Spo05053.1 (mRNA)

Overview
NameSpo05053.1
TypemRNA
OrganismSpinacia oleracea (Spinach)
DescriptionEthylene-responsive transcription factor
Locationchr1 : 21437728 .. 21439115 (-)
Sequence length1277
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
CTGCTTCACTTGAAAACATTTTTCACATCATTTTCTCTTGGACATTTTTACAAACATTTGGTGCGCAAGTTCTGTGCATAAGTTTCTACAGATAAGAAACGTTTCGTGTTTTCTAACCAGAATGGCAAGACCACAACAGAGGTTTCGGGGCGTTCGTCAAAGGCATTGGGGTTCGTGGGTGTCTGAAATTCGTCACCCCATTTTGTAAGTTTCTAGCTTTTCATGTTTCACTTTATCGCATTACTCACTGACGAAACGTTTCGTATGATGGTTGGATTTTTGTACTGACGAAACGTATTTTATGAAATGATTCAGGAAAACGCGTATTTGGTTGGGGACATTTGAAACGGCAGAGGATGCAGCTCGGGCCTACGATGAAGCGGCCCGACTAATGTGTGGGCCAAGGGCCCGGACCAACTTCCCTTACAACCCAAATGCTCCTCAAACTTCATCATCCAAACTACTTTCAGCTACTCTAACTGCCAAGCTTCACCGATGCTATATGGCCTCATTGCAAGTAACTAAGAACTCGGCAATGCAGGCGCAACAAAGGGGGCCCGGCCCGCAATTCTCAGGGACCGGCAATGTCGTTGGCCCTAAATTTGGGGAGACATGTGCTTGGTCCCCTGAATACGGGTCAACGGATGGACTAGTGTTACCTAATCCAGAACCTAACTGGACAATGAAGGTCGAGAATGCCCAACTTGAACCACAATGCCACTTTACTATGTTAGAAGATGATCATATTGAGCAAATGATTGAAGAGTTGCTTGATTATGGCTCAATTGAGATTGCCATTTGATTGGTGAATTTAATTACACTTGCTAAGTCGGGCTCGTTTCATTAATTAATCACTTAATTGGCATTAGTTAGTAGTCAATTACTATTATAGTGCCCGGGAAGGCACTTTTGGACCTGAATTGGGAGAGAGTTCGGCAGTTCGCAGCCAACCGGCCCATTTATATACTCCGTATTTCGTACATTCCTTTGGCCACATTTTCCATTATTTATCTAGACTTGGTTAGTTCCATAATTATCTTATTAGTGTCATTATGTACTGATTTTAACCCATTTTTATCGGTCGACATGATATATGTCACAAATATTTCCATTTTAAGTGTTTATTTTCAAATTACTTAGCTATTAGAGGTCAAAGGACTCGTATGTATAGTCATATAGTGTACTCTTAAGTACTTCGTATTACGTACTTCTTACTCCGTATATGATATATATTATTATATGTATAATAAAGAAGTGCATTGAGCACAAATTAATCCAATCTCCTTATTTTAGAATGTCGCTACTTGTACTCATTTACATCATAAGTAGTTTTAGTAAATATGAAGTATATCATTTGTAATGTCCATAATTTTACAACCACATTTGAG

mRNA sequence

CTGCTTCACTTGAAAACATTTTTCACATCATTTTCTCTTGGACATTTTTACAAACATTTGGTGCGCAAGTTCTGTGCATAAGTTTCTACAGATAAGAAACGTTTCGTGTTTTCTAACCAGAATGGCAAGACCACAACAGAGGTTTCGGGGCGTTCGTCAAAGGCATTGGGGTTCGTGGGTGTCTGAAATTCGTCACCCCATTTTGAAAACGCGTATTTGGTTGGGGACATTTGAAACGGCAGAGGATGCAGCTCGGGCCTACGATGAAGCGGCCCGACTAATGTGTGGGCCAAGGGCCCGGACCAACTTCCCTTACAACCCAAATGCTCCTCAAACTTCATCATCCAAACTACTTTCAGCTACTCTAACTGCCAAGCTTCACCGATGCTATATGGCCTCATTGCAAGTAACTAAGAACTCGGCAATGCAGGCGCAACAAAGGGGGCCCGGCCCGCAATTCTCAGGGACCGGCAATGTCGTTGGCCCTAAATTTGGGGAGACATGTGCTTGGTCCCCTGAATACGGGTCAACGGATGGACTAGTGTTACCTAATCCAGAACCTAACTGGACAATGAAGGTCGAGAATGCCCAACTTGAACCACAATGCCACTTTACTATGTTAGAAGATGATCATATTGAGCAAATGATTGAAGAGTTGCTTGATTATGGCTCAATTGAGATTGCCATTTGATTGGTGAATTTAATTACACTTGCTAAGTCGGGCTCGTTTCATTAATTAATCACTTAATTGGCATTAGTTAGTAGTCAATTACTATTATAGTGCCCGGGAAGGCACTTTTGGACCTGAATTGGGAGAGAGTTCGGCAGTTCGCAGCCAACCGGCCCATTTATATACTCCGTATTTCGTACATTCCTTTGGCCACATTTTCCATTATTTATCTAGACTTGGTTAGTTCCATAATTATCTTATTAGTGTCATTATGTACTGATTTTAACCCATTTTTATCGGTCGACATGATATATGTCACAAATATTTCCATTTTAAGTGTTTATTTTCAAATTACTTAGCTATTAGAGGTCAAAGGACTCGTATGTATAGTCATATAGTGTACTCTTAAGTACTTCGTATTACGTACTTCTTACTCCGTATATGATATATATTATTATATGTATAATAAAGAAGTGCATTGAGCACAAATTAATCCAATCTCCTTATTTTAGAATGTCGCTACTTGTACTCATTTACATCATAAGTAGTTTTAGTAAATATGAAGTATATCATTTGTAATGTCCATAATTTTACAACCACATTTGAG

