTCACCCCCACTTCATCATCTTCCTTCACCATTCTCTAGTGAAGACTTAGCTTTAATAATTTTTTTTTCTTTTTTTTGGAAACTCAACGTACCTCCCAACCGAAATCCACCACCTGTTTCTCTCCTCCCCCAGCAGACCCCCTTAATTATCTCCTCCCCTCAGCCAACCACCATTTTATAAAAGGCTAATTTGCATCTGAAAATTGCATGATTTGATGGTGTTGCAGATAAAAAGAAGGCTCAGTTTTTGTTTGATTAACCTTAATTTTATTTTCCCCCTTTTTATTTAAAATTGGAGTAGTTATGAAATAGAAGACCATTAGTAGAACACACATGAGCGACAATGGTGTATAGTGTTTGCTAAATAGGTGGTTTAACCTAAAGTTAGTGATCTATTTCTTGATAGAAAATTCGCAAAAATACAAGGCAATTGAAGGCAGGGATCTTTAACTTACAAAGATAAAAAAGATTGAACTTCTTTTTAATAAGAGGGGCAGTTTTAGTGAAGGGTGGTGGTTGTGTTGTTAGTGTTTTAGCGTGGAGGGTGGTAGGAGGGTTTGGTCTTATTGGTGACGAACTGATGATGATGATGGTGGGTTGGAGGAAGGAAGGCTATGGACTATGGAGTCAGAAGAACTAGATGAAGGAGGAAGAAGACGCATTAAGGGAAAGAAAAAGTGACCTTTCTAGCCGGTTTCAAGTCACTTGGGTTCAATAAAAGTTAATGGGGTATAAAGGTTGGATTATTAGATAATAATTCAAAGGTTGGAGTATTAACGGAAAATCGTCG

mRNA sequence

AAAAAAAAAAAAACCTCTCTAAGCCCACAGCCCCAACACGAGGCACGGCCTACTGCCCTCGGTCATCCGGAGCCTTGTAGGCGTTGTAGCCACTTTGTAGCCAAGCCTTGGTTTGGATATACTTGCGGTGTACTTCATTTGCAGTGCCTGGTCTATCAGTGTATCACTAGAACTGCAAAAATGGCGGCATGGTCTCTGCGTCTGCCATTGACAACTCCGTGGAGAACTGGTAATAATTATGGCAGACTCAAACCCTTTTCATATCCATGGAATATTTCTATCTATAAGCATAAAACCCAATTGAATATAAAGCTACTTGCCCATTACTCCACTACTTCATCATCACCTTCAATTTCTGATTCTACTCAAACTCATGAACCCCAAATTCAACCCCAGATTCATGAATCAGTCGCTTCTCCTTCGAAATGGGAATCTTTCCGAAAGAAGAAAGTTGTCATGCGCGTTGGTTATGTTGGTTCCAACTACAAAGGCTTGCAGAAACAACAAGAGGATAACATTCCCACCATTGAAGAAGCTTTGGAGAATGCCCTTTACCAAGCCGGTGCCATCAACGACACCAATTTTGGTAACTTGAACAAAATTGCCTGGGCAAGAAGTAGCCGAACCGATAAAGGAGTTCATTCACTTGCCACGATGATATCTTTGAAAATGGAAATTCCTGATTATGCGTGGATGAATGACCCTAATGGTCTCGTTCTTGCAGACCACGTTAACCAGCATCTCCCTAATGATATAAGAGTGTTTAGTATTTTACCTTCTCAAAGGAGTTTTGATCCTCGACGGGAATGTCATGTCCGGAATTATGCATACCTTCTTCCGGCTGAAGTTATTGGAATAACAAGTCACTCCTCCACTGCTGAAATTGATTATCATATAAAAGACTTCAATGAGATTCTAAATAATTTCGAGGGAGAATATCCTTATCATAATTATACAGCCAGATCAAAATATCGAAGAAGGCCGCTAAAAGGACGTGCAAATAGAAGACACAAAAAATCTAATAAGCTGCCACTTGCAGAGGTAGAGGAAAATAATGACGATTTTCAGTCCTCGGTTGATGATGCAGATGCATTATGTGATGAAGAACTGATCACTGATTTGCCAGACGACAGTGATCTTGATGAGGTGTTTGATTCTGAAGATAGCCATGGTGATGAGTCAGAAAAGAAAAATTCTTCTGTTATTAAAGCTAGATGGCTTCACGAGCGTGATGATGCGGACAAGCTCAGTGCTGCTCACTGGAGAAAGATATTTCAGTGTTCTTGTGGCAAGTTGGATCAGTCACTTGAAATGGGTTTTGTGGAGCTCTCGATATGTGGAGAGTCTTTCATGTTGCATCAAATCCGCAAAATGGTTGGCACCGCTATAGCTGTTAAACGTGGATTGTTTCCCAGAGATATTCTAATGTTGTCACTCAACAAATTCTCGAGAATTGTCCTACCTATTGCTCCATCAGAAGGTTTATTTTTAAGAGGAAATGACTTTAGATTGAGGAAACTTCCTGGAAATAAAAAAAGGCCAGAGATGCAGACCTTAGCTGATTCTGAAGAAATTAAAAAGGAAGTAGATAAGTTCTATGTAACTGTACTGGTACCTCAGGTTTCTAAGTTTTTGGACCCTCATAAGTCTCCCTGGAAGGAATGGATTGAGATTCTGGATGCTAATGCGAGCATACTAGAATCGGAGTTGGATGAAGTCAGAAATGCCTGGAATGCGTGGAATGAAGAATTTCCAAATAGGATTATTTCTAGAAGGAAACCTGGAGCATTAGATGAATGATATGAGATGAATATATAACAATTCAAAATTTGACAAGTGATGGTGCTAGCCTATCTGGAGCATTGTTAAGCATAAGCATCTTCCTGCAACCTGCAGGTTTAGCCGGTAATAATTGATGACGTGGCATGTAATTGTTAAAAAAGTTCGGATGGGTCCCATTTCTCAGGTGAATCTTTAAAAAAATCCCTTATTCCTATTTCTTTTCTTTCTCTGGTCTTTTTCACCCCTTCTTCATCATCTTCCTTCACCCCCACTTCATCATCTTCCTTCACCATTCTCTAGTGAAGACTTAGCTTTAATAATTTTTTTTTCTTTTTTTTGGAAACTCAACGTACCTCCCAACCGAAATCCACCACCTGTTTCTCTCCTCCCCCAGCAGACCCCCTTAATTATCTCCTCCCCTCAGCCAACCACCATTTTATAAAAGGCTAATTTGCATCTGAAAATTGCATGATTTGATGGTGTTGCAGATAAAAAGAAGGCTCAGTTTTTGTTTGATTAACCTTAATTTTATTTTCCCCCTTTTTATTTAAAATTGGAGTAGTTATGAAATAGAAGACCATTAGTAGAACACACATGAGCGACAATGGTGTATAGTGTTTGCTAAATAGGTGGTTTAACCTAAAGTTAGTGATCTATTTCTTGATAGAAAATTCGCAAAAATACAAGGCAATTGAAGGCAGGGATCTTTAACTTACAAAGATAAAAAAGATTGAACTTCTTTTTAATAAGAGGGGCAGTTTTAGTGAAGGGTGGTGGTTGTGTTGTTAGTGTTTTAGCGTGGAGGGTGGTAGGAGGGTTTGGTCTTATTGGTGACGAACTGATGATGATGATGGTGGGTTGGAGGAAGGAAGGCTATGGACTATGGAGTCAGAAGAACTAGATGAAGGAGGAAGAAGACGCATTAAGGGAAAGAAAAAGTGACCTTTCTAGCCGGTTTCAAGTCACTTGGGTTCAATAAAAGTTAATGGGGTATAAAGGTTGGATTATTAGATAATAATTCAAAGGTTGGAGTATTAACGGAAAATCGTCG

Coding sequence (CDS)

ATGGCGGCATGGTCTCTGCGTCTGCCATTGACAACTCCGTGGAGAACTGGTAATAATTATGGCAGACTCAAACCCTTTTCATATCCATGGAATATTTCTATCTATAAGCATAAAACCCAATTGAATATAAAGCTACTTGCCCATTACTCCACTACTTCATCATCACCTTCAATTTCTGATTCTACTCAAACTCATGAACCCCAAATTCAACCCCAGATTCATGAATCAGTCGCTTCTCCTTCGAAATGGGAATCTTTCCGAAAGAAGAAAGTTGTCATGCGCGTTGGTTATGTTGGTTCCAACTACAAAGGCTTGCAGAAACAACAAGAGGATAACATTCCCACCATTGAAGAAGCTTTGGAGAATGCCCTTTACCAAGCCGGTGCCATCAACGACACCAATTTTGGTAACTTGAACAAAATTGCCTGGGCAAGAAGTAGCCGAACCGATAAAGGAGTTCATTCACTTGCCACGATGATATCTTTGAAAATGGAAATTCCTGATTATGCGTGGATGAATGACCCTAATGGTCTCGTTCTTGCAGACCACGTTAACCAGCATCTCCCTAATGATATAAGAGTGTTTAGTATTTTACCTTCTCAAAGGAGTTTTGATCCTCGACGGGAATGTCATGTCCGGAATTATGCATACCTTCTTCCGGCTGAAGTTATTGGAATAACAAGTCACTCCTCCACTGCTGAAATTGATTATCATATAAAAGACTTCAATGAGATTCTAAATAATTTCGAGGGAGAATATCCTTATCATAATTATACAGCCAGATCAAAATATCGAAGAAGGCCGCTAAAAGGACGTGCAAATAGAAGACACAAAAAATCTAATAAGCTGCCACTTGCAGAGGTAGAGGAAAATAATGACGATTTTCAGTCCTCGGTTGATGATGCAGATGCATTATGTGATGAAGAACTGATCACTGATTTGCCAGACGACAGTGATCTTGATGAGGTGTTTGATTCTGAAGATAGCCATGGTGATGAGTCAGAAAAGAAAAATTCTTCTGTTATTAAAGCTAGATGGCTTCACGAGCGTGATGATGCGGACAAGCTCAGTGCTGCTCACTGGAGAAAGATATTTCAGTGTTCTTGTGGCAAGTTGGATCAGTCACTTGAAATGGGTTTTGTGGAGCTCTCGATATGTGGAGAGTCTTTCATGTTGCATCAAATCCGCAAAATGGTTGGCACCGCTATAGCTGTTAAACGTGGATTGTTTCCCAGAGATATTCTAATGTTGTCACTCAACAAATTCTCGAGAATTGTCCTACCTATTGCTCCATCAGAAGGTTTATTTTTAAGAGGAAATGACTTTAGATTGAGGAAACTTCCTGGAAATAAAAAAAGGCCAGAGATGCAGACCTTAGCTGATTCTGAAGAAATTAAAAAGGAAGTAGATAAGTTCTATGTAACTGTACTGGTACCTCAGGTTTCTAAGTTTTTGGACCCTCATAAGTCTCCCTGGAAGGAATGGATTGAGATTCTGGATGCTAATGCGAGCATACTAGAATCGGAGTTGGATGAAGTCAGAAATGCCTGGAATGCGTGGAATGAAGAATTTCCAAATAGGATTATTTCTAGAAGGAAACCTGGAGCATTAGATGAATGA

