Spo17257.1 (mRNA) | SpinachBase

Overview


Name	Spo17257.1
Type	mRNA
Organism	Spinacia oleracea (Spinach)
Description	Carbohydrate-binding X8 domain-containing protein (Precursor)
Location	chr1 : 3085165 .. 3088215 (-)
Sequence length	971

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDSexonthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGAGGAGAGACTAGTACTAGTGACAGTGTTGCTCATATTCCTGGTTCTACACCAGCAGCAGGTCAGGGTGGTTGAGGGTGTCTGGTGCGTGGCTCGCAGTGTAGCAACCGACGATGTGTTACAGTCAGCACTAGACTACGCCTGTGCAGGTGGTGCTGATTGTGGGCCCATTCAACAATCAGGTTTGTGTTTCCTCCCAAACACTCTACAAGCTCATGCTTCATACGCCTTTAACAGTTTCTACCAAAGGAATCATATGTCTGCTTCTTCATGTGACTTCTCTGGTACTGCCACACTTGCTCAGACAGATCCCAGTTATGGATCTTGTGTATACCCTTCTTCTCCAAGGTACCCTCTTCCTCTTCCTCTTTCTTTACTTATTCCATCCATCTTGCTTTTATCTATCTCTTTAACTAATCTACTACTATGACTCTAATCTCTTTAACTAATTTAATACCCATTAATTAATCTAAGGCATGCATGCATTCAAATTTCAAATGATGCTATTGCTTGACTCAACTAGAACATTAAATGAAACTCAACAAGAAAAGTAAATTAAAGTGATGGTCAGAATTCAGAATTCAGAAATCAGAAGCAGTGGGGGGTCAGAGAGATGTTAATTTGCAATTTGCAATTTGCAATTTGCAATTTACTCTCCCTAGGTGATTGACTGATTGGTATGTGTAGCCTTTTCGAATTGTTGTCCGTATTGGTCCGGGTCGATTCCGGGACCGGGCACCGGGTCTCGTATAGTGTAAAATTGCATCTGGTTAGCGTTAGGGATGGCAATGGGTCCAAGACCCGACCCAGATCCGGTTGGACCCGGTCCATTTTTAAGGGTCTGGGTCCAAAAAAATTAGACCCTGTGGATCTGGGGCGGATCTGGGTCTTTGTTCAATGGGGCGGGTCTGGGTCCGGGTCCAAGAATTAAAGATCCAGATCCGGTCCAGATCCGACACACAGACCCATATATATAATTTTAAAAAAATTATTAAAATTTAAATATAATTCAATCTTTGCGTGCTAAACTTTATTCAGTTCTTATGATACTAAACTATTTAAAAATTGTTTGATGTGACATATAAATAATAATATTAGAAACTTTAAATACTTATTGTATCACAAGGCTAATATGATTTTTTTTCCTAAACAAAATTAACGAATATTCCATATTTAGTGGTTTTATTAAAGCAACGTTACGTTTACATACAAAAAATGGGCGCAAAAAATTACATATTATAAGAAAAATGAGGGACAATTTTTTTTGGAAAACAAATACGCTTAGACCCATTTAGGACCCAGATCCGACCCTAAACCCATTAGACCCAGTGGATCTGGGTCTGGATCTGATTTTTTTGGACCCAACGGATCTGGGTCGGATCTGGATCCACCTCTTAAAAAGCGGGTCTGGGTCTGGATCCTGTCGGACCCGGTCCAGATCCGACCCATTGCCATCCCTAGTTAGCGTGCCGTGTTTAGCAATATTCCAGGATTCCTTTCTCTACTTTTGAGTTTTGAGTTGGTTCCTCCACACTATTTTACCATTTTCATTTTCATTTTTTTATTTTTATTTTTTATTTTTTATTTTTTATTTTTGAGTTCAACTACATTAAAATTTAAAAGTAGAGCTTGCATGACCCTGGCCTACTACATCAGTACATTGTTCCCATTTTGGAAATTCTTTTATCCCCACTTGTACCTTGAACCTTGTACCTTGTCCATTTTCCTATTTGCTTTTTATTTGGTTTCTGAGTATTTTCTGCTTCTCCTTTCAATAATGGTCGACAATAACATTTACAATTTCAATAAAAGGTTATTACTCCCATGGTTATAATGTTTTCCAATGTGCAATTTTCGTCGTCTACAAACTTGACATTAGTTTTGTTTAGTTTTGTTTTGTACGGAGTAATTAGCTTCTACTAATGTATCACCTCGTAAGTCGTAACATCATGTCTAACAAAGAAACGTAACTTAAGTTGGAATCATTCATGGGTAGAAAGTAGAAACTCAAATGAGTAAATGACTTTTTGATCAAAGAATTCTTACAATTTTTATGTCACATTATTGTTTACTAAGGTCACCCCTAGACTTGAAGCTAATCAACCTGTACATTTAATTTAACACTCCATCTGTATTTCTGGTTTATTGAATGACGCTTGAACTTAATCATAATCATTATTTGTTAATCGTGTTTCTTTGTGGAATCTCGACTTGAATTGTAGGAACACTTGTACTTACCAATTGTATATACTAGTCGTATATCTTTGTTAAATCCCTGCGTATTTTCTCAGTTGTTGTTGCCACTAATTACTTGCCGTATTTGGTTCAACCGTTTAAGTATATTGCATACCATTGCAGCTAGAACTTGATACATTTGTGTTTGTTTAGATGTCATTGAGTAAACTGATTGTTTTTGTTCAATTTTCAGTACAGCAGGAAGCATAACAGGCACAGGCACAGGCACAGGCACAGGCACAGGCACAGGCACAGGCACAGGCACAGGCACAGGCACAGGCACAGGCACAGGCAGCGCCACACCAACAACAAGCCCCTACGGAACAGCAACACCACTCACCCCCACCACCACCACCACCTCACCAACAACCTTCAGTGGTGGTAGTGGAGCAGGACTTAATCCCAATTCTATGGGCCCTCCAATTTCTACCACCAACGAATCCACAGCTCCTCCCAACTCTTCATCTCTTCTTTTCCAGACATTGCTTTTTCTTCTGTTTTCAGTTGCCTTTTATTGTACAAGATAAAACAAGCTTAATTTAGACGGACGGATAGAGAGCTCACCACAATTTTGTTCCAAGCTTGGGGGCGTTGCACTAAGAATTTGTAATGTATGTTAAATTTCACGCATGTAATTTCCTCAATGTGGAAGATGATGTAGGAGCTAAAGCTACTACATTAGTGGGTGGTTACCAATCTCGTTCTAAATATGACTATTGTAGTCTCTAGTTTGTATGCTAATTGCTTACTTAATTAGGTTTCTTGTCCCTTTATTCATTTTTTATTCTACATTACTGCTTCATTCAGAATTTAT