Coding sequence (CDS)

ATGGCAAGACCACAACAGAGGTTTCGGGGCGTTCGTCAAAGGCATTGGGGTTCGTGGGTGTCTGAAATTCGTCACCCCATTTTGAAAACGCGTATTTGGTTGGGGACATTTGAAACGGCAGAGGATGCAGCTCGGGCCTACGATGAAGCGGCCCGACTAATGTGTGGGCCAAGGGCCCGGACCAACTTCCCTTACAACCCAAATGCTCCTCAAACTTCATCATCCAAACTACTTTCAGCTACTCTAACTGCCAAGCTTCACCGATGCTATATGGCCTCATTGCAAGTAACTAAGAACTCGGCAATGCAGGCGCAACAAAGGGGGCCCGGCCCGCAATTCTCAGGGACCGGCAATGTCGTTGGCCCTAAATTTGGGGAGACATGTGCTTGGTCCCCTGAATACGGGTCAACGGATGGACTAGTGTTACCTAATCCAGAACCTAACTGGACAATGAAGGTCGAGAATGCCCAACTTGAACCACAATGCCACTTTACTATGTTAGAAGATGATCATATTGAGCAAATGATTGAAGAGTTGCTTGATTATGGCTCAATTGAGATTGCCATTTGA

Protein sequence

MARPQQRFRGVRQRHWGSWVSEIRHPILKTRIWLGTFETAEDAARAYDEAARLMCGPRARTNFPYNPNAPQTSSSKLLSATLTAKLHRCYMASLQVTKNSAMQAQQRGPGPQFSGTGNVVGPKFGETCAWSPEYGSTDGLVLPNPEPNWTMKVENAQLEPQCHFTMLEDDHIEQMIEELLDYGSIEIAI
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameType
Spo05053Spo05053gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameType
Spo05053.1Spo05053.1-proteinpolypeptide


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameType
Spo05053.1.utr5p.1Spo05053.1.utr5p.1five_prime_UTR


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameType
Spo05053.1.CDS.2Spo05053.1.CDS.2CDS
Spo05053.1.CDS.1Spo05053.1.CDS.1CDS


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameType
Spo05053.1.utr3p.1Spo05053.1.utr3p.1three_prime_UTR


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameType
Spo05053.1.exon.2Spo05053.1.exon.2exon
Spo05053.1.exon.1Spo05053.1.exon.1exon


Homology
[Close]
BLAST of Spo05053.1 vs. NCBI nr
Match: gi|902239294|gb|KNA25548.1| (hypothetical protein SOVF_005860 [Spinacia oleracea])

HSP 1 Score: 394.4 bits (1012), Expect = 1.100e-106
Identity = 189/189 (100.00%), Postives = 189/189 (100.00%), Query Frame = 1 

		  

Query: 1   MARPQQRFRGVRQRHWGSWVSEIRHPILKTRIWLGTFETAEDAARAYDEAARLMCGPRAR 60
           MARPQQRFRGVRQRHWGSWVSEIRHPILKTRIWLGTFETAEDAARAYDEAARLMCGPRAR
Sbjct: 1   MARPQQRFRGVRQRHWGSWVSEIRHPILKTRIWLGTFETAEDAARAYDEAARLMCGPRAR 60

Query: 61  TNFPYNPNAPQTSSSKLLSATLTAKLHRCYMASLQVTKNSAMQAQQRGPGPQFSGTGNVV 120
           TNFPYNPNAPQTSSSKLLSATLTAKLHRCYMASLQVTKNSAMQAQQRGPGPQFSGTGNVV
Sbjct: 61  TNFPYNPNAPQTSSSKLLSATLTAKLHRCYMASLQVTKNSAMQAQQRGPGPQFSGTGNVV 120

Query: 121 GPKFGETCAWSPEYGSTDGLVLPNPEPNWTMKVENAQLEPQCHFTMLEDDHIEQMIEELL 180
           GPKFGETCAWSPEYGSTDGLVLPNPEPNWTMKVENAQLEPQCHFTMLEDDHIEQMIEELL
Sbjct: 121 GPKFGETCAWSPEYGSTDGLVLPNPEPNWTMKVENAQLEPQCHFTMLEDDHIEQMIEELL 180

Query: 181 DYGSIEIAI 190
           DYGSIEIAI
Sbjct: 181 DYGSIEIAI 189
[Close]
BLAST of Spo05053.1 vs. NCBI nr
Match: gi|731316807|ref|XP_010665840.1| (PREDICTED: ethylene-responsive transcription factor ERF003 [Beta vulgaris subsp. vulgaris])

HSP 1 Score: 348.2 bits (892), Expect = 9.000e-93
Identity = 165/189 (87.30%), Postives = 176/189 (93.12%), Query Frame = 1 

		  

Query: 1   MARPQQRFRGVRQRHWGSWVSEIRHPILKTRIWLGTFETAEDAARAYDEAARLMCGPRAR 60
           MARPQQR+RGVRQRHWGSWVSEIRHPILKTRIWLGTFETAEDAARAYDEAARLMCGPRAR
Sbjct: 1   MARPQQRYRGVRQRHWGSWVSEIRHPILKTRIWLGTFETAEDAARAYDEAARLMCGPRAR 60

Query: 61  TNFPYNPNAPQTSSSKLLSATLTAKLHRCYMASLQVTKNSAMQAQQRGPGPQFSGTGNVV 120
           TNFPYNPNAPQT SSKLLSATLTAKLHRCYMASLQVTKNS  QAQQ+GP PQFSG+GN +
Sbjct: 61  TNFPYNPNAPQTPSSKLLSATLTAKLHRCYMASLQVTKNSPNQAQQKGPSPQFSGSGNGI 120