Protein sequence

MAAWSLRLPLTTPWRTGNNYGRLKPFSYPWNISIYKHKTQLNIKLLAHYSTTSSSPSISDSTQTHEPQIQPQIHESVASPSKWESFRKKKVVMRVGYVGSNYKGLQKQQEDNIPTIEEALENALYQAGAINDTNFGNLNKIAWARSSRTDKGVHSLATMISLKMEIPDYAWMNDPNGLVLADHVNQHLPNDIRVFSILPSQRSFDPRRECHVRNYAYLLPAEVIGITSHSSTAEIDYHIKDFNEILNNFEGEYPYHNYTARSKYRRRPLKGRANRRHKKSNKLPLAEVEENNDDFQSSVDDADALCDEELITDLPDDSDLDEVFDSEDSHGDESEKKNSSVIKARWLHERDDADKLSAAHWRKIFQCSCGKLDQSLEMGFVELSICGESFMLHQIRKMVGTAIAVKRGLFPRDILMLSLNKFSRIVLPIAPSEGLFLRGNDFRLRKLPGNKKRPEMQTLADSEEIKKEVDKFYVTVLVPQVSKFLDPHKSPWKEWIEILDANASILESELDEVRNAWNAWNEEFPNRIISRRKPGALDE

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
Spo23459	Spo23459	gene

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
Spo23459.1	Spo23459.1-protein	polypeptide

The following five_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Spo23459.1.utr5p.1	Spo23459.1.utr5p.1	five_prime_UTR

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Spo23459.1.CDS.8	Spo23459.1.CDS.8	CDS
Spo23459.1.CDS.7	Spo23459.1.CDS.7	CDS
Spo23459.1.CDS.6	Spo23459.1.CDS.6	CDS
Spo23459.1.CDS.5	Spo23459.1.CDS.5	CDS
Spo23459.1.CDS.4	Spo23459.1.CDS.4	CDS
Spo23459.1.CDS.3	Spo23459.1.CDS.3	CDS
Spo23459.1.CDS.2	Spo23459.1.CDS.2	CDS
Spo23459.1.CDS.1	Spo23459.1.CDS.1	CDS

The following three_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Spo23459.1.utr3p.2	Spo23459.1.utr3p.2	three_prime_UTR
Spo23459.1.utr3p.1	Spo23459.1.utr3p.1	three_prime_UTR

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Spo23459.1.exon.9	Spo23459.1.exon.9	exon
Spo23459.1.exon.8	Spo23459.1.exon.8	exon
Spo23459.1.exon.7	Spo23459.1.exon.7	exon
Spo23459.1.exon.6	Spo23459.1.exon.6	exon
Spo23459.1.exon.5	Spo23459.1.exon.5	exon
Spo23459.1.exon.4	Spo23459.1.exon.4	exon
Spo23459.1.exon.3	Spo23459.1.exon.3	exon
Spo23459.1.exon.2	Spo23459.1.exon.2	exon
Spo23459.1.exon.1	Spo23459.1.exon.1	exon

Homology

[Close]

BLAST of Spo23459.1 vs. NCBI nr
Match: gi|902177293|gb|KNA08935.1| (hypothetical protein SOVF_158230 [Spinacia oleracea])

HSP 1 Score: 1085.5 bits (2806), Expect = 0.000e+0
Identity = 539/539 (100.00%), Postives = 539/539 (100.00%), Query Frame = 1


		  
Query: 1   MAAWSLRLPLTTPWRTGNNYGRLKPFSYPWNISIYKHKTQLNIKLLAHYSTTSSSPSISD 60
           MAAWSLRLPLTTPWRTGNNYGRLKPFSYPWNISIYKHKTQLNIKLLAHYSTTSSSPSISD
Sbjct: 1   MAAWSLRLPLTTPWRTGNNYGRLKPFSYPWNISIYKHKTQLNIKLLAHYSTTSSSPSISD 60

Query: 61  STQTHEPQIQPQIHESVASPSKWESFRKKKVVMRVGYVGSNYKGLQKQQEDNIPTIEEAL 120
           STQTHEPQIQPQIHESVASPSKWESFRKKKVVMRVGYVGSNYKGLQKQQEDNIPTIEEAL
Sbjct: 61  STQTHEPQIQPQIHESVASPSKWESFRKKKVVMRVGYVGSNYKGLQKQQEDNIPTIEEAL 120

Query: 121 ENALYQAGAINDTNFGNLNKIAWARSSRTDKGVHSLATMISLKMEIPDYAWMNDPNGLVL 180
           ENALYQAGAINDTNFGNLNKIAWARSSRTDKGVHSLATMISLKMEIPDYAWMNDPNGLVL
Sbjct: 121 ENALYQAGAINDTNFGNLNKIAWARSSRTDKGVHSLATMISLKMEIPDYAWMNDPNGLVL 180

Query: 181 ADHVNQHLPNDIRVFSILPSQRSFDPRRECHVRNYAYLLPAEVIGITSHSSTAEIDYHIK 240
           ADHVNQHLPNDIRVFSILPSQRSFDPRRECHVRNYAYLLPAEVIGITSHSSTAEIDYHIK
Sbjct: 181 ADHVNQHLPNDIRVFSILPSQRSFDPRRECHVRNYAYLLPAEVIGITSHSSTAEIDYHIK 240

Query: 241 DFNEILNNFEGEYPYHNYTARSKYRRRPLKGRANRRHKKSNKLPLAEVEENNDDFQSSVD 300
           DFNEILNNFEGEYPYHNYTARSKYRRRPLKGRANRRHKKSNKLPLAEVEENNDDFQSSVD
Sbjct: 241 DFNEILNNFEGEYPYHNYTARSKYRRRPLKGRANRRHKKSNKLPLAEVEENNDDFQSSVD 300

Query: 301 DADALCDEELITDLPDDSDLDEVFDSEDSHGDESEKKNSSVIKARWLHERDDADKLSAAH 360
           DADALCDEELITDLPDDSDLDEVFDSEDSHGDESEKKNSSVIKARWLHERDDADKLSAAH
Sbjct: 301 DADALCDEELITDLPDDSDLDEVFDSEDSHGDESEKKNSSVIKARWLHERDDADKLSAAH 360

Query: 361 WRKIFQCSCGKLDQSLEMGFVELSICGESFMLHQIRKMVGTAIAVKRGLFPRDILMLSLN 420
           WRKIFQCSCGKLDQSLEMGFVELSICGESFMLHQIRKMVGTAIAVKRGLFPRDILMLSLN
Sbjct: 361 WRKIFQCSCGKLDQSLEMGFVELSICGESFMLHQIRKMVGTAIAVKRGLFPRDILMLSLN 420

Query: 421 KFSRIVLPIAPSEGLFLRGNDFRLRKLPGNKKRPEMQTLADSEEIKKEVDKFYVTVLVPQ 480
           KFSRIVLPIAPSEGLFLRGNDFRLRKLPGNKKRPEMQTLADSEEIKKEVDKFYVTVLVPQ
Sbjct: 421 KFSRIVLPIAPSEGLFLRGNDFRLRKLPGNKKRPEMQTLADSEEIKKEVDKFYVTVLVPQ 480

Query: 481 VSKFLDPHKSPWKEWIEILDANASILESELDEVRNAWNAWNEEFPNRIISRRKPGALDE 540
           VSKFLDPHKSPWKEWIEILDANASILESELDEVRNAWNAWNEEFPNRIISRRKPGALDE
Sbjct: 481 VSKFLDPHKSPWKEWIEILDANASILESELDEVRNAWNAWNEEFPNRIISRRKPGALDE 539

[Close]

BLAST of Spo23459.1 vs. NCBI nr
Match: gi|731349356|ref|XP_010685952.1| (PREDICTED: putative tRNA pseudouridine synthase [Beta vulgaris subsp. vulgaris])

HSP 1 Score: 798.1 bits (2060), Expect = 9.400e-228
Identity = 411/539 (76.25%), Postives = 457/539 (84.79%), Query Frame = 1


		  
Query: 1   MAAWSLRLPLTTPWRTGNNY--GRLKPFSYP--WNISIYKHKTQLNIKLLAHY-STTSSS 60
           MA WSLRLPLT   RT N    GRLKPFS+P  ++ S   H  +LNI LLA Y STTSSS
Sbjct: 1   MAVWSLRLPLTNLSRTSNGSINGRLKPFSHPSTFSFSFSNHPIRLNILLLAQYSSTTSSS 60

Query: 61  PSISDSTQTHEPQIQPQIHESVASPSKWESFRKKKVVMRVGYVGSNYKGLQKQQEDNIPT 120
            +IS  +QT + QIQ QIHE + SP KWE+FRKKKVVMRVGYVG+NYKGLQKQ+EDNI T
Sbjct: 61  STISAFSQT-QTQIQTQIHELIDSPLKWEAFRKKKVVMRVGYVGTNYKGLQKQREDNIRT 120