mRNA sequence

ATGGAGGAGAGACTAGTACTAGTGACAGTGTTGCTCATATTCCTGGTTCTACACCAGCAGCAGGTCAGGGTGGTTGAGGGTGTCTGGTGCGTGGCTCGCAGTGTAGCAACCGACGATGTGTTACAGTCAGCACTAGACTACGCCTGTGCAGGTGGTGCTGATTGTGGGCCCATTCAACAATCAGGTTTGTGTTTCCTCCCAAACACTCTACAAGCTCATGCTTCATACGCCTTTAACAGTTTCTACCAAAGGAATCATATGTCTGCTTCTTCATGTGACTTCTCTGGTACTGCCACACTTGCTCAGACAGATCCCAGTTATGGATCTTGTGTATACCCTTCTTCTCCAAGTACAGCAGGAAGCATAACAGGCACAGGCACAGGCACAGGCACAGGCACAGGCACAGGCACAGGCACAGGCACAGGCACAGGCACAGGCACAGGCACAGGCAGCGCCACACCAACAACAAGCCCCTACGGAACAGCAACACCACTCACCCCCACCACCACCACCACCTCACCAACAACCTTCAGTGGTGGTAGTGGAGCAGGACTTAATCCCAATTCTATGGGCCCTCCAATTTCTACCACCAACGAATCCACAGCTCCTCCCAACTCTTCATCTCTTCTTTTCCAGACATTGCTTTTTCTTCTGTTTTCAGTTGCCTTTTATTGTACAAGATAAAACAAGCTTAATTTAGACGGACGGATAGAGAGCTCACCACAATTTTGTTCCAAGCTTGGGGGCGTTGCACTAAGAATTTGTAATGTATGTTAAATTTCACGCATGTAATTTCCTCAATGTGGAAGATGATGTAGGAGCTAAAGCTACTACATTAGTGGGTGGTTACCAATCTCGTTCTAAATATGACTATTGTAGTCTCTAGTTTGTATGCTAATTGCTTACTTAATTAGGTTTCTTGTCCCTTTATTCATTTTTTATTCTACATTACTGCTTCATTCAGAATTTAT

Coding sequence (CDS)

ATGGAGGAGAGACTAGTACTAGTGACAGTGTTGCTCATATTCCTGGTTCTACACCAGCAGCAGGTCAGGGTGGTTGAGGGTGTCTGGTGCGTGGCTCGCAGTGTAGCAACCGACGATGTGTTACAGTCAGCACTAGACTACGCCTGTGCAGGTGGTGCTGATTGTGGGCCCATTCAACAATCAGGTTTGTGTTTCCTCCCAAACACTCTACAAGCTCATGCTTCATACGCCTTTAACAGTTTCTACCAAAGGAATCATATGTCTGCTTCTTCATGTGACTTCTCTGGTACTGCCACACTTGCTCAGACAGATCCCAGTTATGGATCTTGTGTATACCCTTCTTCTCCAAGTACAGCAGGAAGCATAACAGGCACAGGCACAGGCACAGGCACAGGCACAGGCACAGGCACAGGCACAGGCACAGGCACAGGCACAGGCACAGGCACAGGCAGCGCCACACCAACAACAAGCCCCTACGGAACAGCAACACCACTCACCCCCACCACCACCACCACCTCACCAACAACCTTCAGTGGTGGTAGTGGAGCAGGACTTAATCCCAATTCTATGGGCCCTCCAATTTCTACCACCAACGAATCCACAGCTCCTCCCAACTCTTCATCTCTTCTTTTCCAGACATTGCTTTTTCTTCTGTTTTCAGTTGCCTTTTATTGTACAAGATAA

Protein sequence

MEERLVLVTVLLIFLVLHQQQVRVVEGVWCVARSVATDDVLQSALDYACAGGADCGPIQQSGLCFLPNTLQAHASYAFNSFYQRNHMSASSCDFSGTATLAQTDPSYGSCVYPSSPSTAGSITGTGTGTGTGTGTGTGTGTGTGTGTGTGSATPTTSPYGTATPLTPTTTTTSPTTFSGGSGAGLNPNSMGPPISTTNESTAPPNSSSLLFQTLLFLLFSVAFYCTR

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
Spo17257	Spo17257	gene

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
Spo17257.1	Spo17257.1-protein	polypeptide

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Spo17257.1.CDS.2	Spo17257.1.CDS.2	CDS
Spo17257.1.CDS.1	Spo17257.1.CDS.1	CDS

The following three_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Spo17257.1.utr3p.1	Spo17257.1.utr3p.1	three_prime_UTR

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Spo17257.1.exon.2	Spo17257.1.exon.2	exon
Spo17257.1.exon.1	Spo17257.1.exon.1	exon

Homology

[Close]

BLAST of Spo17257.1 vs. NCBI nr
Match: gi|902157143|gb|KNA06096.1| (hypothetical protein SOVF_184250 [Spinacia oleracea])

HSP 1 Score: 389.8 bits (1000), Expect = 3.200e-105
Identity = 217/227 (95.59%), Postives = 217/227 (95.59%), Query Frame = 1

