Spo25606.1 (mRNA) | SpinachBase

Overview


Name	Spo25606.1
Type	mRNA
Organism	Spinacia oleracea (Spinach)
Description	Pentatricopeptide repeat-containing protein, putative
Location	chr1 : 37735906 .. 37737645 (+)
Sequence length	1374

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

AATGACTTCAATATTGCTTGGAGGGGAATCTTTTTCGGCGTTGCTCCTTTGACGTGCTAAACCAAAAGGCCGTCAAAACTAAACCAAAAGGCAAATGCAGGGGACATGAGCTTTGTACGTAGGGTTTTAGCTTCAACTAGGAAGGGTTTATGCTTAACCCCTCAAATTCCAATCAATCTCCCAAATTCACAACTGCCCTTTTGCAATTATCACTCAATTCCCAGCAATTTGTTGCAAAAATTGATAAATGAGCCAAAATCACGCATCAAAATCACTCTTGATTCGGAAGAAAATTCGACCCTCAAGAACATTGGTTTTTCCTGGGATTCCCTTCTCTGTGCTCTTAATTCTTCTTCTACATCCAAGGCAAACCTGGTAAATTTCTCATAAACTTATCTAGAAGTTTGAATTAAATTGGTTGCTTGAAAATTTCAATACCATTTGCAATAAAAGTCGTTTGAATTTTATTTGATTTTTTGGGGTTCTTTTTCCTAATTATATGAGTGGGAATTCAACATGTAAATTTGATTTTGATTTTGATTAATTAATTTGAAATCACTAGTTTTGGTCTTCTTATTCCCCCCTCAAGATTTTTGCTGTGGACTTTAATTTATGTTGTGTATGGATCACCAGTTAGCCACTCTAACTTTTTCAGCAAAAATCATAGCCTTTTTAGGAAGTTATGTCATGTAGATTTCTAGACTTCTGGTGCATTTAGCTTATGTTTATGGCTAATTACAGGCTTTGGAATGGAGATTAGAGAAACTGTTGAAGCACAATGAGAGAAACCAGGAGTTGTATACTGAACTAATTTCTCTTTGTGGAGAAACTCGCAATCTCGAGTTAGCTATGAGGATATTTATGGCAATGGAATCTGTTGGGTTAAAACCGACATCTGACGTCTTTAATTCGTTGATATCGACTTCTTTGTGTGTGGGAAATGAAATGACTGCACTCAGCTTGTTTGAGGTAATGGAGAGGTCAGATGACTGTAAACCAAATTCTAAAACTTATAATGCTTTCGTTTTAGTGTATGCTAAGTGGGGTAAGGTTAAGGTTATGCAAGCATGGGCCTCAGCTAAGAGAGATGCTGGTTTTCCTGCTGATTTGCAGTCATATGAATCTCTAATTTCAGGCTGTGTTAAAGCAAGAATGTATGATAATGCCGAAAGATTTTATGAAGAAATGGTATCATCAGGTTTTATACCTAACACACACATTTTGGACAGAATGGTTGATGGTTTTTGTGAACAGAAGGATCTTAGTAGAGCTAAAGAGTTTTTGCTCAACATGATTGATAATGGGTGGGAAATTAGTGCACATATAGCAGACAGGCTTTCAGGATTGTATTCAGGACTAGGGATGATGGAGGGAATTGAGGAGCTTCTCCAAACCCTAATAGCAACGAATGAAAGTCAAGAAGTTCTGTTGCGAGTTCATTGTGGAATCATTGGTATGCATGCAAAGGCGGATAGATTAGATGACATGGAATATGCTGTTGGGAGGATGTTGAAACAAGGGATATCATTCAAATCAGCTAATGATGTCAAGGTCATTATCCGATCTTACTTCAGGCGGGAAGCATATGATAGGCTAGAGTTGTTTTTGGAGCATATAAAAGGCTCTTACCAGTTCACAAAATCAACTTATGATGTATTGGTCACTGGTTATAATGAAGCTGGGTTATCCGAGAAATTGGATGTTTTGCTGAAGGAGCTGGGTTTGTGTGAAACTTCATGA

mRNA sequence

AATGACTTCAATATTGCTTGGAGGGGAATCTTTTTCGGCGTTGCTCCTTTGACGTGCTAAACCAAAAGGCCGTCAAAACTAAACCAAAAGGCAAATGCAGGGGACATGAGCTTTGTACGTAGGGTTTTAGCTTCAACTAGGAAGGGTTTATGCTTAACCCCTCAAATTCCAATCAATCTCCCAAATTCACAACTGCCCTTTTGCAATTATCACTCAATTCCCAGCAATTTGTTGCAAAAATTGATAAATGAGCCAAAATCACGCATCAAAATCACTCTTGATTCGGAAGAAAATTCGACCCTCAAGAACATTGGTTTTTCCTGGGATTCCCTTCTCTGTGCTCTTAATTCTTCTTCTACATCCAAGGCAAACCTGGCTTTGGAATGGAGATTAGAGAAACTGTTGAAGCACAATGAGAGAAACCAGGAGTTGTATACTGAACTAATTTCTCTTTGTGGAGAAACTCGCAATCTCGAGTTAGCTATGAGGATATTTATGGCAATGGAATCTGTTGGGTTAAAACCGACATCTGACGTCTTTAATTCGTTGATATCGACTTCTTTGTGTGTGGGAAATGAAATGACTGCACTCAGCTTGTTTGAGGTAATGGAGAGGTCAGATGACTGTAAACCAAATTCTAAAACTTATAATGCTTTCGTTTTAGTGTATGCTAAGTGGGGTAAGGTTAAGGTTATGCAAGCATGGGCCTCAGCTAAGAGAGATGCTGGTTTTCCTGCTGATTTGCAGTCATATGAATCTCTAATTTCAGGCTGTGTTAAAGCAAGAATGTATGATAATGCCGAAAGATTTTATGAAGAAATGGTATCATCAGGTTTTATACCTAACACACACATTTTGGACAGAATGGTTGATGGTTTTTGTGAACAGAAGGATCTTAGTAGAGCTAAAGAGTTTTTGCTCAACATGATTGATAATGGGTGGGAAATTAGTGCACATATAGCAGACAGGCTTTCAGGATTGTATTCAGGACTAGGGATGATGGAGGGAATTGAGGAGCTTCTCCAAACCCTAATAGCAACGAATGAAAGTCAAGAAGTTCTGTTGCGAGTTCATTGTGGAATCATTGGTATGCATGCAAAGGCGGATAGATTAGATGACATGGAATATGCTGTTGGGAGGATGTTGAAACAAGGGATATCATTCAAATCAGCTAATGATGTCAAGGTCATTATCCGATCTTACTTCAGGCGGGAAGCATATGATAGGCTAGAGTTGTTTTTGGAGCATATAAAAGGCTCTTACCAGTTCACAAAATCAACTTATGATGTATTGGTCACTGGTTATAATGAAGCTGGGTTATCCGAGAAATTGGATGTTTTGCTGAAGGAGCTGGGTTTGTGTGAAACTTCATGA

Coding sequence (CDS)

ATGAGCTTTGTACGTAGGGTTTTAGCTTCAACTAGGAAGGGTTTATGCTTAACCCCTCAAATTCCAATCAATCTCCCAAATTCACAACTGCCCTTTTGCAATTATCACTCAATTCCCAGCAATTTGTTGCAAAAATTGATAAATGAGCCAAAATCACGCATCAAAATCACTCTTGATTCGGAAGAAAATTCGACCCTCAAGAACATTGGTTTTTCCTGGGATTCCCTTCTCTGTGCTCTTAATTCTTCTTCTACATCCAAGGCAAACCTGGCTTTGGAATGGAGATTAGAGAAACTGTTGAAGCACAATGAGAGAAACCAGGAGTTGTATACTGAACTAATTTCTCTTTGTGGAGAAACTCGCAATCTCGAGTTAGCTATGAGGATATTTATGGCAATGGAATCTGTTGGGTTAAAACCGACATCTGACGTCTTTAATTCGTTGATATCGACTTCTTTGTGTGTGGGAAATGAAATGACTGCACTCAGCTTGTTTGAGGTAATGGAGAGGTCAGATGACTGTAAACCAAATTCTAAAACTTATAATGCTTTCGTTTTAGTGTATGCTAAGTGGGGTAAGGTTAAGGTTATGCAAGCATGGGCCTCAGCTAAGAGAGATGCTGGTTTTCCTGCTGATTTGCAGTCATATGAATCTCTAATTTCAGGCTGTGTTAAAGCAAGAATGTATGATAATGCCGAAAGATTTTATGAAGAAATGGTATCATCAGGTTTTATACCTAACACACACATTTTGGACAGAATGGTTGATGGTTTTTGTGAACAGAAGGATCTTAGTAGAGCTAAAGAGTTTTTGCTCAACATGATTGATAATGGGTGGGAAATTAGTGCACATATAGCAGACAGGCTTTCAGGATTGTATTCAGGACTAGGGATGATGGAGGGAATTGAGGAGCTTCTCCAAACCCTAATAGCAACGAATGAAAGTCAAGAAGTTCTGTTGCGAGTTCATTGTGGAATCATTGGTATGCATGCAAAGGCGGATAGATTAGATGACATGGAATATGCTGTTGGGAGGATGTTGAAACAAGGGATATCATTCAAATCAGCTAATGATGTCAAGGTCATTATCCGATCTTACTTCAGGCGGGAAGCATATGATAGGCTAGAGTTGTTTTTGGAGCATATAAAAGGCTCTTACCAGTTCACAAAATCAACTTATGATGTATTGGTCACTGGTTATAATGAAGCTGGGTTATCCGAGAAATTGGATGTTTTGCTGAAGGAGCTGGGTTTGTGTGAAACTTCATGA