Query: 121 IEEALENALYQAGAINDTNFGNLNKIAWARSSRTDKGVHSLATMISLKMEIPDYAWMNDP 180
           IEEALENA+Y+AG I D+N+GNLNKIAWARSSRTDKGVHSLAT ISLK+EIP  AWMNDP
Sbjct: 121 IEEALENAIYKAGGIQDSNYGNLNKIAWARSSRTDKGVHSLATTISLKLEIPKDAWMNDP 180

Query: 181 NGLVLADHVNQHLPNDIRVFSILPSQRSFDPRRECHVRNYAYLLPAEVIGITSHSSTAEI 240
           NGLVLADHVN HLP+DIRVFSILPSQRSFDPRRECHVRNY YLLPAE+IGITSHS+T+EI
Sbjct: 181 NGLVLADHVNSHLPDDIRVFSILPSQRSFDPRRECHVRNYTYLLPAEIIGITSHSTTSEI 240

Query: 241 DYHIKDFNEILNNFEGEYPYHNYTARSKYRRRPLKGRANRRHKKSNKLPLAEVEENNDDF 300
           DYHIKDFNEILN FEG++PYHNYTARSKYRR+P KGRANRRHK  N  P  EVEEN+ D 
Sbjct: 241 DYHIKDFNEILNYFEGDHPYHNYTARSKYRRKPPKGRANRRHKSPNNTPPVEVEENHADC 300

Query: 301 QSSVDDADALCDEELITDLPDDSDLDEVFDSEDSHGDESEKKNS-SVIKARWLHERDDAD 360
           Q SVD+ D L DEELIT+  D+SD DE FDSED  G ES KKNS  V++ARWLHE D+AD
Sbjct: 301 QLSVDEVDTLSDEELITNPSDNSDSDEQFDSEDGQGGESGKKNSIEVVRARWLHECDEAD 360

Query: 361 KLSAAHWRKIFQCSCGKLDQSLEMGFVELSICGESFMLHQIRKMVGTAIAVKRGLFPRDI 420
           +LSAAHWRKIFQCSCGKLD+SLEM FVELSICGESFMLHQIRKMVGTAIAVKRGLFPRDI
Sbjct: 361 RLSAAHWRKIFQCSCGKLDRSLEMSFVELSICGESFMLHQIRKMVGTAIAVKRGLFPRDI 420

Query: 421 LMLSLNKFSRIVLPIAPSEGLFLRGNDFRLRKLPGNKKRPEMQTLADSEEIKKEVDKFYV 480
           + LSLNKFSRIVLP+APSE L LRGNDFRLRK PGNKKRPEM  L DS+EI   VDKF+ 
Sbjct: 421 IKLSLNKFSRIVLPLAPSEVLVLRGNDFRLRKQPGNKKRPEMHILVDSKEINSVVDKFFA 480

Query: 481 TVLVPQVSKFLDPHKSPWKEWIEILDANASILESELDEVRNAWNAWNEEFPNRIISRRK 534
           TVL+ Q+SKFLDP +SPWK+W+EILDAN SI ES+LDEVRNAWN WNE F NRI+ +++
Sbjct: 481 TVLLTQLSKFLDPSESPWKDWLEILDANVSIPESQLDEVRNAWNVWNEGFQNRILPKKE 538

[Close]

BLAST of Spo23459.1 vs. NCBI nr
Match: gi|848852283|ref|XP_012839130.1| (PREDICTED: putative tRNA pseudouridine synthase [Erythranthe guttata])

HSP 1 Score: 535.0 bits (1377), Expect = 1.500e-148
Identity = 275/446 (61.66%), Postives = 345/446 (77.35%), Query Frame = 1


		  
Query: 82  KWESFRKKKVVMRVGYVGSNYKGLQKQQED-NIPTIEEALENALYQAGAINDTNFGNLNK 141
           KWE FRKKKVVMRVGYVGS+YKGLQ Q++     TIE  LENA+Y+AG I D+NFG+LNK
Sbjct: 58  KWEPFRKKKVVMRVGYVGSDYKGLQIQRDQPEFSTIEGELENAIYKAGGIRDSNFGDLNK 117

Query: 142 IAWARSSRTDKGVHSLATMISLKMEIPDYAWMNDPNGLVLADHVNQHLPNDIRVFSILPS 201
           I WARSSRTDKGVHSLATMI+LK+EIP+ AW NDPNG  LA +VN +LP +IRVFSILPS
Sbjct: 118 IGWARSSRTDKGVHSLATMITLKLEIPESAWNNDPNGFALATYVNSYLPRNIRVFSILPS 177

Query: 202 QRSFDPRRECHVRNYAYLLPAEVIGITSHSSTAEIDYHIKDFNEILNNFEGEYPYHNYTA 261
           QRSFD RREC +R Y+YLLPAE+IG+  +S+ +E+D+H+ DFN+ILN F+GE+P+HNYT 
Sbjct: 178 QRSFDARRECSIRKYSYLLPAEIIGVKENSTASEVDHHLSDFNDILNTFQGEHPFHNYTV 237

Query: 262 RSKYRRR-PLKGRANRRHKKSNKLPLAEVEENNDDFQSSVDDADALCDEELITDLPDDSD 321
           RSKYR++ P KG +  +  KS  +    V E +DD +   D    +  E L T+  +++ 
Sbjct: 238 RSKYRKQFPKKGSSASKMGKSLDVQSEFVSEGSDDEEEEEDTN--VVTESLATEA-EETK 297

Query: 322 LDEVFDSEDSHGDESEKKNS-SVIKARWLHERDDADKLSAAHWRKIFQCSCGKLDQSLEM 381
            D +   ++   D+ +K+N  S + ARWLHE D+ D++SA+H+RKIFQCSCGKL+Q   M
Sbjct: 298 YDSLLPKDEE--DQPKKQNLVSPVLARWLHEPDEKDRISASHFRKIFQCSCGKLEQLSGM 357

Query: 382 GFVELSICGESFMLHQIRKMVGTAIAVKRGLFPRDILMLSLNKFSRIVLPIAPSEGLFLR 441
            FVE+SICGESFMLHQIRKMVGTAIAVKR L PRDIL LSL+KFSRIV+P+APSE L LR
Sbjct: 358 NFVEISICGESFMLHQIRKMVGTAIAVKRDLLPRDILKLSLSKFSRIVVPLAPSEVLILR 417

Query: 442 GNDFRLRKLPGNKKRPEMQTLADSEEIKKEVDKFYVTVLVPQVSKFLDPHKSPWKEWIEI 501
           GN+F +R  PGN KRPEM TL +S+EI K VD FY +V++PQ+S FLDP KSPW EW+++
Sbjct: 418 GNNFVIRNRPGNIKRPEMLTLVESKEILKLVDDFYYSVMLPQLSVFLDPVKSPWNEWVDL 477

Query: 502 LDANASILESELDEVRNAWNAWNEEF 525
           LDAN  I ES+L+EVR+AW  W EEF
Sbjct: 478 LDANTCIPESQLEEVRSAWKLWREEF 498

[Close]

BLAST of Spo23459.1 vs. NCBI nr
Match: gi|823143796|ref|XP_012471711.1| (PREDICTED: putative tRNA pseudouridine synthase [Gossypium raimondii])

HSP 1 Score: 535.0 bits (1377), Expect = 1.500e-148
Identity = 274/455 (60.22%), Postives = 347/455 (76.26%), Query Frame = 1


		  
Query: 79  SPSKWESFRKKKVVMRVGYVGSNYKGLQKQQEDN-IPTIEEALENALYQAGAINDTNFGN 138
           S  KWE FRKKKVVMRVGYVG++Y+GLQ Q++++ + TIE  LE A+++AG I D+N+G+
Sbjct: 50  SACKWEPFRKKKVVMRVGYVGTDYRGLQLQRDEHELSTIENELETAIFKAGGIRDSNYGD 109

Query: 139 LNKIAWARSSRTDKGVHSLATMISLKMEIPDYAWMNDPNGLVLADHVNQHLPNDIRVFSI 198
           L+KIAWARSSRTDKGVHSLATMISLKMEIP+ AW  DPNG+ LA  VN +LP++IRVFSI
Sbjct: 110 LHKIAWARSSRTDKGVHSLATMISLKMEIPEDAWKEDPNGIALAKCVNSYLPDNIRVFSI 169

Query: 199 LPSQRSFDPRRECHVRNYAYLLPAEVIGITSHSSTAEIDYHIKDFNEILNNFEGEYPYHN 258
           LPSQ+SFDPRREC++R Y+YLLPAE+IGI SH + AE +YHI DFN ILN FEGE+P+HN
Sbjct: 170 LPSQKSFDPRRECNLRKYSYLLPAEIIGIKSHFTEAETNYHISDFNSILNCFEGEHPFHN 229

Query: 259 YTARSKYRRR-PLKGRANR----RHKKSNKLPLAEVEENNDDFQSSVDDADALCDEELIT 318
           YT R+KYRRR P +  A      R K  N    +E+EE++ +  + +D+   + +EE+  
Sbjct: 230 YTQRAKYRRRVPPRQTARNGRPPRAKSHNGSSTSEMEESDVEEDTRIDETSTVNNEEMSC 289

Query: 319 DLPDDSDLDEVFDSEDSHGDESEKKNSSVIKARWLHERDDADKLSAAHWRKIFQCSCGKL 378
                   + V DS +S G+ S+ ++  V+ ARWLHE D+ D+++ +H+RKIF CSCGKL
Sbjct: 290 GFG-----EPVVDSCNSQGNGSKDQSPKVVIARWLHEPDETDRITGSHFRKIFHCSCGKL 349

Query: 379 DQSLEMGFVELSICGESFMLHQIRKMVGTAIAVKRGLFPRDILMLSLNKFSRIVLPIAPS 438
             S+   +VE+SI GESFMLHQIRKMVGTA+AVKR L PRDIL LSL KFSR+VLP+APS
Sbjct: 350 QNSMGFDYVEISIWGESFMLHQIRKMVGTAVAVKRKLLPRDILTLSLAKFSRVVLPLAPS 409