		  
Query: 1   MEERLVLVTVLLIFLVLHQQQVRVVEGVWCVARSVATDDVLQSALDYACAGGADCGPIQQ 60
           MEERLVLVTVLLIFLVLHQQQVRVVEGVWCVARSVATDDVLQSALDYACAGGADCGPIQQ
Sbjct: 1   MEERLVLVTVLLIFLVLHQQQVRVVEGVWCVARSVATDDVLQSALDYACAGGADCGPIQQ 60

Query: 61  SGLCFLPNTLQAHASYAFNSFYQRNHMSASSCDFSGTATLAQTDPSYGSCVYPSSPSTAG 120
           SGLCFLPNTLQAHASYAFNSFYQRNHMSASSCDFSGTATLAQTDPSYGSCVYPSSPSTAG
Sbjct: 61  SGLCFLPNTLQAHASYAFNSFYQRNHMSASSCDFSGTATLAQTDPSYGSCVYPSSPSTAG 120

Query: 121 SITGTGTGTGTGTGTGTGTGTGTGTGTGTGSATPTTSPYGTATPLTPTTTTTSPTTFSGG 180
           SI          TGTGTGTGTGTGTGTGTGSATPTTSPYGTATPLTPTTTTTSPTTFSGG
Sbjct: 121 SI----------TGTGTGTGTGTGTGTGTGSATPTTSPYGTATPLTPTTTTTSPTTFSGG 180

Query: 181 SGAGLNPNSMGPPISTTNESTAPPNSSSLLFQTLLFLLFSVAFYCTR 228
           SGAGLNPNSMGPPISTTNESTAPPNSSSLLFQTLLFLLFSVAFYCTR
Sbjct: 181 SGAGLNPNSMGPPISTTNESTAPPNSSSLLFQTLLFLLFSVAFYCTR 217

[Close]

BLAST of Spo17257.1 vs. NCBI nr
Match: gi|731325269|ref|XP_010673425.1| (PREDICTED: PLASMODESMATA CALLOSE-BINDING PROTEIN 3 [Beta vulgaris subsp. vulgaris])

HSP 1 Score: 225.3 bits (573), Expect = 1.100e-55
Identity = 139/223 (62.33%), Postives = 154/223 (69.06%), Query Frame = 1

		  
Query: 8   VTVLLIFLVLHQQQVRVVEGVWCVARSVATDDVLQSALDYACAGGADCGPIQQSGLCFLP 67
           V + L+FL + QQQV   EGVWCV+RS A+DD LQSALDYACA GADC PIQQSGLCFLP
Sbjct: 15  VKLFLLFLAV-QQQVEFGEGVWCVSRSGASDDALQSALDYACAAGADCTPIQQSGLCFLP 74

Query: 68  NTLQAHASYAFNSFYQRNHMSASSCDFSGTATLAQTDPSYGSCVYPSSPSTAGSITGTGT 127
           NTLQAHASYAFNSFYQRNHMSASSCDFS TATLAQTDPSYGSCVYP+SPSTAG IT T T
Sbjct: 75  NTLQAHASYAFNSFYQRNHMSASSCDFSATATLAQTDPSYGSCVYPASPSTAGGITSTTT 134

Query: 128 GTGTGTGTGTGTGTGTGTGTGTGSATPTTSPYGTATPLTPTTTTTSPTTFSG-------- 187
           G                        +PTT+PYGT +PLTPT  TTS ++  G        
Sbjct: 135 GN-----------------------SPTTNPYGTGSPLTPTINTTSSSSTIGGGGGGGPA 194

Query: 188 GSGAGLNPNSMGPPISTTNESTAPPNSSSLLFQTLLFLLFSVA 223
           G G G NP +MGPPI TTN+S      S+L    LLFLL S+A
Sbjct: 195 GDGTGFNPTNMGPPIPTTNDS-----GSALKSSLLLFLLLSLA 208

[Close]

BLAST of Spo17257.1 vs. NCBI nr
Match: gi|731351372|ref|XP_010687005.1| (PREDICTED: PLASMODESMATA CALLOSE-BINDING PROTEIN 3-like [Beta vulgaris subsp. vulgaris])

HSP 1 Score: 169.9 bits (429), Expect = 5.300e-39
Identity = 89/111 (80.18%), Postives = 95/111 (85.59%), Query Frame = 1

		  
Query: 6   VLVTVLLIFLVLHQQQVRVVEGVWCVARSVATDDVLQSALDYACAGGADCGPIQQSGLCF 65
           + V + L+FL L QQQV   EGVWCV+RS A+DD LQSALDYACA GADC PIQQ GL F
Sbjct: 47  LFVKLFLLFLAL-QQQVEFGEGVWCVSRSGASDDALQSALDYACAAGADCTPIQQFGLGF 106

Query: 66  LPNTLQAHASYAFNSFYQRNHMSASSCDFSGTATLAQTDPSYGSCVYPSSP 117
           LPNTLQAHASYAFNSFYQRNHMSASSCDFS TATLAQTDPSYGSC YP+SP
Sbjct: 107 LPNTLQAHASYAFNSFYQRNHMSASSCDFSTTATLAQTDPSYGSCDYPASP 156

[Close]

BLAST of Spo17257.1 vs. NCBI nr
Match: gi|728819183|gb|KHG03086.1| (hypothetical protein F383_28364 [Gossypium arboreum])

HSP 1 Score: 162.5 bits (410), Expect = 8.400e-37
Identity = 112/225 (49.78%), Postives = 133/225 (59.11%), Query Frame = 1

		  
Query: 5   LVLVTVLLIFLVLHQQQVRVVEGV-WCVARSVATDDVLQSALDYACAGGADCGPIQQSGL 64
           L  + + L FL L      V +G  WCVARS A++  LQ+ALDYACA GADC P+Q  GL
Sbjct: 3   LAALKLPLFFLSLLLTTFSVADGASWCVARSDASNQALQTALDYACASGADCTPLQSDGL 62

Query: 65  CFLPNTLQAHASYAFNSFYQRNHMSASSCDFSGTATLAQTDPSYGSCVYPSSPSTAGSIT 124
           CFLPNT+QAHASYAFNS+YQR  M+  SCDF+GTAT+A+TDPSYGSC+YPSSPSTAG   
Sbjct: 63  CFLPNTIQAHASYAFNSYYQRRAMAPGSCDFAGTATVAKTDPSYGSCMYPSSPSTAG--- 122