Protein sequence

MSFVRRVLASTRKGLCLTPQIPINLPNSQLPFCNYHSIPSNLLQKLINEPKSRIKITLDSEENSTLKNIGFSWDSLLCALNSSSTSKANLALEWRLEKLLKHNERNQELYTELISLCGETRNLELAMRIFMAMESVGLKPTSDVFNSLISTSLCVGNEMTALSLFEVMERSDDCKPNSKTYNAFVLVYAKWGKVKVMQAWASAKRDAGFPADLQSYESLISGCVKARMYDNAERFYEEMVSSGFIPNTHILDRMVDGFCEQKDLSRAKEFLLNMIDNGWEISAHIADRLSGLYSGLGMMEGIEELLQTLIATNESQEVLLRVHCGIIGMHAKADRLDDMEYAVGRMLKQGISFKSANDVKVIIRSYFRREAYDRLELFLEHIKGSYQFTKSTYDVLVTGYNEAGLSEKLDVLLKELGLCETS

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
Spo25606	Spo25606	gene

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
Spo25606.1	Spo25606.1-protein	polypeptide

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Spo25606.1.exon.1	Spo25606.1.exon.1	exon
Spo25606.1.exon.2	Spo25606.1.exon.2	exon

The following five_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Spo25606.1.utr5p.1	Spo25606.1.utr5p.1	five_prime_UTR

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Spo25606.1.CDS.1	Spo25606.1.CDS.1	CDS
Spo25606.1.CDS.2	Spo25606.1.CDS.2	CDS

Homology

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BLAST of Spo25606.1 vs. NCBI nr
Match: gi|902230174|gb|KNA21749.1| (hypothetical protein SOVF_040460 [Spinacia oleracea])

HSP 1 Score: 838.2 bits (2164), Expect = 6.400e-240
Identity = 422/422 (100.00%), Postives = 422/422 (100.00%), Query Frame = 1


		  
Query: 1   MSFVRRVLASTRKGLCLTPQIPINLPNSQLPFCNYHSIPSNLLQKLINEPKSRIKITLDS 60
           MSFVRRVLASTRKGLCLTPQIPINLPNSQLPFCNYHSIPSNLLQKLINEPKSRIKITLDS
Sbjct: 1   MSFVRRVLASTRKGLCLTPQIPINLPNSQLPFCNYHSIPSNLLQKLINEPKSRIKITLDS 60

Query: 61  EENSTLKNIGFSWDSLLCALNSSSTSKANLALEWRLEKLLKHNERNQELYTELISLCGET 120
           EENSTLKNIGFSWDSLLCALNSSSTSKANLALEWRLEKLLKHNERNQELYTELISLCGET
Sbjct: 61  EENSTLKNIGFSWDSLLCALNSSSTSKANLALEWRLEKLLKHNERNQELYTELISLCGET 120

Query: 121 RNLELAMRIFMAMESVGLKPTSDVFNSLISTSLCVGNEMTALSLFEVMERSDDCKPNSKT 180
           RNLELAMRIFMAMESVGLKPTSDVFNSLISTSLCVGNEMTALSLFEVMERSDDCKPNSKT
Sbjct: 121 RNLELAMRIFMAMESVGLKPTSDVFNSLISTSLCVGNEMTALSLFEVMERSDDCKPNSKT 180

Query: 181 YNAFVLVYAKWGKVKVMQAWASAKRDAGFPADLQSYESLISGCVKARMYDNAERFYEEMV 240
           YNAFVLVYAKWGKVKVMQAWASAKRDAGFPADLQSYESLISGCVKARMYDNAERFYEEMV
Sbjct: 181 YNAFVLVYAKWGKVKVMQAWASAKRDAGFPADLQSYESLISGCVKARMYDNAERFYEEMV 240

Query: 241 SSGFIPNTHILDRMVDGFCEQKDLSRAKEFLLNMIDNGWEISAHIADRLSGLYSGLGMME 300
           SSGFIPNTHILDRMVDGFCEQKDLSRAKEFLLNMIDNGWEISAHIADRLSGLYSGLGMME
Sbjct: 241 SSGFIPNTHILDRMVDGFCEQKDLSRAKEFLLNMIDNGWEISAHIADRLSGLYSGLGMME 300

Query: 301 GIEELLQTLIATNESQEVLLRVHCGIIGMHAKADRLDDMEYAVGRMLKQGISFKSANDVK 360
           GIEELLQTLIATNESQEVLLRVHCGIIGMHAKADRLDDMEYAVGRMLKQGISFKSANDVK
Sbjct: 301 GIEELLQTLIATNESQEVLLRVHCGIIGMHAKADRLDDMEYAVGRMLKQGISFKSANDVK 360

Query: 361 VIIRSYFRREAYDRLELFLEHIKGSYQFTKSTYDVLVTGYNEAGLSEKLDVLLKELGLCE 420
           VIIRSYFRREAYDRLELFLEHIKGSYQFTKSTYDVLVTGYNEAGLSEKLDVLLKELGLCE
Sbjct: 361 VIIRSYFRREAYDRLELFLEHIKGSYQFTKSTYDVLVTGYNEAGLSEKLDVLLKELGLCE 420

Query: 421 TS 423
           TS
Sbjct: 421 TS 422

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BLAST of Spo25606.1 vs. NCBI nr
Match: gi|731317130|ref|XP_010667844.1| (PREDICTED: pentatricopeptide repeat-containing protein At4g19890-like [Beta vulgaris subsp. vulgaris])

HSP 1 Score: 679.1 bits (1751), Expect = 5.000e-192
Identity = 342/422 (81.04%), Postives = 376/422 (89.10%), Query Frame = 1


		  
Query: 1   MSFVRRVLASTRKGLCLTPQIPINLPNSQLPFCNYHSIPSNLLQKLINEPKSRIKITLDS 60
           MSFVRRVLAST KGLC TPQI I LPN QLP CNYHSIP+NLL KLI EP SRIKI LDS
Sbjct: 2   MSFVRRVLASTTKGLCSTPQISIKLPNLQLPICNYHSIPNNLLHKLIKEPNSRIKIILDS 61

Query: 61  EENSTLKNIGFSWDSLLCALNSSSTSKANLALEWRLEKLLKHNERNQELYTELISLCGET 120
           EENSTL + GFSW++LL ALNSSSTSKANLALEWRLE LLKHNERNQELYTEL+SLCGET
Sbjct: 62  EENSTLNSFGFSWNALLAALNSSSTSKANLALEWRLENLLKHNERNQELYTELMSLCGET 121

Query: 121 RNLELAMRIFMAMESVGLKPTSDVFNSLISTSLCVGNEMTALSLFEVMERSDDCKPNSKT 180
           RNLELAMRIFMAMESVGLKPTSD FNSLIS SL V NE+TALSLFE+M RS+D KPN+KT
Sbjct: 122 RNLELAMRIFMAMESVGLKPTSDNFNSLISVSLSVRNELTALSLFEIMGRSEDYKPNAKT 181

Query: 181 YNAFVLVYAKWGKVKVMQAWASAKRDAGFPADLQSYESLISGCVKARMYDNAERFYEEMV 240
           YN F+ +YAK G VKVMQ+WASAKR AGFPADLQSYESLISGCVKA+  D AE++YEEMV
Sbjct: 182 YNPFISMYAKLGNVKVMQSWASAKRAAGFPADLQSYESLISGCVKAKSLDIAEKYYEEMV 241

Query: 241 SSGFIPNTHILDRMVDGFCEQKDLSRAKEFLLNMIDNGWEISAHIADRLSGLYSGLGMME 300
           SSGFIPN HIL++MVDGFCEQKDL R ++FLL MIDNGW IS+HIADRLSGLYS LG +E
Sbjct: 242 SSGFIPNVHILEKMVDGFCEQKDLGRTRDFLLYMIDNGWAISSHIADRLSGLYSVLGKIE 301

Query: 301 GIEELLQTLIATNESQEVLLRVHCGIIGMHAKADRLDDMEYAVGRMLKQGISFKSANDVK 360
           GIE+LLQ L A+N S EVL RV+C II MHA+ADRLDDMEYAVGRMLKQGISFKSA+DVK
Sbjct: 302 GIEDLLQILTASNGSPEVLSRVYCAIISMHARADRLDDMEYAVGRMLKQGISFKSADDVK 361

Query: 361 VIIRSYFRREAYDRLELFLEHIKGSYQFTKSTYDVLVTGYNEAGLSEKLDVLLKELGLCE 420
           ++IRSYF+R AYDRLELFLEHIKGSYQFTKST D+LVTGY+EAGLS+KLD+LLKEL LC 
Sbjct: 362 IVIRSYFKRAAYDRLELFLEHIKGSYQFTKSTCDLLVTGYHEAGLSDKLDMLLKELNLCG 421

