Spo14399.1 (mRNA) | SpinachBase

Overview


Name	Spo14399.1
Type	mRNA
Organism	Spinacia oleracea (Spinach)
Description	Chlorophyll a-b binding protein 1, chloroplastic (Chlorophyll a-b protein 140) (CAB-140) (LHCII type I CAB-1) (Precursor)
Location	chr1 : 35817088 .. 35823338 (+)
Sequence length	1053

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGAGGAGCTGTATTTTGAGTGCACCTGATGGTTCTCTGTATGTAATGTTGTATGTACTTGAATTGAAGAGAGGGTAATAATATCTCGGTTCTATTGTTCCGTGTCCATGTATTCAAAATTCTGAATGAACCACGTTTATATGATGTCAAAGGGTTATCATTCAAGTAATTTGGTACTGTCAGAAAATTGGAAACCAAGTCCTTGTTTACTTCCTCTTGTGTTTTATTTTGGCTTTTTTTTTTTTTTTTTTTTGGTTTTACTACGAGGAGTTCCCACCGCCTTCGGTGAGTGGACTAATCTTCCGCGGGAGTTTGCATGGATATCTCGATGGGCAGCATACCTCCCAATTGAGATTTCTTCCATTCCCAAGCCTCGAACCCGATATCTTGGTTAATGAGCAAGAGGATCTCAACCACTCATGCCAACCTCAATTGATATTTTGGCTTTATTATTGCTAGCTATTTTCTCATATACGGAGTACTCATTCCGCATTTGTGAAAATTATTGCATGTATGCTGGTATGCTTGGAACCAACATAAGTTGGTGGAGTTGGTGGGAAACTCACCTTGTGACTTGGAGGTCACAAGTTCGAGCCCCATCAACTGCGAAATGCTTGGGAGTGGCTCAAGCGATGACCTGCGGAGCTGGGCTGGTTAACCTGTGCTAGGTGCTGGTTCAGTTAGGGTCTCTTCTTCTTACCTATTAAAAAAAAAATGCTGGTATGCTTGGCTCTTAGGTGCGCCTATGCGCAAAATAGAAACTTGCTATACGAAATAGAAGTTTTTGTATACAGTTTTTTGTTTAAGGTACAAATGTACATCCTTAACTGGTGATATTTGATGATAAAAAATTTATACTCTCTTTGTCCCTTATTGTTTGCTTCATTTGACTTTAAACGATCTTTAACACACAAGTCAAACTGTAACTTTAATTAAAAATTTAAAAGGTCGATATGCTATAATTGTACATTGAATAAGACCTGACATGTTACTCTTTTATAGATTTATAAGAATTCATGATAACGCGTTTTAAAGTTTGACCCCAAAAAATACAATAGAGCAAACGTTAGGGGACGAAAGGAGTAGCAATAAACAATTATTACCATTAAAATTTAGGCTTACTAGCTAGGTCAAAATAAGTTTTTTTTTAATCATATTCTCTTACTAATCGTTATCAGATGATTTCTTACATTAATCTATTAACTATAGGGTACTTATTTACTAACTACCCTATTATTACAACTAATAATTAGAGCTAAACCAAGTTGTATGATTTTCTGTAGACTAAAATTCTTATACAAGTAACTATTTTACAAACTTAACAACTACAGATGGGAAGCATAGAATTACACAAATGAGTATTGAGTGGGACATAGATATTACTACTAGGCTACTAGCCATGCATATTGAAGGAAAGAGAACCACAAGTTTCTGATTATTCCAAGCAAAACAGAAGACATGAGATTCTATATGCCACATGGCAATCCCATTAACCAATTGGAAATCAAACTTATCTATCTTTCAAGATAAGCCCACTCCCCATTTCTTACAATTAAGGCAGCATCAAAAAGCCCATTTGGGTTGATATCATTTCTACCAAAACACACAGCCAAAAATTCACAACAAATATGTCTTCTGTGTGTGCTTCTTCAGCCACCACAGCTGTTTGTGCTTCTTCTGCCAGGCAAGTTCTTTCTTGATCCATTATCGTTTTTAAAAATAAAAAATAACATATAATCTTTTATGTATTACTTTGTTTCATATGGCATATAATAAGCTTAATTAGAGTTTTAAAAAGATTACAAAATGTCACACTTTCCAACATAAATACCAGATCATATTGTAAGGTTTGTTAAAAAAAATGAAACAGTTCACAGAAGAAAGGAAATGTATTGGGAGCAACAAGAGCATCATTCCTAGGAGGAAAGAAGTTGAGAGACAGCAGCAAATACAGAACACCCGTTTCCTCAAACTCCTTCTCTGTCTCCGCAGCTGCAGCTGAACCAGAGAGGCCTATTTGGTTCCCTGGTAGCACCCCTCCTTCTTGGCTAGATGGAAGGTCTGTAACTTTTTTTTTTTTTTTGTTTTTACTCTCTTCCGTTCACCCCTAATTATTTCATATTACGTATATGTTAGGGTAAAATAGTAAATTTTCATAGAGATCGTGCACGTTCTATCCCTTTGTTTTGAATCCGTATATATAATGGTACTCCATCTTTATTTTAAAATACAAACTAAAAAAGAGATACATTTCCTTAAACGGCCGTATTTTAAAAAGAGATAAGCTTTTCTACTAATATTTCTCTCTTTCTCGTGGTCGCTGCACTTACTCGCATCATCCTTATATTATACTCCGTAATAAATAATTCATCCACTATCCGACTTTCATCTTATTTTAATAAATTCAACTCACTCTCCTAAAACTAAATGTCGGTCAAAGTATATCTCTTTTTTAAAACTAGAAGTAAAATAATAATATTTCATAGAAATCATGCATATTTTATCCCCATTGTTTTGAATCCGTACATGTGATAGTAAAATAGTAAATTTTCTTAGAGATCGCGCATGTTTTATCCCCATTGTTTTGAATCCGTACAAGCCTCAGATCAACTACCACTATTAATAATGTTCGCCATAGTGAACCCAGCATTCTCTTACTAAGTTACTAGAGATATGCATATCTGAGGTGATCTTCCCCTTGATTTTGCATATCAGCTGAGGAGAAAATGTGAGAATGATCACTGTGGCACCCCAAATCATGACATAAAAATACCATTTTTACACCATTACTGTATATCCAGCACCAACACCAAATCCATCAAACAAGCGAACTCTTGAAACTTCAGTAACTTAACATTGTATAAAAATTCAAAATCGAAGCTTCGAAACAACAAGGCCATTAACATTATAACTTAACATTGTATTCATCTTTCACTAACAAATCAAAGCTCATCCTCCAACCTCAAATACTCACCAATATCACCTTGATGAATGACCACCATAGTTTGCGGGTCTGATTTACGAACATCCTTGGTCGATTTGGTGGCGATTCCGAAACCCAAAGGAACATCAGACATTGAATAAACAACAATACCATCACCACCATTTATATCTTCAGTAATCCTCCCTAAATGAGCCTTCAACACAGCATTCCCATACAAAAACGACATCTCTGAGGTCGGTTTAAGCCATACCTTGTGCTTCGCATTCGGGGCCAAGAGAGATAGAGCGTGAATTGTCAGATGGAAGTTCCCACTGTGGGTGAACTTCCCCACTTGTACACCCAGTGAAACCAGCAGCTCCTTCGAAACGTTTGTTGCGCGTTTCACGAGTGATTCACTAGCGTAGTACACACGATTCTTCTGGAGGCGGAAGCAGTACCGGCCTGGGAGCGGGTCTTGTGCGGGCCCTTCGTAGGATGGATTGTCGACGATGTTCTTGAGGTTGTTGCCGACGAACTTGAAGAGTTTCTCGAACACGATGGTGGTTTCTTGCTCGTCTAGGGTTCTCATATTCTAGTACGATGGTGGTTATTGAGGCGGCGTCAACGGCGGCGATTAGGGCTTTAGGGGATACCGGTTCACTTTAGTCAAATTTGGGAGGGTTTAGAGAGAGATCACGTTTATTTTTAGTCTCTACTTGATTTATTTTTATTGCTTTTGCCCCTTTGTATGTGTAAAGGTAAAATCTACCTATTACTATGGTGTAAAATTTTCCCGCCTAAAATATTTTTCAAAAATATATATATTTTTATTTTTTTATTATTCTCTACCTTTTTGTAAACTATCTTATACCCCCATAATGCAAAGTGCAGCTTCTGGGGCCAGTCTTTGTAATTGGTTGTCATTTTCATGATGATGGTTTTGACATTCTTGTTGGCTTCTTCGACTGCCCCATTAGTTTGCGGGCGATAAGGCGAAAAACGGTGATGTTGAATTTTGTACTCATTGAATAGATCTTCACACTCTCCTTGAAAATGGGTTCCCTGGTCGCTAATATGGAAAAAAAGTTAATAAATTATGGCAATAATAGATATCACGTGATAATAATTTTGCTAAATATTTTTTGATAATGTTTTAGTCAAATCGGTAGTATAGTAATGAAAAATATATTCACTCGATATGTCGATCAAATTAGCATATTACACATATATAATATGCATATTAGATTAATAAATTTAAATGAGTATGTTGATTTTTTTTTATAATTATGCAGTACTTTGGGGATATTTAGTTAAATATTTTATGAAAAATAATTATCATAATCCGTGCGTGCACGGGATCTAATCTAGTACTGTAGTACATAGAGATCACATTTGTTTTATCCCGCTTTTCTTTATTTTTGTGCAATTTTATTGTTTCTGATTAATTTCATATTATGTTTATGAAATTGCAGCCTTCCAGCAGACTTTGGCTTTGATCCTCTTGGATTTGGTAAGTCCACTTAAGACTTTTTTCCTTTACGAAATACTTTGACTTTTGACCCTATTCACAAATTTTAATTTGACTATCATTTATGATTTATAGGTAATAAAAAATATAGTCGTGTGGTATCTTGTTTGATTTGTCTCGATATATATACTTTCAAAATATCAACTTCTTATAATTTTTACGAATGCAAAAATAGAGATATTAATGTCTAAACATTTTCATTAGCAAGCGTGAAAAGTTAAATTGTCCCCATTATTTCGAAACGGAAGGAGTAAGTAACAAACACGCACGTGACATTAATTTTTGTGACGTACGGAGTATATTATTTAAAAACAACCCTCTAAGTCTATGATGGCTTGGATCCAAATACAACATCTTTAGTACCAACACAGAATATGTCAATACCAAAAACGAAAATGAAGTTAAAGTAGCTAACGAGTAGCTGAATAGGCTAGACTCATTATCATTTACTTGTATCAGTTATCACCCCTAGTTACAAAACTATGTAAAGGGTATCTAGTCAAATTGTACCATGTTTTAATTGAAATGTGGTGAAAGTGGAAGAATTAAGCAATTTTGTAGGCCAATGATTAGATACATTACCATTGTCAATATTAATTTCAATTTTCAAGAAAACGATGTTAAATAGATAATTCTATGTATGTAACTACGTACCATTACCATTATATATCCGGGTGTACCATGTATATACTATAAGGACACTCATTTTTTTGCTCATTTGCTTGTTTGATCAATCTCTTTGTAATGAACAAGTAGCAAAAAAAATTACGTTTGGATTTACGATACATATATCTGGATGGATGAACAATGGAAATTGTAGGTAAAAAATCTAATGATATGAGTTTTGTTATGGAATATGGACCCCAAAATCTGTAAATAATGTACATGACATTTAAACAGGTTCGGACCCAGAAACATTGAGATGGATGGTACAATCAGAAATAGTACATTGCAGGTGGGCAATGTTAGGAGCAGCTGGTATTTTCATCCCTGAATTCTTAACCAAACTTGGCATCCTAAACACCCCTTCTTGGTACACTGCTGGTGAACTCGACTACTTCACCGACACCACCACCCTTTTCGTTGTCGAGTTGGTTTTGATTGGTTGGGCCGAAGGACGTAGATGGGCTGACATCCTTAAACCCGGTTGCGTCAACACCGACCCAATCTTCCCCAACAACAAGCTCACCGGTACCGATGTGGGCTACCCTGGTGGGCTTTGGTTTGACCCATTGGGCTGGGGTTCGGGCTCGCCACAAAAGGTTAAGGAGTTGAGGACTAAGGAGATCAAGAATGGTAGGTTGGCTATGTTGGCTGTTATGGGAGCTTGGTTCCAACACATTTACACTGGGACTGGCCCAATTGATAACCTCTTTGCTCATCTTGCTGATCCTGGCCATGCCACTATTTTTTCTGTAAGTGTATTCATTTTCGCTTTTTATAACTTATCCGAACTTATTTTATCTGAAATAAGTCAAAATAACTTCTTTTTTTATATAATTTATCTGAACTTATTTTATCTGAAGTTATTAAATAAGTCGAACATACAGAATAGACGACCATTAATCACACTCGGATTATATTGATGCAAAATAATTGTCCTTTTTTCAGGCTTTTACCCCCAAGTGATGAGAGCAGAGGAAGAAGCTAGAAATGTTGGTTGTTCTAGGATAAGAGGAATGGGTTAATTTAAAAGGGTATTTGGAGGAAATTACGAGCAAATCAGCAGATCTTGAATGGTTGTTTAGTGGTTGCACCTACGAAATGTTGGAGCTTTGTACAAATGCCTCTTGGATTTAA