Query: 125 GTGTGTGTGTGTGTGTGTGTGTGTGTGSATPTTSPYGTATPLTPTTTTTSPTTFSGGSGA 184
                                     G  TPTT    T  P  PTTTTT+P   +GGS  
Sbjct: 123 --------------------------GLPTPTTPTTVTNNPTAPTTTTTAPLGGAGGSN- 182

Query: 185 GLNPNSMGPPISTTNESTAPPNS-------SSLLFQTLLFLLFSV 222
           GLN   + PP  TT+ES A  +S       S +L   L F+L SV
Sbjct: 183 GLNNPGLTPPFPTTDESRASFDSIVNTSSMSLMLLVVLSFILHSV 197

[Close]

BLAST of Spo17257.1 vs. NCBI nr
Match: gi|823249382|ref|XP_012457328.1| (PREDICTED: PLASMODESMATA CALLOSE-BINDING PROTEIN 3-like [Gossypium raimondii])

HSP 1 Score: 157.9 bits (398), Expect = 2.100e-35
Identity = 107/213 (50.23%), Postives = 126/213 (59.15%), Query Frame = 1

		  
Query: 12  LIFLVLHQQQVRVVEGV-WCVARSVATDDVLQSALDYACAGGADCGPIQQSGLCFLPNTL 71
           L FL L      V EG  WCVARS A++  LQ+ALDYACA GADC P+Q  GLCFLPNT+
Sbjct: 10  LFFLSLLLTTFSVAEGASWCVARSDASNQALQTALDYACASGADCTPLQSDGLCFLPNTI 69

Query: 72  QAHASYAFNSFYQRNHMSASSCDFSGTATLAQTDPSYGSCVYPSSPSTAGSITGTGTGTG 131
           QAHASYAFNS+YQR  ++  SCDF+GTAT+A+TDPSYGSC+YPSS STAG          
Sbjct: 70  QAHASYAFNSYYQRRAIAPGSCDFAGTATVAKTDPSYGSCMYPSSLSTAG---------- 129

Query: 132 TGTGTGTGTGTGTGTGTGTGSATPTTSPYGTATPLTPTTTTTSPTTFSGGSGAGLNPNSM 191
                              G  TPTT    T  P  PTTTTT+P   + GS  GLN   +
Sbjct: 130 -------------------GLPTPTTPTTVTNNPTAPTTTTTAPLGGADGSN-GLNNPGL 189

Query: 192 GPPISTTNESTAP----PNSSSLLFQTLLFLLF 220
            PP  TT+ES A      N+SS+    L+ L F
Sbjct: 190 TPPFPTTDESRASFDCMVNTSSMSLMLLVVLSF 192

[Close]

BLAST of Spo17257.1 vs. UniProtKB/TrEMBL
Match: A0A0K9QHM0_SPIOL (Uncharacterized protein OS=Spinacia oleracea GN=SOVF_184250 PE=4 SV=1)

HSP 1 Score: 389.8 bits (1000), Expect = 2.300e-105
Identity = 217/227 (95.59%), Postives = 217/227 (95.59%), Query Frame = 1

		  
Query: 1   MEERLVLVTVLLIFLVLHQQQVRVVEGVWCVARSVATDDVLQSALDYACAGGADCGPIQQ 60
           MEERLVLVTVLLIFLVLHQQQVRVVEGVWCVARSVATDDVLQSALDYACAGGADCGPIQQ
Sbjct: 1   MEERLVLVTVLLIFLVLHQQQVRVVEGVWCVARSVATDDVLQSALDYACAGGADCGPIQQ 60

Query: 61  SGLCFLPNTLQAHASYAFNSFYQRNHMSASSCDFSGTATLAQTDPSYGSCVYPSSPSTAG 120
           SGLCFLPNTLQAHASYAFNSFYQRNHMSASSCDFSGTATLAQTDPSYGSCVYPSSPSTAG
Sbjct: 61  SGLCFLPNTLQAHASYAFNSFYQRNHMSASSCDFSGTATLAQTDPSYGSCVYPSSPSTAG 120

Query: 121 SITGTGTGTGTGTGTGTGTGTGTGTGTGTGSATPTTSPYGTATPLTPTTTTTSPTTFSGG 180
           SI          TGTGTGTGTGTGTGTGTGSATPTTSPYGTATPLTPTTTTTSPTTFSGG
Sbjct: 121 SI----------TGTGTGTGTGTGTGTGTGSATPTTSPYGTATPLTPTTTTTSPTTFSGG 180

Query: 181 SGAGLNPNSMGPPISTTNESTAPPNSSSLLFQTLLFLLFSVAFYCTR 228
           SGAGLNPNSMGPPISTTNESTAPPNSSSLLFQTLLFLLFSVAFYCTR
Sbjct: 181 SGAGLNPNSMGPPISTTNESTAPPNSSSLLFQTLLFLLFSVAFYCTR 217

[Close]

BLAST of Spo17257.1 vs. UniProtKB/TrEMBL
Match: A0A0J8FGA6_BETVU (Uncharacterized protein OS=Beta vulgaris subsp. vulgaris GN=BVRB_3g065840 PE=4 SV=1)

HSP 1 Score: 225.3 bits (573), Expect = 7.400e-56
Identity = 139/223 (62.33%), Postives = 154/223 (69.06%), Query Frame = 1

		  
Query: 8   VTVLLIFLVLHQQQVRVVEGVWCVARSVATDDVLQSALDYACAGGADCGPIQQSGLCFLP 67
           V + L+FL + QQQV   EGVWCV+RS A+DD LQSALDYACA GADC PIQQSGLCFLP
Sbjct: 15  VKLFLLFLAV-QQQVEFGEGVWCVSRSGASDDALQSALDYACAAGADCTPIQQSGLCFLP 74

