Spo00200.1 (mRNA) | SpinachBase

Overview


Name	Spo00200.1
Type	mRNA
Organism	Spinacia oleracea (Spinach)
Description	Albugo candida WGS project CAIX00000000 data, strain Ac Nc2, contig AcNc2_CONTIG_58_length_100122
Location	chr1 : 30734629 .. 30739931 (-)
Sequence length	1301

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

CTTGTAAACGTTTGAAACTAAAATACGAAATTGAAGATTCAAAGAATTTAACAGAGAATTAGCCAACTAGGCTAGGCTTCTTGAGAAGTTGGTACATGACGCGGTTTGTAACAGGTCAAATTCAACAAATAAACAAACTTCTCTCTATTTTATCCTTTTATTTAATTGCAAATTAATTTGATTCAACCACTGTCTTTCTTTGTTTGTTTCTTGCAGATTAATCAAATTCAAATTCAAAAAAACTGAAACGTAATTGGGCTTTCTGGCTTTGACCTTTTCCACCCAAATTTCCACCAAATACAAAGAAAAAATAAAGTAAAATTCATAGCTTTCTTGCTAAAATTTGAAGTTTTAGTTTTAGAGAGAGAATGATGAATCCGAATTGGGGGCTGAGGGGTTGCTGTAATCGTGATCAAAAGACTTTCATGATCACCATTGGCATCTTCACTGTTGTTATTCTTGCGGTTTGTTTTCTTTAATTTTCTTTATCATCTTTCTATTCTGCATTTTTACGCAACTTTTGAATCTTGGGTACTTATTTTATCAGTAATGTATTTGCTGGGTTGATTTTATCTGTATTATTGGTTACCAAGATTCCAACTTCACTAACTAGTGTAATTAACTAATTATCCACTTCTAATTACTCTAGTTTTGGTCTGTTGGGGGTTCCCAGATGTGCTATGTAAAGTTTTCATCAGTAATTTTACTAATTGAAGTTTGATGTAAACTTAAATAAAGTATTCTGAGTTTTGAAAATACCTAATTTGTGGGCGTTCAATTGTTTCTACATAGACAAATTGTATGAGTGATAAGATACCATGTTTGGATTATCCAATATGTAATTGAAACCTATTTGGAAATAATGTTGTTGCTTGGTAGTGTTAGATACTCAGTTTACTGTCAGAAATTTTCATAGTTTAGTATGTGCCTTAACCATTTCATTTGGTGCCATGGATTAGGGTTTCTCTTAATGAAAGTGTTTCCGGGGTTAGAAAGCTATAGTGCGGGCATTCTTTGCTAATGATATCGTTAACCGTACCACTAGGTTATTCTTGTAGCTACAAGCCTAGGAAAGTAGGATGATTCCTAAATCACTAAAGTTCGGCATTGCAACATGCTTAAGTTGAAGAGTTGAACTGCATGGAGATTTTCCGTATAGGACAGTTTAATTGCTTGAATATTTTGTATCTTTCTTATTCATTCTTGTATGATCTTATTGTACTTGGCTTATTAGTTGCATACTGGCAGACTTGCTTGACTAATTAGCTGATTGATAACTTTTCTTGTTTGATTGGCAGTTATGGAGGACATTTTTGCTGACACCGTTTAAGCTTATTACCGTCTTTCTTCATGAAGTCAGTCATGCTATAGCATGTTTACTTACATGCGGTTCGGTAAGATACTTCTTGCCTTCTTTTTGCAACTTTCTTCACCAGTTTTGTTGAGCTATAGAGAGTATAACTTGTGGCACTTAGTTAACCCCTGTGGTGCCTCCTTAAATATTATCCCTTGTGGTATGGAATGTGCAAGTGGTATATGGATTTTCAAGAGGGGTTAATTGGATGAAAAGATTTATTCATGAAATTTTCAAATTGTTCATCAGATTAACCATATATCATTATATAATTTGGATTACAAAGGACTAAGTCATCAAAAGTTGTTTCCCTTCAATCGGTTCATTAGGCCAAGTTCATGAAATAGATCAGGACTTCAGGAGTGTCCTTGGAACAACCGAAGTGCAAAAACTGAAACTGTGGCAAATAAATTTTTTAAGTTGTACACGGGACACCTCCCCTCCCCCCTATTTCTTGGTCTTATAAACTTCTCTCAAAAAGAAAGACTAATACTCTACACACTTAAATGCCTCTATATCAAGTTAAAGGCATTTGTCTGAACTCTAGACAACAAGCAGACTGTGATCTATTTTAAAAGTGGCTTTAGGAAGTCCCTTGGCTCTCTAGCTTACCTACGCAGATCTTGGAAAATCTCATAGTACGAGTAGATCATGTGAAGTTAAAATATGCAATTCAGTGATGAGCAATTGAGCACAACTCCCAAGGAAATATGGTATGTCAGCATTAGAAATGATATAACAAGAGACGGAGCAGTATGCATATTTTAAGAAAAATTGTTAGTTAAACCTGCTTATGGGCATTTATTTGTGAAAGAGGCCTTGGGTGATTAGGAGAGGATATTGGGTGGAAAGTGCATCTCAAACATACTGGAATACGGCAAACAGAAATTGAGACATTTATTTGTGGATCAGCGGGTGTTGTTACTAAGTGTATTACATGGCATAAGTCAACTTGTCAAGTACTTCTCTAATTTAATTCTACTCTTACTCAACGTGAAGTATTAGCCGAGTCAATCGTCTTTCAGATCAAGATTCCAGTAGAAATAATTTCATTGGGAACAGTAGCCCAGTAGGGTAAGGCGACAGCCTACAAGTTACAGAGTAATTTTTTCAGGTATATAGGTAAAGATGTCTGCCTCATTAGATATTTTGAGACATTGTATTTCAGAGTGATCATATGTTAAGGTTCTCTTGTAAAGATTTCCATTCATCTGCAGATCATCTGCTGTTCTGCTTAAACTGTAGTATATTCGATTCAATAATTACTATTTTGGGCCATGACATTTTAAACTCACATGATACTGTGCTATGAATAATTATCATGGAAAAGGGCACGTTAGATGGTAGAGTTATGGTTAACTTGTTTTGTTAGTAGCTTGAAGAATAAGTTAGAGTTTATTAGAGGAAGAAGTCCTATAAATAGAGCATATTAGAGAGAGGGTTATGTTAAATATTGTGGAAAGTCAGTATCAAGTCTAGTTTGGGAGAGTGTCATTCCCCTCGGAGAGTGTCATTCCTCTCGAAAGATTGGCTAGGTTGTAATCGGTGATTTCCACCGTGATAATCTTCAGCACAATTATATCATTACTTGTCCTTCCTTATTCATCCTTCTTCCTCGAATCTCCCTTTTCTGTCCATAATCTTACTGATTTAGTCGGTATCTATGCTAATACATAGCATACTGCACCTGTCTTTGTGCTTGAAGCTTAGATTTTAACTTGCAGCCCTCACAATTAACAGACAGTTTCTTATTGGAGTCTGATGCGGATAAAATTTTGCTTCTTTACATTTTTCTATAGTTTCCAATTTTATATTACAATTCCATGTTACTCGGAGAATCTAAACCTGAAAAATTAGCGATCAAAGATACAGTGACTCGCTTTATGATTAATGATTATGGTTACTTGTTCTGTAATGCTATTCTAGGTGGAGGGAATTGAGGTTCATGCAAACGAGGGAGGTTTGACAAGAACACGCGGTGGTGCTTATTGGCTGATCTTACCTGCAGGATGTAATACTCTGCCTAATGCTTTTATTGAACTCCATGTAATTTTATGTTTTCTGTTTAATGATCAATCTGGGAACTCTTGATTTCATGTCATGATTCAAATTCACCTTTTACTTTTAGTTCTACTTATTTTCAACTTATACGCTTAGGGCACTCACATCTTTAATGCATCTTTCTGATTTAGATCTTGGCTCTTCATTCTGGGGAATGCTTTTGGTACTTGCCTCCACAAATCTCATGACAGCAAGAATCGCTGCTGGCTGTCTCGGAGTAGCTCTGCTTGTCGTGCTATTCATTGCAAAAAATGTAACAAGGATTTTATGCTTTTACTTTATAATAGTACCATCTTTTCGCTCCATTTTTTTACTCAAAAAAGTTCTGACGTTCTGTATAATTGCTTGGTAACAAACAGTGGACGCTTCGAGGACTTTGCATTGGTGAGTACCACTATATATTTACTTATCCTCATCCAATCTTTCTACTGATTTTAAGTTGTAATAATTTACATTACACTTAATGATGACAATACAGGTTTCATTATTTTTATTGGTGTAATTTGGGTGTTGCAAGAAAAGACGGAAGTACGTATCCTTCGGTATGTCATTCTTTTTATTGGTATGTGCTTACAACCCATCTTTCCTTTCGACAATACATATATACGTGTTAGTTGGCACTATCTTTTATAAAATATTGAAGAGAGATTTTGAAGCAGTTCTAAAAGCATGTCTCGTTTTTTGCAGGGGTGATGAATAGTCTGTTCTCAGTTTATGGTATATTTTATTATCCTTTTTCAAAAATCTCTATTTGCAAGGCTTTCAGTTTGAATATTCTGACTTTTATGTTGTGATGTGATGCAGATATCTACGATGATTTAATATCTCGAAGAGTTAACTCAAGTGATGCTGAGAAATTTGCTGAGGTTTGCCCTTGCCCATGCAATGGGATGGCTTGGGGGTTCATTTGGTGAGTTTTTGGAAAGAAATTATAAAAAATACAATAAAAAAACAAGTACACACCCTCTTTGTTTTGTTAGTTTTGACACTTTTTTCTTGAAAATTCTGTTGCAGGGGAATGATATCCTTTGTATTTCTATGCGGAGCCATGTATTTGGGGCTTGTCATCCTGTCATGAGTAACAATGCTTCTCTGAGCATATTTTCCAAGGTATATTTTACTATTTGTGGGTTTTGAACGATGGTTAATACCACCACCTTTGGTGAGCAGATAATGGCGGTAATGGTAGTACATTTGTGTGTGATTCTGTGTGAAAAATTCTATACAATGTCTATGGAAATGCAAGTTTAATTTCGCATTGGTAGTTTTTTTACCCATGAATTTCCATTATCATCACTCCTTACCAATTGAGAAGTGGCATTTAATGGTAATGGAAATCTACGGATAAAAACTCATACTTTTGGACGGAGCTGCATTACCATAGTTTTAACTGTGAGACTTTTCTTACAGAAATAACACATTACAATTACCATCAGTTGTGTCCACCAATCAAAGTGGTTGTTAAAGCATGTACTTTCTTAAGATGTATTATACGTTTGTAGCTTACTTAGTGTTCACAGAATGGTTCTGTTGTCCCTTGTTTTCGCAGGACTTAGCACTGAGTGTCTAGTATCAGCTGACATGATGGATGAACAGAATTTCTTTATTCTTTCGCAGTAATTCTTGCTGTCTACATACAAAGGGTGGCTTGTACATTTAGACAGGATGAATCCATTGTTATAGTATTACTGACTGAGGAAAACAATGTATTAACACATTTATTTCTACTATATGGTAATTGATTAAGATGTTTCTGATGCAATGGTGTTAGTGTTACACATTGGCAGTAGAAGTTTTTCTTGTGAATCTAATGATTATTGCTGGATATATTGTTAATCTGAAACACAACAGCATAAATTGACAAATGTTTGCAAAATTGAAAAGAAAT