mRNA sequence

ATGAGGAGCTGTATTTTGAGTGCACCTGATGGTTCTCTCATCAAAAAGCCCATTTGGGTTGATATCATTTCTACCAAAACACACAGCCAAAAATTCACAACAAATATGTCTTCTGTGTGTGCTTCTTCAGCCACCACAGCTGTTTGTGCTTCTTCTGCCAGTTCACAGAAGAAAGGAAATGTATTGGGAGCAACAAGAGCATCATTCCTAGGAGGAAAGAAGTTGAGAGACAGCAGCAAATACAGAACACCCGTTTCCTCAAACTCCTTCTCTGTCTCCGCAGCTGCAGCTGAACCAGAGAGGCCTATTTGGTTCCCTGGTAGCACCCCTCCTTCTTGGCTAGATGGAAGCCTTCCAGCAGACTTTGGCTTTGATCCTCTTGGATTTGGTTCGGACCCAGAAACATTGAGATGGATGGTACAATCAGAAATAGTACATTGCAGGTGGGCAATGTTAGGAGCAGCTGGTATTTTCATCCCTGAATTCTTAACCAAACTTGGCATCCTAAACACCCCTTCTTGGTACACTGCTGGTGAACTCGACTACTTCACCGACACCACCACCCTTTTCGTTGTCGAGTTGGTTTTGATTGGTTGGGCCGAAGGACGTAGATGGGCTGACATCCTTAAACCCGGTTGCGTCAACACCGACCCAATCTTCCCCAACAACAAGCTCACCGGTACCGATGTGGGCTACCCTGGTGGGCTTTGGTTTGACCCATTGGGCTGGGGTTCGGGCTCGCCACAAAAGGTTAAGGAGTTGAGGACTAAGGAGATCAAGAATGGTAGGTTGGCTATGTTGGCTGTTATGGGAGCTTGGTTCCAACACATTTACACTGGGACTGGCCCAATTGATAACCTCTTTGCTCATCTTGCTGATCCTGGCCATGCCACTATTTTTTCTGTAAGCTTTTACCCCCAAGTGATGAGAGCAGAGGAAGAAGCTAGAAATGTTGGTTGTTCTAGGATAAGAGGAATGGCAGATCTTGAATGGTTGTTTAGTGGTTGCACCTACGAAATGTTGGAGCTTTGTACAAATGCCTCTTGGATTTAA

Coding sequence (CDS)

ATGAGGAGCTGTATTTTGAGTGCACCTGATGGTTCTCTCATCAAAAAGCCCATTTGGGTTGATATCATTTCTACCAAAACACACAGCCAAAAATTCACAACAAATATGTCTTCTGTGTGTGCTTCTTCAGCCACCACAGCTGTTTGTGCTTCTTCTGCCAGTTCACAGAAGAAAGGAAATGTATTGGGAGCAACAAGAGCATCATTCCTAGGAGGAAAGAAGTTGAGAGACAGCAGCAAATACAGAACACCCGTTTCCTCAAACTCCTTCTCTGTCTCCGCAGCTGCAGCTGAACCAGAGAGGCCTATTTGGTTCCCTGGTAGCACCCCTCCTTCTTGGCTAGATGGAAGCCTTCCAGCAGACTTTGGCTTTGATCCTCTTGGATTTGGTTCGGACCCAGAAACATTGAGATGGATGGTACAATCAGAAATAGTACATTGCAGGTGGGCAATGTTAGGAGCAGCTGGTATTTTCATCCCTGAATTCTTAACCAAACTTGGCATCCTAAACACCCCTTCTTGGTACACTGCTGGTGAACTCGACTACTTCACCGACACCACCACCCTTTTCGTTGTCGAGTTGGTTTTGATTGGTTGGGCCGAAGGACGTAGATGGGCTGACATCCTTAAACCCGGTTGCGTCAACACCGACCCAATCTTCCCCAACAACAAGCTCACCGGTACCGATGTGGGCTACCCTGGTGGGCTTTGGTTTGACCCATTGGGCTGGGGTTCGGGCTCGCCACAAAAGGTTAAGGAGTTGAGGACTAAGGAGATCAAGAATGGTAGGTTGGCTATGTTGGCTGTTATGGGAGCTTGGTTCCAACACATTTACACTGGGACTGGCCCAATTGATAACCTCTTTGCTCATCTTGCTGATCCTGGCCATGCCACTATTTTTTCTGTAAGCTTTTACCCCCAAGTGATGAGAGCAGAGGAAGAAGCTAGAAATGTTGGTTGTTCTAGGATAAGAGGAATGGCAGATCTTGAATGGTTGTTTAGTGGTTGCACCTACGAAATGTTGGAGCTTTGTACAAATGCCTCTTGGATTTAA