Query: 121 GPKFGETCAWSPEYGSTDGLVLPNPEPNWTMKVENAQLEPQCHFTMLEDDHIEQMIEELL 180
           GPKF ET  WSPEYG T+GLV P+PEPNWTMK+ENAQLEPQ  +T LE+DHIEQMI+ELL
Sbjct: 121 GPKFRETSPWSPEYGPTNGLVFPSPEPNWTMKIENAQLEPQMQYTPLEEDHIEQMIQELL 180

Query: 181 DYGSIEIAI 190
           DYGSIEIA+
Sbjct: 181 DYGSIEIAV 189
[Close]
BLAST of Spo05053.1 vs. NCBI nr
Match: gi|225430392|ref|XP_002285373.1| (PREDICTED: protein PPLZ02 [Vitis vinifera])

HSP 1 Score: 250.8 bits (639), Expect = 2.000e-63
Identity = 131/187 (70.05%), Postives = 146/187 (78.07%), Query Frame = 1 

		  

Query: 1   MARPQQRFRGVRQRHWGSWVSEIRHPILKTRIWLGTFETAEDAARAYDEAARLMCGPRAR 60
           MARPQQR+RGVRQRHWGSWVSEIRHP+LKTRIWLGTFETAEDAARAYDEAARLMCGPRAR
Sbjct: 1   MARPQQRYRGVRQRHWGSWVSEIRHPLLKTRIWLGTFETAEDAARAYDEAARLMCGPRAR 60

Query: 61  TNFPYNPNAPQTSSSKLLSATLTAKLHRCYMASLQVTKNSAMQAQQRGPGPQFSGTGNVV 120
           TNFPYNPNA Q+SSSKLLSATLTAKLHRCYMASLQ+TK S +   Q+ P    + T ++ 
Sbjct: 61  TNFPYNPNASQSSSSKLLSATLTAKLHRCYMASLQLTKQS-LHEPQKPPTSHVATTTSIA 120

Query: 121 GPKFGETCAWSPEYGSTDGLVLPNPEPNWTMKVENAQLEPQCHFTMLEDDHIEQMIEELL 180
           G K GE+  WSPE      + +  PE NW +K        Q  F  LEDDHI+QMIEELL
Sbjct: 121 G-KVGESGQWSPE---KRPVTVQQPEANWVVKKVQVDSNTQ-QFKPLEDDHIQQMIEELL 180

Query: 181 DYGSIEI 188
           DYGSIE+
Sbjct: 181 DYGSIEL 181
[Close]
BLAST of Spo05053.1 vs. NCBI nr
Match: gi|720091847|ref|XP_010245546.1| (PREDICTED: ethylene-responsive transcription factor ERF003-like [Nelumbo nucifera])

HSP 1 Score: 247.3 bits (630), Expect = 2.200e-62
Identity = 128/187 (68.45%), Postives = 144/187 (77.01%), Query Frame = 1 

		  

Query: 1   MARPQQRFRGVRQRHWGSWVSEIRHPILKTRIWLGTFETAEDAARAYDEAARLMCGPRAR 60
           MARPQQR+RGVRQRHWGSWVSEIRHP+LKTRIWLGTFETAEDAARAYDEAARLMCGPRAR
Sbjct: 1   MARPQQRYRGVRQRHWGSWVSEIRHPLLKTRIWLGTFETAEDAARAYDEAARLMCGPRAR 60

Query: 61  TNFPYNPNAPQTSSSKLLSATLTAKLHRCYMASLQVTKNSAMQAQQRGPGPQFSGTGNVV 120
           TNFPYNPNAPQTS+SKLLSATLTAKLHRC+MASLQV  NS M+  Q+ P P       + 
Sbjct: 61  TNFPYNPNAPQTSASKLLSATLTAKLHRCHMASLQVA-NSVMKEPQKAPSPIVLSDNGIA 120

Query: 121 GPKFGETCAWSPEYGSTDGLVLPNPEPNWTMKVENAQLEPQCHFTMLEDDHIEQMIEELL 180
           G +  E   WS    S+    +  PE NW +K    Q+E    F  LEDDHIEQMI+ELL
Sbjct: 121 G-QSEEMGVWS----SSKRPAVQQPETNWVVK--KVQMEKTPQFKPLEDDHIEQMIQELL 179

Query: 181 DYGSIEI 188
           DYG++E+
Sbjct: 181 DYGTVEL 179
[Close]
BLAST of Spo05053.1 vs. NCBI nr
Match: gi|720031013|ref|XP_010265679.1| (PREDICTED: ethylene-responsive transcription factor ERF003-like [Nelumbo nucifera])

HSP 1 Score: 241.5 bits (615), Expect = 1.200e-60
Identity = 126/187 (67.38%), Postives = 144/187 (77.01%), Query Frame = 1 

		  

Query: 1   MARPQQRFRGVRQRHWGSWVSEIRHPILKTRIWLGTFETAEDAARAYDEAARLMCGPRAR 60
           MARPQQR+RGVRQRHWGSWVSEIRHP+LKTRIWLGTFETAEDAARAYDEAARLMCGPRAR
Sbjct: 1   MARPQQRYRGVRQRHWGSWVSEIRHPLLKTRIWLGTFETAEDAARAYDEAARLMCGPRAR 60

Query: 61  TNFPYNPNAPQTSSSKLLSATLTAKLHRCYMASLQVTKNSAMQAQQRGPGPQFSGTGNVV 120
           TNFPYNPNAPQ+S+SKLLSATLT KLHRC++ASLQ+T NS M+   + P P    + N +
Sbjct: 61  TNFPYNPNAPQSSASKLLSATLTEKLHRCHLASLQMT-NSMMKEPHKTPSPVVL-SNNSI 120

