Spo00179.1 (mRNA) | SpinachBase

Overview


Name	Spo00179.1
Type	mRNA
Organism	Spinacia oleracea (Spinach)
Description	Malate synthase (2.3.3.9)
Location	chr1 : 30911447 .. 30915737 (+)
Sequence length	390

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGAGTGTAGGAAGGAGGCTACGGCTACCTATAATAGTGGGGTGTTGTCGGGGCTCGATCTTACCACTGGGAAGTTTAGGGAAGGTGATTGGCTGTGTGTTGCGCCACCGCCCGCGGTTGCTGATCGGAGGGTTGAGATTACAGGTCCGGTCGACAGGAAGATGATTATGAATGCTCTTGTTTATTCGTTGAGATCAGGGTAATGGTATCGTTATGTGGTGTTGAAAACAAATTTTTAAATTTTTTAAGGTGTTAAAATACAATAAAAAATAAGTAAGGTGTTAAAAAATAAAAAGTGGTTTTTAAAAGGTGTTAAAACACAAATATACCTATAAGAAAAGTTCTCTTTCCTTTACTTTTGGTAAGAAAAAGAAACTAGGCTATAAGCTTTGGATCGATCCTCAAGCGTTTTATGATTAGGTTTCCCCAACCAGCGTATCACATTAATTTTGTTAATGTTAGGAGAAAAAGTAAACACTCAAAGAGGGAAGAAATTACGTTAGGAGGAGATTAGAGAAGAGGGAAGAAATTACTTGTCTTTTTTCCTTCAAAAATTAGCTCCAATCTGATAAAATAGAGTTGTTGCTTGTGAATTGTGTTGAAGATGATGAGGGATGACAAATTCATATGGAGATAGTTGGGAAGATGATCAGAGCGCATGAATTAGATTAACCAAATTGAGTTTATTTTTCATTTTTAGTTAACCGGAGGTTTAATTAGTTTTTAATCAGTTTTGATAATGATAAAAAAAATTAAACGAGAATCAGCTTTGTGTTTTTTATAAACAAAATAACTAAAAAGGCTAAGGGGCTCTTCCGTACTCTTTCAGTTTCCTCCGTTAAACAAACATGTTCGGTAAAATCATTTGTTAAAATCCAATCTGGGACTTTTTGACAAAACAAAACGATAACATATTAGAACATCATCAGCCCTAAATTTAAAGACTTGTTGTGCTGAGATGACATATGAGTCATCTATTCTTAAGATCAGGCAAAGAAATTTGTAGGACTGAAGTGGATTGTCTTGACAAAGTCTTAAATTGAGTCTTGAAAAACCAAGACTCAACTTAAGACTCAATATACGAGTTGTATAAAATAATATCGCACATAAATTTAGGAGTCTTAAATAAATTTGAGGGGTATATTGCTCAGTTTTATTGAATCTAGTCTTTAATTTGGTAAAGTAACCGAGGGTAGTACAAACTATTCTTAGGGCGACACGAAAAGTGATGTTACGAAAAACCCCTCTACTCTTGGCTTATATAACAGAGATTCGGACTAATAGCCGAATTGAATCTCCCTTCCCAAATTCACTACTCACTAGCACCTTCCTTCTCCCATCTTTTTTTTGTTAGCAAAAATTAGTTCACTAATACTAATAAAATAGTCATAACTAGACCTGTTCAACGGAGCGGGTTCGGGCTGAAATTAAATGAGCCGGGACGATCGAGCCCGAACAGTTTTTTCCGGGCCAGACTATGTTTTATTCAGTCTGAATTTAGAAAATTAAATAAAAAACATTCATAACCATTTTGACATCTTTATCCACTACTCTAATAGACTAATACCAAAAACCCCATACCCATTTTGAAGTTTTAATACTTTTACAACACCATAGGCCCATTAACCACGAAAATACAGAGGAGAGAGAAAGTTAGAAAGAGGGGGAGAGAAAGAAAGAGAAAGACACCTCCCACTTTCCTCATACTTCCTCCGTTCTTTTTTAAATGACACAATTATTTAGGAACGTTTGCCAATGTACAATTTCAAACATTAATATCTCTAATTGTGGATCAGATTTTTTTTTAAAAAAGTTGATATTAAAATAATATTTACTGATACGAATCTAATAAGATCCCACACGACTATGTTTTTTCTTATGTATAAACCACAAAAGGAAGTCAAATGTGCTTGTGTGAATAGTGTCTAAAACCCCATTATATCGTGTAAATAAGAACAGAGGGAGTATTATTCTTCCCCAAATTTTTATTATTTTTTGTTTGATTTAATCAGCTTGAATTTTCATATAGGACCCAAACAACACCCAGCTACTCCACCGTCTTCCTCCCTTTTTCTTTTTAATTTTTATTTTCAATAAATTGTTATTTTTGTTTGAAAGCTGCTCTTCAACAAAACCACCATTAAAGATAACCTTTGTTTTTTGTTAATCTGAGCTCCATTTATGGGTCTTTTTAAAAAACTCAAGCGGTTTACTTTCATTTTCAGATTCTGGGTAACGCTGATTTCTCTTTGTTCTCCCTTAATTGGGTATTTGGGTTGCATTCCTAATTTTAAAGCTTGAATTTTTTGTATTTTTTTAATATATACTCCCTCCGTCCCGGAATACTCGACCCGGTTTGACCGGCACAGAGTTTAAGGGATTTGAATTGACTTATTTAATTTAATAGGTAGTAGTTGATAGTGGAGTATTATTTTAATGTAGTTAGTGGGAAATGTGTAAAGGGGTGGGGTTGGGGGAGAGTAGGGGTTGGATTTTTAATTATTTTTTGTATGGAGTAGGGGGTAGGTGGGTTAATAGGGGTGGGGTGAGAAATAATATAATATTGTTAGAATATTTCCATTTCTAGAAACAGGTCAAGTATTAAGGGACGACCCGATAAGGAAAACAGGTCAAGTATTCCGGGACGGAGGGAGTATATAAAATAATTCAGGTTAAGGGATTTTTCTTTGATTTCCTAGTTGTTGCAATTCTGAATCTGAATTAAAAACCCTTATTTGGAAATTCAAAATCGTAGTTGGTCCATTTATAACATTTAAGGGCTGAGCCCGTTTATAAACGGGCTGGATACGGGCTTTTACGGAAGACTCGGCCCATTGAACATGTCTAGTCATAACTCATACGATATAGTAACCTCCTCCCTATCTTGTCATCTGCTAAATCCATAATTGGGATAATATTCTCCACAATATTATCTTTCTTTCCTAGATATTCTAGTTGACTTGTGATTATCAACTGAATCATATTTCAAATGTCCGGCCTCTAGATTTTCTCCTTAATTCCTGCCTCTACCATGATCTCCTCCTTGTCAATATCCCCTTTAAACTCCATTTCATTTGCACGTTTAATTAGATTTTCATGAGCATCCTCTTATCATAAAAATTTTATAATAATTAAGTGCATTGATCCAAGGTATAGTGTATAGTGTAAGTGTGTAACTATTGATATATTTATTTGATTTAAAGTGTGGTTGTGGTGATTATGATTTACAATTTGTCTCTAATGATATATATATATATATATATATATATATATGCATTATTTGGCAGCCTCCAATTCATTTTTATCTCGACATGTCCTCTATGACTTATATACGACAAAAGGAAAGTTCTGTTTTTGACGTCAACGGAGCAGTATTTTCCGGACAACTTAGCGCCGTCATGTGTTCTGACAGTACAGAAGTTGAAAAGTACTGCGATTCATCTCTATTATATAAAGGAACAGCTGAGGGCTTTTTAGTAACTTAACTTTTCGTGTCCCCCAAGTAAATGACTAAAATACCCTCAGTGTGTTGTTTATCGGGCTTGCTGAGTATTCGTTTCTAGGGTTAGATTTTGATATTTCGCTCTCCTCTCACCTGCCTCTCTCCCGCCTCACTTTTCTTCTCTCTCTCCCTCTTCACATTCAACCCTTTCTTCATCTCTCCTCTCACATTTTAGTTTTTTGAATTTTCTGCTCCTCAGATCTTTCCCCTCCTGTAAATTCTGGATCATTAACCTAGCGGATAGCACAATCACCGGAGAGTTTACCGGCGTGTTTGTCGGCGGAGTAAGGCACCTTAGGGAGTGCCTTACGGACCTTCTTTGTTCGTCGGATCTGAAGCATCGCCATTAGCAAAGCGCAGAGGAGAACGACGATTGTTTTGTCATTTTATCAACTCACAAAGGTAAACCCTTGCATTTTTCTCCTTTTCCGTCGTTAATCTTCATTTTCCTCTATTATTATTCCCAAAACCCTAATTGTTGCTTTGTGTCGGCGGTGGTTTCTTAGAAATCTGATGGTGGTTAGGCGCTCTCTCTTCGAAATCGCCGCCGCCGTCATGCTTCATCTCATCATAATGTTTCATCGCCGCCGCTGTCGGGTGAGTGAATCCTGAATTGAAACCTAACATCAGAACTCGAAAGGTAGTAGTAGCTATGGGGTCCTGGATTTAAACCTTGATTTCATAAAATCTTCCTTGAATTTCATAATTTACGGATTGATTATTGATTTTGATATTTGGTGCTCAAAACCCTAACAGGTGAATGCCGTGAATCTCTAGGGTTTGTTTGA