Protein sequence

MRSCILSAPDGSLIKKPIWVDIISTKTHSQKFTTNMSSVCASSATTAVCASSASSQKKGNVLGATRASFLGGKKLRDSSKYRTPVSSNSFSVSAAAAEPERPIWFPGSTPPSWLDGSLPADFGFDPLGFGSDPETLRWMVQSEIVHCRWAMLGAAGIFIPEFLTKLGILNTPSWYTAGELDYFTDTTTLFVVELVLIGWAEGRRWADILKPGCVNTDPIFPNNKLTGTDVGYPGGLWFDPLGWGSGSPQKVKELRTKEIKNGRLAMLAVMGAWFQHIYTGTGPIDNLFAHLADPGHATIFSVSFYPQVMRAEEEARNVGCSRIRGMADLEWLFSGCTYEMLELCTNASWI

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
Spo14399	Spo14399	gene

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
Spo14399.1	Spo14399.1-protein	polypeptide

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Spo14399.1.exon.1	Spo14399.1.exon.1	exon
Spo14399.1.exon.2	Spo14399.1.exon.2	exon
Spo14399.1.exon.3	Spo14399.1.exon.3	exon
Spo14399.1.exon.4	Spo14399.1.exon.4	exon
Spo14399.1.exon.5	Spo14399.1.exon.5	exon
Spo14399.1.exon.6	Spo14399.1.exon.6	exon
Spo14399.1.exon.7	Spo14399.1.exon.7	exon

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Spo14399.1.CDS.1	Spo14399.1.CDS.1	CDS
Spo14399.1.CDS.2	Spo14399.1.CDS.2	CDS
Spo14399.1.CDS.3	Spo14399.1.CDS.3	CDS
Spo14399.1.CDS.4	Spo14399.1.CDS.4	CDS
Spo14399.1.CDS.5	Spo14399.1.CDS.5	CDS
Spo14399.1.CDS.6	Spo14399.1.CDS.6	CDS
Spo14399.1.CDS.7	Spo14399.1.CDS.7	CDS

Homology

[Close]

BLAST of Spo14399.1 vs. NCBI nr
Match: gi|902233476|gb|KNA23071.1| (hypothetical protein SOVF_028160 [Spinacia oleracea])

HSP 1 Score: 555.8 bits (1431), Expect = 5.300e-155
Identity = 268/272 (98.53%), Postives = 270/272 (99.26%), Query Frame = 1

		  
Query: 36  MSSVCASSATTAVCASSASSQKKGNVLGATRASFLGGKKLRDSSKYRTPVSSNSFSVSAA 95
           MSSVCASSATTAVCASSASSQKKGNVLGATRASFLGGKKLRDSSKYRTPVSSNSFSVSAA
Sbjct: 1   MSSVCASSATTAVCASSASSQKKGNVLGATRASFLGGKKLRDSSKYRTPVSSNSFSVSAA 60

Query: 96  AAEPERPIWFPGSTPPSWLDGSLPADFGFDPLGFGSDPETLRWMVQSEIVHCRWAMLGAA 155
           AAEPERPIWFPGSTPPSWLDGSLPADFGFDPLGFGSDPETLRWMVQSEIVHCRWAMLGAA
Sbjct: 61  AAEPERPIWFPGSTPPSWLDGSLPADFGFDPLGFGSDPETLRWMVQSEIVHCRWAMLGAA 120

Query: 156 GIFIPEFLTKLGILNTPSWYTAGELDYFTDTTTLFVVELVLIGWAEGRRWADILKPGCVN 215
           GIFIPEFLTKLGILNTPSWYTAGELDYFTDTTTLFVVELVLIGWAEGRRWADILKPGCVN
Sbjct: 121 GIFIPEFLTKLGILNTPSWYTAGELDYFTDTTTLFVVELVLIGWAEGRRWADILKPGCVN 180

Query: 216 TDPIFPNNKLTGTDVGYPGGLWFDPLGWGSGSPQKVKELRTKEIKNGRLAMLAVMGAWFQ 275
           TDPIFPNNKLTGTDVGYPGGLWFDPLGWGSGSPQKVKELRTKEIKNGRLAMLAVMGAWFQ
Sbjct: 181 TDPIFPNNKLTGTDVGYPGGLWFDPLGWGSGSPQKVKELRTKEIKNGRLAMLAVMGAWFQ 240

Query: 276 HIYTGTGPIDNLFAHLADPGHATIFSVSFYPQ 308
           HIYTGTGPIDNLFAHLADPGHATIFS +F P+
Sbjct: 241 HIYTGTGPIDNLFAHLADPGHATIFS-AFTPK 271

[Close]

BLAST of Spo14399.1 vs. NCBI nr
Match: gi|731317473|ref|XP_010669087.1| (PREDICTED: chlorophyll a-b binding protein, chloroplastic [Beta vulgaris subsp. vulgaris])

HSP 1 Score: 517.7 bits (1332), Expect = 1.600e-143
Identity = 243/272 (89.34%), Postives = 261/272 (95.96%), Query Frame = 1

		  
Query: 36  MSSVCASSATTAVCASSASSQKKGNVLGATRASFLGGKKLRDSSKYRTPVSSNSFSVSAA 95
           M+S+CASSA+TAVCASS SSQKKG+VLGAT+ASFLGGKKLRD+ KY+ P +S S SVSAA
Sbjct: 1   MASLCASSASTAVCASSHSSQKKGSVLGATKASFLGGKKLRDT-KYKAPTASKSLSVSAA 60

Query: 96  AAEPERPIWFPGSTPPSWLDGSLPADFGFDPLGFGSDPETLRWMVQSEIVHCRWAMLGAA 155
           AAEPERPIWFPGSTPP WLDGSLP DFGFDPLGFGSDPETL+WMVQSE+VHCRWAMLGAA
Sbjct: 61  AAEPERPIWFPGSTPPPWLDGSLPGDFGFDPLGFGSDPETLKWMVQSELVHCRWAMLGAA 120

Query: 156 GIFIPEFLTKLGILNTPSWYTAGELDYFTDTTTLFVVELVLIGWAEGRRWADILKPGCVN 215
           GIFIPEFLTKLGILNTPSWYTAGEL+YFTDTTTLF++E++LIGWAEGRRWADILKPGCVN
Sbjct: 121 GIFIPEFLTKLGILNTPSWYTAGELEYFTDTTTLFIIEMILIGWAEGRRWADILKPGCVN 180

Query: 216 TDPIFPNNKLTGTDVGYPGGLWFDPLGWGSGSPQKVKELRTKEIKNGRLAMLAVMGAWFQ 275
           TDPIFPNNKLTGTDVGYPGGLWFDPLGWGSGSPQK KELRTKEIKNGRLAMLAVMGAWFQ
Sbjct: 181 TDPIFPNNKLTGTDVGYPGGLWFDPLGWGSGSPQKTKELRTKEIKNGRLAMLAVMGAWFQ 240

Query: 276 HIYTGTGPIDNLFAHLADPGHATIFSVSFYPQ 308
           HIYTGTGPIDNLFAHLADPGHATIF+ +F P+
Sbjct: 241 HIYTGTGPIDNLFAHLADPGHATIFA-AFTPK 270

[Close]

BLAST of Spo14399.1 vs. NCBI nr
Match: gi|763748100|gb|KJB15539.1| (hypothetical protein B456_002G183400 [Gossypium raimondii])

HSP 1 Score: 487.6 bits (1254), Expect = 1.800e-134
Identity = 227/273 (83.15%), Postives = 247/273 (90.48%), Query Frame = 1

		  
Query: 36  MSSVCASSATTAVCASSASSQKKGNVLGATRASFLGGKKLRDSSKYRTPVSSNSFSVSAA 95
           M+SVCASSA  AV  SS SSQK G+V+G T+ASFL GKKLR   KY  P +  +F V  A
Sbjct: 1   MASVCASSAIAAVAISSPSSQKTGSVVGTTKASFLTGKKLRSVRKYTKPAAGPTFPV-CA 60

Query: 96  AAEPERPIWFPGSTPPSWLDGSLPADFGFDPLGFGSDPETLRWMVQSEIVHCRWAMLGAA 155
           AA+P+RP+WFPGSTPP WLDGSLP DFGFDPLG GSDPETLRW VQ+E+VHCRWAMLGAA
Sbjct: 61  AADPDRPLWFPGSTPPPWLDGSLPGDFGFDPLGLGSDPETLRWNVQAELVHCRWAMLGAA 120

Query: 156 GIFIPEFLTKLGILNTPSWYTAGELDYFTDTTTLFVVELVLIGWAEGRRWADILKPGCVN 215
           GIFIPEFLTK+GILNTPSWY+AG  +YFTDTTTLF+VEL+ IGWAEGRRWADILKPGCVN
Sbjct: 121 GIFIPEFLTKIGILNTPSWYSAGTEEYFTDTTTLFIVELIFIGWAEGRRWADILKPGCVN 180

Query: 216 TDPIFPNNKLTGTDVGYPGGLWFDPLGWGSGSPQKVKELRTKEIKNGRLAMLAVMGAWFQ 275
           TDPIFPNNKLTGTDVGYPGGLWFDPLGWGSGSP+K+KELRTKEIKNGRLAMLAVMGAWFQ
Sbjct: 181 TDPIFPNNKLTGTDVGYPGGLWFDPLGWGSGSPEKIKELRTKEIKNGRLAMLAVMGAWFQ 240