Query: 68  NTLQAHASYAFNSFYQRNHMSASSCDFSGTATLAQTDPSYGSCVYPSSPSTAGSITGTGT 127
           NTLQAHASYAFNSFYQRNHMSASSCDFS TATLAQTDPSYGSCVYP+SPSTAG IT T T
Sbjct: 75  NTLQAHASYAFNSFYQRNHMSASSCDFSATATLAQTDPSYGSCVYPASPSTAGGITSTTT 134

Query: 128 GTGTGTGTGTGTGTGTGTGTGTGSATPTTSPYGTATPLTPTTTTTSPTTFSG-------- 187
           G                        +PTT+PYGT +PLTPT  TTS ++  G        
Sbjct: 135 GN-----------------------SPTTNPYGTGSPLTPTINTTSSSSTIGGGGGGGPA 194

Query: 188 GSGAGLNPNSMGPPISTTNESTAPPNSSSLLFQTLLFLLFSVA 223
           G G G NP +MGPPI TTN+S      S+L    LLFLL S+A
Sbjct: 195 GDGTGFNPTNMGPPIPTTNDS-----GSALKSSLLLFLLLSLA 208

[Close]

BLAST of Spo17257.1 vs. UniProtKB/TrEMBL
Match: A0A0B0MVW3_GOSAR (Uncharacterized protein OS=Gossypium arboreum GN=F383_28364 PE=4 SV=1)

HSP 1 Score: 162.5 bits (410), Expect = 5.900e-37
Identity = 112/225 (49.78%), Postives = 133/225 (59.11%), Query Frame = 1

		  
Query: 5   LVLVTVLLIFLVLHQQQVRVVEGV-WCVARSVATDDVLQSALDYACAGGADCGPIQQSGL 64
           L  + + L FL L      V +G  WCVARS A++  LQ+ALDYACA GADC P+Q  GL
Sbjct: 3   LAALKLPLFFLSLLLTTFSVADGASWCVARSDASNQALQTALDYACASGADCTPLQSDGL 62

Query: 65  CFLPNTLQAHASYAFNSFYQRNHMSASSCDFSGTATLAQTDPSYGSCVYPSSPSTAGSIT 124
           CFLPNT+QAHASYAFNS+YQR  M+  SCDF+GTAT+A+TDPSYGSC+YPSSPSTAG   
Sbjct: 63  CFLPNTIQAHASYAFNSYYQRRAMAPGSCDFAGTATVAKTDPSYGSCMYPSSPSTAG--- 122

Query: 125 GTGTGTGTGTGTGTGTGTGTGTGTGTGSATPTTSPYGTATPLTPTTTTTSPTTFSGGSGA 184
                                     G  TPTT    T  P  PTTTTT+P   +GGS  
Sbjct: 123 --------------------------GLPTPTTPTTVTNNPTAPTTTTTAPLGGAGGSN- 182

Query: 185 GLNPNSMGPPISTTNESTAPPNS-------SSLLFQTLLFLLFSV 222
           GLN   + PP  TT+ES A  +S       S +L   L F+L SV
Sbjct: 183 GLNNPGLTPPFPTTDESRASFDSIVNTSSMSLMLLVVLSFILHSV 197

[Close]

BLAST of Spo17257.1 vs. UniProtKB/TrEMBL
Match: A0A0D2T8S3_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_011G156800 PE=4 SV=1)

HSP 1 Score: 157.9 bits (398), Expect = 1.400e-35
Identity = 107/213 (50.23%), Postives = 126/213 (59.15%), Query Frame = 1

		  
Query: 12  LIFLVLHQQQVRVVEGV-WCVARSVATDDVLQSALDYACAGGADCGPIQQSGLCFLPNTL 71
           L FL L      V EG  WCVARS A++  LQ+ALDYACA GADC P+Q  GLCFLPNT+
Sbjct: 120 LFFLSLLLTTFSVAEGASWCVARSDASNQALQTALDYACASGADCTPLQSDGLCFLPNTI 179

Query: 72  QAHASYAFNSFYQRNHMSASSCDFSGTATLAQTDPSYGSCVYPSSPSTAGSITGTGTGTG 131
           QAHASYAFNS+YQR  ++  SCDF+GTAT+A+TDPSYGSC+YPSS STAG          
Sbjct: 180 QAHASYAFNSYYQRRAIAPGSCDFAGTATVAKTDPSYGSCMYPSSLSTAG---------- 239

Query: 132 TGTGTGTGTGTGTGTGTGTGSATPTTSPYGTATPLTPTTTTTSPTTFSGGSGAGLNPNSM 191
                              G  TPTT    T  P  PTTTTT+P   + GS  GLN   +
Sbjct: 240 -------------------GLPTPTTPTTVTNNPTAPTTTTTAPLGGADGSN-GLNNPGL 299

Query: 192 GPPISTTNESTAP----PNSSSLLFQTLLFLLF 220
            PP  TT+ES A      N+SS+    L+ L F
Sbjct: 300 TPPFPTTDESRASFDCMVNTSSMSLMLLVVLSF 302

[Close]

BLAST of Spo17257.1 vs. UniProtKB/TrEMBL
Match: A0A103Y0M0_CYNCS (Uncharacterized protein OS=Cynara cardunculus var. scolymus GN=Ccrd_021416 PE=4 SV=1)

HSP 1 Score: 154.5 bits (389), Expect = 1.600e-34
Identity = 106/222 (47.75%), Postives = 131/222 (59.01%), Query Frame = 1

		  
Query: 3   ERLVLVTVLLIFLVLHQQQVRVVEGVWCVARSVATDDVLQSALDYACAGGADCGPIQQSG 62
           E L   T +++ +VL+    R+    WCV RS A+ + LQ+ALDYAC  GADC PIQQSG
Sbjct: 2   EILYQATAVVVLVVLYG---RITAATWCVVRSEASREELQAALDYACGAGADCAPIQQSG 61

Query: 63  LCFLPNTLQAHASYAFNSFYQRNHMSASSCDFSGTATLAQTDPSYGSCVYPSSPSTAGSI 122
           LCFLPNT+QAHASYAFNS+Y R  M+  SCDF+GTAT+A+TDPSYGSCVYP+SPSTAG  
Sbjct: 62  LCFLPNTIQAHASYAFNSYYMRKSMAPGSCDFAGTATVAKTDPSYGSCVYPASPSTAG-- 121