Query: 421 TS 423
           +S
Sbjct: 422 SS 423

[Close]

BLAST of Spo25606.1 vs. NCBI nr
Match: gi|359476047|ref|XP_002281582.2| (PREDICTED: pentatricopeptide repeat-containing protein At5g02860 [Vitis vinifera])

HSP 1 Score: 447.2 bits (1149), Expect = 3.200e-122
Identity = 228/418 (54.55%), Postives = 307/418 (73.44%), Query Frame = 1


		  
Query: 1   MSFVRRVLASTRKGLCLTPQIPINLPNSQLPFCNYHSIPSNLLQKLINEPKSRIKITLDS 60
           M FV RVL+  ++GL   P++ +    SQ  FC+   + + LL KL+ E  SRIK  LDS
Sbjct: 1   MGFVLRVLSVAKRGL--RPRLVLIPCRSQRLFCDKPLVSNPLLIKLLQESISRIKTVLDS 60

Query: 61  EENSTLKNIGFSWDSLLCALNSSSTSKANLALEWRLEKLLKHNERNQELYTELISLCGET 120
           E+N T K+  FSWD LL  L SSS +KA+L LEWRLEK+++ NER+   Y ELI LC + 
Sbjct: 61  EDNFTFKSSDFSWDILLTTLKSSSPAKAHLVLEWRLEKMVRDNERDLVPYLELIFLCSKV 120

Query: 121 RNLELAMRIFMAMESVGLKPTSDVFNSLISTSLCVGNEMTALSLFEVMERSDDCKPNSKT 180
           +N+  AMR+F +ME+ G+K TS VFN+LI T L  GN MTALSLFE+M+ S++CKPNS+T
Sbjct: 121 QNVPFAMRVFNSMEAHGIKLTSSVFNALIYTCLSSGNVMTALSLFEIMQSSENCKPNSET 180

Query: 181 YNAFVLVYAKWGKVKVMQAWASAKRDAGFPADLQSYESLISGCVKARMYDNAERFYEEMV 240
           YN F+ VY+  G  K MQAW  A++ AGF ADL++YESLISGCV++R +D A+RFYEEM+
Sbjct: 181 YNTFISVYSNLGNDKAMQAWYLAQKGAGFSADLRTYESLISGCVRSRNFDCADRFYEEMM 240

Query: 241 SSGFIPNTHILDRMVDGFCEQKDLSRAKEFLLNMIDNGWEISAHIADRLSGLYSGLGMME 300
            SG +PN  IL+ ++ G CEQ+ +S+ ++ L  M+D  WEI+  +A++L GLY   G +E
Sbjct: 241 LSGIMPNGQILENILRGLCEQRSISKVEQLLKFMMDGEWEINVSMAEKLMGLYFEHGTVE 300

Query: 301 GIEELLQTLIATNESQEVLLRVHCGIIGMHAKADRLDDMEYAVGRMLKQGISFKSANDVK 360
            +EELL  L+ +N+S  VL +VHCGII MHA  DRLDDMEY+VGRMLKQG+SF+  +D++
Sbjct: 301 KMEELLLNLMNSNQSFAVLQQVHCGIIRMHAMLDRLDDMEYSVGRMLKQGMSFRCPDDIE 360

Query: 361 VIIRSYFRREAYDRLELFLEHIKGSYQFTKSTYDVLVTGYNEAGLSEKLDVLLKELGL 419
            ++ +YFRREAY+RL+LFL HIKGSY+ TKSTYD+LV GY  AGLSEKLD+++  + L
Sbjct: 361 KVVCAYFRREAYERLDLFLGHIKGSYKLTKSTYDLLVAGYRRAGLSEKLDLVMDGMKL 416

[Close]

BLAST of Spo25606.1 vs. NCBI nr
Match: gi|147812171|emb|CAN61515.1| (hypothetical protein VITISV_033964 [Vitis vinifera])

HSP 1 Score: 438.3 bits (1126), Expect = 1.500e-119
Identity = 222/405 (54.81%), Postives = 298/405 (73.58%), Query Frame = 1


		  
Query: 15   LCLTPQIPINLPN-SQLPFCNYHSIPSNLLQKLINEPKSRIKITLDSEENSTLKNIGFSW 74
            L L+ Q+ I +P  SQ  FC+   + + LL KL+ E  SRIK  LDSE+N T K+  FSW
Sbjct: 923  LSLSAQLNIGIPQRSQRLFCDKPLVSNPLLIKLLQESISRIKTVLDSEDNFTFKSSDFSW 982

Query: 75   DSLLCALNSSSTSKANLALEWRLEKLLKHNERNQELYTELISLCGETRNLELAMRIFMAM 134
            D LL  L SSS +KA+L LEWRLEK+++ NER+   Y ELI LC + +N+  AMR+F +M
Sbjct: 983  DILLTTLKSSSPAKAHLVLEWRLEKMVRDNERDLVPYLELIFLCSKVQNVPFAMRVFNSM 1042

Query: 135  ESVGLKPTSDVFNSLISTSLCVGNEMTALSLFEVMERSDDCKPNSKTYNAFVLVYAKWGK 194
            E+ G+K TS VFN+LI T L  GN MTALSLFE+M+ S++CKPNS+TYN F+ VY+  G 
Sbjct: 1043 EAHGIKLTSSVFNALICTCLSSGNVMTALSLFEIMQSSENCKPNSETYNTFISVYSNLGN 1102

Query: 195  VKVMQAWASAKRDAGFPADLQSYESLISGCVKARMYDNAERFYEEMVSSGFIPNTHILDR 254
             K MQAW  A + AGF ADL++YESLISGC ++R +D A+RFYEEM+ SG +P+  IL+ 
Sbjct: 1103 DKAMQAWYLAXKGAGFSADLRTYESLISGCXRSRNFDCADRFYEEMMLSGIMPBGQILEN 1162

Query: 255  MVDGFCEQKDLSRAKEFLLNMIDNGWEISAHIADRLSGLYSGLGMMEGIEELLQTLIATN 314
            ++ G CEQ+ +S+ ++ L  M+D  WEI+  +A++L GLY   G +E +EELL  L+ +N
Sbjct: 1163 ILRGLCEQRSISKVEQLLKFMMDGEWEINVSMAEKLMGLYFEHGTVEKMEELLLNLMNSN 1222

Query: 315  ESQEVLLRVHCGIIGMHAKADRLDDMEYAVGRMLKQGISFKSANDVKVIIRSYFRREAYD 374
            +S  VL +VHCGII MHA  DRLDDMEY+VGRMLKQG+SF+  +D++ ++ +YFRREAY+
Sbjct: 1223 QSFAVLQQVHCGIIRMHAMLDRLDDMEYSVGRMLKQGMSFRCPDDIEKVVCAYFRREAYE 1282

Query: 375  RLELFLEHIKGSYQFTKSTYDVLVTGYNEAGLSEKLDVLLKELGL 419
            RL+LFL HIKGSY+ TKSTYD+LV GY  AGLSEKLD+++  + L
Sbjct: 1283 RLDLFLGHIKGSYKLTKSTYDLLVAGYRRAGLSEKLDLVMDGMKL 1327

[Close]

BLAST of Spo25606.1 vs. NCBI nr
Match: gi|719994228|ref|XP_010254117.1| (PREDICTED: pentatricopeptide repeat-containing protein At1g62930, chloroplastic-like [Nelumbo nucifera])

HSP 1 Score: 416.8 bits (1070), Expect = 4.600e-113
Identity = 220/417 (52.76%), Postives = 288/417 (69.06%), Query Frame = 1


		  
Query: 6   RVLASTRKGLCLTPQIPINLPNSQLPFCNYHSIPSNLLQKLINEPKSRIKITLDSEENST 65
           RVL+  ++GL    +  I     Q+  C   S    L  KL+ E  S IK  LD EE+  
Sbjct: 8   RVLSVAKRGL--RREFSIYPAKYQILVCRESSSSIPLAVKLLQETNSGIKSALDLEEDLA 67

Query: 66  LKNIGFSWDSLLCALNSSSTSKANLALEWRLEKLLKHNERNQELYTELISLCGETRNLEL 125
           L      W+ L+  L SSS  KA L LEW+LEK+LK NE++   Y+ELI LCG+T+N+  
Sbjct: 68  LGKDTVFWEFLVTTLRSSSPVKAQLVLEWKLEKMLKENEKDHGCYSELIFLCGKTQNVPF 127

Query: 126 AMRIFMAMESVGLKPTSDVFNSLISTSLCVGNEMTALSLFEVMERSDDCKPNSKTYNAFV 185
           A+R+F +ME++G++PTS VFNSLI T L  GN  TALSLFE+MERS+D KPNS TYNAF+
Sbjct: 128 ALRVFTSMEALGIRPTSAVFNSLIFTCLSSGNLTTALSLFEIMERSEDYKPNSATYNAFI 187

Query: 186 LVYAKWGKVKVMQAWASAKRDAGFPADLQSYESLISGCVKARMYDNAERFYEEMVSSGFI 245
            +Y++    K MQ W SA++ AGFP ++Q+YESLI G +K++ +  A+RFYEEMV SG  
Sbjct: 188 FMYSEAKDGKAMQTWYSARKAAGFPPNVQTYESLIVGSIKSKDFGTADRFYEEMVLSGVT 247