Query: 121 GPKFGETCAWSPEYGSTDGLVLPNPEPNWTMKVENAQLEPQCHFTMLEDDHIEQMIEELL 180
                E   WS    S+    + +PE NW +K    Q+E    F  LEDDHIEQMIEELL
Sbjct: 121 TEDSKEMGMWS----SSKRPAVQHPETNWVVK--KVQMESSQQFKPLEDDHIEQMIEELL 179

Query: 181 DYGSIEI 188
           DYGS+E+
Sbjct: 181 DYGSVEL 179
[Close]
BLAST of Spo05053.1 vs. UniProtKB/TrEMBL
Match: A0A0K9S1F4_SPIOL (Uncharacterized protein OS=Spinacia oleracea GN=SOVF_005860 PE=4 SV=1)

HSP 1 Score: 394.4 bits (1012), Expect = 7.600e-107
Identity = 189/189 (100.00%), Postives = 189/189 (100.00%), Query Frame = 1 

		  

Query: 1   MARPQQRFRGVRQRHWGSWVSEIRHPILKTRIWLGTFETAEDAARAYDEAARLMCGPRAR 60
           MARPQQRFRGVRQRHWGSWVSEIRHPILKTRIWLGTFETAEDAARAYDEAARLMCGPRAR
Sbjct: 1   MARPQQRFRGVRQRHWGSWVSEIRHPILKTRIWLGTFETAEDAARAYDEAARLMCGPRAR 60

Query: 61  TNFPYNPNAPQTSSSKLLSATLTAKLHRCYMASLQVTKNSAMQAQQRGPGPQFSGTGNVV 120
           TNFPYNPNAPQTSSSKLLSATLTAKLHRCYMASLQVTKNSAMQAQQRGPGPQFSGTGNVV
Sbjct: 61  TNFPYNPNAPQTSSSKLLSATLTAKLHRCYMASLQVTKNSAMQAQQRGPGPQFSGTGNVV 120

Query: 121 GPKFGETCAWSPEYGSTDGLVLPNPEPNWTMKVENAQLEPQCHFTMLEDDHIEQMIEELL 180
           GPKFGETCAWSPEYGSTDGLVLPNPEPNWTMKVENAQLEPQCHFTMLEDDHIEQMIEELL
Sbjct: 121 GPKFGETCAWSPEYGSTDGLVLPNPEPNWTMKVENAQLEPQCHFTMLEDDHIEQMIEELL 180

Query: 181 DYGSIEIAI 190
           DYGSIEIAI
Sbjct: 181 DYGSIEIAI 189
[Close]
BLAST of Spo05053.1 vs. UniProtKB/TrEMBL
Match: A0A0J8CZM9_BETVU (Uncharacterized protein OS=Beta vulgaris subsp. vulgaris GN=BVRB_2g031130 PE=4 SV=1)

HSP 1 Score: 348.2 bits (892), Expect = 6.300e-93
Identity = 165/189 (87.30%), Postives = 176/189 (93.12%), Query Frame = 1 

		  

Query: 1   MARPQQRFRGVRQRHWGSWVSEIRHPILKTRIWLGTFETAEDAARAYDEAARLMCGPRAR 60
           MARPQQR+RGVRQRHWGSWVSEIRHPILKTRIWLGTFETAEDAARAYDEAARLMCGPRAR
Sbjct: 1   MARPQQRYRGVRQRHWGSWVSEIRHPILKTRIWLGTFETAEDAARAYDEAARLMCGPRAR 60

Query: 61  TNFPYNPNAPQTSSSKLLSATLTAKLHRCYMASLQVTKNSAMQAQQRGPGPQFSGTGNVV 120
           TNFPYNPNAPQT SSKLLSATLTAKLHRCYMASLQVTKNS  QAQQ+GP PQFSG+GN +
Sbjct: 61  TNFPYNPNAPQTPSSKLLSATLTAKLHRCYMASLQVTKNSPNQAQQKGPSPQFSGSGNGI 120

Query: 121 GPKFGETCAWSPEYGSTDGLVLPNPEPNWTMKVENAQLEPQCHFTMLEDDHIEQMIEELL 180
           GPKF ET  WSPEYG T+GLV P+PEPNWTMK+ENAQLEPQ  +T LE+DHIEQMI+ELL
Sbjct: 121 GPKFRETSPWSPEYGPTNGLVFPSPEPNWTMKIENAQLEPQMQYTPLEEDHIEQMIQELL 180

Query: 181 DYGSIEIAI 190
           DYGSIEIA+
Sbjct: 181 DYGSIEIAV 189
[Close]
BLAST of Spo05053.1 vs. UniProtKB/TrEMBL
Match: F6H3U5_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_04s0008g06000 PE=4 SV=1)

HSP 1 Score: 250.8 bits (639), Expect = 1.400e-63
Identity = 131/187 (70.05%), Postives = 146/187 (78.07%), Query Frame = 1 

		  

Query: 1   MARPQQRFRGVRQRHWGSWVSEIRHPILKTRIWLGTFETAEDAARAYDEAARLMCGPRAR 60
           MARPQQR+RGVRQRHWGSWVSEIRHP+LKTRIWLGTFETAEDAARAYDEAARLMCGPRAR
Sbjct: 1   MARPQQRYRGVRQRHWGSWVSEIRHPLLKTRIWLGTFETAEDAARAYDEAARLMCGPRAR 60

Query: 61  TNFPYNPNAPQTSSSKLLSATLTAKLHRCYMASLQVTKNSAMQAQQRGPGPQFSGTGNVV 120
           TNFPYNPNA Q+SSSKLLSATLTAKLHRCYMASLQ+TK S +   Q+ P    + T ++ 
Sbjct: 61  TNFPYNPNASQSSSSKLLSATLTAKLHRCYMASLQLTKQS-LHEPQKPPTSHVATTTSIA 120