mRNA sequence

CTTGTAAACGTTTGAAACTAAAATACGAAATTGAAGATTCAAAGAATTTAACAGAGAATTAGCCAACTAGGCTAGGCTTCTTGAGAAGTTGGTACATGACGCGGTTTGTAACAGATTAATCAAATTCAAATTCAAAAAAACTGAAACGTAATTGGGCTTTCTGGCTTTGACCTTTTCCACCCAAATTTCCACCAAATACAAAGAAAAAATAAAGTAAAATTCATAGCTTTCTTGCTAAAATTTGAAGTTTTAGTTTTAGAGAGAGAATGATGAATCCGAATTGGGGGCTGAGGGGTTGCTGTAATCGTGATCAAAAGACTTTCATGATCACCATTGGCATCTTCACTGTTGTTATTCTTGCGTTATGGAGGACATTTTTGCTGACACCGTTTAAGCTTATTACCGTCTTTCTTCATGAAGTCAGTCATGCTATAGCATGTTTACTTACATGCGGTTCGGTGGAGGGAATTGAGGTTCATGCAAACGAGGGAGGTTTGACAAGAACACGCGGTGGTGCTTATTGGCTGATCTTACCTGCAGGATATCTTGGCTCTTCATTCTGGGGAATGCTTTTGGTACTTGCCTCCACAAATCTCATGACAGCAAGAATCGCTGCTGGCTGTCTCGGAGTAGCTCTGCTTGTCGTGCTATTCATTGCAAAAAATTGGACGCTTCGAGGACTTTGCATTGGTTTCATTATTTTTATTGGTGTAATTTGGGTGTTGCAAGAAAAGACGGAAGTACGTATCCTTCGGTATGTCATTCTTTTTATTGGGGTGATGAATAGTCTGTTCTCAGTTTATGATATCTACGATGATTTAATATCTCGAAGAGTTAACTCAAGTGATGCTGAGAAATTTGCTGAGGGGAATGATATCCTTTGTATTTCTATGCGGAGCCATGTATTTGGGGCTTGTCATCCTGTCATGAGTAACAATGCTTCTCTGAGCATATTTTCCAAGGACTTAGCACTGAGTGTCTAGTATCAGCTGACATGATGGATGAACAGAATTTCTTTATTCTTTCGCAGTAATTCTTGCTGTCTACATACAAAGGGTGGCTTGTACATTTAGACAGGATGAATCCATTGTTATAGTATTACTGACTGAGGAAAACAATGTATTAACACATTTATTTCTACTATATGGTAATTGATTAAGATGTTTCTGATGCAATGGTGTTAGTGTTACACATTGGCAGTAGAAGTTTTTCTTGTGAATCTAATGATTATTGCTGGATATATTGTTAATCTGAAACACAACAGCATAAATTGACAAATGTTTGCAAAATTGAAAAGAAAT

Coding sequence (CDS)

ATGATGAATCCGAATTGGGGGCTGAGGGGTTGCTGTAATCGTGATCAAAAGACTTTCATGATCACCATTGGCATCTTCACTGTTGTTATTCTTGCGTTATGGAGGACATTTTTGCTGACACCGTTTAAGCTTATTACCGTCTTTCTTCATGAAGTCAGTCATGCTATAGCATGTTTACTTACATGCGGTTCGGTGGAGGGAATTGAGGTTCATGCAAACGAGGGAGGTTTGACAAGAACACGCGGTGGTGCTTATTGGCTGATCTTACCTGCAGGATATCTTGGCTCTTCATTCTGGGGAATGCTTTTGGTACTTGCCTCCACAAATCTCATGACAGCAAGAATCGCTGCTGGCTGTCTCGGAGTAGCTCTGCTTGTCGTGCTATTCATTGCAAAAAATTGGACGCTTCGAGGACTTTGCATTGGTTTCATTATTTTTATTGGTGTAATTTGGGTGTTGCAAGAAAAGACGGAAGTACGTATCCTTCGGTATGTCATTCTTTTTATTGGGGTGATGAATAGTCTGTTCTCAGTTTATGATATCTACGATGATTTAATATCTCGAAGAGTTAACTCAAGTGATGCTGAGAAATTTGCTGAGGGGAATGATATCCTTTGTATTTCTATGCGGAGCCATGTATTTGGGGCTTGTCATCCTGTCATGAGTAACAATGCTTCTCTGAGCATATTTTCCAAGGACTTAGCACTGAGTGTCTAG