Query: 123 TGTGTGTGTGTGTGTGTGTGTGTGTGTGSATPT-TSPYGTATPLTPTTTTTSPTTFSGGS 182
                                GT T  G AT T ++P    TP  P TT      F G  
Sbjct: 122 ---------------------GTPTPRGGATTTFSTPITDVTPPPPATT----MPFYGSG 181

Query: 183 GAGLNPNSMGPPISTTNESTAPPN--SSSLLFQTLLFLLFSV 222
           G GLNP  M P    ++++ A      S L F  +LFL+F +
Sbjct: 182 GGGLNPIGMVPTFDASSKANALIKFYDSRLCFLHMLFLVFDL 193

[Close]

BLAST of Spo17257.1 vs. ExPASy Swiss-Prot
Match: PDCB3_ARATH (PLASMODESMATA CALLOSE-BINDING PROTEIN 3 OS=Arabidopsis thaliana GN=PDCB3 PE=1 SV=1)

HSP 1 Score: 105.5 bits (262), Expect = 7.600e-22
Identity = 76/198 (38.38%), Postives = 103/198 (52.02%), Query Frame = 1

		  
Query: 27  GVWCVARSVATDDVLQSALDYACAGGADCGPIQQSGLCFLPNTLQAHASYAFNSFYQRNH 86
           G WCV +   ++ +LQ  LDYAC  GADCGPI Q+G CF PNT+++H SYA NSF+Q+  
Sbjct: 19  GTWCVCKEGLSEAMLQKTLDYACGAGADCGPIHQTGPCFNPNTVKSHCSYAVNSFFQKKG 78

Query: 87  MSASSCDFSGTATLAQTDPSYGSCVYPSSPSTAGSITGTGTGTGTGTGTGTGTGTGTGTG 146
            S  +CDF+GTAT + +DPSY +C +P+S S                             
Sbjct: 79  QSLGTCDFAGTATFSASDPSYTTCPFPASAS----------------------------- 138

Query: 147 TGTGSATPTTSPYGTATPLTPTTT--TTSPTTFSG-GSGAGLNPNSMGPPISTTNESTAP 206
            G+G+ TP T+   T  P T  T   T +P+T  G G  +G+NP+   P      +S  P
Sbjct: 139 -GSGTTTPVTTTPSTRVPTTTNTRPYTITPSTGGGLGIPSGINPDYTDPSFGFKLQS--P 184

Query: 207 PNSSSLLFQTLL-FLLFS 221
                +LF   L F LFS
Sbjct: 199 RFGFIVLFTLFLPFYLFS 184

[Close]

BLAST of Spo17257.1 vs. ExPASy Swiss-Prot
Match: ALL9_OLEEU (Glucan endo-1,3-beta-D-glucosidase OS=Olea europaea GN=OLE9 PE=1 SV=1)

HSP 1 Score: 102.4 bits (254), Expect = 6.500e-21
Identity = 46/88 (52.27%), Postives = 60/88 (68.18%), Query Frame = 1

		  
Query: 27  GVWCVARSVATDDVLQSALDYACAGGADCGPIQQSGLCFLPNTLQAHASYAFNSFYQRNH 86
           G WCV +   +DD L   ++YAC  G DCGPIQ  G CF PNT++AHA+Y  N +YQ   
Sbjct: 370 GSWCVPKPGVSDDQLTGNINYACGQGIDCGPIQPGGACFEPNTVKAHAAYVMNLYYQSAG 429

Query: 87  MSASSCDFSGTATLAQTDPSYGSCVYPS 115
            ++ +CDFS TATL  T+PSYG+C +PS
Sbjct: 430 RNSWNCDFSQTATLTNTNPSYGACNFPS 457

[Close]

BLAST of Spo17257.1 vs. ExPASy Swiss-Prot
Match: ALL10_OLEEU (Major pollen allergen Ole e 10 OS=Olea europaea PE=1 SV=1)

HSP 1 Score: 100.5 bits (249), Expect = 2.500e-20
Identity = 48/87 (55.17%), Postives = 60/87 (68.97%), Query Frame = 1

		  
Query: 29  WCVARSVATDDVLQSALDYACA-GGADCGPIQQSGLCFLPNTLQAHASYAFNSFYQRNHM 88
           WCV ++ ATD  LQS +DY C+  G DCGPIQ +G CF PNT++AHASYA NS+YQ    
Sbjct: 37  WCVPKAEATDAQLQSNIDYVCSQSGMDCGPIQANGACFNPNTVRAHASYAMNSWYQSKGR 96

Query: 89  SASSCDFSGTATLAQTDPSYGSCVYPS 115
           +   CDFSGT  +  +DPS GSC + S
Sbjct: 97  NDFDCDFSGTGAITSSDPSNGSCSFLS 123

[Close]

BLAST of Spo17257.1 vs. ExPASy Swiss-Prot
Match: E13B_WHEAT (Glucan endo-1,3-beta-glucosidase OS=Triticum aestivum GN=GLC1 PE=2 SV=1)

HSP 1 Score: 96.7 bits (239), Expect = 3.500e-19
Identity = 46/88 (52.27%), Postives = 57/88 (64.77%), Query Frame = 1

		  
Query: 27  GVWCVARSVATDDVLQSALDYACAGGADCGPIQQSGLCFLPNTLQAHASYAFNSFYQRNH 86
           G WCVA+  A    LQ+ ++YAC G  DC PIQ  G CF PN+LQAHASY  N++YQ N 
Sbjct: 375 GKWCVAKDGANGTDLQNNINYAC-GFVDCKPIQSGGACFSPNSLQAHASYVMNAYYQANG 434

Query: 87  MSASSCDFSGTATLAQTDPSYGSCVYPS 115
            +  +CDF GT  +  +DPSYG C Y S
Sbjct: 435 HTDLACDFKGTGIVTSSDPSYGGCKYVS 461

[Close]