Query: 276 HIYTGTGPIDNLFAHLADPGHATIFSVSFYPQV 309
           HIYTGTGPIDNLFAHLADPGHATIF+VSF+PQV
Sbjct: 241 HIYTGTGPIDNLFAHLADPGHATIFAVSFHPQV 272

[Close]

BLAST of Spo14399.1 vs. NCBI nr
Match: gi|763748101|gb|KJB15540.1| (hypothetical protein B456_002G183400 [Gossypium raimondii])

HSP 1 Score: 479.6 bits (1233), Expect = 4.800e-132
Identity = 224/271 (82.66%), Postives = 243/271 (89.67%), Query Frame = 1

		  
Query: 36  MSSVCASSATTAVCASSASSQKKGNVLGATRASFLGGKKLRDSSKYRTPVSSNSFSVSAA 95
           M+SVCASSA  AV  SS SSQK G+V+G T+ASFL GKKLR   KY  P +  +F V  A
Sbjct: 1   MASVCASSAIAAVAISSPSSQKTGSVVGTTKASFLTGKKLRSVRKYTKPAAGPTFPV-CA 60

Query: 96  AAEPERPIWFPGSTPPSWLDGSLPADFGFDPLGFGSDPETLRWMVQSEIVHCRWAMLGAA 155
           AA+P+RP+WFPGSTPP WLDGSLP DFGFDPLG GSDPETLRW VQ+E+VHCRWAMLGAA
Sbjct: 61  AADPDRPLWFPGSTPPPWLDGSLPGDFGFDPLGLGSDPETLRWNVQAELVHCRWAMLGAA 120

Query: 156 GIFIPEFLTKLGILNTPSWYTAGELDYFTDTTTLFVVELVLIGWAEGRRWADILKPGCVN 215
           GIFIPEFLTK+GILNTPSWY+AG  +YFTDTTTLF+VEL+ IGWAEGRRWADILKPGCVN
Sbjct: 121 GIFIPEFLTKIGILNTPSWYSAGTEEYFTDTTTLFIVELIFIGWAEGRRWADILKPGCVN 180

Query: 216 TDPIFPNNKLTGTDVGYPGGLWFDPLGWGSGSPQKVKELRTKEIKNGRLAMLAVMGAWFQ 275
           TDPIFPNNKLTGTDVGYPGGLWFDPLGWGSGSP+K+KELRTKEIKNGRLAMLAVMGAWFQ
Sbjct: 181 TDPIFPNNKLTGTDVGYPGGLWFDPLGWGSGSPEKIKELRTKEIKNGRLAMLAVMGAWFQ 240

Query: 276 HIYTGTGPIDNLFAHLADPGHATIFSVSFYP 307
           HIYTGTGPIDNLFAHLADPGHATIF+VS  P
Sbjct: 241 HIYTGTGPIDNLFAHLADPGHATIFAVSSTP 270

[Close]

BLAST of Spo14399.1 vs. NCBI nr
Match: gi|698480194|ref|XP_009787153.1| (PREDICTED: chlorophyll a-b binding protein, chloroplastic [Nicotiana sylvestris])

HSP 1 Score: 477.2 bits (1227), Expect = 2.400e-131
Identity = 223/272 (81.99%), Postives = 247/272 (90.81%), Query Frame = 1

		  
Query: 36  MSSVCASSATTAVCASSASSQKKGNVLGATRASFLGGKKLRDSSKYRTPVSSNSFSVSAA 95
           M+S CASSA  AV  SS SSQK G+++GAT+ASFLGGK+LR  SK+  P  S S +VSA 
Sbjct: 1   MASACASSAIAAVAFSSPSSQKNGSIVGATKASFLGGKRLR-VSKHVAPAGSRSVAVSAV 60

Query: 96  AAEPERPIWFPGSTPPSWLDGSLPADFGFDPLGFGSDPETLRWMVQSEIVHCRWAMLGAA 155
           AA+P+RP+WFPGSTPP WLDGSLP DFGFDPLG  SDPE+L+W  Q+E+VHCRWAMLGAA
Sbjct: 61  AADPDRPLWFPGSTPPPWLDGSLPGDFGFDPLGLASDPESLKWNQQAELVHCRWAMLGAA 120

Query: 156 GIFIPEFLTKLGILNTPSWYTAGELDYFTDTTTLFVVELVLIGWAEGRRWADILKPGCVN 215
           GIFIPEFLTK+GILNTPSWYTAGE +YFTDTTTLFV+ELVLIGWAEGRRWADI+KPGCVN
Sbjct: 121 GIFIPEFLTKIGILNTPSWYTAGEQEYFTDTTTLFVIELVLIGWAEGRRWADIIKPGCVN 180

Query: 216 TDPIFPNNKLTGTDVGYPGGLWFDPLGWGSGSPQKVKELRTKEIKNGRLAMLAVMGAWFQ 275
           TDPIFPNNKLTGTDVGYPGGLWFDPLGWGSGSP+K+KELRTKEIKNGRLAMLAVMGAWFQ
Sbjct: 181 TDPIFPNNKLTGTDVGYPGGLWFDPLGWGSGSPEKIKELRTKEIKNGRLAMLAVMGAWFQ 240

Query: 276 HIYTGTGPIDNLFAHLADPGHATIFSVSFYPQ 308
           HIYTGTGPIDNLFAHLADPGHATIF+ +F P+
Sbjct: 241 HIYTGTGPIDNLFAHLADPGHATIFA-AFSPK 270

[Close]

BLAST of Spo14399.1 vs. UniProtKB/TrEMBL
Match: A0A0K9RU56_SPIOL (Chlorophyll a-b binding protein, chloroplastic OS=Spinacia oleracea GN=SOVF_028160 PE=3 SV=1)

HSP 1 Score: 555.8 bits (1431), Expect = 3.700e-155
Identity = 268/272 (98.53%), Postives = 270/272 (99.26%), Query Frame = 1

		  
Query: 36  MSSVCASSATTAVCASSASSQKKGNVLGATRASFLGGKKLRDSSKYRTPVSSNSFSVSAA 95
           MSSVCASSATTAVCASSASSQKKGNVLGATRASFLGGKKLRDSSKYRTPVSSNSFSVSAA
Sbjct: 1   MSSVCASSATTAVCASSASSQKKGNVLGATRASFLGGKKLRDSSKYRTPVSSNSFSVSAA 60

Query: 96  AAEPERPIWFPGSTPPSWLDGSLPADFGFDPLGFGSDPETLRWMVQSEIVHCRWAMLGAA 155
           AAEPERPIWFPGSTPPSWLDGSLPADFGFDPLGFGSDPETLRWMVQSEIVHCRWAMLGAA
Sbjct: 61  AAEPERPIWFPGSTPPSWLDGSLPADFGFDPLGFGSDPETLRWMVQSEIVHCRWAMLGAA 120

Query: 156 GIFIPEFLTKLGILNTPSWYTAGELDYFTDTTTLFVVELVLIGWAEGRRWADILKPGCVN 215
           GIFIPEFLTKLGILNTPSWYTAGELDYFTDTTTLFVVELVLIGWAEGRRWADILKPGCVN
Sbjct: 121 GIFIPEFLTKLGILNTPSWYTAGELDYFTDTTTLFVVELVLIGWAEGRRWADILKPGCVN 180

Query: 216 TDPIFPNNKLTGTDVGYPGGLWFDPLGWGSGSPQKVKELRTKEIKNGRLAMLAVMGAWFQ 275
           TDPIFPNNKLTGTDVGYPGGLWFDPLGWGSGSPQKVKELRTKEIKNGRLAMLAVMGAWFQ
Sbjct: 181 TDPIFPNNKLTGTDVGYPGGLWFDPLGWGSGSPQKVKELRTKEIKNGRLAMLAVMGAWFQ 240

Query: 276 HIYTGTGPIDNLFAHLADPGHATIFSVSFYPQ 308
           HIYTGTGPIDNLFAHLADPGHATIFS +F P+
Sbjct: 241 HIYTGTGPIDNLFAHLADPGHATIFS-AFTPK 271

[Close]

BLAST of Spo14399.1 vs. UniProtKB/TrEMBL
Match: A0A0J8CWG9_BETVU (Chlorophyll a-b binding protein, chloroplastic OS=Beta vulgaris subsp. vulgaris GN=BVRB_2g033010 PE=3 SV=1)

HSP 1 Score: 517.7 bits (1332), Expect = 1.100e-143
Identity = 243/272 (89.34%), Postives = 261/272 (95.96%), Query Frame = 1

		  
Query: 36  MSSVCASSATTAVCASSASSQKKGNVLGATRASFLGGKKLRDSSKYRTPVSSNSFSVSAA 95
           M+S+CASSA+TAVCASS SSQKKG+VLGAT+ASFLGGKKLRD+ KY+ P +S S SVSAA
Sbjct: 1   MASLCASSASTAVCASSHSSQKKGSVLGATKASFLGGKKLRDT-KYKAPTASKSLSVSAA 60