Protein sequence

MMNPNWGLRGCCNRDQKTFMITIGIFTVVILALWRTFLLTPFKLITVFLHEVSHAIACLLTCGSVEGIEVHANEGGLTRTRGGAYWLILPAGYLGSSFWGMLLVLASTNLMTARIAAGCLGVALLVVLFIAKNWTLRGLCIGFIIFIGVIWVLQEKTEVRILRYVILFIGVMNSLFSVYDIYDDLISRRVNSSDAEKFAEGNDILCISMRSHVFGACHPVMSNNASLSIFSKDLALSV

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
Spo00200	Spo00200	gene

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
Spo00200.1	Spo00200.1-protein	polypeptide

The following five_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Spo00200.1.utr5p.2	Spo00200.1.utr5p.2	five_prime_UTR
Spo00200.1.utr5p.1	Spo00200.1.utr5p.1	five_prime_UTR

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Spo00200.1.CDS.10	Spo00200.1.CDS.10	CDS
Spo00200.1.CDS.9	Spo00200.1.CDS.9	CDS
Spo00200.1.CDS.8	Spo00200.1.CDS.8	CDS
Spo00200.1.CDS.7	Spo00200.1.CDS.7	CDS
Spo00200.1.CDS.6	Spo00200.1.CDS.6	CDS
Spo00200.1.CDS.5	Spo00200.1.CDS.5	CDS
Spo00200.1.CDS.4	Spo00200.1.CDS.4	CDS
Spo00200.1.CDS.3	Spo00200.1.CDS.3	CDS
Spo00200.1.CDS.2	Spo00200.1.CDS.2	CDS
Spo00200.1.CDS.1	Spo00200.1.CDS.1	CDS

The following three_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Spo00200.1.utr3p.1	Spo00200.1.utr3p.1	three_prime_UTR

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Spo00200.1.exon.11	Spo00200.1.exon.11	exon
Spo00200.1.exon.10	Spo00200.1.exon.10	exon
Spo00200.1.exon.9	Spo00200.1.exon.9	exon
Spo00200.1.exon.8	Spo00200.1.exon.8	exon
Spo00200.1.exon.7	Spo00200.1.exon.7	exon
Spo00200.1.exon.6	Spo00200.1.exon.6	exon
Spo00200.1.exon.5	Spo00200.1.exon.5	exon
Spo00200.1.exon.4	Spo00200.1.exon.4	exon
Spo00200.1.exon.3	Spo00200.1.exon.3	exon
Spo00200.1.exon.2	Spo00200.1.exon.2	exon
Spo00200.1.exon.1	Spo00200.1.exon.1	exon

Homology

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BLAST of Spo00200.1 vs. NCBI nr
Match: gi|902240081|gb|KNA25864.1| (hypothetical protein SOVF_001710 [Spinacia oleracea])

HSP 1 Score: 392.9 bits (1008), Expect = 4.000e-106
Identity = 200/200 (100.00%), Postives = 200/200 (100.00%), Query Frame = 1

		  
Query: 1   MMNPNWGLRGCCNRDQKTFMITIGIFTVVILALWRTFLLTPFKLITVFLHEVSHAIACLL 60
           MMNPNWGLRGCCNRDQKTFMITIGIFTVVILALWRTFLLTPFKLITVFLHEVSHAIACLL
Sbjct: 1   MMNPNWGLRGCCNRDQKTFMITIGIFTVVILALWRTFLLTPFKLITVFLHEVSHAIACLL 60

Query: 61  TCGSVEGIEVHANEGGLTRTRGGAYWLILPAGYLGSSFWGMLLVLASTNLMTARIAAGCL 120
           TCGSVEGIEVHANEGGLTRTRGGAYWLILPAGYLGSSFWGMLLVLASTNLMTARIAAGCL
Sbjct: 61  TCGSVEGIEVHANEGGLTRTRGGAYWLILPAGYLGSSFWGMLLVLASTNLMTARIAAGCL 120

Query: 121 GVALLVVLFIAKNWTLRGLCIGFIIFIGVIWVLQEKTEVRILRYVILFIGVMNSLFSVYD 180
           GVALLVVLFIAKNWTLRGLCIGFIIFIGVIWVLQEKTEVRILRYVILFIGVMNSLFSVYD
Sbjct: 121 GVALLVVLFIAKNWTLRGLCIGFIIFIGVIWVLQEKTEVRILRYVILFIGVMNSLFSVYD 180

Query: 181 IYDDLISRRVNSSDAEKFAE 201
           IYDDLISRRVNSSDAEKFAE
Sbjct: 181 IYDDLISRRVNSSDAEKFAE 200

[Close]

BLAST of Spo00200.1 vs. NCBI nr
Match: gi|731315852|ref|XP_010693206.1| (PREDICTED: uncharacterized protein LOC104906184 [Beta vulgaris subsp. vulgaris])

HSP 1 Score: 367.1 bits (941), Expect = 2.400e-98
Identity = 183/199 (91.96%), Postives = 193/199 (96.98%), Query Frame = 1

		  
Query: 2   MNPNWGLRGCCNRDQKTFMITIGIFTVVILALWRTFLLTPFKLITVFLHEVSHAIACLLT 61
           MNPNW L+GCCN DQ+ F+ITI IFTVVILALWRTFLLTPFKLITVFLHEVSHAIAC+LT
Sbjct: 1   MNPNWELKGCCNHDQRLFIITIAIFTVVILALWRTFLLTPFKLITVFLHEVSHAIACILT 60

Query: 62  CGSVEGIEVHANEGGLTRTRGGAYWLILPAGYLGSSFWGMLLVLASTNLMTARIAAGCLG 121
           CGSVEGIEVH NEGGLT+TRGGAYWLILPAGYLGSSFWGMLLVLASTNL+TARIAAGCLG
Sbjct: 61  CGSVEGIEVHGNEGGLTKTRGGAYWLILPAGYLGSSFWGMLLVLASTNLITARIAAGCLG 120