Query: 121 GPKFGETCAWSPEYGSTDGLVLPNPEPNWTMKVENAQLEPQCHFTMLEDDHIEQMIEELL 180
           G K GE+  WSPE      + +  PE NW +K        Q  F  LEDDHI+QMIEELL
Sbjct: 121 G-KVGESGQWSPE---KRPVTVQQPEANWVVKKVQVDSNTQ-QFKPLEDDHIQQMIEELL 180

Query: 181 DYGSIEI 188
           DYGSIE+
Sbjct: 181 DYGSIEL 181
[Close]
BLAST of Spo05053.1 vs. UniProtKB/TrEMBL
Match: A0A0D2TKI8_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_009G060600 PE=4 SV=1)

HSP 1 Score: 238.8 bits (608), Expect = 5.400e-60
Identity = 126/187 (67.38%), Postives = 142/187 (75.94%), Query Frame = 1 

		  

Query: 1   MARPQQRFRGVRQRHWGSWVSEIRHPILKTRIWLGTFETAEDAARAYDEAARLMCGPRAR 60
           MARPQQR+RGVRQRHWGSWVSEIRHP+LKTRIWLGTFETAEDAARAYDEAARLMCGPR R
Sbjct: 1   MARPQQRYRGVRQRHWGSWVSEIRHPLLKTRIWLGTFETAEDAARAYDEAARLMCGPRTR 60

Query: 61  TNFPYNPNAPQTSSSKLLSATLTAKLHRCYMASLQVTKNSAMQAQQRGPGPQFSGTGNVV 120
           TNFPY+PNAPQ+SSSKLLSATLTAKLH+CY+ASLQ+TK  ++Q  +  P      T N +
Sbjct: 61  TNFPYDPNAPQSSSSKLLSATLTAKLHKCYLASLQMTKQQSVQEPKSEPPTPHIITNNGI 120

Query: 121 GPKFGETCAWSPEYGSTDGLVLPNPEPNWTMKVENAQLEPQCHFTMLEDDHIEQMIEELL 180
             +  ET     E      L +   E NW +K   AQ+E    F  LE+DHIEQMIEELL
Sbjct: 121 ADRGSETGVRLLE---KRPLPVQETEANWVVK--KAQVERTQPFKSLEEDHIEQMIEELL 180

Query: 181 DYGSIEI 188
           DYGSIEI
Sbjct: 181 DYGSIEI 182
[Close]
BLAST of Spo05053.1 vs. UniProtKB/TrEMBL
Match: A0A061GIK0_THECC (Integrase-type DNA-binding superfamily protein OS=Theobroma cacao GN=TCM_036933 PE=4 SV=1)

HSP 1 Score: 237.7 bits (605), Expect = 1.200e-59
Identity = 125/188 (66.49%), Postives = 139/188 (73.94%), Query Frame = 1 

		  

Query: 1   MARPQQRFRGVRQRHWGSWVSEIRHPILKTRIWLGTFETAEDAARAYDEAARLMCGPRAR 60
           MARPQQR+RGVRQRHWGSWVSEIRHP+LKTRIWLGTFETAEDAARAYDEAARLMCGPRAR
Sbjct: 1   MARPQQRYRGVRQRHWGSWVSEIRHPLLKTRIWLGTFETAEDAARAYDEAARLMCGPRAR 60

Query: 61  TNFPYNPNAPQTSSSKLLSATLTAKLHRCYMASLQVTK-NSAMQAQQRGPGPQFSGTGNV 120
           TNFPYNPNAPQ+S+SKLLSATLTAKLH+CYMASLQ+TK  SA +   + P P       +
Sbjct: 61  TNFPYNPNAPQSSTSKLLSATLTAKLHKCYMASLQLTKQQSAHEPHNKAPTPHVFSNNGI 120

Query: 121 VGPKFGETCAWSPEYGSTDGLVLPNPEPNWTMKVENAQLEPQCHFTMLEDDHIEQMIEEL 180
            G   G              L     E NW +K   AQ+E    F  LE+DHI+QMIEEL
Sbjct: 121 AGRDSG----IGVRVLEKKPLQAQETEANWVVK--KAQVESPQQFKPLEEDHIQQMIEEL 180

Query: 181 LDYGSIEI 188
           LDYGSIE+
Sbjct: 181 LDYGSIEL 182
[Close]
BLAST of Spo05053.1 vs. ExPASy Swiss-Prot
Match: ERF03_ARATH (Ethylene-responsive transcription factor ERF003 OS=Arabidopsis thaliana GN=ERF003 PE=2 SV=1)

HSP 1 Score: 223.8 bits (569), Expect = 1.600e-57
Identity = 121/187 (64.71%), Postives = 134/187 (71.66%), Query Frame = 1 

		  

Query: 1   MARPQQRFRGVRQRHWGSWVSEIRHPILKTRIWLGTFETAEDAARAYDEAARLMCGPRAR 60
           MARPQQRFRGVRQRHWGSWVSEIRHP+LKTRIWLGTFETAEDAARAYDEAARLMCGPRAR
Sbjct: 1   MARPQQRFRGVRQRHWGSWVSEIRHPLLKTRIWLGTFETAEDAARAYDEAARLMCGPRAR 60

Query: 61  TNFPYNPNAPQTSSSKLLSATLTAKLHRCYMASLQVTKNSAMQAQQRGPGPQFSGTGNVV 120
           TNFPYNPNA  TSSSKLLSATLTAKLH+CYMASLQ+TK +  Q Q +    Q + +  V 
Sbjct: 61  TNFPYNPNAIPTSSSKLLSATLTAKLHKCYMASLQMTKQTQTQTQTQTARSQSADSDGVT 120

Query: 121 GPKFGETCAWSPEYGSTDGLVLPNPEPNWTMKVENAQLEPQCHFTMLEDDHIEQMIEELL 180
             +              +  V    E  W    E+     Q +F  LE+DHIEQMIEELL
Sbjct: 121 ANE-----------SHLNRGVTETTEIKW----EDGNANMQQNFRPLEEDHIEQMIEELL 172