mRNA sequence

ATGGAGTGTAGGAAGGAGGCTACGGCTACCTATAATAGTGGGGTGTTGTCGGGGCTCGATCTTACCACTGGGAAGTTTAGGGAAGGTGATTGGCTGTGTGTTGCGCCACCGCCCGCGGTTGCTGATCGGAGGGTTGAGATTACAGGTCCGGTCGACAGGAAGATGATTATGAATGCTCTTGTTTATTCGTTGAGATCAGGATCTTTCCCCTCCTGTAAATTCTGGATCATTAACCTAGCGGATAGCACAATCACCGGAGAGTTTACCGGCGTGTTTGTCGGCGGAGCGCTCTCTCTTCGAAATCGCCGCCGCCGTCATGCTTCATCTCATCATAATGTTTCATCGCCGCCGCTGTCGGGTGAATGCCGTGAATCTCTAGGGTTTGTTTGA

Coding sequence (CDS)

ATGGAGTGTAGGAAGGAGGCTACGGCTACCTATAATAGTGGGGTGTTGTCGGGGCTCGATCTTACCACTGGGAAGTTTAGGGAAGGTGATTGGCTGTGTGTTGCGCCACCGCCCGCGGTTGCTGATCGGAGGGTTGAGATTACAGGTCCGGTCGACAGGAAGATGATTATGAATGCTCTTGTTTATTCGTTGAGATCAGGATCTTTCCCCTCCTGTAAATTCTGGATCATTAACCTAGCGGATAGCACAATCACCGGAGAGTTTACCGGCGTGTTTGTCGGCGGAGCGCTCTCTCTTCGAAATCGCCGCCGCCGTCATGCTTCATCTCATCATAATGTTTCATCGCCGCCGCTGTCGGGTGAATGCCGTGAATCTCTAGGGTTTGTTTGA

Protein sequence

MECRKEATATYNSGVLSGLDLTTGKFREGDWLCVAPPPAVADRRVEITGPVDRKMIMNALVYSLRSGSFPSCKFWIINLADSTITGEFTGVFVGGALSLRNRRRRHASSHHNVSSPPLSGECRESLGFV

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
Spo00179	Spo00179	gene

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
Spo00179.1	Spo00179.1-protein	polypeptide

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Spo00179.1.exon.1	Spo00179.1.exon.1	exon
Spo00179.1.exon.2	Spo00179.1.exon.2	exon
Spo00179.1.exon.3	Spo00179.1.exon.3	exon
Spo00179.1.exon.4	Spo00179.1.exon.4	exon

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Spo00179.1.CDS.1	Spo00179.1.CDS.1	CDS
Spo00179.1.CDS.2	Spo00179.1.CDS.2	CDS
Spo00179.1.CDS.3	Spo00179.1.CDS.3	CDS
Spo00179.1.CDS.4	Spo00179.1.CDS.4	CDS

Homology

[Close]

BLAST of Spo00179.1 vs. NCBI nr
Match: gi|902157172|gb|KNA06099.1| (hypothetical protein SOVF_184210 [Spinacia oleracea])

HSP 1 Score: 104.4 bits (259), Expect = 1.500e-19
Identity = 48/60 (80.00%), Postives = 50/60 (83.33%), Query Frame = 1