Query: 122 VALLVVLFIAKNWTLRGLCIGFIIFIGVIWVLQEKTEVRILRYVILFIGVMNSLFSVYDI 181
           VALLVVLFIA+NWTLRGLCIGFI+F+ VIW+LQEKTEVRILRYVILFIGVMNSLFSVYDI
Sbjct: 121 VALLVVLFIAQNWTLRGLCIGFIVFLAVIWILQEKTEVRILRYVILFIGVMNSLFSVYDI 180

Query: 182 YDDLISRRVNSSDAEKFAE 201
           YDDLISRRVNSSDAEKFAE
Sbjct: 181 YDDLISRRVNSSDAEKFAE 199

[Close]

BLAST of Spo00200.1 vs. NCBI nr
Match: gi|449441740|ref|XP_004138640.1| (PREDICTED: uncharacterized protein LOC101216469 [Cucumis sativus])

HSP 1 Score: 347.1 bits (889), Expect = 2.500e-92
Identity = 169/197 (85.79%), Postives = 186/197 (94.42%), Query Frame = 1

		  
Query: 4   PNWGLRGCCNRDQKTFMITIGIFTVVILALWRTFLLTPFKLITVFLHEVSHAIACLLTCG 63
           PNW LR CC+RDQ  F++TIG+FT+VILALWRTF++TPFKLITVFLHE SHAIAC LTCG
Sbjct: 2   PNWELRNCCHRDQVLFLVTIGVFTLVILALWRTFIITPFKLITVFLHEASHAIACKLTCG 61

Query: 64  SVEGIEVHANEGGLTRTRGGAYWLILPAGYLGSSFWGMLLVLASTNLMTARIAAGCLGVA 123
            VEGI+VHANEGG+T+TRGGAYWLILPAGYLGSSFWGM ++LASTNL+TARIAAGCLG+A
Sbjct: 62  EVEGIQVHANEGGVTQTRGGAYWLILPAGYLGSSFWGMAMILASTNLLTARIAAGCLGLA 121

Query: 124 LLVVLFIAKNWTLRGLCIGFIIFIGVIWVLQEKTEVRILRYVILFIGVMNSLFSVYDIYD 183
           LLVVLFIAKNWTLRGLC+GFIIF+ V+WVLQE T VRILRYVILFIGVMNSLFSVYDIYD
Sbjct: 122 LLVVLFIAKNWTLRGLCVGFIIFLAVVWVLQETTTVRILRYVILFIGVMNSLFSVYDIYD 181

Query: 184 DLISRRVNSSDAEKFAE 201
           DLISRRVNSSDAEKFAE
Sbjct: 182 DLISRRVNSSDAEKFAE 198

[Close]

BLAST of Spo00200.1 vs. NCBI nr
Match: gi|659081289|ref|XP_008441253.1| (PREDICTED: uncharacterized protein LOC103485439 [Cucumis melo])

HSP 1 Score: 346.7 bits (888), Expect = 3.300e-92
Identity = 169/197 (85.79%), Postives = 185/197 (93.91%), Query Frame = 1

		  
Query: 4   PNWGLRGCCNRDQKTFMITIGIFTVVILALWRTFLLTPFKLITVFLHEVSHAIACLLTCG 63
           PNW LR CC+ DQ  F++TIG+FTVVILALWRTF++TPFKLITVFLHE SHAIAC LTCG
Sbjct: 2   PNWELRNCCHHDQVVFLVTIGVFTVVILALWRTFIITPFKLITVFLHEASHAIACKLTCG 61

Query: 64  SVEGIEVHANEGGLTRTRGGAYWLILPAGYLGSSFWGMLLVLASTNLMTARIAAGCLGVA 123
            VEGI+VHANEGG+T+TRGGAYWLILPAGYLGSSFWGM ++LASTNL+TARIAAGCLG+A
Sbjct: 62  EVEGIQVHANEGGVTQTRGGAYWLILPAGYLGSSFWGMAMILASTNLLTARIAAGCLGLA 121

Query: 124 LLVVLFIAKNWTLRGLCIGFIIFIGVIWVLQEKTEVRILRYVILFIGVMNSLFSVYDIYD 183
           LLVVLFIAKNWTLRGLC+GFIIF+ V+WVLQE T VRILRYVILFIGVMNSLFSVYDIYD
Sbjct: 122 LLVVLFIAKNWTLRGLCVGFIIFLAVVWVLQETTTVRILRYVILFIGVMNSLFSVYDIYD 181

Query: 184 DLISRRVNSSDAEKFAE 201
           DLISRRVNSSDAEKFAE
Sbjct: 182 DLISRRVNSSDAEKFAE 198

[Close]

BLAST of Spo00200.1 vs. NCBI nr
Match: gi|698506780|ref|XP_009798757.1| (PREDICTED: uncharacterized protein LOC104244932 [Nicotiana sylvestris])

HSP 1 Score: 346.7 bits (888), Expect = 3.300e-92
Identity = 172/199 (86.43%), Postives = 185/199 (92.96%), Query Frame = 1