Query: 181 DYGSIEI 188
            YGSIE+
Sbjct: 181 HYGSIEL 172
[Close]
BLAST of Spo05053.1 vs. ExPASy Swiss-Prot
Match: PZ02_LUPPO (Protein PPLZ02 OS=Lupinus polyphyllus GN=PPLZ02 PE=2 SV=1)

HSP 1 Score: 187.2 bits (474), Expect = 1.700e-46
Identity = 104/183 (56.83%), Postives = 118/183 (64.48%), Query Frame = 1 

		  

Query: 1   MARPQQRFRGVRQRHWGSWVSEIRHPILKTRIWLGTFETAEDAARAYDEAARLMCGPRAR 60
           MARPQQR+RG RQRHWGSWVSEIRH ILKTRIW GTFE+AEDAARAYDEAARLMCG RAR
Sbjct: 1   MARPQQRYRGFRQRHWGSWVSEIRHSILKTRIWQGTFESAEDAARAYDEAARLMCGTRAR 60

Query: 61  TNFPYNPNAPQTSSSKLLSATLTAKLHRCYMASLQVTKNSAMQAQQR---GPGPQFSGTG 120
           TNFPYNPNA Q+SSSKLLSATL AKLHRCYMASLQ+T+ S++    R    P     G G
Sbjct: 61  TNFPYNPNASQSSSSKLLSATLIAKLHRCYMASLQMTRPSSLPEAPRIIASPNNAVKGIG 120

Query: 121 NVVGPKFGETCAWSPEYGSTDGLVLP------NPEPNWTMKVENAQLEPQCHFTMLEDDH 175
                               D ++LP        E    +  +  ++E    F  LE+DH
Sbjct: 121 -------------------ADAMLLPKKREQEEQETGGNLDFKKVKVECSQQFKPLEEDH 164
[Close]
BLAST of Spo05053.1 vs. ExPASy Swiss-Prot
Match: WIN1_ARATH (Ethylene-responsive transcription factor WIN1 OS=Arabidopsis thaliana GN=WIN1 PE=2 SV=1)

HSP 1 Score: 115.5 bits (288), Expect = 6.100e-25
Identity = 59/101 (58.42%), Postives = 70/101 (69.31%), Query Frame = 1 

		  

Query: 6   QRFRGVRQRHWGSWVSEIRHPILKTRIWLGTFETAEDAARAYDEAARLMCGPRARTNFPY 65
           ++FRGVRQRHWGSWV+EIRHP+LK RIWLGTFETAE+AARAYDEAA LM G  A+TNFP 
Sbjct: 5   KKFRGVRQRHWGSWVAEIRHPLLKRRIWLGTFETAEEAARAYDEAAVLMSGRNAKTNFPL 64

Query: 66  NPN-----------------APQTSSSKLLSATLTAKLHRC 90
           N N                    ++SS  LS+ L+AKL +C
Sbjct: 65  NNNNTGETSEGKTDISASSTMSSSTSSSSLSSILSAKLRKC 105
[Close]
BLAST of Spo05053.1 vs. ExPASy Swiss-Prot
Match: SHN3_ARATH (Ethylene-responsive transcription factor SHINE 3 OS=Arabidopsis thaliana GN=SHN3 PE=2 SV=1)

HSP 1 Score: 103.2 bits (256), Expect = 3.200e-21
Identity = 78/192 (40.62%), Postives = 103/192 (53.65%), Query Frame = 1 

		  

Query: 6   QRFRGVRQRHWGSWVSEIRHPILKTRIWLGTFETAEDAARAYDEAARLMCGPRARTNFPY 65
           ++FRGVRQR WGSWVSEIRHP+LK R+WLGTF+TAE AARAYD+AA LM G  A+TNFP 
Sbjct: 5   KKFRGVRQRQWGSWVSEIRHPLLKRRVWLGTFDTAETAARAYDQAAVLMNGQSAKTNFPV 64

Query: 66  NPNAPQTS--------SSKLLSATLTAKLHR-C-----YMASLQVTKNSAMQAQQRGPGP 125
             +    S        S K LS  L AKL + C     Y+  L++  +S+        G 
Sbjct: 65  IKSNGSNSLEINSALRSPKSLSELLNAKLRKNCKDQTPYLTCLRLDNDSS------HIGV 124

Query: 126 QFSGTGNVVGPKFGETCAWSPEYGSTDGLVLPNPEPNWTMKVENAQLEPQCHFTMLEDDH 183
                G+   P + +      +  +  G    + E N  MKV N  ++        EDD 
Sbjct: 125 WQKRAGSKTSPNWVKLVELGDKVNARPG---GDIETN-KMKVRNEDVQ--------EDDQ 178
[Close]
BLAST of Spo05053.1 vs. ExPASy Swiss-Prot
Match: SHN2_ARATH (Ethylene-responsive transcription factor SHINE 2 OS=Arabidopsis thaliana GN=SHN2 PE=2 SV=1)

HSP 1 Score: 102.1 bits (253), Expect = 7.000e-21
Identity = 80/198 (40.40%), Postives = 107/198 (54.04%), Query Frame = 1 

		  

Query: 6   QRFRGVRQRHWGSWVSEIRHPILKTRIWLGTFETAEDAARAYDEAARLMCGPRARTNFPY 65
           ++FRGVRQR WGSWVSEIRHP+LK R+WLGTFETAE AARAYD+AA LM G  A+TNFP 
Sbjct: 5   RKFRGVRQRQWGSWVSEIRHPLLKRRVWLGTFETAEAAARAYDQAALLMNGQNAKTNFPV 64

Query: 66  -----------NPNAPQTSSSKLLSATLTAKLHRC------YMASLQV-TKNSAMQAQQR 125
                      + N+P   S K LS  L AKL +        +  L++ T +S +   Q+
Sbjct: 65  VKSEEGSDHVKDVNSP-LMSPKSLSELLNAKLRKSCKDLTPSLTCLRLDTDSSHIGVWQK 124