Query: 439 EGLFLRGNDFRLRKLPGNKKRPEMQTLADSEEIKKEVDKFYVTVLVPQVSKFLDPHKSPW 498
           E L LRGN F LRK PGN  RPEM T+ +S+EI K VD+FY +V++PQVSKFLDP KSPW
Sbjct: 410 EVLILRGNTFILRKAPGNVTRPEMLTMVESKEILKAVDEFYKSVMLPQVSKFLDPSKSPW 469

Query: 499 KEWIEILDANASILESELDEVRNAWNAWNEEFPNR 528
           +EW+E LD N  I ++ELDEVRNAW  W E+ P R
Sbjct: 470 EEWVENLDFNTGIPDAELDEVRNAWKLWKEKLPIR 499

[Close]

BLAST of Spo23459.1 vs. NCBI nr
Match: gi|590591522|ref|XP_007017040.1| (Pseudouridine synthase family protein [Theobroma cacao])

HSP 1 Score: 532.3 bits (1370), Expect = 9.600e-148
Identity = 274/457 (59.96%), Postives = 350/457 (76.59%), Query Frame = 1


		  
Query: 78  ASPSKWESFRKKKVVMRVGYVGSNYKGLQKQQEDN-IPTIEEALENALYQAGAINDTNFG 137
           ASP KWE FRKKKVVMRVGYVG+NY+GLQ Q++++ + TIE  LE A+++AG I D+N+G
Sbjct: 47  ASP-KWEPFRKKKVVMRVGYVGTNYRGLQVQRDEHQLSTIENELETAIFKAGGIRDSNYG 106

Query: 138 NLNKIAWARSSRTDKGVHSLATMISLKMEIPDYAWMNDPNGLVLADHVNQHLPNDIRVFS 197
           +L+KIAWARSSRTDKGVHSLATMI+LKMEIP+ AW  DPNG+ LA  VN +LP+ I+VFS
Sbjct: 107 DLHKIAWARSSRTDKGVHSLATMITLKMEIPEDAWKEDPNGIALAKCVNSYLPDSIKVFS 166

Query: 198 ILPSQRSFDPRRECHVRNYAYLLPAEVIGITSHSSTAEIDYHIKDFNEILNNFEGEYPYH 257
           ILPSQ+SFDPRREC++R Y+YLLPAE+IGI SH S AEI++HI DFN ILN FEGE+P+H
Sbjct: 167 ILPSQKSFDPRRECNLRKYSYLLPAEIIGIKSHFSEAEINHHISDFNSILNCFEGEHPFH 226

Query: 258 NYTARSKYRRR------PLKGRANRRHKKSNKLPLAEVEENNDDFQSSVDDADALCDEEL 317
           NYT R+KYRR+         GR  +  +  ++   +E+EE++ +    +++   L  EE 
Sbjct: 227 NYTQRAKYRRQIPPRQTARNGRVPKGAEAHDESSTSELEESDVEEDPRIEETTTLNSEEK 286

Query: 318 ITDLPDDSDLDEVFDSEDSHGDESEKKNSSVI-KARWLHERDDADKLSAAHWRKIFQCSC 377
            T   +        D  D  G+  + ++S+V+ +ARWL+E D+ D+++A+H+RKIF CSC
Sbjct: 287 STSFDEPR-----VDCCDGQGNSLQYQSSNVVVRARWLYEPDETDRITASHFRKIFLCSC 346

Query: 378 GKLDQSLEMGFVELSICGESFMLHQIRKMVGTAIAVKRGLFPRDILMLSLNKFSRIVLPI 437
           G+L+ S+   ++E+SI GESFMLHQIRKMVGTA+AVKR LFPRDIL LSL KFSRIVLP+
Sbjct: 347 GRLENSMGFDYIEISIWGESFMLHQIRKMVGTAVAVKRNLFPRDILTLSLAKFSRIVLPL 406

Query: 438 APSEGLFLRGNDFRLRKLPGNKKRPEMQTLADSEEIKKEVDKFYVTVLVPQVSKFLDPHK 497
           APSE L LRGN F LRK+P N  RPEM T+ +SEEI KEVDKFY +VL+PQVSKFLDP K
Sbjct: 407 APSEVLILRGNTFILRKMPSNITRPEMLTMVESEEILKEVDKFYRSVLLPQVSKFLDPSK 466

Query: 498 SPWKEWIEILDANASILESELDEVRNAWNAWNEEFPN 527
           SPWKEW+E LDAN S+ ++ELDEVR AW  W E+  N
Sbjct: 467 SPWKEWVENLDANTSVPDAELDEVRTAWKLWKEKLLN 497

[Close]

BLAST of Spo23459.1 vs. UniProtKB/TrEMBL
Match: A0A0K9QNW4_SPIOL (Uncharacterized protein OS=Spinacia oleracea GN=SOVF_158230 PE=4 SV=1)

HSP 1 Score: 1085.5 bits (2806), Expect = 0.000e+0
Identity = 539/539 (100.00%), Postives = 539/539 (100.00%), Query Frame = 1


		  
Query: 1   MAAWSLRLPLTTPWRTGNNYGRLKPFSYPWNISIYKHKTQLNIKLLAHYSTTSSSPSISD 60
           MAAWSLRLPLTTPWRTGNNYGRLKPFSYPWNISIYKHKTQLNIKLLAHYSTTSSSPSISD
Sbjct: 1   MAAWSLRLPLTTPWRTGNNYGRLKPFSYPWNISIYKHKTQLNIKLLAHYSTTSSSPSISD 60

Query: 61  STQTHEPQIQPQIHESVASPSKWESFRKKKVVMRVGYVGSNYKGLQKQQEDNIPTIEEAL 120
           STQTHEPQIQPQIHESVASPSKWESFRKKKVVMRVGYVGSNYKGLQKQQEDNIPTIEEAL
Sbjct: 61  STQTHEPQIQPQIHESVASPSKWESFRKKKVVMRVGYVGSNYKGLQKQQEDNIPTIEEAL 120

Query: 121 ENALYQAGAINDTNFGNLNKIAWARSSRTDKGVHSLATMISLKMEIPDYAWMNDPNGLVL 180
           ENALYQAGAINDTNFGNLNKIAWARSSRTDKGVHSLATMISLKMEIPDYAWMNDPNGLVL
Sbjct: 121 ENALYQAGAINDTNFGNLNKIAWARSSRTDKGVHSLATMISLKMEIPDYAWMNDPNGLVL 180

Query: 181 ADHVNQHLPNDIRVFSILPSQRSFDPRRECHVRNYAYLLPAEVIGITSHSSTAEIDYHIK 240
           ADHVNQHLPNDIRVFSILPSQRSFDPRRECHVRNYAYLLPAEVIGITSHSSTAEIDYHIK
Sbjct: 181 ADHVNQHLPNDIRVFSILPSQRSFDPRRECHVRNYAYLLPAEVIGITSHSSTAEIDYHIK 240

Query: 241 DFNEILNNFEGEYPYHNYTARSKYRRRPLKGRANRRHKKSNKLPLAEVEENNDDFQSSVD 300
           DFNEILNNFEGEYPYHNYTARSKYRRRPLKGRANRRHKKSNKLPLAEVEENNDDFQSSVD
Sbjct: 241 DFNEILNNFEGEYPYHNYTARSKYRRRPLKGRANRRHKKSNKLPLAEVEENNDDFQSSVD 300

Query: 301 DADALCDEELITDLPDDSDLDEVFDSEDSHGDESEKKNSSVIKARWLHERDDADKLSAAH 360
           DADALCDEELITDLPDDSDLDEVFDSEDSHGDESEKKNSSVIKARWLHERDDADKLSAAH
Sbjct: 301 DADALCDEELITDLPDDSDLDEVFDSEDSHGDESEKKNSSVIKARWLHERDDADKLSAAH 360

Query: 361 WRKIFQCSCGKLDQSLEMGFVELSICGESFMLHQIRKMVGTAIAVKRGLFPRDILMLSLN 420
           WRKIFQCSCGKLDQSLEMGFVELSICGESFMLHQIRKMVGTAIAVKRGLFPRDILMLSLN
Sbjct: 361 WRKIFQCSCGKLDQSLEMGFVELSICGESFMLHQIRKMVGTAIAVKRGLFPRDILMLSLN 420

Query: 421 KFSRIVLPIAPSEGLFLRGNDFRLRKLPGNKKRPEMQTLADSEEIKKEVDKFYVTVLVPQ 480
           KFSRIVLPIAPSEGLFLRGNDFRLRKLPGNKKRPEMQTLADSEEIKKEVDKFYVTVLVPQ
Sbjct: 421 KFSRIVLPIAPSEGLFLRGNDFRLRKLPGNKKRPEMQTLADSEEIKKEVDKFYVTVLVPQ 480

Query: 481 VSKFLDPHKSPWKEWIEILDANASILESELDEVRNAWNAWNEEFPNRIISRRKPGALDE 540
           VSKFLDPHKSPWKEWIEILDANASILESELDEVRNAWNAWNEEFPNRIISRRKPGALDE
Sbjct: 481 VSKFLDPHKSPWKEWIEILDANASILESELDEVRNAWNAWNEEFPNRIISRRKPGALDE 539

[Close]

BLAST of Spo23459.1 vs. UniProtKB/TrEMBL
Match: A0A0J8EQX1_BETVU (Uncharacterized protein OS=Beta vulgaris subsp. vulgaris GN=BVRB_7g175580 PE=4 SV=1)

HSP 1 Score: 798.1 bits (2060), Expect = 6.500e-228
Identity = 411/539 (76.25%), Postives = 457/539 (84.79%), Query Frame = 1


		  
Query: 1   MAAWSLRLPLTTPWRTGNNY--GRLKPFSYP--WNISIYKHKTQLNIKLLAHY-STTSSS 60
           MA WSLRLPLT   RT N    GRLKPFS+P  ++ S   H  +LNI LLA Y STTSSS
Sbjct: 1   MAVWSLRLPLTNLSRTSNGSINGRLKPFSHPSTFSFSFSNHPIRLNILLLAQYSSTTSSS 60