Query: 246 PNTHILDRMVDGFCEQKDLSRAKEFLLNMIDNGWEISAHIADRLSGLYSGLGMMEGIEEL 305
           PN  IL+ MV+G C+QK + +A EFL  M+D GWEIS  +A  L  LY  LG +E +EEL
Sbjct: 248 PNVSILENMVEGLCKQKKIDKANEFLKFMLDGGWEISIRMAKNLLELYFELGKVEEMEEL 307

Query: 306 LQTLIATNESQEVLLRVHCGIIGMHAKADRLDDMEYAVGRMLKQGISFKSANDVKVIIRS 365
           LQ L   N++  VL RVHCGII M+A +DRLDD+EYAVGRMLKQG+ F   +DV+ II S
Sbjct: 308 LQGLTKANQNSVVLSRVHCGIIRMYALSDRLDDLEYAVGRMLKQGLLFACPDDVEKIICS 367

Query: 366 YFRREAYDRLELFLEHIKGSYQFTKSTYDVLVTGYNEAGLSEKLDVLLKELGLCETS 423
           YFRR AY+RL+LFLE I+GSY  TKSTYD+LV GY  AGLSE+L+ +++++ L   S
Sbjct: 368 YFRRAAYERLDLFLERIRGSYLLTKSTYDLLVAGYRRAGLSERLNSVVRDMELAGIS 422

[Close]

BLAST of Spo25606.1 vs. UniProtKB/TrEMBL
Match: A0A0K9RS68_SPIOL (Uncharacterized protein OS=Spinacia oleracea GN=SOVF_040460 PE=4 SV=1)

HSP 1 Score: 838.2 bits (2164), Expect = 4.500e-240
Identity = 422/422 (100.00%), Postives = 422/422 (100.00%), Query Frame = 1


		  
Query: 1   MSFVRRVLASTRKGLCLTPQIPINLPNSQLPFCNYHSIPSNLLQKLINEPKSRIKITLDS 60
           MSFVRRVLASTRKGLCLTPQIPINLPNSQLPFCNYHSIPSNLLQKLINEPKSRIKITLDS
Sbjct: 1   MSFVRRVLASTRKGLCLTPQIPINLPNSQLPFCNYHSIPSNLLQKLINEPKSRIKITLDS 60

Query: 61  EENSTLKNIGFSWDSLLCALNSSSTSKANLALEWRLEKLLKHNERNQELYTELISLCGET 120
           EENSTLKNIGFSWDSLLCALNSSSTSKANLALEWRLEKLLKHNERNQELYTELISLCGET
Sbjct: 61  EENSTLKNIGFSWDSLLCALNSSSTSKANLALEWRLEKLLKHNERNQELYTELISLCGET 120

Query: 121 RNLELAMRIFMAMESVGLKPTSDVFNSLISTSLCVGNEMTALSLFEVMERSDDCKPNSKT 180
           RNLELAMRIFMAMESVGLKPTSDVFNSLISTSLCVGNEMTALSLFEVMERSDDCKPNSKT
Sbjct: 121 RNLELAMRIFMAMESVGLKPTSDVFNSLISTSLCVGNEMTALSLFEVMERSDDCKPNSKT 180

Query: 181 YNAFVLVYAKWGKVKVMQAWASAKRDAGFPADLQSYESLISGCVKARMYDNAERFYEEMV 240
           YNAFVLVYAKWGKVKVMQAWASAKRDAGFPADLQSYESLISGCVKARMYDNAERFYEEMV
Sbjct: 181 YNAFVLVYAKWGKVKVMQAWASAKRDAGFPADLQSYESLISGCVKARMYDNAERFYEEMV 240

Query: 241 SSGFIPNTHILDRMVDGFCEQKDLSRAKEFLLNMIDNGWEISAHIADRLSGLYSGLGMME 300
           SSGFIPNTHILDRMVDGFCEQKDLSRAKEFLLNMIDNGWEISAHIADRLSGLYSGLGMME
Sbjct: 241 SSGFIPNTHILDRMVDGFCEQKDLSRAKEFLLNMIDNGWEISAHIADRLSGLYSGLGMME 300

Query: 301 GIEELLQTLIATNESQEVLLRVHCGIIGMHAKADRLDDMEYAVGRMLKQGISFKSANDVK 360
           GIEELLQTLIATNESQEVLLRVHCGIIGMHAKADRLDDMEYAVGRMLKQGISFKSANDVK
Sbjct: 301 GIEELLQTLIATNESQEVLLRVHCGIIGMHAKADRLDDMEYAVGRMLKQGISFKSANDVK 360

Query: 361 VIIRSYFRREAYDRLELFLEHIKGSYQFTKSTYDVLVTGYNEAGLSEKLDVLLKELGLCE 420
           VIIRSYFRREAYDRLELFLEHIKGSYQFTKSTYDVLVTGYNEAGLSEKLDVLLKELGLCE
Sbjct: 361 VIIRSYFRREAYDRLELFLEHIKGSYQFTKSTYDVLVTGYNEAGLSEKLDVLLKELGLCE 420

Query: 421 TS 423
           TS
Sbjct: 421 TS 422

[Close]

BLAST of Spo25606.1 vs. UniProtKB/TrEMBL
Match: A0A0J8FQU2_BETVU (Uncharacterized protein OS=Beta vulgaris subsp. vulgaris GN=BVRB_2g031800 PE=4 SV=1)

HSP 1 Score: 679.1 bits (1751), Expect = 3.500e-192
Identity = 342/422 (81.04%), Postives = 376/422 (89.10%), Query Frame = 1


		  
Query: 1   MSFVRRVLASTRKGLCLTPQIPINLPNSQLPFCNYHSIPSNLLQKLINEPKSRIKITLDS 60
           MSFVRRVLAST KGLC TPQI I LPN QLP CNYHSIP+NLL KLI EP SRIKI LDS
Sbjct: 2   MSFVRRVLASTTKGLCSTPQISIKLPNLQLPICNYHSIPNNLLHKLIKEPNSRIKIILDS 61

Query: 61  EENSTLKNIGFSWDSLLCALNSSSTSKANLALEWRLEKLLKHNERNQELYTELISLCGET 120
           EENSTL + GFSW++LL ALNSSSTSKANLALEWRLE LLKHNERNQELYTEL+SLCGET
Sbjct: 62  EENSTLNSFGFSWNALLAALNSSSTSKANLALEWRLENLLKHNERNQELYTELMSLCGET 121

Query: 121 RNLELAMRIFMAMESVGLKPTSDVFNSLISTSLCVGNEMTALSLFEVMERSDDCKPNSKT 180
           RNLELAMRIFMAMESVGLKPTSD FNSLIS SL V NE+TALSLFE+M RS+D KPN+KT
Sbjct: 122 RNLELAMRIFMAMESVGLKPTSDNFNSLISVSLSVRNELTALSLFEIMGRSEDYKPNAKT 181

Query: 181 YNAFVLVYAKWGKVKVMQAWASAKRDAGFPADLQSYESLISGCVKARMYDNAERFYEEMV 240
           YN F+ +YAK G VKVMQ+WASAKR AGFPADLQSYESLISGCVKA+  D AE++YEEMV
Sbjct: 182 YNPFISMYAKLGNVKVMQSWASAKRAAGFPADLQSYESLISGCVKAKSLDIAEKYYEEMV 241

Query: 241 SSGFIPNTHILDRMVDGFCEQKDLSRAKEFLLNMIDNGWEISAHIADRLSGLYSGLGMME 300
           SSGFIPN HIL++MVDGFCEQKDL R ++FLL MIDNGW IS+HIADRLSGLYS LG +E
Sbjct: 242 SSGFIPNVHILEKMVDGFCEQKDLGRTRDFLLYMIDNGWAISSHIADRLSGLYSVLGKIE 301

Query: 301 GIEELLQTLIATNESQEVLLRVHCGIIGMHAKADRLDDMEYAVGRMLKQGISFKSANDVK 360
           GIE+LLQ L A+N S EVL RV+C II MHA+ADRLDDMEYAVGRMLKQGISFKSA+DVK
Sbjct: 302 GIEDLLQILTASNGSPEVLSRVYCAIISMHARADRLDDMEYAVGRMLKQGISFKSADDVK 361

Query: 361 VIIRSYFRREAYDRLELFLEHIKGSYQFTKSTYDVLVTGYNEAGLSEKLDVLLKELGLCE 420
           ++IRSYF+R AYDRLELFLEHIKGSYQFTKST D+LVTGY+EAGLS+KLD+LLKEL LC 
Sbjct: 362 IVIRSYFKRAAYDRLELFLEHIKGSYQFTKSTCDLLVTGYHEAGLSDKLDMLLKELNLCG 421

Query: 421 TS 423
           +S
Sbjct: 422 SS 423

[Close]

BLAST of Spo25606.1 vs. UniProtKB/TrEMBL
Match: D7SUE7_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_04s0008g03870 PE=4 SV=1)

HSP 1 Score: 447.2 bits (1149), Expect = 2.200e-122
Identity = 228/418 (54.55%), Postives = 307/418 (73.44%), Query Frame = 1