Query: 126 GPGPQFSGTGNVVGPKFGETCAWSP-EYGSTDGLVLPNPEPNWTMKVENAQLEPQCHFTM 183
             G + S T  V+  + G     S  + G T            TM  +N + E +    +
Sbjct: 125 RAGSKTSPTW-VMRLELGNVVNESAVDLGLT------------TMNKQNVEKEEEEEEAI 184
[Close]
BLAST of Spo05053.1 vs. TAIR (Arabidopsis)
Match: AT5G25190.1 (Integrase-type DNA-binding superfamily protein)

HSP 1 Score: 223.8 bits (569), Expect = 9.000e-59
Identity = 121/187 (64.71%), Postives = 134/187 (71.66%), Query Frame = 1 

		  

Query: 1   MARPQQRFRGVRQRHWGSWVSEIRHPILKTRIWLGTFETAEDAARAYDEAARLMCGPRAR 60
           MARPQQRFRGVRQRHWGSWVSEIRHP+LKTRIWLGTFETAEDAARAYDEAARLMCGPRAR
Sbjct: 1   MARPQQRFRGVRQRHWGSWVSEIRHPLLKTRIWLGTFETAEDAARAYDEAARLMCGPRAR 60

Query: 61  TNFPYNPNAPQTSSSKLLSATLTAKLHRCYMASLQVTKNSAMQAQQRGPGPQFSGTGNVV 120
           TNFPYNPNA  TSSSKLLSATLTAKLH+CYMASLQ+TK +  Q Q +    Q + +  V 
Sbjct: 61  TNFPYNPNAIPTSSSKLLSATLTAKLHKCYMASLQMTKQTQTQTQTQTARSQSADSDGVT 120

Query: 121 GPKFGETCAWSPEYGSTDGLVLPNPEPNWTMKVENAQLEPQCHFTMLEDDHIEQMIEELL 180
             +              +  V    E  W    E+     Q +F  LE+DHIEQMIEELL
Sbjct: 121 ANE-----------SHLNRGVTETTEIKW----EDGNANMQQNFRPLEEDHIEQMIEELL 172

Query: 181 DYGSIEI 188
            YGSIE+
Sbjct: 181 HYGSIEL 172
[Close]
BLAST of Spo05053.1 vs. TAIR (Arabidopsis)
Match: AT1G15360.1 (Integrase-type DNA-binding superfamily protein)

HSP 1 Score: 115.5 bits (288), Expect = 3.500e-26
Identity = 59/101 (58.42%), Postives = 70/101 (69.31%), Query Frame = 1 

		  

Query: 6   QRFRGVRQRHWGSWVSEIRHPILKTRIWLGTFETAEDAARAYDEAARLMCGPRARTNFPY 65
           ++FRGVRQRHWGSWV+EIRHP+LK RIWLGTFETAE+AARAYDEAA LM G  A+TNFP 
Sbjct: 5   KKFRGVRQRHWGSWVAEIRHPLLKRRIWLGTFETAEEAARAYDEAAVLMSGRNAKTNFPL 64

Query: 66  NPN-----------------APQTSSSKLLSATLTAKLHRC 90
           N N                    ++SS  LS+ L+AKL +C
Sbjct: 65  NNNNTGETSEGKTDISASSTMSSSTSSSSLSSILSAKLRKC 105
[Close]
BLAST of Spo05053.1 vs. TAIR (Arabidopsis)
Match: AT5G25390.2 (Integrase-type DNA-binding superfamily protein)

HSP 1 Score: 103.2 bits (256), Expect = 1.800e-22
Identity = 78/192 (40.62%), Postives = 103/192 (53.65%), Query Frame = 1 

		  

Query: 6   QRFRGVRQRHWGSWVSEIRHPILKTRIWLGTFETAEDAARAYDEAARLMCGPRARTNFPY 65
           ++FRGVRQR WGSWVSEIRHP+LK R+WLGTF+TAE AARAYD+AA LM G  A+TNFP 
Sbjct: 5   KKFRGVRQRQWGSWVSEIRHPLLKRRVWLGTFDTAETAARAYDQAAVLMNGQSAKTNFPV 64

Query: 66  NPNAPQTS--------SSKLLSATLTAKLHR-C-----YMASLQVTKNSAMQAQQRGPGP 125
             +    S        S K LS  L AKL + C     Y+  L++  +S+        G 
Sbjct: 65  IKSNGSNSLEINSALRSPKSLSELLNAKLRKNCKDQTPYLTCLRLDNDSS------HIGV 124

Query: 126 QFSGTGNVVGPKFGETCAWSPEYGSTDGLVLPNPEPNWTMKVENAQLEPQCHFTMLEDDH 183
                G+   P + +      +  +  G    + E N  MKV N  ++        EDD 
Sbjct: 125 WQKRAGSKTSPNWVKLVELGDKVNARPG---GDIETN-KMKVRNEDVQ--------EDDQ 178
[Close]
BLAST of Spo05053.1 vs. TAIR (Arabidopsis)
Match: AT5G11190.1 (Integrase-type DNA-binding superfamily protein)

HSP 1 Score: 102.1 bits (253), Expect = 4.000e-22
Identity = 80/198 (40.40%), Postives = 107/198 (54.04%), Query Frame = 1 

		  

Query: 6   QRFRGVRQRHWGSWVSEIRHPILKTRIWLGTFETAEDAARAYDEAARLMCGPRARTNFPY 65
           ++FRGVRQR WGSWVSEIRHP+LK R+WLGTFETAE AARAYD+AA LM G  A+TNFP 
Sbjct: 5   RKFRGVRQRQWGSWVSEIRHPLLKRRVWLGTFETAEAAARAYDQAALLMNGQNAKTNFPV 64