Query: 61  PSISDSTQTHEPQIQPQIHESVASPSKWESFRKKKVVMRVGYVGSNYKGLQKQQEDNIPT 120
            +IS  +QT + QIQ QIHE + SP KWE+FRKKKVVMRVGYVG+NYKGLQKQ+EDNI T
Sbjct: 61  STISAFSQT-QTQIQTQIHELIDSPLKWEAFRKKKVVMRVGYVGTNYKGLQKQREDNIRT 120

Query: 121 IEEALENALYQAGAINDTNFGNLNKIAWARSSRTDKGVHSLATMISLKMEIPDYAWMNDP 180
           IEEALENA+Y+AG I D+N+GNLNKIAWARSSRTDKGVHSLAT ISLK+EIP  AWMNDP
Sbjct: 121 IEEALENAIYKAGGIQDSNYGNLNKIAWARSSRTDKGVHSLATTISLKLEIPKDAWMNDP 180

Query: 181 NGLVLADHVNQHLPNDIRVFSILPSQRSFDPRRECHVRNYAYLLPAEVIGITSHSSTAEI 240
           NGLVLADHVN HLP+DIRVFSILPSQRSFDPRRECHVRNY YLLPAE+IGITSHS+T+EI
Sbjct: 181 NGLVLADHVNSHLPDDIRVFSILPSQRSFDPRRECHVRNYTYLLPAEIIGITSHSTTSEI 240

Query: 241 DYHIKDFNEILNNFEGEYPYHNYTARSKYRRRPLKGRANRRHKKSNKLPLAEVEENNDDF 300
           DYHIKDFNEILN FEG++PYHNYTARSKYRR+P KGRANRRHK  N  P  EVEEN+ D 
Sbjct: 241 DYHIKDFNEILNYFEGDHPYHNYTARSKYRRKPPKGRANRRHKSPNNTPPVEVEENHADC 300

Query: 301 QSSVDDADALCDEELITDLPDDSDLDEVFDSEDSHGDESEKKNS-SVIKARWLHERDDAD 360
           Q SVD+ D L DEELIT+  D+SD DE FDSED  G ES KKNS  V++ARWLHE D+AD
Sbjct: 301 QLSVDEVDTLSDEELITNPSDNSDSDEQFDSEDGQGGESGKKNSIEVVRARWLHECDEAD 360

Query: 361 KLSAAHWRKIFQCSCGKLDQSLEMGFVELSICGESFMLHQIRKMVGTAIAVKRGLFPRDI 420
           +LSAAHWRKIFQCSCGKLD+SLEM FVELSICGESFMLHQIRKMVGTAIAVKRGLFPRDI
Sbjct: 361 RLSAAHWRKIFQCSCGKLDRSLEMSFVELSICGESFMLHQIRKMVGTAIAVKRGLFPRDI 420

Query: 421 LMLSLNKFSRIVLPIAPSEGLFLRGNDFRLRKLPGNKKRPEMQTLADSEEIKKEVDKFYV 480
           + LSLNKFSRIVLP+APSE L LRGNDFRLRK PGNKKRPEM  L DS+EI   VDKF+ 
Sbjct: 421 IKLSLNKFSRIVLPLAPSEVLVLRGNDFRLRKQPGNKKRPEMHILVDSKEINSVVDKFFA 480

Query: 481 TVLVPQVSKFLDPHKSPWKEWIEILDANASILESELDEVRNAWNAWNEEFPNRIISRRK 534
           TVL+ Q+SKFLDP +SPWK+W+EILDAN SI ES+LDEVRNAWN WNE F NRI+ +++
Sbjct: 481 TVLLTQLSKFLDPSESPWKDWLEILDANVSIPESQLDEVRNAWNVWNEGFQNRILPKKE 538

[Close]

BLAST of Spo23459.1 vs. UniProtKB/TrEMBL
Match: A0A0D2QL35_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_003G151400 PE=4 SV=1)

HSP 1 Score: 535.0 bits (1377), Expect = 1.000e-148
Identity = 274/455 (60.22%), Postives = 347/455 (76.26%), Query Frame = 1


		  
Query: 79  SPSKWESFRKKKVVMRVGYVGSNYKGLQKQQEDN-IPTIEEALENALYQAGAINDTNFGN 138
           S  KWE FRKKKVVMRVGYVG++Y+GLQ Q++++ + TIE  LE A+++AG I D+N+G+
Sbjct: 50  SACKWEPFRKKKVVMRVGYVGTDYRGLQLQRDEHELSTIENELETAIFKAGGIRDSNYGD 109

Query: 139 LNKIAWARSSRTDKGVHSLATMISLKMEIPDYAWMNDPNGLVLADHVNQHLPNDIRVFSI 198
           L+KIAWARSSRTDKGVHSLATMISLKMEIP+ AW  DPNG+ LA  VN +LP++IRVFSI
Sbjct: 110 LHKIAWARSSRTDKGVHSLATMISLKMEIPEDAWKEDPNGIALAKCVNSYLPDNIRVFSI 169

Query: 199 LPSQRSFDPRRECHVRNYAYLLPAEVIGITSHSSTAEIDYHIKDFNEILNNFEGEYPYHN 258
           LPSQ+SFDPRREC++R Y+YLLPAE+IGI SH + AE +YHI DFN ILN FEGE+P+HN
Sbjct: 170 LPSQKSFDPRRECNLRKYSYLLPAEIIGIKSHFTEAETNYHISDFNSILNCFEGEHPFHN 229

Query: 259 YTARSKYRRR-PLKGRANR----RHKKSNKLPLAEVEENNDDFQSSVDDADALCDEELIT 318
           YT R+KYRRR P +  A      R K  N    +E+EE++ +  + +D+   + +EE+  
Sbjct: 230 YTQRAKYRRRVPPRQTARNGRPPRAKSHNGSSTSEMEESDVEEDTRIDETSTVNNEEMSC 289

Query: 319 DLPDDSDLDEVFDSEDSHGDESEKKNSSVIKARWLHERDDADKLSAAHWRKIFQCSCGKL 378
                   + V DS +S G+ S+ ++  V+ ARWLHE D+ D+++ +H+RKIF CSCGKL
Sbjct: 290 GFG-----EPVVDSCNSQGNGSKDQSPKVVIARWLHEPDETDRITGSHFRKIFHCSCGKL 349

Query: 379 DQSLEMGFVELSICGESFMLHQIRKMVGTAIAVKRGLFPRDILMLSLNKFSRIVLPIAPS 438
             S+   +VE+SI GESFMLHQIRKMVGTA+AVKR L PRDIL LSL KFSR+VLP+APS
Sbjct: 350 QNSMGFDYVEISIWGESFMLHQIRKMVGTAVAVKRKLLPRDILTLSLAKFSRVVLPLAPS 409

Query: 439 EGLFLRGNDFRLRKLPGNKKRPEMQTLADSEEIKKEVDKFYVTVLVPQVSKFLDPHKSPW 498
           E L LRGN F LRK PGN  RPEM T+ +S+EI K VD+FY +V++PQVSKFLDP KSPW
Sbjct: 410 EVLILRGNTFILRKAPGNVTRPEMLTMVESKEILKAVDEFYKSVMLPQVSKFLDPSKSPW 469

Query: 499 KEWIEILDANASILESELDEVRNAWNAWNEEFPNR 528
           +EW+E LD N  I ++ELDEVRNAW  W E+ P R
Sbjct: 470 EEWVENLDFNTGIPDAELDEVRNAWKLWKEKLPIR 499

[Close]

BLAST of Spo23459.1 vs. UniProtKB/TrEMBL
Match: A0A022S0A4_ERYGU (Uncharacterized protein OS=Erythranthe guttata GN=MIMGU_mgv1a004890mg PE=4 SV=1)

HSP 1 Score: 535.0 bits (1377), Expect = 1.000e-148
Identity = 275/446 (61.66%), Postives = 345/446 (77.35%), Query Frame = 1


		  
Query: 82  KWESFRKKKVVMRVGYVGSNYKGLQKQQED-NIPTIEEALENALYQAGAINDTNFGNLNK 141
           KWE FRKKKVVMRVGYVGS+YKGLQ Q++     TIE  LENA+Y+AG I D+NFG+LNK
Sbjct: 58  KWEPFRKKKVVMRVGYVGSDYKGLQIQRDQPEFSTIEGELENAIYKAGGIRDSNFGDLNK 117

Query: 142 IAWARSSRTDKGVHSLATMISLKMEIPDYAWMNDPNGLVLADHVNQHLPNDIRVFSILPS 201
           I WARSSRTDKGVHSLATMI+LK+EIP+ AW NDPNG  LA +VN +LP +IRVFSILPS
Sbjct: 118 IGWARSSRTDKGVHSLATMITLKLEIPESAWNNDPNGFALATYVNSYLPRNIRVFSILPS 177

Query: 202 QRSFDPRRECHVRNYAYLLPAEVIGITSHSSTAEIDYHIKDFNEILNNFEGEYPYHNYTA 261
           QRSFD RREC +R Y+YLLPAE+IG+  +S+ +E+D+H+ DFN+ILN F+GE+P+HNYT 
Sbjct: 178 QRSFDARRECSIRKYSYLLPAEIIGVKENSTASEVDHHLSDFNDILNTFQGEHPFHNYTV 237

Query: 262 RSKYRRR-PLKGRANRRHKKSNKLPLAEVEENNDDFQSSVDDADALCDEELITDLPDDSD 321
           RSKYR++ P KG +  +  KS  +    V E +DD +   D    +  E L T+  +++ 
Sbjct: 238 RSKYRKQFPKKGSSASKMGKSLDVQSEFVSEGSDDEEEEEDTN--VVTESLATEA-EETK 297