		  
Query: 1   MSFVRRVLASTRKGLCLTPQIPINLPNSQLPFCNYHSIPSNLLQKLINEPKSRIKITLDS 60
           M FV RVL+  ++GL   P++ +    SQ  FC+   + + LL KL+ E  SRIK  LDS
Sbjct: 1   MGFVLRVLSVAKRGL--RPRLVLIPCRSQRLFCDKPLVSNPLLIKLLQESISRIKTVLDS 60

Query: 61  EENSTLKNIGFSWDSLLCALNSSSTSKANLALEWRLEKLLKHNERNQELYTELISLCGET 120
           E+N T K+  FSWD LL  L SSS +KA+L LEWRLEK+++ NER+   Y ELI LC + 
Sbjct: 61  EDNFTFKSSDFSWDILLTTLKSSSPAKAHLVLEWRLEKMVRDNERDLVPYLELIFLCSKV 120

Query: 121 RNLELAMRIFMAMESVGLKPTSDVFNSLISTSLCVGNEMTALSLFEVMERSDDCKPNSKT 180
           +N+  AMR+F +ME+ G+K TS VFN+LI T L  GN MTALSLFE+M+ S++CKPNS+T
Sbjct: 121 QNVPFAMRVFNSMEAHGIKLTSSVFNALIYTCLSSGNVMTALSLFEIMQSSENCKPNSET 180

Query: 181 YNAFVLVYAKWGKVKVMQAWASAKRDAGFPADLQSYESLISGCVKARMYDNAERFYEEMV 240
           YN F+ VY+  G  K MQAW  A++ AGF ADL++YESLISGCV++R +D A+RFYEEM+
Sbjct: 181 YNTFISVYSNLGNDKAMQAWYLAQKGAGFSADLRTYESLISGCVRSRNFDCADRFYEEMM 240

Query: 241 SSGFIPNTHILDRMVDGFCEQKDLSRAKEFLLNMIDNGWEISAHIADRLSGLYSGLGMME 300
            SG +PN  IL+ ++ G CEQ+ +S+ ++ L  M+D  WEI+  +A++L GLY   G +E
Sbjct: 241 LSGIMPNGQILENILRGLCEQRSISKVEQLLKFMMDGEWEINVSMAEKLMGLYFEHGTVE 300

Query: 301 GIEELLQTLIATNESQEVLLRVHCGIIGMHAKADRLDDMEYAVGRMLKQGISFKSANDVK 360
            +EELL  L+ +N+S  VL +VHCGII MHA  DRLDDMEY+VGRMLKQG+SF+  +D++
Sbjct: 301 KMEELLLNLMNSNQSFAVLQQVHCGIIRMHAMLDRLDDMEYSVGRMLKQGMSFRCPDDIE 360

Query: 361 VIIRSYFRREAYDRLELFLEHIKGSYQFTKSTYDVLVTGYNEAGLSEKLDVLLKELGL 419
            ++ +YFRREAY+RL+LFL HIKGSY+ TKSTYD+LV GY  AGLSEKLD+++  + L
Sbjct: 361 KVVCAYFRREAYERLDLFLGHIKGSYKLTKSTYDLLVAGYRRAGLSEKLDLVMDGMKL 416

[Close]

BLAST of Spo25606.1 vs. UniProtKB/TrEMBL
Match: A5BLD0_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_033964 PE=4 SV=1)

HSP 1 Score: 438.3 bits (1126), Expect = 1.000e-119
Identity = 222/405 (54.81%), Postives = 298/405 (73.58%), Query Frame = 1


		  
Query: 15   LCLTPQIPINLPN-SQLPFCNYHSIPSNLLQKLINEPKSRIKITLDSEENSTLKNIGFSW 74
            L L+ Q+ I +P  SQ  FC+   + + LL KL+ E  SRIK  LDSE+N T K+  FSW
Sbjct: 923  LSLSAQLNIGIPQRSQRLFCDKPLVSNPLLIKLLQESISRIKTVLDSEDNFTFKSSDFSW 982

Query: 75   DSLLCALNSSSTSKANLALEWRLEKLLKHNERNQELYTELISLCGETRNLELAMRIFMAM 134
            D LL  L SSS +KA+L LEWRLEK+++ NER+   Y ELI LC + +N+  AMR+F +M
Sbjct: 983  DILLTTLKSSSPAKAHLVLEWRLEKMVRDNERDLVPYLELIFLCSKVQNVPFAMRVFNSM 1042

Query: 135  ESVGLKPTSDVFNSLISTSLCVGNEMTALSLFEVMERSDDCKPNSKTYNAFVLVYAKWGK 194
            E+ G+K TS VFN+LI T L  GN MTALSLFE+M+ S++CKPNS+TYN F+ VY+  G 
Sbjct: 1043 EAHGIKLTSSVFNALICTCLSSGNVMTALSLFEIMQSSENCKPNSETYNTFISVYSNLGN 1102

Query: 195  VKVMQAWASAKRDAGFPADLQSYESLISGCVKARMYDNAERFYEEMVSSGFIPNTHILDR 254
             K MQAW  A + AGF ADL++YESLISGC ++R +D A+RFYEEM+ SG +P+  IL+ 
Sbjct: 1103 DKAMQAWYLAXKGAGFSADLRTYESLISGCXRSRNFDCADRFYEEMMLSGIMPBGQILEN 1162

Query: 255  MVDGFCEQKDLSRAKEFLLNMIDNGWEISAHIADRLSGLYSGLGMMEGIEELLQTLIATN 314
            ++ G CEQ+ +S+ ++ L  M+D  WEI+  +A++L GLY   G +E +EELL  L+ +N
Sbjct: 1163 ILRGLCEQRSISKVEQLLKFMMDGEWEINVSMAEKLMGLYFEHGTVEKMEELLLNLMNSN 1222

Query: 315  ESQEVLLRVHCGIIGMHAKADRLDDMEYAVGRMLKQGISFKSANDVKVIIRSYFRREAYD 374
            +S  VL +VHCGII MHA  DRLDDMEY+VGRMLKQG+SF+  +D++ ++ +YFRREAY+
Sbjct: 1223 QSFAVLQQVHCGIIRMHAMLDRLDDMEYSVGRMLKQGMSFRCPDDIEKVVCAYFRREAYE 1282

Query: 375  RLELFLEHIKGSYQFTKSTYDVLVTGYNEAGLSEKLDVLLKELGL 419
            RL+LFL HIKGSY+ TKSTYD+LV GY  AGLSEKLD+++  + L
Sbjct: 1283 RLDLFLGHIKGSYKLTKSTYDLLVAGYRRAGLSEKLDLVMDGMKL 1327

[Close]

BLAST of Spo25606.1 vs. UniProtKB/TrEMBL
Match: A0A061FZA9_THECC (Tetratricopeptide repeat-like superfamily protein, putative OS=Theobroma cacao GN=TCM_014398 PE=4 SV=1)

HSP 1 Score: 407.5 bits (1046), Expect = 1.900e-110
Identity = 205/418 (49.04%), Postives = 299/418 (71.53%), Query Frame = 1


		  
Query: 1   MSFVRRVLASTRKGLCLTPQIPINLPNSQLPFCNYHSIPSNLLQKLINEPKSRIKITLDS 60
           M+ VR+ L S  K   L+ QI +    SQ  F N  S    LL+KL+  P S IK TLDS
Sbjct: 1   MALVRKGLVSVAKR-GLSSQIMLIPFKSQRSFWNEPSSADPLLKKLLQVPSSLIKTTLDS 60

Query: 61  EENSTLKNIGFSWDSLLCALNSSSTSKANLALEWRLEKLLKHNERNQELYTELISLCGET 120
            +   L+N  FSW++L+  L S S+ KA L LEW+LEK+LK +ER+ + Y  L+SLC +T
Sbjct: 61  YDRFALRNSEFSWNALVAGLPSLSSEKAQLVLEWKLEKMLKDSERDYDQYLNLMSLCAKT 120

Query: 121 RNLELAMRIFMAMESVGLKPTSDVFNSLISTSLCVGNEMTALSLFEVMERSDDCKPNSKT 180
           +N+ LAM +F +ME+ G+KPT+ VFNSL+   LC  + +TA SLFE+ME S+  KP+++T
Sbjct: 121 QNVPLAMHVFTSMEAHGIKPTASVFNSLLHACLCSNDVITAFSLFEIMESSEGYKPDAET 180

Query: 181 YNAFVLVYAKWGKVKVMQAWASAKRDAGFPADLQSYESLISGCVKARMYDNAERFYEEMV 240
           Y  F++ ++  G    M++W SAK+ AG+ A LQ+YESLISGCVK+  +D+A++FYEE+ 
Sbjct: 181 YETFIIGFSSLGNAVAMKSWYSAKKAAGYCATLQTYESLISGCVKSGDFDSADKFYEEIT 240

Query: 241 SSGFIPNTHILDRMVDGFCEQKDLSRAKEFLLNMIDNGWEISAHIADRLSGLYSGLGMME 300
           S G +PN  IL+ +++GFC Q+  S+AKE L + +D G  IS  +A+++  LYS  G +E
Sbjct: 241 SIGIMPNERILENLLEGFCRQRRFSQAKELLKSFLDVGRGISVKMAEKIVRLYSEYGKVE 300