		  
Query: 1   MECRKEATATYNSGVLSGLDLTTGKFREGDWLCVAPPPAVADRRVEITGPVDRKMIMNAL 60
           MECRKEA A YNSG L G D TT K REGDW C APPPAVADRRVEITGPV+RKMI+NAL
Sbjct: 63  MECRKEAKAKYNSGALPGFDPTTKKIREGDWCCAAPPPAVADRRVEITGPVERKMIINAL 122

[Close]

BLAST of Spo00179.1 vs. NCBI nr
Match: gi|731333839|ref|XP_010677928.1| (PREDICTED: malate synthase, glyoxysomal [Beta vulgaris subsp. vulgaris])

HSP 1 Score: 98.2 bits (243), Expect = 1.100e-17
Identity = 45/60 (75.00%), Postives = 50/60 (83.33%), Query Frame = 1

		  
Query: 1   MECRKEATATYNSGVLSGLDLTTGKFREGDWLCVAPPPAVADRRVEITGPVDRKMIMNAL 60
           M+CRKEA A YNSG L   D TT K REG+W+C APPPAVADRRVEITGPV+RKMI+NAL
Sbjct: 62  MQCRKEAKAKYNSGALPWFDPTTRKIREGNWVCSAPPPAVADRRVEITGPVERKMIINAL 121

[Close]

BLAST of Spo00179.1 vs. NCBI nr
Match: gi|747053678|ref|XP_011073010.1| (PREDICTED: malate synthase, glyoxysomal [Sesamum indicum])

HSP 1 Score: 95.5 bits (236), Expect = 7.200e-17
Identity = 43/60 (71.67%), Postives = 48/60 (80.00%), Query Frame = 1

		  
Query: 1   MECRKEATATYNSGVLSGLDLTTGKFREGDWLCVAPPPAVADRRVEITGPVDRKMIMNAL 60
           MECRKEA   YN+G L G D  T   REG+W+C APPPAVADRRVEITGPV+RKMI+NAL
Sbjct: 63  MECRKEAKMRYNNGALPGFDPATKYVREGEWVCAAPPPAVADRRVEITGPVERKMIINAL 122

[Close]

BLAST of Spo00179.1 vs. NCBI nr
Match: gi|848913054|ref|XP_012854673.1| (PREDICTED: malate synthase, glyoxysomal [Erythranthe guttata])

HSP 1 Score: 91.7 bits (226), Expect = 1.000e-15
Identity = 41/60 (68.33%), Postives = 46/60 (76.67%), Query Frame = 1

		  
Query: 1   MECRKEATATYNSGVLSGLDLTTGKFREGDWLCVAPPPAVADRRVEITGPVDRKMIMNAL 60
           MECRK+A   YN+G L G D  T   R+GDWLC A PP VADRRVEITGPV+RKMI+NAL
Sbjct: 66  MECRKDAKMRYNNGALPGFDPATAHVRDGDWLCAAVPPPVADRRVEITGPVERKMIINAL 125

[Close]

BLAST of Spo00179.1 vs. NCBI nr
Match: gi|703124610|ref|XP_010103099.1| (Malate synthase [Morus notabilis])

HSP 1 Score: 91.3 bits (225), Expect = 1.400e-15
Identity = 41/60 (68.33%), Postives = 46/60 (76.67%), Query Frame = 1

		  
Query: 1   MECRKEATATYNSGVLSGLDLTTGKFREGDWLCVAPPPAVADRRVEITGPVDRKMIMNAL 60
           +ECRKEA   YN G L G D  T   REGDW+C A PPAVADR+VEITGPV+RKMI+NAL
Sbjct: 67  LECRKEAKRRYNDGALPGFDPATKYIREGDWVCAAVPPAVADRKVEITGPVERKMIINAL 126

[Close]

BLAST of Spo00179.1 vs. UniProtKB/TrEMBL
Match: A0A0K9QFS2_SPIOL (Malate synthase OS=Spinacia oleracea GN=SOVF_184210 PE=3 SV=1)

HSP 1 Score: 104.4 bits (259), Expect = 1.100e-19
Identity = 48/60 (80.00%), Postives = 50/60 (83.33%), Query Frame = 1