Query: 96  AAEPERPIWFPGSTPPSWLDGSLPADFGFDPLGFGSDPETLRWMVQSEIVHCRWAMLGAA 155
           AAEPERPIWFPGSTPP WLDGSLP DFGFDPLGFGSDPETL+WMVQSE+VHCRWAMLGAA
Sbjct: 61  AAEPERPIWFPGSTPPPWLDGSLPGDFGFDPLGFGSDPETLKWMVQSELVHCRWAMLGAA 120

Query: 156 GIFIPEFLTKLGILNTPSWYTAGELDYFTDTTTLFVVELVLIGWAEGRRWADILKPGCVN 215
           GIFIPEFLTKLGILNTPSWYTAGEL+YFTDTTTLF++E++LIGWAEGRRWADILKPGCVN
Sbjct: 121 GIFIPEFLTKLGILNTPSWYTAGELEYFTDTTTLFIIEMILIGWAEGRRWADILKPGCVN 180

Query: 216 TDPIFPNNKLTGTDVGYPGGLWFDPLGWGSGSPQKVKELRTKEIKNGRLAMLAVMGAWFQ 275
           TDPIFPNNKLTGTDVGYPGGLWFDPLGWGSGSPQK KELRTKEIKNGRLAMLAVMGAWFQ
Sbjct: 181 TDPIFPNNKLTGTDVGYPGGLWFDPLGWGSGSPQKTKELRTKEIKNGRLAMLAVMGAWFQ 240

Query: 276 HIYTGTGPIDNLFAHLADPGHATIFSVSFYPQ 308
           HIYTGTGPIDNLFAHLADPGHATIF+ +F P+
Sbjct: 241 HIYTGTGPIDNLFAHLADPGHATIFA-AFTPK 270

[Close]

BLAST of Spo14399.1 vs. UniProtKB/TrEMBL
Match: A0A0D2Q8H6_GOSRA (Chlorophyll a-b binding protein, chloroplastic OS=Gossypium raimondii GN=B456_002G183400 PE=3 SV=1)

HSP 1 Score: 487.6 bits (1254), Expect = 1.200e-134
Identity = 227/273 (83.15%), Postives = 247/273 (90.48%), Query Frame = 1

		  
Query: 36  MSSVCASSATTAVCASSASSQKKGNVLGATRASFLGGKKLRDSSKYRTPVSSNSFSVSAA 95
           M+SVCASSA  AV  SS SSQK G+V+G T+ASFL GKKLR   KY  P +  +F V  A
Sbjct: 1   MASVCASSAIAAVAISSPSSQKTGSVVGTTKASFLTGKKLRSVRKYTKPAAGPTFPV-CA 60

Query: 96  AAEPERPIWFPGSTPPSWLDGSLPADFGFDPLGFGSDPETLRWMVQSEIVHCRWAMLGAA 155
           AA+P+RP+WFPGSTPP WLDGSLP DFGFDPLG GSDPETLRW VQ+E+VHCRWAMLGAA
Sbjct: 61  AADPDRPLWFPGSTPPPWLDGSLPGDFGFDPLGLGSDPETLRWNVQAELVHCRWAMLGAA 120

Query: 156 GIFIPEFLTKLGILNTPSWYTAGELDYFTDTTTLFVVELVLIGWAEGRRWADILKPGCVN 215
           GIFIPEFLTK+GILNTPSWY+AG  +YFTDTTTLF+VEL+ IGWAEGRRWADILKPGCVN
Sbjct: 121 GIFIPEFLTKIGILNTPSWYSAGTEEYFTDTTTLFIVELIFIGWAEGRRWADILKPGCVN 180

Query: 216 TDPIFPNNKLTGTDVGYPGGLWFDPLGWGSGSPQKVKELRTKEIKNGRLAMLAVMGAWFQ 275
           TDPIFPNNKLTGTDVGYPGGLWFDPLGWGSGSP+K+KELRTKEIKNGRLAMLAVMGAWFQ
Sbjct: 181 TDPIFPNNKLTGTDVGYPGGLWFDPLGWGSGSPEKIKELRTKEIKNGRLAMLAVMGAWFQ 240

Query: 276 HIYTGTGPIDNLFAHLADPGHATIFSVSFYPQV 309
           HIYTGTGPIDNLFAHLADPGHATIF+VSF+PQV
Sbjct: 241 HIYTGTGPIDNLFAHLADPGHATIFAVSFHPQV 272

[Close]

BLAST of Spo14399.1 vs. UniProtKB/TrEMBL
Match: A0A0D2R8N0_GOSRA (Chlorophyll a-b binding protein, chloroplastic OS=Gossypium raimondii GN=B456_002G183400 PE=3 SV=1)

HSP 1 Score: 479.6 bits (1233), Expect = 3.300e-132
Identity = 224/271 (82.66%), Postives = 243/271 (89.67%), Query Frame = 1

		  
Query: 36  MSSVCASSATTAVCASSASSQKKGNVLGATRASFLGGKKLRDSSKYRTPVSSNSFSVSAA 95
           M+SVCASSA  AV  SS SSQK G+V+G T+ASFL GKKLR   KY  P +  +F V  A
Sbjct: 1   MASVCASSAIAAVAISSPSSQKTGSVVGTTKASFLTGKKLRSVRKYTKPAAGPTFPV-CA 60

Query: 96  AAEPERPIWFPGSTPPSWLDGSLPADFGFDPLGFGSDPETLRWMVQSEIVHCRWAMLGAA 155
           AA+P+RP+WFPGSTPP WLDGSLP DFGFDPLG GSDPETLRW VQ+E+VHCRWAMLGAA
Sbjct: 61  AADPDRPLWFPGSTPPPWLDGSLPGDFGFDPLGLGSDPETLRWNVQAELVHCRWAMLGAA 120

Query: 156 GIFIPEFLTKLGILNTPSWYTAGELDYFTDTTTLFVVELVLIGWAEGRRWADILKPGCVN 215
           GIFIPEFLTK+GILNTPSWY+AG  +YFTDTTTLF+VEL+ IGWAEGRRWADILKPGCVN
Sbjct: 121 GIFIPEFLTKIGILNTPSWYSAGTEEYFTDTTTLFIVELIFIGWAEGRRWADILKPGCVN 180

Query: 216 TDPIFPNNKLTGTDVGYPGGLWFDPLGWGSGSPQKVKELRTKEIKNGRLAMLAVMGAWFQ 275
           TDPIFPNNKLTGTDVGYPGGLWFDPLGWGSGSP+K+KELRTKEIKNGRLAMLAVMGAWFQ
Sbjct: 181 TDPIFPNNKLTGTDVGYPGGLWFDPLGWGSGSPEKIKELRTKEIKNGRLAMLAVMGAWFQ 240

Query: 276 HIYTGTGPIDNLFAHLADPGHATIFSVSFYP 307
           HIYTGTGPIDNLFAHLADPGHATIF+VS  P
Sbjct: 241 HIYTGTGPIDNLFAHLADPGHATIFAVSSTP 270

[Close]

BLAST of Spo14399.1 vs. UniProtKB/TrEMBL
Match: D7TAY3_VITVI (Chlorophyll a-b binding protein, chloroplastic OS=Vitis vinifera GN=VIT_01s0010g03620 PE=3 SV=1)

HSP 1 Score: 476.5 bits (1225), Expect = 2.800e-131
Identity = 225/273 (82.42%), Postives = 247/273 (90.48%), Query Frame = 1

		  
Query: 36  MSSVCASSATTAVCASSASSQKKGNVLGATRASFLGGKKLRDSSKYRTPVS-SNSFSVSA 95
           M+SVCASSA  AV   S SSQK G+V+GAT+ASFLGGK+L    K+  P + + SF+VSA
Sbjct: 1   MASVCASSAMAAVATISPSSQKTGSVVGATKASFLGGKRL-SLKKFTAPAAGTRSFTVSA 60

Query: 96  AAAEPERPIWFPGSTPPSWLDGSLPADFGFDPLGFGSDPETLRWMVQSEIVHCRWAMLGA 155
           AAA+P RP+WFPGSTPP WLDGSLP DFGFDPLG GSDPETL+WMVQSEIVHCRWAMLGA
Sbjct: 61  AAADPNRPLWFPGSTPPPWLDGSLPGDFGFDPLGLGSDPETLKWMVQSEIVHCRWAMLGA 120

Query: 156 AGIFIPEFLTKLGILNTPSWYTAGELDYFTDTTTLFVVELVLIGWAEGRRWADILKPGCV 215
           AGIFIPEFLTK+GILNTPSWYTAGEL+YFTD TTLF+VE++ IGWAEGRRWADI+KPGCV
Sbjct: 121 AGIFIPEFLTKIGILNTPSWYTAGELEYFTDKTTLFIVEMIFIGWAEGRRWADIIKPGCV 180

Query: 216 NTDPIFPNNKLTGTDVGYPGGLWFDPLGWGSGSPQKVKELRTKEIKNGRLAMLAVMGAWF 275
           NTDPIFPNNKLTGTDVGYPGGLWFDPLGWGSGSP K+KELRTKEIKNGRLAMLAVMGAWF
Sbjct: 181 NTDPIFPNNKLTGTDVGYPGGLWFDPLGWGSGSPDKIKELRTKEIKNGRLAMLAVMGAWF 240

Query: 276 QHIYTGTGPIDNLFAHLADPGHATIFSVSFYPQ 308
           Q IYTGTGPIDNLFAHLADPGHATIF+ +F P+
Sbjct: 241 QAIYTGTGPIDNLFAHLADPGHATIFA-AFTPK 271

[Close]

BLAST of Spo14399.1 vs. ExPASy Swiss-Prot
Match: CB12_PETHY (Chlorophyll a-b binding protein, chloroplastic OS=Petunia hybrida PE=2 SV=1)

HSP 1 Score: 475.7 bits (1223), Expect = 4.300e-133
Identity = 222/272 (81.62%), Postives = 246/272 (90.44%), Query Frame = 1

		  
Query: 36  MSSVCASSATTAVCASSASSQKKGNVLGATRASFLGGKKLRDSSKYRTPVSSNSFSVSAA 95
           M+S CASS   AV  SS SSQK G+++GAT+ASFLGGK+LR  SK+  PV S S +VSA 
Sbjct: 1   MASACASSTIAAVAFSSPSSQKNGSIVGATKASFLGGKRLR-VSKFIAPVGSRSVAVSAV 60

Query: 96  AAEPERPIWFPGSTPPSWLDGSLPADFGFDPLGFGSDPETLRWMVQSEIVHCRWAMLGAA 155
           AA+P+RP+WFPGSTPP WLDGSLP DFGFDPLG GSDPE+L+W  Q+E+VH RWAMLGAA
Sbjct: 61  AADPDRPLWFPGSTPPEWLDGSLPGDFGFDPLGLGSDPESLKWNAQAELVHSRWAMLGAA 120

Query: 156 GIFIPEFLTKLGILNTPSWYTAGELDYFTDTTTLFVVELVLIGWAEGRRWADILKPGCVN 215
           GIFIPEFLTK+G+LNTPSWYTAGE +YFTDTTTLFV+ELVLIGWAEGRRWADI+KPGCVN
Sbjct: 121 GIFIPEFLTKIGVLNTPSWYTAGEQEYFTDTTTLFVIELVLIGWAEGRRWADIIKPGCVN 180

Query: 216 TDPIFPNNKLTGTDVGYPGGLWFDPLGWGSGSPQKVKELRTKEIKNGRLAMLAVMGAWFQ 275
           TDPIFPNNKLTGTDVGYPGGLWFDPLGWGSGSP K+KELRTKEIKNGRLAMLAVMGAWFQ
Sbjct: 181 TDPIFPNNKLTGTDVGYPGGLWFDPLGWGSGSPAKIKELRTKEIKNGRLAMLAVMGAWFQ 240

Query: 276 HIYTGTGPIDNLFAHLADPGHATIFSVSFYPQ 308
           HIYTGTGPIDNLFAHLADPGHATIF+ +F P+
Sbjct: 241 HIYTGTGPIDNLFAHLADPGHATIFA-AFSPK 270

[Close]

BLAST of Spo14399.1 vs. ExPASy Swiss-Prot
Match: CB12_SOLLC (Chlorophyll a-b binding protein 7, chloroplastic OS=Solanum lycopersicum GN=CAB7 PE=3 SV=1)

HSP 1 Score: 462.2 bits (1188), Expect = 5.000e-129
Identity = 215/272 (79.04%), Postives = 241/272 (88.60%), Query Frame = 1

		  
Query: 36  MSSVCASSATTAVCASSASSQKKGNVLGATRASFLGGKKLRDSSKYRTPVSSNSFSVSAA 95
           M+S CASS   AV  SS SS++ G+++G T+ASFLGG++LR  SKY T  ++ S +    
Sbjct: 1   MASACASSTIAAVAFSSPSSRRNGSIVGTTKASFLGGRRLR-VSKYSTTPTARSATTVCV 60

Query: 96  AAEPERPIWFPGSTPPSWLDGSLPADFGFDPLGFGSDPETLRWMVQSEIVHCRWAMLGAA 155
           AA+P+RP+WFPGSTPP WLDGSLP DFGFDPLG  SDPE+LRW  Q+E+VHCRWAMLGAA
Sbjct: 61  AADPDRPLWFPGSTPPPWLDGSLPGDFGFDPLGLASDPESLRWNQQAELVHCRWAMLGAA 120

Query: 156 GIFIPEFLTKLGILNTPSWYTAGELDYFTDTTTLFVVELVLIGWAEGRRWADILKPGCVN 215
           GIFIPE LTK+GILNTPSWYTAGE +YFTDTTTLF+VELVLIGWAEGRRWADI+KPGCVN
Sbjct: 121 GIFIPELLTKIGILNTPSWYTAGEQEYFTDTTTLFIVELVLIGWAEGRRWADIIKPGCVN 180

Query: 216 TDPIFPNNKLTGTDVGYPGGLWFDPLGWGSGSPQKVKELRTKEIKNGRLAMLAVMGAWFQ 275
           TDPIFPNNKLTGTDVGYPGGLWFDPLGWGSGSP K+KELRTKEIKNGRLAMLAVMGAWFQ
Sbjct: 181 TDPIFPNNKLTGTDVGYPGGLWFDPLGWGSGSPAKIKELRTKEIKNGRLAMLAVMGAWFQ 240

Query: 276 HIYTGTGPIDNLFAHLADPGHATIFSVSFYPQ 308
           HIYTGTGPIDNLFAHLADPGHATIF+ +F P+
Sbjct: 241 HIYTGTGPIDNLFAHLADPGHATIFA-AFSPK 270

[Close]

BLAST of Spo14399.1 vs. ExPASy Swiss-Prot
Match: LHCA2_ARATH (Photosystem I chlorophyll a/b-binding protein 2, chloroplastic OS=Arabidopsis thaliana GN=LHCA2 PE=1 SV=1)

HSP 1 Score: 437.2 bits (1123), Expect = 1.700e-121
Identity = 210/272 (77.21%), Postives = 228/272 (83.82%), Query Frame = 1

		  
Query: 37  SSVCASSATTAVCASSASSQKKGNVLGATRASFLGGKKLRDSSKYRTP-VSSNSFSVSAA 96
           SS+CASSA  A+ + S                FLGGKKLR   K   P VS    SV A 
Sbjct: 3   SSLCASSAIAAISSPS----------------FLGGKKLRLKKKLTVPAVSRPDASVRAV 62

Query: 97  AAEPERPIWFPGSTPPSWLDGSLPADFGFDPLGFGSDPETLRWMVQSEIVHCRWAMLGAA 156
           AA+P+RPIWFPGSTPP WLDGSLP DFGFDPLG  SDP++L+W VQ+EIVHCRWAMLGAA
Sbjct: 63  AADPDRPIWFPGSTPPEWLDGSLPGDFGFDPLGLSSDPDSLKWNVQAEIVHCRWAMLGAA 122

Query: 157 GIFIPEFLTKLGILNTPSWYTAGELDYFTDTTTLFVVELVLIGWAEGRRWADILKPGCVN 216
           GIFIPEFLTK+GILNTPSWYTAGE +YFTD TTLFVVEL+LIGWAEGRRWADI+KPG VN
Sbjct: 123 GIFIPEFLTKIGILNTPSWYTAGEQEYFTDKTTLFVVELILIGWAEGRRWADIIKPGSVN 182

Query: 217 TDPIFPNNKLTGTDVGYPGGLWFDPLGWGSGSPQKVKELRTKEIKNGRLAMLAVMGAWFQ 276
           TDP+FPNNKLTGTDVGYPGGLWFDPLGWGSGSP K+KELRTKEIKNGRLAMLAVMGAWFQ
Sbjct: 183 TDPVFPNNKLTGTDVGYPGGLWFDPLGWGSGSPAKLKELRTKEIKNGRLAMLAVMGAWFQ 242

Query: 277 HIYTGTGPIDNLFAHLADPGHATIFSVSFYPQ 308
           HIYTGTGPIDNLFAHLADPGHATIF+ +F P+
Sbjct: 243 HIYTGTGPIDNLFAHLADPGHATIFA-AFTPK 257

[Close]

BLAST of Spo14399.1 vs. ExPASy Swiss-Prot
Match: LHCA6_ARATH (Photosystem I chlorophyll a/b-binding protein 6, chloroplastic OS=Arabidopsis thaliana GN=LHCA6 PE=1 SV=1)

HSP 1 Score: 297.0 bits (759), Expect = 2.800e-79
Identity = 143/268 (53.36%), Postives = 181/268 (67.54%), Query Frame = 1

		  
Query: 36  MSSVCASSATTAVCASSASSQKKGNVLGATRASFLGGKKLRDSSKYRTPVSSNSFSVSAA 95
           ++S   S+ T +       +Q++ +V      S  GG+ +R+    R  V      VS+ 
Sbjct: 5   IASALTSTLTLSTSRVQNPTQRRPHVAST---SSTGGRLMRE----RLVVVRAGKEVSSV 64

Query: 96  AAE--PERPIWFPGSTPPSWLDGSLPADFGFDPLGFGSDPETLRWMVQSEIVHCRWAMLG 155
                P+RP+WFPGS+PP WLDGSLP DFGFDPLG GSDP+TL+W  Q+E++H RWAML 
Sbjct: 65  CEPLPPDRPLWFPGSSPPEWLDGSLPGDFGFDPLGLGSDPDTLKWFAQAELIHSRWAMLA 124