		  
Query: 2   MNPNWGLRGCCNRDQKTFMITIGIFTVVILALWRTFLLTPFKLITVFLHEVSHAIACLLT 61
           MNPNW LR CCNRDQK F+ITIG+FTVVIL LWRTFLLTPFKLITVFLHE SHAIAC LT
Sbjct: 1   MNPNWELRDCCNRDQKIFLITIGVFTVVILVLWRTFLLTPFKLITVFLHEASHAIACKLT 60

Query: 62  CGSVEGIEVHANEGGLTRTRGGAYWLILPAGYLGSSFWGMLLVLASTNLMTARIAAGCLG 121
           CG VEG++VHANEGG+T+TRGG YWLILPAGYLGSSFWGM+L+LASTNL+TA+IAAGC  
Sbjct: 61  CGQVEGMQVHANEGGVTQTRGGVYWLILPAGYLGSSFWGMVLILASTNLLTAKIAAGCFI 120

Query: 122 VALLVVLFIAKNWTLRGLCIGFIIFIGVIWVLQEKTEVRILRYVILFIGVMNSLFSVYDI 181
            AL +VLFIAKNWTLRGLCIGFIIFI VIWVLQE T+VRILRYVILFIGVMNSLFSVYDI
Sbjct: 121 AALFIVLFIAKNWTLRGLCIGFIIFIAVIWVLQELTKVRILRYVILFIGVMNSLFSVYDI 180

Query: 182 YDDLISRRVNSSDAEKFAE 201
           YDDLISRRV+SSDAEKFAE
Sbjct: 181 YDDLISRRVHSSDAEKFAE 199

[Close]

BLAST of Spo00200.1 vs. UniProtKB/TrEMBL
Match: A0A0K9S3P8_SPIOL (Uncharacterized protein OS=Spinacia oleracea GN=SOVF_001710 PE=4 SV=1)

HSP 1 Score: 392.9 bits (1008), Expect = 2.800e-106
Identity = 200/200 (100.00%), Postives = 200/200 (100.00%), Query Frame = 1

		  
Query: 1   MMNPNWGLRGCCNRDQKTFMITIGIFTVVILALWRTFLLTPFKLITVFLHEVSHAIACLL 60
           MMNPNWGLRGCCNRDQKTFMITIGIFTVVILALWRTFLLTPFKLITVFLHEVSHAIACLL
Sbjct: 1   MMNPNWGLRGCCNRDQKTFMITIGIFTVVILALWRTFLLTPFKLITVFLHEVSHAIACLL 60

Query: 61  TCGSVEGIEVHANEGGLTRTRGGAYWLILPAGYLGSSFWGMLLVLASTNLMTARIAAGCL 120
           TCGSVEGIEVHANEGGLTRTRGGAYWLILPAGYLGSSFWGMLLVLASTNLMTARIAAGCL
Sbjct: 61  TCGSVEGIEVHANEGGLTRTRGGAYWLILPAGYLGSSFWGMLLVLASTNLMTARIAAGCL 120

Query: 121 GVALLVVLFIAKNWTLRGLCIGFIIFIGVIWVLQEKTEVRILRYVILFIGVMNSLFSVYD 180
           GVALLVVLFIAKNWTLRGLCIGFIIFIGVIWVLQEKTEVRILRYVILFIGVMNSLFSVYD
Sbjct: 121 GVALLVVLFIAKNWTLRGLCIGFIIFIGVIWVLQEKTEVRILRYVILFIGVMNSLFSVYD 180

Query: 181 IYDDLISRRVNSSDAEKFAE 201
           IYDDLISRRVNSSDAEKFAE
Sbjct: 181 IYDDLISRRVNSSDAEKFAE 200

[Close]

BLAST of Spo00200.1 vs. UniProtKB/TrEMBL
Match: K4BFU6_SOLLC (Uncharacterized protein OS=Solanum lycopersicum PE=4 SV=1)

HSP 1 Score: 351.7 bits (901), Expect = 7.100e-94
Identity = 180/236 (76.27%), Postives = 196/236 (83.05%), Query Frame = 1

		  
Query: 2   MNPNWGLRGCCNRDQKTFMITIGIFTVVILALWRTFLLTPFKLITVFLHEVSHAIACLLT 61
           MNPNW L+ CCNRDQK F++TIG+FTV IL LWRTFLLTPFKLITVFLHE SHAIAC LT
Sbjct: 1   MNPNWELQNCCNRDQKLFLVTIGVFTVAILVLWRTFLLTPFKLITVFLHEASHAIACKLT 60

Query: 62  CGSVEGIEVHANEGGLTRTRGGAYWLILPAGYLGSSFWGMLLVLASTNLMTARIAAGCLG 121
           CG VEG++VHANEGG+T+TRGG YWLILPAGYLGSSFWGM+L+LASTNL+TA+IAAGC  
Sbjct: 61  CGQVEGMKVHANEGGVTQTRGGVYWLILPAGYLGSSFWGMVLILASTNLLTAKIAAGCFI 120

Query: 122 VALLVVLFIAKNWTLRGLCIGFIIFIGVIWVLQEKTEVRILRYVILFIGVMNSLFSVYDI 181
            ALL+VLFIAKNWTLRGLCIGFIIFI  IWVLQE T VRILRYVILFIGVMNSLFSVYDI
Sbjct: 121 AALLIVLFIAKNWTLRGLCIGFIIFIAAIWVLQELTTVRILRYVILFIGVMNSLFSVYDI 180

Query: 182 YDDLISRRVNSSDAEKFAE----------------GNDILCISMRSHVFGACHPVM 222
           YDDLISRRVNSSDAEKFAE                G+DI  IS+ S V   CH +M
Sbjct: 181 YDDLISRRVNSSDAEKFAELCPCPCNGVGWGIIWLGDDIFYISLWSDVPWTCHSLM 236