		  
Query: 1   MECRKEATATYNSGVLSGLDLTTGKFREGDWLCVAPPPAVADRRVEITGPVDRKMIMNAL 60
           MECRKEA A YNSG L G D TT K REGDW C APPPAVADRRVEITGPV+RKMI+NAL
Sbjct: 63  MECRKEAKAKYNSGALPGFDPTTKKIREGDWCCAAPPPAVADRRVEITGPVERKMIINAL 122

[Close]

BLAST of Spo00179.1 vs. UniProtKB/TrEMBL
Match: A0A0J8CGS7_BETVU (Malate synthase OS=Beta vulgaris subsp. vulgaris GN=BVRB_5g110660 PE=3 SV=1)

HSP 1 Score: 98.2 bits (243), Expect = 7.700e-18
Identity = 45/60 (75.00%), Postives = 50/60 (83.33%), Query Frame = 1

		  
Query: 1   MECRKEATATYNSGVLSGLDLTTGKFREGDWLCVAPPPAVADRRVEITGPVDRKMIMNAL 60
           M+CRKEA A YNSG L   D TT K REG+W+C APPPAVADRRVEITGPV+RKMI+NAL
Sbjct: 62  MQCRKEAKAKYNSGALPWFDPTTRKIREGNWVCSAPPPAVADRRVEITGPVERKMIINAL 121

[Close]

BLAST of Spo00179.1 vs. UniProtKB/TrEMBL
Match: A0A022Q682_ERYGU (Malate synthase OS=Erythranthe guttata GN=MIMGU_mgv1a003675mg PE=3 SV=1)

HSP 1 Score: 91.7 bits (226), Expect = 7.200e-16
Identity = 41/60 (68.33%), Postives = 46/60 (76.67%), Query Frame = 1

		  
Query: 1   MECRKEATATYNSGVLSGLDLTTGKFREGDWLCVAPPPAVADRRVEITGPVDRKMIMNAL 60
           MECRK+A   YN+G L G D  T   R+GDWLC A PP VADRRVEITGPV+RKMI+NAL
Sbjct: 66  MECRKDAKMRYNNGALPGFDPATAHVRDGDWLCAAVPPPVADRRVEITGPVERKMIINAL 125

[Close]

BLAST of Spo00179.1 vs. UniProtKB/TrEMBL
Match: W9RKE6_9ROSA (Malate synthase OS=Morus notabilis GN=L484_005078 PE=3 SV=1)

HSP 1 Score: 91.3 bits (225), Expect = 9.400e-16
Identity = 41/60 (68.33%), Postives = 46/60 (76.67%), Query Frame = 1

		  
Query: 1   MECRKEATATYNSGVLSGLDLTTGKFREGDWLCVAPPPAVADRRVEITGPVDRKMIMNAL 60
           +ECRKEA   YN G L G D  T   REGDW+C A PPAVADR+VEITGPV+RKMI+NAL
Sbjct: 67  LECRKEAKRRYNDGALPGFDPATKYIREGDWVCAAVPPAVADRKVEITGPVERKMIINAL 126

[Close]

BLAST of Spo00179.1 vs. UniProtKB/TrEMBL
Match: D7LWU5_ARALL (Malate synthase OS=Arabidopsis lyrata subsp. lyrata GN=ARALYDRAFT_660232 PE=3 SV=1)

HSP 1 Score: 90.9 bits (224), Expect = 1.200e-15
Identity = 40/60 (66.67%), Postives = 48/60 (80.00%), Query Frame = 1

		  
Query: 1   MECRKEATATYNSGVLSGLDLTTGKFREGDWLCVAPPPAVADRRVEITGPVDRKMIMNAL 60
           MECR+EA   YNSG + G D +T   R+GDW+C + PPAVADRRVEITGPV+RKMI+NAL
Sbjct: 58  MECRREARRRYNSGAVPGFDPSTKFIRDGDWICASVPPAVADRRVEITGPVERKMIINAL 117

[Close]

BLAST of Spo00179.1 vs. ExPASy Swiss-Prot
Match: MASY_ARATH (Malate synthase OS=Arabidopsis thaliana GN=MLS PE=1 SV=1)

HSP 1 Score: 89.4 bits (220), Expect = 3.200e-17
Identity = 40/60 (66.67%), Postives = 47/60 (78.33%), Query Frame = 1