Query: 301 GIEELLQTLIATNESQEVLLRVHCGIIGMHAKADRLDDMEYAVGRMLKQGISFKSANDVK 360
            +E+LL T++ + +  EV+L+VH GII M+A  +RLDD+EY+VGRMLKQG+SF+  NDV+
Sbjct: 301 EMEDLLSTVVESGQVVEVMLQVHSGIIRMYAALNRLDDVEYSVGRMLKQGLSFRCTNDVE 360

Query: 361 VIIRSYFRREAYDRLELFLEHIKGSYQFTKSTYDVLVTGYNEAGLSEKLDVLLKELGL 419
            +I  YFR+EAYDRL++FLEHIKGS++ +KSTYD+L+ GY  AGLS++LD+++K++ L
Sbjct: 361 KVICCYFRKEAYDRLDIFLEHIKGSHKLSKSTYDLLIAGYRRAGLSQRLDLVIKDMEL 417

[Close]

BLAST of Spo25606.1 vs. ExPASy Swiss-Prot
Match: PP326_ARATH (Pentatricopeptide repeat-containing protein At4g19890 OS=Arabidopsis thaliana GN=At4g19890 PE=2 SV=1)

HSP 1 Score: 85.1 bits (209), Expect = 2.000e-15
Identity = 59/256 (23.05%), Postives = 119/256 (46.48%), Query Frame = 1


		  
Query: 119 ETRNLELAMRIFMAMESVGLKPTSDVFNSLISTSLCVGNEMTALSLFEVMERSDDCKPNS 178
           E   L  A+ + M M++ GL P+S   N ++  ++ +G    A ++F+ M       P+S
Sbjct: 159 EIGRLNEAVGMVMDMQNQGLTPSSITMNCVLEIAVELGLIEYAENVFDEMSVRG-VVPDS 218

Query: 179 KTYNAFVLVYAKWGKVKVMQAWASAKRDAGFPADLQSYESLISGCVKARMYDNAERFYEE 238
            +Y   V+   + GK++    W +     GF  D  +   +++   +  + + A  ++ +
Sbjct: 219 SSYKLMVIGCFRDGKIQEADRWLTGMIQRGFIPDNATCTLILTALCENGLVNRAIWYFRK 278

Query: 239 MVSSGFIPNTHILDRMVDGFCEQKDLSRAKEFLLNMIDNGWEISAHIADRLSGLYSGLGM 298
           M+  GF PN      ++DG C++  + +A E L  M+ NGW+ + +    L       G 
Sbjct: 279 MIDLGFKPNLINFTSLIDGLCKKGSIKQAFEMLEEMVRNGWKPNVYTHTALIDGLCKRGW 338

Query: 299 MEGIEELLQTLIATNESQEVLLRVHCGIIGMHAKADRLDDMEYAVGRMLKQGISFKSAND 358
            E    L   L+  +++ +  +  +  +IG + K D+L+  E    RM +QG+ F + N 
Sbjct: 339 TEKAFRLFLKLV-RSDTYKPNVHTYTSMIGGYCKEDKLNRAEMLFSRMKEQGL-FPNVNT 398

Query: 359 VKVIIRSYFRREAYDR 375
              +I  + +  ++ R
Sbjct: 399 YTTLINGHCKAGSFGR 411

[Close]

BLAST of Spo25606.1 vs. ExPASy Swiss-Prot
Match: PP281_ARATH (Pentatricopeptide repeat-containing protein At3g53700, chloroplastic OS=Arabidopsis thaliana GN=MEE40 PE=2 SV=1)

HSP 1 Score: 80.5 bits (197), Expect = 4.900e-14
Identity = 67/278 (24.10%), Postives = 119/278 (42.81%), Query Frame = 1


		  
Query: 106 NQELYTELISLCGETRNLELAMRIFMAMESVGLKPTSDVFNSLISTSLCVGNEMTALSLF 165
           N   Y  LIS   +   +E A  +   + S G+ P    FNSLI       N   A+ LF
Sbjct: 364 NTVTYNTLISTLCKENQVEEATELARVLTSKGILPDVCTFNSLIQGLCLTRNHRVAMELF 423

Query: 166 EVMERSDDCKPNSKTYNAFVLVYAKWGKVKVMQAWASAKRDAGFPADLQSYESLISGCVK 225
           E M RS  C+P+  TYN  +      GK+            +G    + +Y +LI G  K
Sbjct: 424 EEM-RSKGCEPDEFTYNMLIDSLCSKGKLDEALNMLKQMELSGCARSVITYNTLIDGFCK 483

Query: 226 ARMYDNAERFYEEMVSSGFIPNTHILDRMVDGFCEQKDLSRAKEFLLNMIDNGWEISAHI 285
           A     AE  ++EM   G   N+   + ++DG C+ + +  A + +  MI  G +   + 
Sbjct: 484 ANKTREAEEIFDEMEVHGVSRNSVTYNTLIDGLCKSRRVEDAAQLMDQMIMEGQKPDKYT 543

Query: 286 ADRLSGLYSGLGMMEGIEELLQTLIATNESQEVLLRVHCGIIGMHAKADRLDDMEYAVGR 345
            + L   +   G ++   +++Q +  T+   E  +  +  +I    KA R++     +  
Sbjct: 544 YNSLLTHFCRGGDIKKAADIVQAM--TSNGCEPDIVTYGTLISGLCKAGRVEVASKLLRS 603

Query: 346 MLKQGISFKSANDVKVIIRSYFRREAYDRLELFLEHIK 384
           +  +GI+        VI   + +R+  + + LF E ++
Sbjct: 604 IQMKGINLTPHAYNPVIQGLFRKRKTTEAINLFREMLE 638

[Close]

BLAST of Spo25606.1 vs. ExPASy Swiss-Prot
Match: PP395_ARATH (Pentatricopeptide repeat-containing protein At5g21222 OS=Arabidopsis thaliana GN=ATC401 PE=2 SV=1)

HSP 1 Score: 77.8 bits (190), Expect = 3.200e-13
Identity = 76/349 (21.78%), Postives = 153/349 (43.84%), Query Frame = 1


		  
Query: 72  SWDSLLCALNSSSTSKANLALEWRLEKLLKHNERNQELYTELISLCGETRNLELAMRIFM 131
           ++ +L+ AL       + L+L  ++EK     + +  L+  +I+   E+ NL+ AM+IF 
Sbjct: 356 TYTTLVTALTRQKHFHSLLSLISKVEK--NGLKPDTILFNAIINASSESGNLDQAMKIFE 415

Query: 132 AMESVGLKPTSDVFNSLISTSLCVGNEMTALSLFEVMERSDDCKPNSKTYNAFVLVYAKW 191
            M+  G KPT+  FN+LI     +G    +  L ++M R +  +PN +T N  +LV A  
Sbjct: 416 KMKESGCKPTASTFNTLIKGYGKIGKLEESSRLLDMMLRDEMLQPNDRTCN--ILVQAWC 475

Query: 192 GKVKVMQAW--ASAKRDAGFPADLQSYESLISGCVKARMYDNAE-RFYEEMVSSGFIPNT 251
            + K+ +AW      +  G   D+ ++ +L     +      AE      M+ +   PN 
Sbjct: 476 NQRKIEEAWNIVYKMQSYGVKPDVVTFNTLAKAYARIGSTCTAEDMIIPRMLHNKVKPNV 535

Query: 252 HILDRMVDGFCEQKDLSRAKEFLLNMIDNGWEISAHIADRLSGLYSGLGMMEGIEELLQT 311
                +V+G+CE+  +  A  F   M + G   +  + + L   +  +  M+G+ E++  
Sbjct: 536 RTCGTIVNGYCEEGKMEEALRFFYRMKELGVHPNLFVFNSLIKGFLNINDMDGVGEVVDL 595

Query: 312 LIATNESQEVLLRVHCGIIGMHAKADRLDDMEYAVGRMLKQGISFKSANDVKVIIRSYFR 371
           +       +V+      ++   +    +   E     ML+ GI     +   ++ + Y R
Sbjct: 596 MEEFGVKPDVV--TFSTLMNAWSSVGDMKRCEEIYTDMLEGGID-PDIHAFSILAKGYAR 655

Query: 372 REAYDRLELFLEHI-KGSYQFTKSTYDVLVTGYNEAGLSEKLDVLLKEL 417
               ++ E  L  + K   +     Y  +++G+  AG  +K   + K++
Sbjct: 656 AGEPEKAEQILNQMRKFGVRPNVVIYTQIISGWCSAGEMKKAMQVYKKM 697

[Close]

BLAST of Spo25606.1 vs. ExPASy Swiss-Prot
Match: PP399_ARATH (Pentatricopeptide repeat-containing protein At5g27270 OS=Arabidopsis thaliana GN=EMB976 PE=2 SV=2)

HSP 1 Score: 74.7 bits (182), Expect = 2.700e-12
Identity = 47/197 (23.86%), Postives = 89/197 (45.18%), Query Frame = 1


		  
Query: 106  NQELYTELISLCGETRNLELAMRIFMAMESVGLKPTSDVFNSLISTSLCVGNEMTALSLF 165
            ++++YT +I   G+   +  A+ +F  M+  G+KP +  +N ++              L 
Sbjct: 843  DEKIYTNMIMHYGKGGKMSEALSLFSEMQKKGIKPGTPSYNMMVKICATSRLHHEVDELL 902