[Close]

BLAST of Spo00200.1 vs. UniProtKB/TrEMBL
Match: A0A0A0LQR0_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_2G404790 PE=4 SV=1)

HSP 1 Score: 347.1 bits (889), Expect = 1.800e-92
Identity = 169/197 (85.79%), Postives = 186/197 (94.42%), Query Frame = 1

		  
Query: 4   PNWGLRGCCNRDQKTFMITIGIFTVVILALWRTFLLTPFKLITVFLHEVSHAIACLLTCG 63
           PNW LR CC+RDQ  F++TIG+FT+VILALWRTF++TPFKLITVFLHE SHAIAC LTCG
Sbjct: 2   PNWELRNCCHRDQVLFLVTIGVFTLVILALWRTFIITPFKLITVFLHEASHAIACKLTCG 61

Query: 64  SVEGIEVHANEGGLTRTRGGAYWLILPAGYLGSSFWGMLLVLASTNLMTARIAAGCLGVA 123
            VEGI+VHANEGG+T+TRGGAYWLILPAGYLGSSFWGM ++LASTNL+TARIAAGCLG+A
Sbjct: 62  EVEGIQVHANEGGVTQTRGGAYWLILPAGYLGSSFWGMAMILASTNLLTARIAAGCLGLA 121

Query: 124 LLVVLFIAKNWTLRGLCIGFIIFIGVIWVLQEKTEVRILRYVILFIGVMNSLFSVYDIYD 183
           LLVVLFIAKNWTLRGLC+GFIIF+ V+WVLQE T VRILRYVILFIGVMNSLFSVYDIYD
Sbjct: 122 LLVVLFIAKNWTLRGLCVGFIIFLAVVWVLQETTTVRILRYVILFIGVMNSLFSVYDIYD 181

Query: 184 DLISRRVNSSDAEKFAE 201
           DLISRRVNSSDAEKFAE
Sbjct: 182 DLISRRVNSSDAEKFAE 198

[Close]

BLAST of Spo00200.1 vs. UniProtKB/TrEMBL
Match: A0A0V0I0I7_SOLCH (Putative ovule protein OS=Solanum chacoense PE=4 SV=1)

HSP 1 Score: 344.7 bits (883), Expect = 8.700e-92
Identity = 170/199 (85.43%), Postives = 184/199 (92.46%), Query Frame = 1

		  
Query: 2   MNPNWGLRGCCNRDQKTFMITIGIFTVVILALWRTFLLTPFKLITVFLHEVSHAIACLLT 61
           MNPNW L+ CCNRDQK F++TIG+FTV IL LWRTFLLTPFKLITVFLHE SHAIAC LT
Sbjct: 1   MNPNWELQNCCNRDQKLFLVTIGVFTVAILVLWRTFLLTPFKLITVFLHEASHAIACKLT 60

Query: 62  CGSVEGIEVHANEGGLTRTRGGAYWLILPAGYLGSSFWGMLLVLASTNLMTARIAAGCLG 121
           CG VEG++VHANEGG+T+TRGG YWLILPAGYLGSSFWGM+L+LASTNL+TA+IAAGC  
Sbjct: 61  CGQVEGMQVHANEGGVTQTRGGVYWLILPAGYLGSSFWGMVLILASTNLLTAKIAAGCFI 120

Query: 122 VALLVVLFIAKNWTLRGLCIGFIIFIGVIWVLQEKTEVRILRYVILFIGVMNSLFSVYDI 181
            ALL+VLFIA+NWTLRGLCIGFIIFI VIWVLQE T VRILRYVILFIGVMNSLFSVYDI
Sbjct: 121 AALLIVLFIAQNWTLRGLCIGFIIFIAVIWVLQELTTVRILRYVILFIGVMNSLFSVYDI 180

Query: 182 YDDLISRRVNSSDAEKFAE 201
           YDDLISRRVNSSDAEKFAE
Sbjct: 181 YDDLISRRVNSSDAEKFAE 199

[Close]

BLAST of Spo00200.1 vs. UniProtKB/TrEMBL
Match: M1BQ86_SOLTU (Uncharacterized protein OS=Solanum tuberosum GN=PGSC0003DMG403019589 PE=4 SV=1)

HSP 1 Score: 343.6 bits (880), Expect = 1.900e-91
Identity = 169/199 (84.92%), Postives = 184/199 (92.46%), Query Frame = 1

		  
Query: 2   MNPNWGLRGCCNRDQKTFMITIGIFTVVILALWRTFLLTPFKLITVFLHEVSHAIACLLT 61
           MNPNW L+ CCNRDQK F++TIG+FTV IL LWRTFLLTPFKLITVFLHE SHAIAC LT
Sbjct: 1   MNPNWELQNCCNRDQKLFLVTIGVFTVAILVLWRTFLLTPFKLITVFLHEASHAIACKLT 60

Query: 62  CGSVEGIEVHANEGGLTRTRGGAYWLILPAGYLGSSFWGMLLVLASTNLMTARIAAGCLG 121
           CG VEG++VHANEGG+T+TRGG YWLILPAGYLGSSFWGM+L+LASTNL+TA+IAAGC  
Sbjct: 61  CGQVEGMQVHANEGGVTQTRGGVYWLILPAGYLGSSFWGMVLILASTNLLTAKIAAGCFI 120