		  
Query: 1   MECRKEATATYNSGVLSGLDLTTGKFREGDWLCVAPPPAVADRRVEITGPVDRKMIMNAL 60
           MECR+EA   YNSG + G D +T   R+GDW C + PPAVADRRVEITGPV+RKMI+NAL
Sbjct: 58  MECRREARRRYNSGAVPGFDPSTKFIRDGDWSCASVPPAVADRRVEITGPVERKMIINAL 117

[Close]

BLAST of Spo00179.1 vs. ExPASy Swiss-Prot
Match: MASY_GOSHI (Malate synthase, glyoxysomal OS=Gossypium hirsutum PE=2 SV=1)

HSP 1 Score: 89.0 bits (219), Expect = 4.200e-17
Identity = 42/60 (70.00%), Postives = 44/60 (73.33%), Query Frame = 1

		  
Query: 1   MECRKEATATYNSGVLSGLDLTTGKFREGDWLCVAPPPAVADRRVEITGPVDRKMIMNAL 60
           MECRKEA   YN G L G D  T   REG W CV  PPAVADRRVEITGPV+RKMI+NAL
Sbjct: 63  MECRKEAKRRYNEGALPGFDPATRYIREGKWTCVPFPPAVADRRVEITGPVERKMIINAL 122

[Close]

BLAST of Spo00179.1 vs. ExPASy Swiss-Prot
Match: MASY_BRANA (Malate synthase, glyoxysomal OS=Brassica napus PE=2 SV=1)

HSP 1 Score: 87.4 bits (215), Expect = 1.200e-16
Identity = 38/60 (63.33%), Postives = 47/60 (78.33%), Query Frame = 1

		  
Query: 1   MECRKEATATYNSGVLSGLDLTTGKFREGDWLCVAPPPAVADRRVEITGPVDRKMIMNAL 60
           MECR+E    YNSG + G D +T   R+G+W+C + PPAVADRRVEITGPV+RKMI+NAL
Sbjct: 58  MECRREVKRRYNSGAVPGFDPSTKFIRDGEWVCASVPPAVADRRVEITGPVERKMIINAL 117

[Close]

BLAST of Spo00179.1 vs. ExPASy Swiss-Prot
Match: MASY_CUCMA (Malate synthase, glyoxysomal OS=Cucurbita maxima PE=1 SV=1)

HSP 1 Score: 85.5 bits (210), Expect = 4.600e-16
Identity = 38/60 (63.33%), Postives = 44/60 (73.33%), Query Frame = 1

		  
Query: 1   MECRKEATATYNSGVLSGLDLTTGKFREGDWLCVAPPPAVADRRVEITGPVDRKMIMNAL 60
           MECR+EA   YN G + G D  T   RE +W C + PPAVADRRVEITGPV+RKMI+NAL
Sbjct: 63  MECRREAKRRYNEGAVPGFDPATKYIRESEWTCASVPPAVADRRVEITGPVERKMIINAL 122

[Close]

BLAST of Spo00179.1 vs. ExPASy Swiss-Prot
Match: MASY_CUCSA (Malate synthase, glyoxysomal OS=Cucumis sativus PE=2 SV=2)

HSP 1 Score: 83.6 bits (205), Expect = 1.800e-15
Identity = 38/60 (63.33%), Postives = 43/60 (71.67%), Query Frame = 1

		  
Query: 1   MECRKEATATYNSGVLSGLDLTTGKFREGDWLCVAPPPAVADRRVEITGPVDRKMIMNAL 60
           MECR+EA   YN G L G D  T   R+ +W C   PPAVADRRVEITGPV+RKMI+NAL
Sbjct: 64  MECRREAKRRYNEGGLPGFDPATKYIRDSEWTCAPVPPAVADRRVEITGPVERKMIINAL 123

[Close]

BLAST of Spo00179.1 vs. TAIR (Arabidopsis)
Match: AT5G03860.1 (malate synthase)

HSP 1 Score: 89.4 bits (220), Expect = 1.800e-18
Identity = 40/60 (66.67%), Postives = 47/60 (78.33%), Query Frame = 1

		  
Query: 1   MECRKEATATYNSGVLSGLDLTTGKFREGDWLCVAPPPAVADRRVEITGPVDRKMIMNAL 60
           MECR+EA   YNSG + G D +T   R+GDW C + PPAVADRRVEITGPV+RKMI+NAL
Sbjct: 58  MECRREARRRYNSGAVPGFDPSTKFIRDGDWSCASVPPAVADRRVEITGPVERKMIINAL 117