Query: 66  -----------NPNAPQTSSSKLLSATLTAKLHRC------YMASLQV-TKNSAMQAQQR 125
                      + N+P   S K LS  L AKL +        +  L++ T +S +   Q+
Sbjct: 65  VKSEEGSDHVKDVNSP-LMSPKSLSELLNAKLRKSCKDLTPSLTCLRLDTDSSHIGVWQK 124

Query: 126 GPGPQFSGTGNVVGPKFGETCAWSP-EYGSTDGLVLPNPEPNWTMKVENAQLEPQCHFTM 183
             G + S T  V+  + G     S  + G T            TM  +N + E +    +
Sbjct: 125 RAGSKTSPTW-VMRLELGNVVNESAVDLGLT------------TMNKQNVEKEEEEEEAI 184
[Close]
BLAST of Spo05053.1 vs. TAIR (Arabidopsis)
Match: AT5G05410.1 (DRE-binding protein 2A)

HSP 1 Score: 89.0 bits (219), Expect = 3.500e-18
Identity = 42/68 (61.76%), Postives = 51/68 (75.00%), Query Frame = 1 

		  

Query: 8   FRGVRQRHWGSWVSEIRHPILKTRIWLGTFETAEDAARAYDEAARLMCGPRARTNFPYNP 67
           FRGVRQR WG WV+EIR P   +R+WLGTF TA++AA AYDEAA+ M GP AR NFP + 
Sbjct: 79  FRGVRQRIWGKWVAEIREPNRGSRLWLGTFPTAQEAASAYDEAAKAMYGPLARLNFPRSD 138

Query: 68  NAPQTSSS 76
            +  TS+S
Sbjct: 139 ASEVTSTS 146
The following BLAST results are available for this feature:
BLAST of Spo05053.1 vs. NCBI nr
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. NCBI nr)
Total hits: 5
Match NameE-valueIdentityDescription
gi|902239294|gb|KNA25548.1|1.1e-106100.hypothetical protein SOVF_0058... [more]
gi|731316807|ref|XP_010665840.1|9.0e-9387.3PREDICTED: ethylene-responsive... [more]
gi|225430392|ref|XP_002285373.1|2.0e-6370.0PREDICTED: protein PPLZ02 [Vit... [more]
gi|720091847|ref|XP_010245546.1|2.2e-6268.4PREDICTED: ethylene-responsive... [more]
gi|720031013|ref|XP_010265679.1|1.2e-6067.3PREDICTED: ethylene-responsive... [more]
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BLAST of Spo05053.1 vs. UniProtKB/TrEMBL
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. UniprotKB/TrEMBL)
Total hits: 5
Match NameE-valueIdentityDescription
A0A0K9S1F4_SPIOL7.6e-107100.Uncharacterized protein OS=Spi... [more]
A0A0J8CZM9_BETVU6.3e-9387.3Uncharacterized protein OS=Bet... [more]
F6H3U5_VITVI1.4e-6370.0Putative uncharacterized prote... [more]
A0A0D2TKI8_GOSRA5.4e-6067.3Uncharacterized protein OS=Gos... [more]
A0A061GIK0_THECC1.2e-5966.4Integrase-type DNA-binding sup... [more]
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BLAST of Spo05053.1 vs. ExPASy Swiss-Prot
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. ExPASy SwissProt)
Total hits: 5
Match NameE-valueIdentityDescription
ERF03_ARATH1.6e-5764.7Ethylene-responsive transcript... [more]
PZ02_LUPPO1.7e-4656.8Protein PPLZ02 OS=Lupinus poly... [more]
WIN1_ARATH6.1e-2558.4Ethylene-responsive transcript... [more]
SHN3_ARATH3.2e-2140.6Ethylene-responsive transcript... [more]
SHN2_ARATH7.0e-2140.4Ethylene-responsive transcript... [more]
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BLAST of Spo05053.1 vs. TAIR (Arabidopsis)
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. TAIR)
Total hits: 5
Match NameE-valueIdentityDescription
AT5G25190.19.0e-5964.7Integrase-type DNA-binding sup... [more]
AT1G15360.13.5e-2658.4Integrase-type DNA-binding sup... [more]
AT5G25390.21.8e-2240.6Integrase-type DNA-binding sup... [more]
AT5G11190.14.0e-2240.4Integrase-type DNA-binding sup... [more]
AT5G05410.13.5e-1861.7DRE-binding protein 2A[more]
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InterPro
Analysis Name: InterPro Annotations of S. oleracea
Date Performed: 2018-06-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001471AP2/ERF domainPRINTSPR00367ETHRSPELEMNTcoord: 30..46
score: 9.9E-11coord: 8..19
score: 9.9
IPR001471AP2/ERF domainGENE3D3.30.730.10coord: 7..64
score: 1.2
IPR001471AP2/ERF domainPFAMPF00847AP2coord: 7..56
score: 2.7
IPR001471AP2/ERF domainSMARTSM00380rav1_2coord: 7..70
score: 3.1
IPR001471AP2/ERF domainPROFILEPS51032AP2_ERFcoord: 7..64
score: 20
IPR016177DNA-binding domainunknownSSF54171DNA-binding domaincoord: 7..66
score: 1.05
IPR017392AP2/ERF transcription factor ERF/PTI6PANTHERPTHR31194SHN SHINE , DNA BINDING / TRANSCRIPTION FACTORcoord: 1..189
score: 4.0E
NoneNo IPR availablePANTHERPTHR31194:SF4ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR ERF003coord: 1..189
score: 4.0E

GO Annotation
GO Assignments
This mRNA is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0006355 regulation of transcription, DNA-templated
biological_process GO:0009755 hormone-mediated signaling pathway
biological_process GO:0006351 transcription, DNA-templated
cellular_component GO:0005667 transcription factor complex
molecular_function GO:0003677 DNA binding
molecular_function GO:0003700 DNA-binding transcription factor activity