Query: 322 LDEVFDSEDSHGDESEKKNS-SVIKARWLHERDDADKLSAAHWRKIFQCSCGKLDQSLEM 381
            D +   ++   D+ +K+N  S + ARWLHE D+ D++SA+H+RKIFQCSCGKL+Q   M
Sbjct: 298 YDSLLPKDEE--DQPKKQNLVSPVLARWLHEPDEKDRISASHFRKIFQCSCGKLEQLSGM 357

Query: 382 GFVELSICGESFMLHQIRKMVGTAIAVKRGLFPRDILMLSLNKFSRIVLPIAPSEGLFLR 441
            FVE+SICGESFMLHQIRKMVGTAIAVKR L PRDIL LSL+KFSRIV+P+APSE L LR
Sbjct: 358 NFVEISICGESFMLHQIRKMVGTAIAVKRDLLPRDILKLSLSKFSRIVVPLAPSEVLILR 417

Query: 442 GNDFRLRKLPGNKKRPEMQTLADSEEIKKEVDKFYVTVLVPQVSKFLDPHKSPWKEWIEI 501
           GN+F +R  PGN KRPEM TL +S+EI K VD FY +V++PQ+S FLDP KSPW EW+++
Sbjct: 418 GNNFVIRNRPGNIKRPEMLTLVESKEILKLVDDFYYSVMLPQLSVFLDPVKSPWNEWVDL 477

Query: 502 LDANASILESELDEVRNAWNAWNEEF 525
           LDAN  I ES+L+EVR+AW  W EEF
Sbjct: 478 LDANTCIPESQLEEVRSAWKLWREEF 498

[Close]

BLAST of Spo23459.1 vs. UniProtKB/TrEMBL
Match: A0A0B0MNG3_GOSAR (Uncharacterized protein OS=Gossypium arboreum GN=F383_22524 PE=4 SV=1)

HSP 1 Score: 530.8 bits (1366), Expect = 1.900e-147
Identity = 281/517 (54.35%), Postives = 368/517 (71.18%), Query Frame = 1


		  
Query: 29  PWNISIYKHKTQLNIKLLAHYSTTSSSPSISDSTQTHEPQIQPQIHESVASPSKWESFRK 88
           PW +   + +  L +K      T  SS  + D  +   P           S  KWE FRK
Sbjct: 12  PWLVKTPRPRPTLKVKPFRIICTAQSS--VVDEKELPLP----------LSACKWEPFRK 71

Query: 89  KKVVMRVGYVGSNYKGLQKQQEDN-IPTIEEALENALYQAGAINDTNFGNLNKIAWARSS 148
           KKVVMRVGYVG++Y+GLQ Q++++ + TIE  LE A+++AG I D+N+G+L+KIAWARSS
Sbjct: 72  KKVVMRVGYVGTDYRGLQLQRDEHELSTIENELETAIFKAGGIRDSNYGDLHKIAWARSS 131

Query: 149 RTDKGVHSLATMISLKMEIPDYAWMNDPNGLVLADHVNQHLPNDIRVFSILPSQRSFDPR 208
           RTDKGVHSLATMISLKMEIP+ AW  DP+G+ LA+ VN +LP++IRVFSILPSQ+SFDPR
Sbjct: 132 RTDKGVHSLATMISLKMEIPEDAWKEDPSGVALANCVNSYLPDNIRVFSILPSQKSFDPR 191

Query: 209 RECHVRNYAYLLPAEVIGITSHSSTAEIDYHIKDFNEILNNFEGEYPYHNYTARSKYRRR 268
           REC++R Y+YLLPAE+IGI SH + AE + HI DFN ILN FEGE+P+HNYT R+KYR R
Sbjct: 192 RECNLRKYSYLLPAEIIGIKSHFTEAETNCHISDFNSILNCFEGEHPFHNYTQRAKYRSR 251

Query: 269 -PLKGRANR----RHKKSNKLPLAEVEENNDDFQSSVDDADALCDEELITDLPDDSDLDE 328
            P +  A      R K  N    +E+EE++ +  + +D+  ++ +EE+          + 
Sbjct: 252 VPPRQTARNGRPPRAKSHNGSSTSEIEESDVEEDTRIDETSSVNNEEMSCGFG-----EP 311

Query: 329 VFDSEDSHGDESEKKNSSVIKARWLHERDDADKLSAAHWRKIFQCSCGKLDQSLEMGFVE 388
           V DS +S G+ S+ ++  V+ ARWLHE D+ D+++++H+RKIF+CSCGKL  S+   +VE
Sbjct: 312 VVDSCNSQGNGSKDQSPKVVIARWLHEPDETDRITSSHFRKIFRCSCGKLQNSMGFDYVE 371

Query: 389 LSICGESFMLHQIRKMVGTAIAVKRGLFPRDILMLSLNKFSRIVLPIAPSEGLFLRGNDF 448
           +SI GESFMLHQIRKMVGTA+AVKR L PRDIL LSL KFSR+VLP+APSE L LRGN F
Sbjct: 372 ISIWGESFMLHQIRKMVGTAVAVKRKLLPRDILTLSLAKFSRVVLPLAPSEVLILRGNTF 431

Query: 449 RLRKLPGNKKRPEMQTLADSEEIKKEVDKFYVTVLVPQVSKFLDPHKSPWKEWIEILDAN 508
            LRK PGN  RPEM  + +SEEI K +D+FY +V++PQVSKFLDP KSPW+EW+E LD N
Sbjct: 432 ILRKAPGNVTRPEMLVMVESEEILKAIDEFYKSVMLPQVSKFLDPSKSPWEEWVENLDFN 491

Query: 509 ASILESELDEVRNAWNAWNEEFPNRIISRRKPGALDE 540
             I ++ELDEVRNAW  W E+ P R  S    G +++
Sbjct: 492 TGIPDAELDEVRNAWKLWKEKLPIRRTSSAPAGQMNQ 511

[Close]

BLAST of Spo23459.1 vs. ExPASy Swiss-Prot
Match: PUSH_ARATH (Putative tRNA pseudouridine synthase OS=Arabidopsis thaliana GN=At2g30320 PE=3 SV=1)

HSP 1 Score: 486.5 bits (1251), Expect = 3.800e-136
Identity = 248/446 (55.61%), Postives = 327/446 (73.32%), Query Frame = 1


		  
Query: 82  KWESFRKKKVVMRVGYVGSNYKGLQKQQED-NIPTIEEALENALYQAGAINDTNFGNLNK 141
           KWES+RKKKVV+R+GYVG++Y+GLQ Q++D +I TIE  LE A+Y+AG I D+N+G+L+K
Sbjct: 56  KWESYRKKKVVIRIGYVGTDYRGLQIQRDDPSIKTIEGELEVAIYKAGGIRDSNYGDLHK 115

Query: 142 IAWARSSRTDKGVHSLATMISLKMEIPDYAWMNDPNGLVLADHVNQHLPNDIRVFSILPS 201
           I WARSSRTDKGVHSLAT ISLKMEIP+ AW +DP G VLA  +++HLP +IRVFS+LPS
Sbjct: 116 IGWARSSRTDKGVHSLATSISLKMEIPETAWKDDPQGTVLAKCISKHLPENIRVFSVLPS 175

Query: 202 QRSFDPRRECHVRNYAYLLPAEVIGITSHSSTAEIDYHIKDFNEILNNFEGEYPYHNYTA 261
            R FDPRREC +R Y+YLLP +V+GI +  ++ EIDYHI DFNEIL  FEGEYP+HNYT 
Sbjct: 176 NRRFDPRRECTLRKYSYLLPVDVLGIKNSFTSDEIDYHITDFNEILKEFEGEYPFHNYTQ 235

Query: 262 RSKYRRRPLKGRANRRHKKSNKLPLAEVEENNDDFQSSVDDADALCDEELITDLPDDSDL 321
           RS+YRR     ++ ++ K+ N  P  E          S+  +++   EE   ++ ++ + 
Sbjct: 236 RSRYRR-----KSEQKIKQRNGRPPRE--------PKSIKASESEFREENHIEIGEEEEE 295

Query: 322 DEVFDSEDSHGDESEKKNSSVI-KARWLHERDDADKLSAAHWRKIFQCSCGKLDQSLEMG 381
            EV    D H    +  NS V  +A+WL+E D+ DK+S AH+RK+F+C  GKL+ SL  G
Sbjct: 296 KEVDGESDEHVVTPDSDNSQVYSRAKWLYEPDETDKISGAHFRKVFRCRSGKLENSLGFG 355

Query: 382 FVELSICGESFMLHQIRKMVGTAIAVKRGLFPRDILMLSLNKFSRIVLPIAPSEGLFLRG 441
           FVE+SI GESFMLHQIRKM+GTA+AVKR L PRDI+ LSLNKF+RIVLP+APSE L LRG
Sbjct: 356 FVEISIWGESFMLHQIRKMIGTAVAVKRELLPRDIIRLSLNKFTRIVLPLAPSEVLILRG 415

Query: 442 NDFRLRKLPGNKKRPEMQTLADSEEIKKEVDKFYVTVLVPQVSKFLDPHKSPWKEWIEIL 501
           N F +R+LP   +RP M+   +SEE++KE+++FY  V+VPQVS FLD  KSPWKEW++ L
Sbjct: 416 NSFEVRRLP---ERPGMEATGESEEVEKEIEEFYRAVMVPQVSIFLDSEKSPWKEWVDHL 475

Query: 502 DANASILESELDEVRNAWNAWNEEFP 526
           D N  +++ EL++VR  W  W    P
Sbjct: 476 DRNDGLIDEELEDVRKGWEEWKAAKP 485

[Close]

BLAST of Spo23459.1 vs. ExPASy Swiss-Prot
Match: PUS1_KLULA (tRNA pseudouridine synthase 1 OS=Kluyveromyces lactis (strain ATCC 8585 / CBS 2359 / DSM 70799 / NBRC 1267 / NRRL Y-1140 / WM37) GN=PUS1 PE=3 SV=1)

HSP 1 Score: 100.9 bits (250), Expect = 4.500e-20
Identity = 115/403 (28.54%), Postives = 187/403 (46.40%), Query Frame = 1