The following BLAST results are available for this feature:

BLAST of Spo00179.1 vs. NCBI nr
BLAST of Spo00179.1 vs. UniProtKB/TrEMBL
BLAST of Spo00179.1 vs. ExPASy Swiss-Prot
BLAST of Spo00179.1 vs. TAIR (Arabidopsis)

BLAST of Spo00179.1 vs. NCBI nr
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. NCBI nr)
Total hits: 5

Position :

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x 1


Match Name	E-value	Identity	Description
gi\|902157172\|gb\|KNA06099.1\|	1.5e-19	80.0	hypothetical protein SOVF_1842...	[more]
gi\|731333839\|ref\|XP_010677928.1\|	1.1e-17	75.0	PREDICTED: malate synthase, gl...	[more]
gi\|747053678\|ref\|XP_011073010.1\|	7.2e-17	71.6	PREDICTED: malate synthase, gl...	[more]
gi\|848913054\|ref\|XP_012854673.1\|	1.0e-15	68.3	PREDICTED: malate synthase, gl...	[more]
gi\|703124610\|ref\|XP_010103099.1\|	1.4e-15	68.3	Malate synthase [Morus notabil...	[more]

BLAST of Spo00179.1 vs. UniProtKB/TrEMBL
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. UniprotKB/TrEMBL)
Total hits: 5

Position :

Zoom :

x 1


Match Name	E-value	Identity	Description
A0A0K9QFS2_SPIOL	1.1e-19	80.0	Malate synthase OS=Spinacia ol...	[more]
A0A0J8CGS7_BETVU	7.7e-18	75.0	Malate synthase OS=Beta vulgar...	[more]
A0A022Q682_ERYGU	7.2e-16	68.3	Malate synthase OS=Erythranthe...	[more]
W9RKE6_9ROSA	9.4e-16	68.3	Malate synthase OS=Morus notab...	[more]
D7LWU5_ARALL	1.2e-15	66.6	Malate synthase OS=Arabidopsis...	[more]

BLAST of Spo00179.1 vs. ExPASy Swiss-Prot
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. ExPASy SwissProt)
Total hits: 5

Position :

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x 1


Match Name	E-value	Identity	Description
MASY_ARATH	3.2e-17	66.6	Malate synthase OS=Arabidopsis...	[more]
MASY_GOSHI	4.2e-17	70.0	Malate synthase, glyoxysomal O...	[more]
MASY_BRANA	1.2e-16	63.3	Malate synthase, glyoxysomal O...	[more]
MASY_CUCMA	4.6e-16	63.3	Malate synthase, glyoxysomal O...	[more]
MASY_CUCSA	1.8e-15	63.3	Malate synthase, glyoxysomal O...	[more]

BLAST of Spo00179.1 vs. TAIR (Arabidopsis)
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. TAIR)
Total hits: 1

Position :

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x 1


Match Name	E-value	Identity	Description
AT5G03860.1	1.8e-18	66.6	malate synthase	[more]

InterPro

Analysis Name: InterPro Annotations of S. oleracea
Date Performed: 2018-06-29

Position :

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x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001465	Malate synthase	PFAM	PF01274	Malate_synthase	coord: 1..63 score: 6.
IPR011076	Malate synthase-like	unknown	SSF51645	Malate synthase G	coord: 2..64 score: 4.5
None	No IPR available	GENE3D	3.20.20.360		coord: 27..82 score: 1.
None	No IPR available	PANTHER	PTHR21631	ISOCITRATE LYASE/MALATE SYNTHASE	coord: 1..60 score: 1.5
None	No IPR available	PANTHER	PTHR21631:SF1	MALATE SYNTHASE 1, GLYOXYSOMAL-RELATED	coord: 1..60 score: 1.5

GO Annotation

GO Assignments

This mRNA is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006097	glyoxylate cycle
biological_process	GO:0006090	pyruvate metabolic process
biological_process	GO:0006099	tricarboxylic acid cycle
cellular_component	GO:0005634	nucleus
cellular_component	GO:0005777	peroxisome
molecular_function	GO:0003824	catalytic activity
molecular_function	GO:0004474	malate synthase activity