Spo24925.1 (mRNA)

Overview
NameSpo24925.1
TypemRNA
OrganismSpinacia oleracea (Spinach)
DescriptionUnknown protein
Locationchr1 : 30038077 .. 30039452 (-)
Sequence length300
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGAAGATGATCAAGCTTCTTTAACCAAACAAAAGGCCGCCGAAAGAAAGACAAGAAGGTCGAATAAGAATTCAACTCTTATTCTATCAATCATTCAATTGTAAGGGAAAAACTTTTAAGTTTTAACCATTAGAACATGCATCTCAACCCGATTCTCATTTCATTTGTAAATTGTCACAAAACTGCAACACAAATGTAAAATATTGATTCATAGGGACGAGTTACATGTTTTACGGTGGAGTAATGAGTAAACTTTGGCCGAAAAGAAAGTTAATGGTGTCGAACGAGTCTTTACCAAACCTTTTTTTGTCAAATGTTGACTTGCCATGCTAGGGAATTACCTAGGCTCAACTCTCTAGTCATGTGTCGTTCCGTAATTTCCAACATCTTATCGTGTTCATCATGTTGTTTCACGTAGTATCATGTCTCATACCAGCTTGGTTAGTGATATTTTTAACTACCCCTAGTAGTTGGACGTATCTCGAGGTTAGACGACAAACCAACTCAAATTAGCAAAAATCCAATTTGATCTCAATCTCACCTTGCTAATATTTTAGATTAGCAAATCCTCTATCTAAATTTCCAATAATCCATCACCATCTAACCAAATTTTAGTTATCTTGTTATGCTCCATCATGTTCTTTCACGTAATGATATGCATTAGACGAACCTGGCTCCTAACGAGGAATTCTTAGCCTCAAGTGATTTGTGTCCACACATATATAAGTGGGTACCAATACAAAATATGTTAGTGCCCATTACACAAAATGACTTGTATTTCTTAACAATTATGTATTTTTTGTACTGACATATTATGTGTTGATACTTAAGAAGGTTGTATTTGGATCGCTTGGCTCCATATCATAAGCCACTGTAGGTTTAGAAATCATCGCCCCTAACAACTTTCACTGTCACTAATCACTATTAGTAATACTAATATAAAAACGAGTCGACATATATCGAGGTAAGAAAGAACGACAAACCAACTCAAATTAGCAAAAATCCAATTAATCTCAATCTTACCTCACCAATATCGTTGATTAGTATATCTCCCATTCTCCCCCCTTTTAAATTTCCATTAATCCATCACCATCTAACAAACCAAACCACCCTTCCCCACATCGATCAAATACTACAAAAAAAATACAATTCCAACTTTAGAAAATAAAAAATCAGGAACACCCCCAACTGTCGTCCGAGGGAGCCGTTGAAACCTCCTACTTTCTCTCTCTCTCTCTCTCTCCTCATCTCCATTCTCCCCCCTTTCAACTGTTTGTTGCTTAACGTTTCCTCCTTCTTTCTCCCCTCTTCATTACGCTTTCTCTCTCCTCTTTCTATTAAACATTTAAACCCCTCCACCCCTAAAATTAATTAA

mRNA sequence

ATGGAAGATGATCAAGCTTCTTTAACCAAACAAAAGGCCGCCGAAAGAAAGACAAGAAGGTCGAATAAGAATTCAACTCTTATTCTATCAATCATTCAATTGAACACCCCCAACTGTCGTCCGAGGGAGCCGTTGAAACCTCCTACTTTCTCTCTCTCTCTCTCTCTCCTCATCTCCATTCTCCCCCCTTTCAACTGTTTGTTGCTTAACGTTTCCTCCTTCTTTCTCCCCTCTTCATTACGCTTTCTCTCTCCTCTTTCTATTAAACATTTAAACCCCTCCACCCCTAAAATTAATTAA

Coding sequence (CDS)

ATGGAAGATGATCAAGCTTCTTTAACCAAACAAAAGGCCGCCGAAAGAAAGACAAGAAGGTCGAATAAGAATTCAACTCTTATTCTATCAATCATTCAATTGAACACCCCCAACTGTCGTCCGAGGGAGCCGTTGAAACCTCCTACTTTCTCTCTCTCTCTCTCTCTCCTCATCTCCATTCTCCCCCCTTTCAACTGTTTGTTGCTTAACGTTTCCTCCTTCTTTCTCCCCTCTTCATTACGCTTTCTCTCTCCTCTTTCTATTAAACATTTAAACCCCTCCACCCCTAAAATTAATTAA

Protein sequence

MEDDQASLTKQKAAERKTRRSNKNSTLILSIIQLNTPNCRPREPLKPPTFSLSLSLLISILPPFNCLLLNVSSFFLPSSLRFLSPLSIKHLNPSTPKIN
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameType
Spo24925Spo24925gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameType
Spo24925.1Spo24925.1-proteinpolypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameType
Spo24925.1.CDS.2Spo24925.1.CDS.2CDS
Spo24925.1.CDS.1Spo24925.1.CDS.1CDS


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameType
Spo24925.1.exon.2Spo24925.1.exon.2exon
Spo24925.1.exon.1Spo24925.1.exon.1exon


Homology
The following BLAST results are available for this feature:
BLAST of Spo24925.1 vs. NCBI nr
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. NCBI nr)
Total hits: 0
Match NameE-valueIdentityDescription
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BLAST of Spo24925.1 vs. UniProtKB/TrEMBL
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. UniprotKB/TrEMBL)
Total hits: 0
Match NameE-valueIdentityDescription
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BLAST of Spo24925.1 vs. ExPASy Swiss-Prot
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. ExPASy SwissProt)
Total hits: 0
Match NameE-valueIdentityDescription
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BLAST of Spo24925.1 vs. TAIR (Arabidopsis)
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. TAIR)
Total hits: 0
Match NameE-valueIdentityDescription
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