Query: 122 VALLVVLFIAKNWTLRGLCIGFIIFIGVIWVLQEKTEVRILRYVILFIGVMNSLFSVYDI 181
            ALL+VLFIA+NWTLRGLCIGFIIFI VIWVLQ+ T VRILRYVILFIGVMNSLFSVYDI
Sbjct: 121 AALLIVLFIAQNWTLRGLCIGFIIFIAVIWVLQQLTTVRILRYVILFIGVMNSLFSVYDI 180

Query: 182 YDDLISRRVNSSDAEKFAE 201
           YDDLISRRVNSSDAEKFAE
Sbjct: 181 YDDLISRRVNSSDAEKFAE 199

[Close]

BLAST of Spo00200.1 vs. TAIR (Arabidopsis)
Match: AT1G67060.1 (unknown protein)

HSP 1 Score: 336.3 bits (861), Expect = 1.600e-92
Identity = 168/200 (84.00%), Postives = 183/200 (91.50%), Query Frame = 1

		  
Query: 1   MMNPNWGLRGCCNRDQKTFMITIGIFTVVILALWRTFLLTPFKLITVFLHEVSHAIACLL 60
           M +PNW LRGCCNR+Q TF+ITIG+FTVVIL LWRTFLLTPFKLITVFLHE SHA+AC L
Sbjct: 1   MDSPNWELRGCCNRNQNTFLITIGVFTVVILLLWRTFLLTPFKLITVFLHEASHAVACKL 60

Query: 61  TCGSVEGIEVHANEGGLTRTRGGAYWLILPAGYLGSSFWGMLLVLASTNLMTARIAAGCL 120
           TCG VEG+EV+ANEGG T TRGG YWLILPAGYLGSSFWGM L+LASTNL+TARIAA  L
Sbjct: 61  TCGDVEGMEVNANEGGSTTTRGGIYWLILPAGYLGSSFWGMALILASTNLLTARIAAAGL 120

Query: 121 GVALLVVLFIAKNWTLRGLCIGFIIFIGVIWVLQEKTEVRILRYVILFIGVMNSLFSVYD 180
           G+AL +VLFIAKNWTLRGLCIGFI+F+ VIWVLQE T V+ILRYVILFIGVMNSLFSVYD
Sbjct: 121 GLALFIVLFIAKNWTLRGLCIGFIVFLAVIWVLQELTTVKILRYVILFIGVMNSLFSVYD 180

Query: 181 IYDDLISRRVNSSDAEKFAE 201
           IYDDLISRRV+SSDAEKFAE
Sbjct: 181 IYDDLISRRVHSSDAEKFAE 200

The following BLAST results are available for this feature:

BLAST of Spo00200.1 vs. NCBI nr
BLAST of Spo00200.1 vs. UniProtKB/TrEMBL
BLAST of Spo00200.1 vs. ExPASy Swiss-Prot
BLAST of Spo00200.1 vs. TAIR (Arabidopsis)

BLAST of Spo00200.1 vs. NCBI nr
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. NCBI nr)
Total hits: 5

Position :

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Match Name	E-value	Identity	Description
gi\|902240081\|gb\|KNA25864.1\|	4.0e-106	100.	hypothetical protein SOVF_0017...	[more]
gi\|731315852\|ref\|XP_010693206.1\|	2.4e-98	91.9	PREDICTED: uncharacterized pro...	[more]
gi\|449441740\|ref\|XP_004138640.1\|	2.5e-92	85.7	PREDICTED: uncharacterized pro...	[more]
gi\|659081289\|ref\|XP_008441253.1\|	3.3e-92	85.7	PREDICTED: uncharacterized pro...	[more]
gi\|698506780\|ref\|XP_009798757.1\|	3.3e-92	86.4	PREDICTED: uncharacterized pro...	[more]

BLAST of Spo00200.1 vs. UniProtKB/TrEMBL
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. UniprotKB/TrEMBL)
Total hits: 5

Position :

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Match Name	E-value	Identity	Description
A0A0K9S3P8_SPIOL	2.8e-106	100.	Uncharacterized protein OS=Spi...	[more]
K4BFU6_SOLLC	7.1e-94	76.2	Uncharacterized protein OS=Sol...	[more]
A0A0A0LQR0_CUCSA	1.8e-92	85.7	Uncharacterized protein OS=Cuc...	[more]
A0A0V0I0I7_SOLCH	8.7e-92	85.4	Putative ovule protein OS=Sola...	[more]
M1BQ86_SOLTU	1.9e-91	84.9	Uncharacterized protein OS=Sol...	[more]

BLAST of Spo00200.1 vs. ExPASy Swiss-Prot
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. ExPASy SwissProt)
Total hits: 0

Position :

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Match Name	E-value	Identity	Description

BLAST of Spo00200.1 vs. TAIR (Arabidopsis)
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. TAIR)
Total hits: 1

Position :

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x 1


Match Name	E-value	Identity	Description
AT1G67060.1	1.6e-92	84.0	unknown protein	[more]

InterPro

Analysis Name: InterPro Annotations of S. oleracea
Date Performed: 2018-06-29

Position :

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IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PANTHER	PTHR33979	FAMILY NOT NAMED	coord: 1..200 score: 2.9E
None	No IPR available	PANTHER	PTHR33979:SF3	SUBFAMILY NOT NAMED	coord: 1..200 score: 2.9E
None	No IPR available	PFAM	PF13398	Peptidase_M50B	coord: 27..200 score: 2.1

GO Annotation

GO Assignments

This mRNA is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0005886	plasma membrane