Query: 166  EVMERSDDCKPNSKTYNAFVLVYAKWGKVKVMQAWASAKRDAGFPADLQSYESLISGCVK 225
            + MER+  C   S TY   + VYA+  +    +   +  ++ G P     + SL+S  VK
Sbjct: 903  QAMERNGRCTDLS-TYLTLIQVYAESSQFAEAEKTITLVKEKGIPLSHSHFSSLLSALVK 962

Query: 226  ARMYDNAERFYEEMVSSGFIPNTHILDRMVDGFCEQKDLSRAKEFLLNMIDNGWEISAHI 285
            A M + AER Y +M  +G  P++     ++ G+    D  +   F   MI +  E    +
Sbjct: 963  AGMMEEAERTYCKMSEAGISPDSACKRTILKGYMTCGDAEKGILFYEKMIRSSVEDDRFV 1022

Query: 286  ADRLSGLYSGLGMMEGI 303
            +  +  LY  +G  + +
Sbjct: 1023 SSVVEDLYKAVGKEQDV 1038

[Close]

BLAST of Spo25606.1 vs. ExPASy Swiss-Prot
Match: PP340_ARATH (Pentatricopeptide repeat-containing protein At4g28010 OS=Arabidopsis thaliana GN=At4g28010 PE=2 SV=1)

HSP 1 Score: 73.9 bits (180), Expect = 4.600e-12
Identity = 50/172 (29.07%), Postives = 84/172 (48.84%), Query Frame = 1


		  
Query: 105 RNQELYTELISLCGETRNLELAMRIFMAMESVGLKPTSDVFNSLISTSLCVGNEMTALSL 164
           RN + YT +I    +T  L +A  +   M    L+P+   +N L+S+    G+   A  L
Sbjct: 492 RNSDTYTAMIDGFCKTGMLNVAKGLLCKMRVSELQPSVFDYNCLLSSLCKEGSLDQAWRL 551

Query: 165 FEVMERSDDCKPNSKTYNAFVLVYAKWGKVKVMQAWASAKRDAGFPADLQSYESLISGCV 224
           FE M+R D+  P+  ++N  +    K G +K  ++       AG   DL +Y  LI+  +
Sbjct: 552 FEEMQR-DNNFPDVVSFNIMIDGSLKAGDIKSAESLLVGMSRAGLSPDLFTYSKLINRFL 611

Query: 225 KARMYDNAERFYEEMVSSGFIPNTHILDRMVDGFCEQKDLSRAKEFLLNMID 277
           K    D A  F+++MV SGF P+ HI D ++     Q +  +  E +  ++D
Sbjct: 612 KLGYLDEAISFFDKMVDSGFEPDAHICDSVLKYCISQGETDKLTELVKKLVD 662

[Close]

BLAST of Spo25606.1 vs. TAIR (Arabidopsis)
Match: AT4G19890.1 (Pentatricopeptide repeat (PPR-like) superfamily protein)

HSP 1 Score: 85.1 bits (209), Expect = 1.100e-16
Identity = 59/256 (23.05%), Postives = 119/256 (46.48%), Query Frame = 1


		  
Query: 119 ETRNLELAMRIFMAMESVGLKPTSDVFNSLISTSLCVGNEMTALSLFEVMERSDDCKPNS 178
           E   L  A+ + M M++ GL P+S   N ++  ++ +G    A ++F+ M       P+S
Sbjct: 159 EIGRLNEAVGMVMDMQNQGLTPSSITMNCVLEIAVELGLIEYAENVFDEMSVRG-VVPDS 218

Query: 179 KTYNAFVLVYAKWGKVKVMQAWASAKRDAGFPADLQSYESLISGCVKARMYDNAERFYEE 238
            +Y   V+   + GK++    W +     GF  D  +   +++   +  + + A  ++ +
Sbjct: 219 SSYKLMVIGCFRDGKIQEADRWLTGMIQRGFIPDNATCTLILTALCENGLVNRAIWYFRK 278

Query: 239 MVSSGFIPNTHILDRMVDGFCEQKDLSRAKEFLLNMIDNGWEISAHIADRLSGLYSGLGM 298
           M+  GF PN      ++DG C++  + +A E L  M+ NGW+ + +    L       G 
Sbjct: 279 MIDLGFKPNLINFTSLIDGLCKKGSIKQAFEMLEEMVRNGWKPNVYTHTALIDGLCKRGW 338

Query: 299 MEGIEELLQTLIATNESQEVLLRVHCGIIGMHAKADRLDDMEYAVGRMLKQGISFKSAND 358
            E    L   L+  +++ +  +  +  +IG + K D+L+  E    RM +QG+ F + N 
Sbjct: 339 TEKAFRLFLKLV-RSDTYKPNVHTYTSMIGGYCKEDKLNRAEMLFSRMKEQGL-FPNVNT 398

Query: 359 VKVIIRSYFRREAYDR 375
              +I  + +  ++ R
Sbjct: 399 YTTLINGHCKAGSFGR 411

[Close]

BLAST of Spo25606.1 vs. TAIR (Arabidopsis)
Match: AT3G53700.1 (Pentatricopeptide repeat (PPR) superfamily protein)

HSP 1 Score: 80.5 bits (197), Expect = 2.800e-15
Identity = 67/278 (24.10%), Postives = 119/278 (42.81%), Query Frame = 1


		  
Query: 106 NQELYTELISLCGETRNLELAMRIFMAMESVGLKPTSDVFNSLISTSLCVGNEMTALSLF 165
           N   Y  LIS   +   +E A  +   + S G+ P    FNSLI       N   A+ LF
Sbjct: 364 NTVTYNTLISTLCKENQVEEATELARVLTSKGILPDVCTFNSLIQGLCLTRNHRVAMELF 423

Query: 166 EVMERSDDCKPNSKTYNAFVLVYAKWGKVKVMQAWASAKRDAGFPADLQSYESLISGCVK 225
           E M RS  C+P+  TYN  +      GK+            +G    + +Y +LI G  K
Sbjct: 424 EEM-RSKGCEPDEFTYNMLIDSLCSKGKLDEALNMLKQMELSGCARSVITYNTLIDGFCK 483

Query: 226 ARMYDNAERFYEEMVSSGFIPNTHILDRMVDGFCEQKDLSRAKEFLLNMIDNGWEISAHI 285
           A     AE  ++EM   G   N+   + ++DG C+ + +  A + +  MI  G +   + 
Sbjct: 484 ANKTREAEEIFDEMEVHGVSRNSVTYNTLIDGLCKSRRVEDAAQLMDQMIMEGQKPDKYT 543

Query: 286 ADRLSGLYSGLGMMEGIEELLQTLIATNESQEVLLRVHCGIIGMHAKADRLDDMEYAVGR 345
            + L   +   G ++   +++Q +  T+   E  +  +  +I    KA R++     +  
Sbjct: 544 YNSLLTHFCRGGDIKKAADIVQAM--TSNGCEPDIVTYGTLISGLCKAGRVEVASKLLRS 603

Query: 346 MLKQGISFKSANDVKVIIRSYFRREAYDRLELFLEHIK 384
           +  +GI+        VI   + +R+  + + LF E ++
Sbjct: 604 IQMKGINLTPHAYNPVIQGLFRKRKTTEAINLFREMLE 638

[Close]

BLAST of Spo25606.1 vs. TAIR (Arabidopsis)
Match: AT5G21222.1 (protein kinase family protein)

HSP 1 Score: 77.8 bits (190), Expect = 1.800e-14
Identity = 76/349 (21.78%), Postives = 153/349 (43.84%), Query Frame = 1


		  
Query: 72  SWDSLLCALNSSSTSKANLALEWRLEKLLKHNERNQELYTELISLCGETRNLELAMRIFM 131
           ++ +L+ AL       + L+L  ++EK     + +  L+  +I+   E+ NL+ AM+IF 
Sbjct: 356 TYTTLVTALTRQKHFHSLLSLISKVEK--NGLKPDTILFNAIINASSESGNLDQAMKIFE 415

Query: 132 AMESVGLKPTSDVFNSLISTSLCVGNEMTALSLFEVMERSDDCKPNSKTYNAFVLVYAKW 191
            M+  G KPT+  FN+LI     +G    +  L ++M R +  +PN +T N  +LV A  
Sbjct: 416 KMKESGCKPTASTFNTLIKGYGKIGKLEESSRLLDMMLRDEMLQPNDRTCN--ILVQAWC 475

Query: 192 GKVKVMQAW--ASAKRDAGFPADLQSYESLISGCVKARMYDNAE-RFYEEMVSSGFIPNT 251
            + K+ +AW      +  G   D+ ++ +L     +      AE      M+ +   PN 
Sbjct: 476 NQRKIEEAWNIVYKMQSYGVKPDVVTFNTLAKAYARIGSTCTAEDMIIPRMLHNKVKPNV 535

Query: 252 HILDRMVDGFCEQKDLSRAKEFLLNMIDNGWEISAHIADRLSGLYSGLGMMEGIEELLQT 311
                +V+G+CE+  +  A  F   M + G   +  + + L   +  +  M+G+ E++  
Sbjct: 536 RTCGTIVNGYCEEGKMEEALRFFYRMKELGVHPNLFVFNSLIKGFLNINDMDGVGEVVDL 595