		  
Query: 88  KKKVVMRVGYVGSNYKGLQKQQEDNIPTIEEALENALYQAGAINDTNFGNLNKIAWARSS 147
           K+KV + +GY G+ Y G+Q    ++  TIE+ L  A  +AGAI+  N  +L K  + R++
Sbjct: 98  KRKVAVMIGYCGTGYHGMQYNPPND--TIEKELFEAFVRAGAISKANSTDLKKNGFQRAA 157

Query: 148 RTDKGVHSLATMISLKMEIPDYAWMNDPNGLVLADHVNQHLPNDIRVFSILPSQRSFDPR 207
           RTDKGVH+   +ISLK+ I       DP    + + +N  LP+ IRV+ I    ++FD R
Sbjct: 158 RTDKGVHAGGNVISLKLII------EDPE---VKEKINNELPDQIRVWDISRVNKAFDCR 217

Query: 208 RECHVRNYAYLLPAEVIGITSHSST---AEIDYHIKDF-NEILNNFEGEYPYHNYT--AR 267
           + C  R Y YLLP   + I    ST    EI+   K+  N I ++ E    +  ++  A 
Sbjct: 218 KMCSSRWYEYLLPTYSL-IGPKPSTYLYNEIEASKKEIPNVIQDDVESAQFWEAFSTEAE 277

Query: 268 SKYRRRPLKGRANRRHKKSNKLPLAEVEENNDDFQSSVDDADALCDEELITDLPDDSDLD 327
           SK+ +  L+  A      +  +P    +ENN+ +Q S        + +    +  +  LD
Sbjct: 278 SKFTKEELEEIA------AFVMPKDSFDENNETYQKSKAFKKLEAEHKRAYRISKER-LD 337

Query: 328 EVFDSEDSHGDESEKKNSSVIKARWLHERDDADKLSAAHWRKIFQCSCGKLDQSLEMGFV 387
               +   +       N ++ K        D +  SA  + K    S   +    +  +V
Sbjct: 338 RFRSALKQYEGTFNFHNFTLGK--------DFNDPSAKRFMKQITVSEPFVIGEAKTEWV 397

Query: 388 ELSICGESFMLHQIRKMVGTAIAVKRGLFPRDILMLSLNKFSRIVLPIAPSEGLFL---- 447
            + I G+SFMLHQIRKM+  A  + R   P + +  +  +  +I +P AP+ GL L    
Sbjct: 398 SIKIHGQSFMLHQIRKMISMATLITRCFSPLERIRQAYGQ-EKINIPKAPALGLLLEAPV 457

Query: 448 ------RGNDFRLRKLPGNKKRPEMQTLADSEEIKKEVDKFYV 475
                 R  +F    +  +K + EM T     ++K   DK Y+
Sbjct: 458 YDGYNTRLQEFGYDPIDFSKYQSEMDTF----KMKHIYDKIYL 468

[Close]

BLAST of Spo23459.1 vs. ExPASy Swiss-Prot
Match: PUS1_YEAST (tRNA pseudouridine synthase 1 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=PUS1 PE=1 SV=1)

HSP 1 Score: 97.4 bits (241), Expect = 4.900e-19
Identity = 67/192 (34.90%), Postives = 96/192 (50.00%), Query Frame = 1


		  
Query: 31  NISIYKHKTQLNIKLL--AHYSTTSSSPSISDSTQTHEPQIQPQIHESVASPSKWESFRK 90
           N  +YK   Q  +     A +         +D      P+  P++ E+     K     K
Sbjct: 15  NEDVYKRGAQSKLTKARKADFDDEKDKKKDNDKHIDKRPKSGPRLDENGNPLPKEPRLPK 74

Query: 91  KKVVMRVGYVGSNYKGLQKQQEDNIPTIEEALENALYQAGAINDTNFGNLNKIAWARSSR 150
           +KV + VGY G+ Y G+Q    +  PTIE AL  A  +AGAI+  N  +L K  + R++R
Sbjct: 75  RKVAVMVGYCGTGYHGMQYNPPN--PTIESALFKAFVEAGAISKDNSNDLKKNGFMRAAR 134

Query: 151 TDKGVHSLATMISLKMEIPDYAWMNDPNGLVLADHVNQHLPNDIRVFSILPSQRSFDPRR 210
           TDKGVH+   +ISLKM I       DP+   +   +N+ LP  IRV+ I    ++FD R+
Sbjct: 135 TDKGVHAGGNLISLKMII------EDPD---IKQKINEKLPEGIRVWDIERVNKAFDCRK 194

Query: 211 ECHVRNYAYLLP 221
            C  R Y YLLP
Sbjct: 195 MCSSRWYEYLLP 195

[Close]

BLAST of Spo23459.1 vs. ExPASy Swiss-Prot
Match: PUS1_CANGA (tRNA pseudouridine synthase 1 OS=Candida glabrata (strain ATCC 2001 / CBS 138 / JCM 3761 / NBRC 0622 / NRRL Y-65) GN=PUS1 PE=3 SV=1)

HSP 1 Score: 95.9 bits (237), Expect = 1.400e-18
Identity = 56/133 (42.11%), Postives = 77/133 (57.89%), Query Frame = 1


		  
Query: 88  KKKVVMRVGYVGSNYKGLQKQQEDNIPTIEEALENALYQAGAINDTNFGNLNKIAWARSS 147
           K+KV + +GY G+ Y G+Q    +  PTIE AL  A   AGAI+  N  +L K  + R++
Sbjct: 86  KRKVAVMIGYCGTGYHGMQYNPPN--PTIEAALFKAFVDAGAISKANSNDLKKNNFMRAA 145

Query: 148 RTDKGVHSLATMISLKMEIPDYAWMNDPNGLVLADHVNQHLPNDIRVFSILPSQRSFDPR 207
           RTDKGVH+   +ISLKM I       DP    + D +N +LP  IR++ I    ++FD R
Sbjct: 146 RTDKGVHAGGNLISLKMII------EDPE---IMDKINANLPEGIRIWDIERVNKAFDCR 205

Query: 208 RECHVRNYAYLLP 221
           + C  R Y YLLP
Sbjct: 206 KMCSSRWYEYLLP 207

[Close]

BLAST of Spo23459.1 vs. ExPASy Swiss-Prot
Match: PUS1_YARLI (tRNA pseudouridine synthase 1 OS=Yarrowia lipolytica (strain CLIB 122 / E 150) GN=PUS1 PE=3 SV=1)

HSP 1 Score: 95.5 bits (236), Expect = 1.900e-18
Identity = 99/365 (27.12%), Postives = 166/365 (45.48%), Query Frame = 1


		  
Query: 88  KKKVVMRVGYVGSNYKGLQKQQEDNIPTIEEALENALYQAGAINDTNFGNLNKIAWARSS 147
           K+KV   +GY G+ Y G+Q        TIE  +  A  +AGAI+  N  +  K A+ R++
Sbjct: 84  KRKVACMIGYCGTGYHGMQLNPPQK--TIEGDIFQAFVKAGAISQNNADDPKKSAFMRAA 143

Query: 148 RTDKGVHSLATMISLKMEIPDYAWMNDPNGLVLADHVNQHLPNDIRVFSILPSQRSFDPR 207
           RTDKGVH+   +ISLKM I D           + + +N HLP  +RV+ +  + ++F+ R
Sbjct: 144 RTDKGVHAAGNVISLKMIIEDEN---------IVEKINSHLPEQLRVWGVSRTNKAFECR 203

Query: 208 RECHVRNYAYLLPAEVIGITSHSSTAEIDYHIKDFNEILNNFEGEYPYHNYTARSKYRRR 267
           + C  R Y YL+P     +     T   +  +KD      + EG+  + +  A       
Sbjct: 204 KLCSSRVYEYLMPTYSF-LNPRPGTVMSEKLLKDGTS--PDEEGKKYWESVAA------- 263

Query: 268 PLKGRANRRHKKSNKLPLAEVEENNDDFQSSVDDADALCDEELITDLPDDS-DLDEVFDS 327
            L+ +     +   +  + E++          ++   + + E+ TD   D+  L+++   
Sbjct: 264 DLESQGVSYDEWMKRACIDEIKG---------EETKEVAESEVKTDSKTDAATLEKIKAV 323

Query: 328 EDSHGDESEKKNSSVIKARWLHERDDADKL-------------SAAHWRKIFQCSCGKLD 387
           E  H +E       + K R + +  +                 SA    K   CS   L 
Sbjct: 324 ERRHREEFRISGERLAKIREILKIYEGTHNFHNFTLGKAFKDPSAMRTMKSLTCSDPFLI 383

Query: 388 QSLEMGFVELSICGESFMLHQIRKMVG-TAIAVKRGLFPRDILMLSLNKFSRIVLPIAPS 438
              E  +V + I G+SFMLHQIRKM+   A++V+    P+ ++  +  K +RI +P AP+
Sbjct: 384 DGTE--WVSIKIHGQSFMLHQIRKMISMVALSVRCNADPQKLIPQTFEK-ARINIPKAPA 415

[Close]

BLAST of Spo23459.1 vs. TAIR (Arabidopsis)
Match: AT2G30320.1 (Pseudouridine synthase family protein)

HSP 1 Score: 486.5 bits (1251), Expect = 2.100e-137
Identity = 248/446 (55.61%), Postives = 327/446 (73.32%), Query Frame = 1


		  
Query: 82  KWESFRKKKVVMRVGYVGSNYKGLQKQQED-NIPTIEEALENALYQAGAINDTNFGNLNK 141
           KWES+RKKKVV+R+GYVG++Y+GLQ Q++D +I TIE  LE A+Y+AG I D+N+G+L+K
Sbjct: 56  KWESYRKKKVVIRIGYVGTDYRGLQIQRDDPSIKTIEGELEVAIYKAGGIRDSNYGDLHK 115

Query: 142 IAWARSSRTDKGVHSLATMISLKMEIPDYAWMNDPNGLVLADHVNQHLPNDIRVFSILPS 201
           I WARSSRTDKGVHSLAT ISLKMEIP+ AW +DP G VLA  +++HLP +IRVFS+LPS
Sbjct: 116 IGWARSSRTDKGVHSLATSISLKMEIPETAWKDDPQGTVLAKCISKHLPENIRVFSVLPS 175