BLAST of Spo17257.1 vs. ExPASy Swiss-Prot
Match: E137_ARATH (Glucan endo-1,3-beta-glucosidase 7 OS=Arabidopsis thaliana GN=At4g34480 PE=1 SV=2)

HSP 1 Score: 92.4 bits (228), Expect = 6.700e-18
Identity = 49/113 (43.36%), Postives = 68/113 (60.18%), Query Frame = 1

		  
Query: 23  RVVEGVWCVARSVATDDVLQSALDYACAGGADCGPIQQSGLCFLPNTLQAHASYAFNSFY 82
           +V    WCV +  AT++ LQ++LD+AC  G DCG IQ  G CF PN + +HA+YA N ++
Sbjct: 358 KVTSSGWCVPKKGATNEELQASLDWACGHGIDCGAIQPGGACFEPNNVVSHAAYAMNMYF 417

Query: 83  QRNHMSASSCDFSGTATLAQTDPSYGSCVYPSSPSTAGSITGTGTGTGTGTGT 136
           Q++    + CDFS TAT+   +PSY +CVYP          G G G G G G+
Sbjct: 418 QKSPKQPTDCDFSKTATVTSQNPSYNNCVYPG---------GGGGGGGGGGGS 461

[Close]

BLAST of Spo17257.1 vs. TAIR (Arabidopsis)
Match: AT4G13600.1 (Carbohydrate-binding X8 domain superfamily protein)

HSP 1 Score: 128.3 bits (321), Expect = 6.200e-30
Identity = 97/214 (45.33%), Postives = 122/214 (57.01%), Query Frame = 1

		  
Query: 5   LVLVTVLLIFLVLHQQQVRVVEGVWCVARSVATDDVLQSALDYACAGGADCGPIQQSGLC 64
           L L T+  + L+L +        +WCVAR   T   LQ+ALDYACA GADC PIQ +GLC
Sbjct: 41  LCLQTLSFLLLLLFRSSA----AMWCVARFDVTSQALQAALDYACAAGADCAPIQPNGLC 100

Query: 65  FLPNTLQAHASYAFNSFYQRNHMSASSCDFSGTATLAQTDPSYGSCVYPSSPSTAGSITG 124
           FLPNT+QAHASYAFNS++QR  M+  SC+F+GT+T+A+TDPSYGSCVYP+S   AG    
Sbjct: 101 FLPNTVQAHASYAFNSYFQRAAMAPGSCNFAGTSTIAKTDPSYGSCVYPNSVRNAG---- 160

Query: 125 TGTGTGTGTGTGTGTGTGTGTGTGTGSATPTTSPYGTATPLTPTTTTTSPTTFSGGSGAG 184
                        G+ + T  G GT S T   SP  T  P  P+ TTTSP    GG   G
Sbjct: 161 -------------GSASTTTVG-GTPSTTVGNSPMTTLRP--PSGTTTSPFGIGGG---G 220

Query: 185 LNPNSMGPPISTTNESTAPPNSSSLLFQTLLFLL 219
           LNP       +T    +   N S++     + LL
Sbjct: 221 LNPQGTTTTTNTDESGSYIINKSTVSIALFVALL 227

[Close]

BLAST of Spo17257.1 vs. TAIR (Arabidopsis)
Match: AT1G18650.1 (plasmodesmata callose-binding protein 3)

HSP 1 Score: 105.5 bits (262), Expect = 4.300e-23
Identity = 76/198 (38.38%), Postives = 103/198 (52.02%), Query Frame = 1

		  
Query: 27  GVWCVARSVATDDVLQSALDYACAGGADCGPIQQSGLCFLPNTLQAHASYAFNSFYQRNH 86
           G WCV +   ++ +LQ  LDYAC  GADCGPI Q+G CF PNT+++H SYA NSF+Q+  
Sbjct: 19  GTWCVCKEGLSEAMLQKTLDYACGAGADCGPIHQTGPCFNPNTVKSHCSYAVNSFFQKKG 78

Query: 87  MSASSCDFSGTATLAQTDPSYGSCVYPSSPSTAGSITGTGTGTGTGTGTGTGTGTGTGTG 146
            S  +CDF+GTAT + +DPSY +C +P+S S                             
Sbjct: 79  QSLGTCDFAGTATFSASDPSYTTCPFPASAS----------------------------- 138

Query: 147 TGTGSATPTTSPYGTATPLTPTTT--TTSPTTFSG-GSGAGLNPNSMGPPISTTNESTAP 206
            G+G+ TP T+   T  P T  T   T +P+T  G G  +G+NP+   P      +S  P
Sbjct: 139 -GSGTTTPVTTTPSTRVPTTTNTRPYTITPSTGGGLGIPSGINPDYTDPSFGFKLQS--P 184

Query: 207 PNSSSLLFQTLL-FLLFS 221
                +LF   L F LFS
Sbjct: 199 RFGFIVLFTLFLPFYLFS 184

[Close]

BLAST of Spo17257.1 vs. TAIR (Arabidopsis)
Match: AT2G30933.1 (Carbohydrate-binding X8 domain superfamily protein)

HSP 1 Score: 97.8 bits (242), Expect = 9.000e-21
Identity = 57/105 (54.29%), Postives = 71/105 (67.62%), Query Frame = 1

		  
Query: 29  WCVARSVATDDVLQSALDYACA-GGADCGPIQQSGLCFLPNTLQAHASYAFNSFYQRNHM 88
           WCVAR       LQ+ALDYAC  GGADC  IQ+ G C+ PN+L+AHAS+AFNS+YQ+N +
Sbjct: 82  WCVARENVAKMALQAALDYACGIGGADCSEIQEGGNCYNPNSLRAHASFAFNSYYQKNPI 141

Query: 89  SASSCDFSGTATLAQTDPSYGSCVYPSSPSTAGSITGTGTGTGTG 133
             SSC+F GTA     DPS GSC +PS+ ST+ SI    +  G G
Sbjct: 142 -PSSCNFDGTAITISADPSLGSCHFPST-STSESILNVTSEDGLG 184

[Close]

BLAST of Spo17257.1 vs. TAIR (Arabidopsis)
Match: AT5G67460.1 (O-Glycosyl hydrolases family 17 protein)