Query: 156 AAGIFIPEFLTKLGILNTPSWYTAGELDYFTDTTTLFVVELVLIGWAEGRRWADILKPGC 215
             GI IPE L +LG +   SWY AG  +YF D+TTLFV ++VL+GWAEGRRWAD++KPG 
Sbjct: 125 VTGIIIPECLERLGFIENFSWYDAGSREYFADSTTLFVAQMVLMGWAEGRRWADLIKPGS 184

Query: 216 VNTDPIFPNNKLTGTDVGYPGGLWFDPLGWGSGSPQKVKELRTKEIKNGRLAMLAVMGAW 275
           V+ +P +P+      DVGYPGGLWFD + WG GSP+ V  LRTKEIKNGRLAMLA +G  
Sbjct: 185 VDIEPKYPHKVNPKPDVGYPGGLWFDFMMWGRGSPEPVMVLRTKEIKNGRLAMLAFLGFC 244

Query: 276 FQHIYTGTGPIDNLFAHLADPGHATIFS 302
           FQ  YT   PI+NL AHLADPGH  +FS
Sbjct: 245 FQATYTSQDPIENLMAHLADPGHCNVFS 265

[Close]

BLAST of Spo14399.1 vs. ExPASy Swiss-Prot
Match: CB24_PEA (Chlorophyll a-b binding protein P4, chloroplastic OS=Pisum sativum GN=lhcA-P4 PE=1 SV=1)

HSP 1 Score: 227.6 bits (579), Expect = 2.100e-58
Identity = 119/253 (47.04%), Postives = 151/253 (59.68%), Query Frame = 1

		  
Query: 51  SSASSQKKGNVLG--ATRASFLGGK--KLRDSSKYRTPVSSNSFSVSAAAAEPERPIWFP 110
           ++ ++Q    + G    ++ FLGG   KL     +R    S S S    A + E   W P
Sbjct: 2   ATVTTQASAAIFGPCGLKSRFLGGSSGKLNRGVAFRPVGCSPSASFKVEAKKGE---WLP 61

Query: 111 GSTPPSWLDGSLPADFGFDPLGFGSDPETLRWMVQSEIVHCRWAMLGAAGIFIPEFLTKL 170
           G   P +L GSLP D GFDPLG   DPE LRW VQ+E+V+ RWAMLG AG+ +PE  T +
Sbjct: 62  GLASPGYLTGSLPGDNGFDPLGLAEDPENLRWFVQAELVNGRWAMLGVAGMLLPEVFTSI 121

Query: 171 GILNTPSWYTAGELDYFTDTTTLFVVELVLIGWAEGRRWADILKPGCVNTDPIFPNNKLT 230
           GI+N P WY AG+ +YF  ++TLFV+E +L  + E RRW DI  PG VN DPIF    L 
Sbjct: 122 GIINVPKWYAAGKEEYFASSSTLFVIEFILSHYVEIRRWQDIKNPGSVNQDPIFKQYSLP 181

Query: 231 GTDVGYPGGLWFDPLGWGSGSPQKVKELRTKEIKNGRLAMLAVMGAWFQHIYTGTGPIDN 290
             +VGYPGG+ F+PL +         E + KEI NGRLAMLA +G   QH  TG GP DN
Sbjct: 182 AGEVGYPGGI-FNPLNFA-----PTLEAKEKEIANGRLAMLAFLGFIIQHNVTGKGPFDN 241

Query: 291 LFAHLADPGHATI 300
           L  H++DP H TI
Sbjct: 242 LLQHISDPWHNTI 245

[Close]

BLAST of Spo14399.1 vs. TAIR (Arabidopsis)
Match: AT3G61470.1 (photosystem I light harvesting complex gene 2)

HSP 1 Score: 437.2 bits (1123), Expect = 9.600e-123
Identity = 210/272 (77.21%), Postives = 228/272 (83.82%), Query Frame = 1

		  
Query: 37  SSVCASSATTAVCASSASSQKKGNVLGATRASFLGGKKLRDSSKYRTP-VSSNSFSVSAA 96
           SS+CASSA  A+ + S                FLGGKKLR   K   P VS    SV A 
Sbjct: 3   SSLCASSAIAAISSPS----------------FLGGKKLRLKKKLTVPAVSRPDASVRAV 62

Query: 97  AAEPERPIWFPGSTPPSWLDGSLPADFGFDPLGFGSDPETLRWMVQSEIVHCRWAMLGAA 156
           AA+P+RPIWFPGSTPP WLDGSLP DFGFDPLG  SDP++L+W VQ+EIVHCRWAMLGAA
Sbjct: 63  AADPDRPIWFPGSTPPEWLDGSLPGDFGFDPLGLSSDPDSLKWNVQAEIVHCRWAMLGAA 122

Query: 157 GIFIPEFLTKLGILNTPSWYTAGELDYFTDTTTLFVVELVLIGWAEGRRWADILKPGCVN 216
           GIFIPEFLTK+GILNTPSWYTAGE +YFTD TTLFVVEL+LIGWAEGRRWADI+KPG VN
Sbjct: 123 GIFIPEFLTKIGILNTPSWYTAGEQEYFTDKTTLFVVELILIGWAEGRRWADIIKPGSVN 182

Query: 217 TDPIFPNNKLTGTDVGYPGGLWFDPLGWGSGSPQKVKELRTKEIKNGRLAMLAVMGAWFQ 276
           TDP+FPNNKLTGTDVGYPGGLWFDPLGWGSGSP K+KELRTKEIKNGRLAMLAVMGAWFQ
Sbjct: 183 TDPVFPNNKLTGTDVGYPGGLWFDPLGWGSGSPAKLKELRTKEIKNGRLAMLAVMGAWFQ 242

Query: 277 HIYTGTGPIDNLFAHLADPGHATIFSVSFYPQ 308
           HIYTGTGPIDNLFAHLADPGHATIF+ +F P+
Sbjct: 243 HIYTGTGPIDNLFAHLADPGHATIFA-AFTPK 257

[Close]

BLAST of Spo14399.1 vs. TAIR (Arabidopsis)
Match: AT1G19150.1 (photosystem I light harvesting complex gene 6)

HSP 1 Score: 297.0 bits (759), Expect = 1.600e-80
Identity = 143/268 (53.36%), Postives = 181/268 (67.54%), Query Frame = 1

		  
Query: 36  MSSVCASSATTAVCASSASSQKKGNVLGATRASFLGGKKLRDSSKYRTPVSSNSFSVSAA 95
           ++S   S+ T +       +Q++ +V      S  GG+ +R+    R  V      VS+ 
Sbjct: 5   IASALTSTLTLSTSRVQNPTQRRPHVAST---SSTGGRLMRE----RLVVVRAGKEVSSV 64

Query: 96  AAE--PERPIWFPGSTPPSWLDGSLPADFGFDPLGFGSDPETLRWMVQSEIVHCRWAMLG 155
                P+RP+WFPGS+PP WLDGSLP DFGFDPLG GSDP+TL+W  Q+E++H RWAML 
Sbjct: 65  CEPLPPDRPLWFPGSSPPEWLDGSLPGDFGFDPLGLGSDPDTLKWFAQAELIHSRWAMLA 124

Query: 156 AAGIFIPEFLTKLGILNTPSWYTAGELDYFTDTTTLFVVELVLIGWAEGRRWADILKPGC 215
             GI IPE L +LG +   SWY AG  +YF D+TTLFV ++VL+GWAEGRRWAD++KPG 
Sbjct: 125 VTGIIIPECLERLGFIENFSWYDAGSREYFADSTTLFVAQMVLMGWAEGRRWADLIKPGS 184

Query: 216 VNTDPIFPNNKLTGTDVGYPGGLWFDPLGWGSGSPQKVKELRTKEIKNGRLAMLAVMGAW 275
           V+ +P +P+      DVGYPGGLWFD + WG GSP+ V  LRTKEIKNGRLAMLA +G  
Sbjct: 185 VDIEPKYPHKVNPKPDVGYPGGLWFDFMMWGRGSPEPVMVLRTKEIKNGRLAMLAFLGFC 244

Query: 276 FQHIYTGTGPIDNLFAHLADPGHATIFS 302
           FQ  YT   PI+NL AHLADPGH  +FS
Sbjct: 245 FQATYTSQDPIENLMAHLADPGHCNVFS 265

[Close]

BLAST of Spo14399.1 vs. TAIR (Arabidopsis)
Match: AT3G47470.1 (light-harvesting chlorophyll-protein complex I subunit A4)

HSP 1 Score: 223.0 bits (567), Expect = 2.900e-58
Identity = 110/235 (46.81%), Postives = 142/235 (60.43%), Query Frame = 1

		  
Query: 65  TRASFLGGKKLRDSSKYRTPVSSNSFSVSAAAAEPERPIWFPGSTPPSWLDGSLPADFGF 124
           ++  FL G   R +         +S   S+   E ++  W PG   P +L GSL  D GF
Sbjct: 18  SKPRFLTGSSGRLNRDLSFTSIGSSAKTSSFKVEAKKGEWLPGLASPDYLTGSLAGDNGF 77