Query: 202 QRSFDPRRECHVRNYAYLLPAEVIGITSHSSTAEIDYHIKDFNEILNNFEGEYPYHNYTA 261
            R FDPRREC +R Y+YLLP +V+GI +  ++ EIDYHI DFNEIL  FEGEYP+HNYT 
Sbjct: 176 NRRFDPRRECTLRKYSYLLPVDVLGIKNSFTSDEIDYHITDFNEILKEFEGEYPFHNYTQ 235

Query: 262 RSKYRRRPLKGRANRRHKKSNKLPLAEVEENNDDFQSSVDDADALCDEELITDLPDDSDL 321
           RS+YRR     ++ ++ K+ N  P  E          S+  +++   EE   ++ ++ + 
Sbjct: 236 RSRYRR-----KSEQKIKQRNGRPPRE--------PKSIKASESEFREENHIEIGEEEEE 295

Query: 322 DEVFDSEDSHGDESEKKNSSVI-KARWLHERDDADKLSAAHWRKIFQCSCGKLDQSLEMG 381
            EV    D H    +  NS V  +A+WL+E D+ DK+S AH+RK+F+C  GKL+ SL  G
Sbjct: 296 KEVDGESDEHVVTPDSDNSQVYSRAKWLYEPDETDKISGAHFRKVFRCRSGKLENSLGFG 355

Query: 382 FVELSICGESFMLHQIRKMVGTAIAVKRGLFPRDILMLSLNKFSRIVLPIAPSEGLFLRG 441
           FVE+SI GESFMLHQIRKM+GTA+AVKR L PRDI+ LSLNKF+RIVLP+APSE L LRG
Sbjct: 356 FVEISIWGESFMLHQIRKMIGTAVAVKRELLPRDIIRLSLNKFTRIVLPLAPSEVLILRG 415

Query: 442 NDFRLRKLPGNKKRPEMQTLADSEEIKKEVDKFYVTVLVPQVSKFLDPHKSPWKEWIEIL 501
           N F +R+LP   +RP M+   +SEE++KE+++FY  V+VPQVS FLD  KSPWKEW++ L
Sbjct: 416 NSFEVRRLP---ERPGMEATGESEEVEKEIEEFYRAVMVPQVSIFLDSEKSPWKEWVDHL 475

Query: 502 DANASILESELDEVRNAWNAWNEEFP 526
           D N  +++ EL++VR  W  W    P
Sbjct: 476 DRNDGLIDEELEDVRKGWEEWKAAKP 485

[Close]

BLAST of Spo23459.1 vs. TAIR (Arabidopsis)
Match: AT1G20370.1 (Pseudouridine synthase family protein)

HSP 1 Score: 86.3 bits (212), Expect = 6.400e-17
Identity = 49/135 (36.30%), Postives = 72/135 (53.33%), Query Frame = 1


		  
Query: 86  FRKKKVVMRVGYVGSNYKGLQKQQEDNIPTIEEALENALYQAGAINDTNFGNLNKIAWAR 145
           +R++KV +   + G  Y+G+QK       TIE  LE AL+ AGA+ D +        WAR
Sbjct: 55  YRRRKVAIVFAFCGVGYQGMQKNP--GAKTIEGELEEALFHAGAVPDADRNKPRNYEWAR 114

Query: 146 SSRTDKGVHSLATMISLKMEIPDYAWMNDPNGLVLADHVNQHLPNDIRVFSILPSQRSFD 205
           S+RTDKGV ++  ++S +  +       DP G V  + +N  LP+ IRVF       SF 
Sbjct: 115 SARTDKGVSAVGQVVSGRFYV-------DPPGFV--ERLNSKLPDQIRVFGYKRVAPSFS 174

Query: 206 PRRECHVRNYAYLLP 221
            ++ C  R Y YL+P
Sbjct: 175 SKKFCDRRRYVYLIP 178

[Close]

BLAST of Spo23459.1 vs. TAIR (Arabidopsis)
Match: AT1G76120.1 (Pseudouridine synthase family protein)

HSP 1 Score: 81.6 bits (200), Expect = 1.600e-15
Identity = 53/162 (32.72%), Postives = 80/162 (49.38%), Query Frame = 1


		  
Query: 89  KKVVMRVGYVGSNYKGLQKQQEDNIPTIEEALENALYQAGAINDTNFGNLNKIAWARSSR 148
           +KV +   + G  Y+G+QK       TIE  LE AL+ AGA+ ++  G      +ARS+R
Sbjct: 22  QKVAIIFAFCGVGYQGMQKNP--GAKTIEGELEEALFHAGAVPESIRGKPKLYDFARSAR 81

Query: 149 TDKGVHSLATMISLKMEIPDYAWMNDPNGLVLADHVNQHLPNDIRVFSILPSQRSFDPRR 208
           TDKGV ++  ++S +  +       DP G V  + +N +LPN IR+F       SF  ++
Sbjct: 82  TDKGVSAVGQVVSGRFIV-------DPLGFV--NRLNSNLPNQIRIFGYKHVTPSFSSKK 141

Query: 209 ECHVRNYAYLLPAEVIGITSHSSTAEIDYHIKDFNEILNNFE 251
            C  R Y YLLP   +   SH     +   +    E +  FE
Sbjct: 142 FCDRRRYVYLLPVFALDPISHRDRETVMASLGPGEEYVKCFE 172

The following BLAST results are available for this feature:

BLAST of Spo23459.1 vs. NCBI nr
BLAST of Spo23459.1 vs. UniProtKB/TrEMBL
BLAST of Spo23459.1 vs. ExPASy Swiss-Prot
BLAST of Spo23459.1 vs. TAIR (Arabidopsis)

BLAST of Spo23459.1 vs. NCBI nr
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. NCBI nr)
Total hits: 5


Match Name	E-value	Identity	Description
gi\|902177293\|gb\|KNA08935.1\|	0.0e+0	100.	hypothetical protein SOVF_1582...	[more]
gi\|731349356\|ref\|XP_010685952.1\|	9.4e-228	76.2	PREDICTED: putative tRNA pseud...	[more]
gi\|848852283\|ref\|XP_012839130.1\|	1.5e-148	61.6	PREDICTED: putative tRNA pseud...	[more]
gi\|823143796\|ref\|XP_012471711.1\|	1.5e-148	60.2	PREDICTED: putative tRNA pseud...	[more]
gi\|590591522\|ref\|XP_007017040.1\|	9.6e-148	59.9	Pseudouridine synthase family ...	[more]

BLAST of Spo23459.1 vs. UniProtKB/TrEMBL
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. UniprotKB/TrEMBL)
Total hits: 5


Match Name	E-value	Identity	Description
A0A0K9QNW4_SPIOL	0.0e+0	100.	Uncharacterized protein OS=Spi...	[more]
A0A0J8EQX1_BETVU	6.5e-228	76.2	Uncharacterized protein OS=Bet...	[more]
A0A0D2QL35_GOSRA	1.0e-148	60.2	Uncharacterized protein OS=Gos...	[more]
A0A022S0A4_ERYGU	1.0e-148	61.6	Uncharacterized protein OS=Ery...	[more]
A0A0B0MNG3_GOSAR	1.9e-147	54.3	Uncharacterized protein OS=Gos...	[more]

BLAST of Spo23459.1 vs. ExPASy Swiss-Prot
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. ExPASy SwissProt)
Total hits: 5


Match Name	E-value	Identity	Description
PUSH_ARATH	3.8e-136	55.6	Putative tRNA pseudouridine sy...	[more]
PUS1_KLULA	4.5e-20	28.5	tRNA pseudouridine synthase 1 ...	[more]
PUS1_YEAST	4.9e-19	34.9	tRNA pseudouridine synthase 1 ...	[more]
PUS1_CANGA	1.4e-18	42.1	tRNA pseudouridine synthase 1 ...	[more]
PUS1_YARLI	1.9e-18	27.1	tRNA pseudouridine synthase 1 ...	[more]

BLAST of Spo23459.1 vs. TAIR (Arabidopsis)
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. TAIR)
Total hits: 3


Match Name	E-value	Identity	Description
AT2G30320.1	2.1e-137	55.6	Pseudouridine synthase family ...	[more]
AT1G20370.1	6.4e-17	36.3	Pseudouridine synthase family ...	[more]
AT1G76120.1	1.6e-15	32.7	Pseudouridine synthase family ...	[more]

InterPro

Analysis Name: InterPro Annotations of S. oleracea
Date Performed: 2018-06-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001406	Pseudouridine synthase I, TruA	PANTHER	PTHR11142	PSEUDOURIDYLATE SYNTHASE	coord: 357..524 score: 3.4E-184coord: 81..265 score: 3.4E
IPR020094	Pseudouridine synthase I, TruA, N-terminal	GENE3D	3.30.70.580		coord: 88..210 score: 6.5
IPR020095	Pseudouridine synthase I, TruA, C-terminal	GENE3D	3.30.70.660		coord: 360..442 score: 6.0E-26coord: 213..267 score: 6.0
IPR020097	Pseudouridine synthase I, TruA, alpha/beta domain	PFAM	PF01416	PseudoU_synth_1	coord: 361..437 score: 8.
IPR020103	Pseudouridine synthase, catalytic domain	unknown	SSF55120	Pseudouridine synthase	coord: 358..442 score: 1.44E-12coord: 88..265 score: 3.74
None	No IPR available	unknown	Coil	Coil	coord: 285..305 score: -coord: 496..516 scor
None	No IPR available	PANTHER	PTHR11142:SF9	TRNA PSEUDOURIDINE SYNTHASE	coord: 357..524 score: 3.4E-184coord: 81..265 score: 3.4E

GO Annotation

GO Assignments

This mRNA is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0001522	pseudouridine synthesis
biological_process	GO:0009451	RNA modification
molecular_function	GO:0009982	pseudouridine synthase activity
molecular_function	GO:0003723	RNA binding