Query: 312 LIATNESQEVLLRVHCGIIGMHAKADRLDDMEYAVGRMLKQGISFKSANDVKVIIRSYFR 371
           +       +V+      ++   +    +   E     ML+ GI     +   ++ + Y R
Sbjct: 596 MEEFGVKPDVV--TFSTLMNAWSSVGDMKRCEEIYTDMLEGGID-PDIHAFSILAKGYAR 655

Query: 372 REAYDRLELFLEHI-KGSYQFTKSTYDVLVTGYNEAGLSEKLDVLLKEL 417
               ++ E  L  + K   +     Y  +++G+  AG  +K   + K++
Sbjct: 656 AGEPEKAEQILNQMRKFGVRPNVVIYTQIISGWCSAGEMKKAMQVYKKM 697

[Close]

BLAST of Spo25606.1 vs. TAIR (Arabidopsis)
Match: AT5G27270.1 (Tetratricopeptide repeat (TPR)-like superfamily protein)

HSP 1 Score: 74.7 bits (182), Expect = 1.500e-13
Identity = 47/197 (23.86%), Postives = 89/197 (45.18%), Query Frame = 1


		  
Query: 106  NQELYTELISLCGETRNLELAMRIFMAMESVGLKPTSDVFNSLISTSLCVGNEMTALSLF 165
            ++++YT +I   G+   +  A+ +F  M+  G+KP +  +N ++              L 
Sbjct: 843  DEKIYTNMIMHYGKGGKMSEALSLFSEMQKKGIKPGTPSYNMMVKICATSRLHHEVDELL 902

Query: 166  EVMERSDDCKPNSKTYNAFVLVYAKWGKVKVMQAWASAKRDAGFPADLQSYESLISGCVK 225
            + MER+  C   S TY   + VYA+  +    +   +  ++ G P     + SL+S  VK
Sbjct: 903  QAMERNGRCTDLS-TYLTLIQVYAESSQFAEAEKTITLVKEKGIPLSHSHFSSLLSALVK 962

Query: 226  ARMYDNAERFYEEMVSSGFIPNTHILDRMVDGFCEQKDLSRAKEFLLNMIDNGWEISAHI 285
            A M + AER Y +M  +G  P++     ++ G+    D  +   F   MI +  E    +
Sbjct: 963  AGMMEEAERTYCKMSEAGISPDSACKRTILKGYMTCGDAEKGILFYEKMIRSSVEDDRFV 1022

Query: 286  ADRLSGLYSGLGMMEGI 303
            +  +  LY  +G  + +
Sbjct: 1023 SSVVEDLYKAVGKEQDV 1038

[Close]

BLAST of Spo25606.1 vs. TAIR (Arabidopsis)
Match: AT5G59900.1 (Pentatricopeptide repeat (PPR) superfamily protein)

HSP 1 Score: 73.9 bits (180), Expect = 2.600e-13
Identity = 58/242 (23.97%), Postives = 103/242 (42.56%), Query Frame = 1


		  
Query: 176 PNSKTYNAFVLVYAKWGKVKVMQAWASAKRDAGFPADLQSYESLISGCVKARMYDNAERF 235
           P+    ++ V    K GK++          D G   +L  Y +LI    K R +  AE  
Sbjct: 330 PSEAAVSSLVEGLRKRGKIEEALNLVKRVVDFGVSPNLFVYNALIDSLCKGRKFHEAELL 389

Query: 236 YEEMVSSGFIPNTHILDRMVDGFCEQKDLSRAKEFLLNMIDNGWEISAHIADRLSGLYSG 295
           ++ M   G  PN      ++D FC +  L  A  FL  M+D G ++S +  + L   +  
Sbjct: 390 FDRMGKIGLRPNDVTYSILIDMFCRRGKLDTALSFLGEMVDTGLKLSVYPYNSLINGHCK 449

Query: 296 LGMMEGIEELLQTLIATNESQEVLLRVHCGIIGMHAKADRLDDMEYAVGRMLKQGISFKS 355
            G +   E  +  +I  N+  E  +  +  ++G +    +++        M  +GI+  S
Sbjct: 450 FGDISAAEGFMAEMI--NKKLEPTVVTYTSLMGGYCSKGKINKALRLYHEMTGKGIA-PS 509

Query: 356 ANDVKVIIRSYFRREAY-DRLELFLEHIKGSYQFTKSTYDVLVTGYNEAGLSEKLDVLLK 415
                 ++   FR     D ++LF E  + + +  + TY+V++ GY E G   K    LK
Sbjct: 510 IYTFTTLLSGLFRAGLIRDAVKLFNEMAEWNVKPNRVTYNVMIEGYCEEGDMSKAFEFLK 568

Query: 416 EL 417
           E+
Sbjct: 570 EM 568

The following BLAST results are available for this feature:

BLAST of Spo25606.1 vs. NCBI nr
BLAST of Spo25606.1 vs. UniProtKB/TrEMBL
BLAST of Spo25606.1 vs. ExPASy Swiss-Prot
BLAST of Spo25606.1 vs. TAIR (Arabidopsis)

BLAST of Spo25606.1 vs. NCBI nr
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. NCBI nr)
Total hits: 5


Match Name	E-value	Identity	Description
gi\|902230174\|gb\|KNA21749.1\|	6.4e-240	100.	hypothetical protein SOVF_0404...	[more]
gi\|731317130\|ref\|XP_010667844.1\|	5.0e-192	81.0	PREDICTED: pentatricopeptide r...	[more]
gi\|359476047\|ref\|XP_002281582.2\|	3.2e-122	54.5	PREDICTED: pentatricopeptide r...	[more]
gi\|147812171\|emb\|CAN61515.1\|	1.5e-119	54.8	hypothetical protein VITISV_03...	[more]
gi\|719994228\|ref\|XP_010254117.1\|	4.6e-113	52.7	PREDICTED: pentatricopeptide r...	[more]

BLAST of Spo25606.1 vs. UniProtKB/TrEMBL
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. UniprotKB/TrEMBL)
Total hits: 5


Match Name	E-value	Identity	Description
A0A0K9RS68_SPIOL	4.5e-240	100.	Uncharacterized protein OS=Spi...	[more]
A0A0J8FQU2_BETVU	3.5e-192	81.0	Uncharacterized protein OS=Bet...	[more]
D7SUE7_VITVI	2.2e-122	54.5	Putative uncharacterized prote...	[more]
A5BLD0_VITVI	1.0e-119	54.8	Putative uncharacterized prote...	[more]
A0A061FZA9_THECC	1.9e-110	49.0	Tetratricopeptide repeat-like ...	[more]

BLAST of Spo25606.1 vs. ExPASy Swiss-Prot
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. ExPASy SwissProt)
Total hits: 5


Match Name	E-value	Identity	Description
PP326_ARATH	2.0e-15	23.0	Pentatricopeptide repeat-conta...	[more]
PP281_ARATH	4.9e-14	24.1	Pentatricopeptide repeat-conta...	[more]
PP395_ARATH	3.2e-13	21.7	Pentatricopeptide repeat-conta...	[more]
PP399_ARATH	2.7e-12	23.8	Pentatricopeptide repeat-conta...	[more]
PP340_ARATH	4.6e-12	29.0	Pentatricopeptide repeat-conta...	[more]

BLAST of Spo25606.1 vs. TAIR (Arabidopsis)
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. TAIR)
Total hits: 5


Match Name	E-value	Identity	Description
AT4G19890.1	1.1e-16	23.0	Pentatricopeptide repeat (PPR-...	[more]
AT3G53700.1	2.8e-15	24.1	Pentatricopeptide repeat (PPR)...	[more]
AT5G21222.1	1.8e-14	21.7	protein kinase family protein	[more]
AT5G27270.1	1.5e-13	23.8	Tetratricopeptide repeat (TPR)...	[more]
AT5G59900.1	2.6e-13	23.9	Pentatricopeptide repeat (PPR)...	[more]

InterPro

Analysis Name: InterPro Annotations of S. oleracea
Date Performed: 2018-06-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR002885	Pentatricopeptide repeat	PFAM	PF01535	PPR	coord: 254..278 score: 0.77coord: 215..244 score: 3.
IPR002885	Pentatricopeptide repeat	PFAM	PF13812	PPR_3	coord: 110..151 score: 7.1
IPR002885	Pentatricopeptide repeat	TIGRFAMs	TIGR00756	TIGR00756	coord: 109..141 score: 0.0016coord: 215..248 score: 7.
IPR002885	Pentatricopeptide repeat	PROFILE	PS51375	PPR	coord: 177..211 score: 6.412coord: 106..140 score: 9.865coord: 319..353 score: 5.415coord: 389..422 score: 5.623coord: 247..281 score: 8.484coord: 141..171 score: 6.018coord: 212..246 score: 12
None	No IPR available	PANTHER	PTHR24015	FAMILY NOT NAMED	coord: 89..413 score: 8.1E
None	No IPR available	PANTHER	PTHR24015:SF741	SUBFAMILY NOT NAMED	coord: 89..413 score: 8.1E

GO Annotation

GO Assignments

This mRNA is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0015031	protein transport
cellular_component	GO:0030117	membrane coat