Query: 125 DPLGFGSDPETLRWMVQSEIVHCRWAMLGAAGIFIPEFLTKLGILNTPSWYTAGELDYFT 184
           DPLG   DPE L+W VQ+E+V+ RWAMLG AG+ +PE  TK+GI+N P WY AG+  YF 
Sbjct: 78  DPLGLAEDPENLKWFVQAELVNGRWAMLGVAGMLLPEVFTKIGIINVPEWYDAGKEQYFA 137

Query: 185 DTTTLFVVELVLIGWAEGRRWADILKPGCVNTDPIFPNNKLTGTDVGYPGGLWFDPLGWG 244
            ++TLFV+E +L  + E RRW DI  PG VN DPIF    L   +VGYPGG+ F+PL + 
Sbjct: 138 SSSTLFVIEFILFHYVEIRRWQDIKNPGSVNQDPIFKQYSLPKGEVGYPGGI-FNPLNFA 197

Query: 245 SGSPQKVKELRTKEIKNGRLAMLAVMGAWFQHIYTGTGPIDNLFAHLADPGHATI 300
                  +E + KE+ NGRLAMLA +G   QH  TG GP +NL  HL+DP H TI
Sbjct: 198 -----PTQEAKEKELANGRLAMLAFLGFVVQHNVTGKGPFENLLQHLSDPWHNTI 246

[Close]

BLAST of Spo14399.1 vs. TAIR (Arabidopsis)
Match: AT5G28450.1 (Chlorophyll A-B binding family protein)

HSP 1 Score: 203.8 bits (517), Expect = 1.800e-52
Identity = 91/104 (87.50%), Postives = 98/104 (94.23%), Query Frame = 1

		  
Query: 204 RWADILKPGCVNTDPIFPNNKLTGTDVGYPGGLWFDPLGWGSGSPQKVKELRTKEIKNGR 263
           R  DI+KPG VNTDP+FPNNKLTGTD+GYPGGLWFDPLGWGSGSP K+KELRTKEIKNGR
Sbjct: 71  RAPDIIKPGSVNTDPVFPNNKLTGTDIGYPGGLWFDPLGWGSGSPTKIKELRTKEIKNGR 130

Query: 264 LAMLAVMGAWFQHIYTGTGPIDNLFAHLADPGHATIFSVSFYPQ 308
           LAMLAVMGAWFQHIYTGTGPIDNLFAHLADPGHATIF+ +F P+
Sbjct: 131 LAMLAVMGAWFQHIYTGTGPIDNLFAHLADPGHATIFA-AFTPK 173

[Close]

BLAST of Spo14399.1 vs. TAIR (Arabidopsis)
Match: AT1G45474.1 (photosystem I light harvesting complex gene 5)

HSP 1 Score: 201.8 bits (512), Expect = 6.800e-52
Identity = 100/209 (47.85%), Postives = 129/209 (61.72%), Query Frame = 1

		  
Query: 100 ERPIWFPGSTPPSWLDGSLPADFGFDPLGFGSDPETLRWMVQSEIVHCRWAMLGAAGIFI 159
           ER  W PG  PP +LDG+L  D+GFDPLG G DPE+L+W VQ+E+VH R+AMLG AGI  
Sbjct: 45  ERATWLPGLNPPPYLDGNLAGDYGFDPLGLGEDPESLKWYVQAELVHSRFAMLGVAGILF 104

Query: 160 PEFLTKLGILNTPSWYTAGELDY-FTDTTTLFVVELVLIGWAEGRRWADILKPGCVNTDP 219
            + L   GI N P WY AG + + F  T TL VV+ +L+G+AE +R+ D + PG    + 
Sbjct: 105 TDLLRTTGIRNLPVWYEAGAVKFDFASTKTLIVVQFLLMGFAETKRYMDFVSPGSQAKEG 164

Query: 220 IF---PNNKLTGTDVGYPGGLWFDPLGWGSGSPQKVKELRTKEIKNGRLAMLAVMGAWFQ 279
            F       L G + GYPGG   +PLG      Q   + + KEIKNGRLAM+A++G + Q
Sbjct: 165 SFFFGLEAALEGLEPGYPGGPLLNPLGLAK-DVQNAHDWKLKEIKNGRLAMMAMLGFFVQ 224

Query: 280 HIYTGTGPIDNLFAHLADPGHATIFSVSF 305
              T TGPIDNL  HL++P H TI    F
Sbjct: 225 ASVTHTGPIDNLVEHLSNPWHKTIIQTLF 252

The following BLAST results are available for this feature:

BLAST of Spo14399.1 vs. NCBI nr
BLAST of Spo14399.1 vs. UniProtKB/TrEMBL
BLAST of Spo14399.1 vs. ExPASy Swiss-Prot
BLAST of Spo14399.1 vs. TAIR (Arabidopsis)

BLAST of Spo14399.1 vs. NCBI nr
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. NCBI nr)
Total hits: 5

Position :

Zoom :

x 1


Match Name	E-value	Identity	Description
gi\|902233476\|gb\|KNA23071.1\|	5.3e-155	98.5	hypothetical protein SOVF_0281...	[more]
gi\|731317473\|ref\|XP_010669087.1\|	1.6e-143	89.3	PREDICTED: chlorophyll a-b bin...	[more]
gi\|763748100\|gb\|KJB15539.1\|	1.8e-134	83.1	hypothetical protein B456_002G...	[more]
gi\|763748101\|gb\|KJB15540.1\|	4.8e-132	82.6	hypothetical protein B456_002G...	[more]
gi\|698480194\|ref\|XP_009787153.1\|	2.4e-131	81.9	PREDICTED: chlorophyll a-b bin...	[more]

BLAST of Spo14399.1 vs. UniProtKB/TrEMBL
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. UniprotKB/TrEMBL)
Total hits: 5

Position :

Zoom :

x 1


Match Name	E-value	Identity	Description
A0A0K9RU56_SPIOL	3.7e-155	98.5	Chlorophyll a-b binding protei...	[more]
A0A0J8CWG9_BETVU	1.1e-143	89.3	Chlorophyll a-b binding protei...	[more]
A0A0D2Q8H6_GOSRA	1.2e-134	83.1	Chlorophyll a-b binding protei...	[more]
A0A0D2R8N0_GOSRA	3.3e-132	82.6	Chlorophyll a-b binding protei...	[more]
D7TAY3_VITVI	2.8e-131	82.4	Chlorophyll a-b binding protei...	[more]

BLAST of Spo14399.1 vs. ExPASy Swiss-Prot
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. ExPASy SwissProt)
Total hits: 5

Position :

Zoom :

x 1


Match Name	E-value	Identity	Description
CB12_PETHY	4.3e-133	81.6	Chlorophyll a-b binding protei...	[more]
CB12_SOLLC	5.0e-129	79.0	Chlorophyll a-b binding protei...	[more]
LHCA2_ARATH	1.7e-121	77.2	Photosystem I chlorophyll a/b-...	[more]
LHCA6_ARATH	2.8e-79	53.3	Photosystem I chlorophyll a/b-...	[more]
CB24_PEA	2.1e-58	47.0	Chlorophyll a-b binding protei...	[more]

BLAST of Spo14399.1 vs. TAIR (Arabidopsis)
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. TAIR)
Total hits: 5

Position :

Zoom :

x 1


Match Name	E-value	Identity	Description
AT3G61470.1	9.6e-123	77.2	photosystem I light harvesting...	[more]
AT1G19150.1	1.6e-80	53.3	photosystem I light harvesting...	[more]
AT3G47470.1	2.9e-58	46.8	light-harvesting chlorophyll-p...	[more]
AT5G28450.1	1.8e-52	87.5	Chlorophyll A-B binding family...	[more]
AT1G45474.1	6.8e-52	47.8	photosystem I light harvesting...	[more]

InterPro

Analysis Name: InterPro Annotations of S. oleracea
Date Performed: 2018-06-29

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001344	Chlorophyll A-B binding protein, plant	PANTHER	PTHR21649	CHLOROPHYLL A/B BINDING PROTEIN	coord: 36..314 score: 5.1E
IPR022796	Chlorophyll A-B binding protein	PFAM	PF00504	Chloroa_b-bind	coord: 110..276 score: 1.4
IPR023329	Chlorophyll a/b binding protein domain	GENE3D	1.10.3460.10		coord: 102..301 score: 2.2
IPR023329	Chlorophyll a/b binding protein domain	unknown	SSF103511	Chlorophyll a-b binding protein	coord: 98..303 score: 8.11
None	No IPR available	PANTHER	PTHR21649:SF13	LHCA2 PROTEIN	coord: 36..314 score: 5.1E

GO Annotation

GO Assignments

This mRNA is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0009765	photosynthesis, light harvesting
biological_process	GO:0018298	protein-chromophore linkage
cellular_component	GO:0016020	membrane
cellular_component	GO:0009535	chloroplast thylakoid membrane
cellular_component	GO:0016021	integral component of membrane
cellular_component	GO:0009522	photosystem I
cellular_component	GO:0009523	photosystem II
molecular_function	GO:0016168	chlorophyll binding
molecular_function	GO:0046872	metal ion binding