HSP 1 Score: 97.4 bits (241), Expect = 1.200e-20
Identity = 44/87 (50.57%), Postives = 60/87 (68.97%), Query Frame = 1

		  
Query: 25  VEGVWCVARSVATDDVLQSALDYACA-GGADCGPIQQSGLCFLPNTLQAHASYAFNSFYQ 84
           VEG+WCVA+     + LQ +LD+AC  GGA+C  I+  G+C+ P+T+ AHASYAFNS++Q
Sbjct: 289 VEGLWCVAKPSVAAETLQQSLDFACGQGGANCDEIKPHGICYYPDTVMAHASYAFNSYWQ 348

Query: 85  RNHMSASSCDFSGTATLAQTDPSYGSC 111
           +   +  +C F GTA L  TDPSY  C
Sbjct: 349 KTKRNGGTCSFGGTAMLITTDPSYQHC 375

[Close]

BLAST of Spo17257.1 vs. TAIR (Arabidopsis)
Match: AT4G09462.1 (Carbohydrate-binding X8 domain superfamily protein)

HSP 1 Score: 96.7 bits (239), Expect = 2.000e-20
Identity = 46/105 (43.81%), Postives = 65/105 (61.90%), Query Frame = 1

		  
Query: 12  LIFLVLHQQQVRVVEG--VWCVARSVATDDVLQSALDYACAGGADCGPIQQSGLCFLPNT 71
           L+F++L    +  V     WC+A  +AT+  LQ+ +++AC+ G DC PIQ  G CF+PN 
Sbjct: 10  LLFIMLSSIMINHVASSKTWCIATLIATNAQLQANINFACSQGVDCRPIQPGGSCFIPNN 69

Query: 72  LQAHASYAFNSFYQRNHMSASSCDFSGTATLAQTDPSYGSCVYPS 115
           L  HAS+  NS+YQ +  +  +C F  T T A TDPS+G CVY S
Sbjct: 70  LANHASFVMNSYYQTHGRTNQACSFKNTGTFAATDPSFGKCVYAS 114

The following BLAST results are available for this feature:

BLAST of Spo17257.1 vs. NCBI nr
BLAST of Spo17257.1 vs. UniProtKB/TrEMBL
BLAST of Spo17257.1 vs. ExPASy Swiss-Prot
BLAST of Spo17257.1 vs. TAIR (Arabidopsis)

BLAST of Spo17257.1 vs. NCBI nr
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. NCBI nr)
Total hits: 5

Position :

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Match Name	E-value	Identity	Description
gi\|902157143\|gb\|KNA06096.1\|	3.2e-105	95.5	hypothetical protein SOVF_1842...	[more]
gi\|731325269\|ref\|XP_010673425.1\|	1.1e-55	62.3	PREDICTED: PLASMODESMATA CALLO...	[more]
gi\|731351372\|ref\|XP_010687005.1\|	5.3e-39	80.1	PREDICTED: PLASMODESMATA CALLO...	[more]
gi\|728819183\|gb\|KHG03086.1\|	8.4e-37	49.7	hypothetical protein F383_2836...	[more]
gi\|823249382\|ref\|XP_012457328.1\|	2.1e-35	50.2	PREDICTED: PLASMODESMATA CALLO...	[more]

BLAST of Spo17257.1 vs. UniProtKB/TrEMBL
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. UniprotKB/TrEMBL)
Total hits: 5

Position :

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Match Name	E-value	Identity	Description
A0A0K9QHM0_SPIOL	2.3e-105	95.5	Uncharacterized protein OS=Spi...	[more]
A0A0J8FGA6_BETVU	7.4e-56	62.3	Uncharacterized protein OS=Bet...	[more]
A0A0B0MVW3_GOSAR	5.9e-37	49.7	Uncharacterized protein OS=Gos...	[more]
A0A0D2T8S3_GOSRA	1.4e-35	50.2	Uncharacterized protein OS=Gos...	[more]
A0A103Y0M0_CYNCS	1.6e-34	47.7	Uncharacterized protein OS=Cyn...	[more]

BLAST of Spo17257.1 vs. ExPASy Swiss-Prot
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. ExPASy SwissProt)
Total hits: 5

Position :

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Match Name	E-value	Identity	Description
PDCB3_ARATH	7.6e-22	38.3	PLASMODESMATA CALLOSE-BINDING ...	[more]
ALL9_OLEEU	6.5e-21	52.2	Glucan endo-1,3-beta-D-glucosi...	[more]
ALL10_OLEEU	2.5e-20	55.1	Major pollen allergen Ole e 10...	[more]
E13B_WHEAT	3.5e-19	52.2	Glucan endo-1,3-beta-glucosida...	[more]
E137_ARATH	6.7e-18	43.3	Glucan endo-1,3-beta-glucosida...	[more]

BLAST of Spo17257.1 vs. TAIR (Arabidopsis)
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. TAIR)
Total hits: 5

Position :

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Match Name	E-value	Identity	Description
AT4G13600.1	6.2e-30	45.3	Carbohydrate-binding X8 domain...	[more]
AT1G18650.1	4.3e-23	38.3	plasmodesmata callose-binding ...	[more]
AT2G30933.1	9.0e-21	54.2	Carbohydrate-binding X8 domain...	[more]
AT5G67460.1	1.2e-20	50.5	O-Glycosyl hydrolases family 1...	[more]
AT4G09462.1	2.0e-20	43.8	Carbohydrate-binding X8 domain...	[more]

InterPro

Analysis Name: InterPro Annotations of S. oleracea
Date Performed: 2018-06-29

Position :

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IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR012946	X8 domain	PFAM	PF07983	X8	coord: 29..99 score: 1.9
IPR012946	X8 domain	SMART	SM00768	X8_cls	coord: 28..112 score: 1.4
None	No IPR available	PANTHER	PTHR32227	FAMILY NOT NAMED	coord: 22..179 score: 7.6

GO Annotation

GO Assignments

This mRNA is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008152	metabolic process
molecular_function	GO:0016787	hydrolase activity