Overview
Sequences
The following sequences are available for this feature:
Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.TCCCAACCCTCTTTCACTTTCCCCAAAATAACCGCCCTGTCTTCCTCGAAAACCCCACTCTCATTTAAAGAAAAAAGAAAAACAAAATAACACGTAATAAATCCCCTCTCATCTCTTCCCCTTCTCCTCCCCCCTTCCTATATATCCCCCTCTCATTCTTTCTCTCTCCTTTATTTTCCCCACCTCCAAAAAAAAAAAGAAACAAATTTAAAAGAAAAAAGTAAGAGAAAATAAAAATGGGAATGGCGGACTACTACGAAGTACTCAAAGTCTCGTCAGCAGCAAATGAGGAAGAACTGAGAAGAGCATACAAGAAGCTAGCGATGAGGTGGCACCCTGACAAACACCCAAGTGGCGCTAAAGGATTAGCGGAGGCCAAGTTCAAGCAGATCTGTGAAGCTTATGATGTTTTAAGCGACGCTCAGAAGCGGCAGATCTACGATCTCTACGGAGAAGATGGGCTTAAATACGACGTCTCTTCTCCTTCTGCTGCTGCCGCTGCTACTCGCGGTGGTGGACGTGGTGTTGGTAAGGGTGCTTCGTTTAAGTATGGGAATTCTAGGGTGGTGAATGATGATATTTTTGATGGGTTTTTTGATGATATCGGTTCACCCCCGAAATCGGATAACCCGAAAAAGTATAGTGAAAATGGTAACCGGAAGATGGGTCGGAGTGATACGGCGGAGAAGAAGGCGGAGCCACTAGAGACTAAGTTGGTTTGTAGCTTGGAGGAGTTGTTTAAGGGTTCTAAGCGTAAGATGAAGATTGCTCGTCTGGTTCCTGATTTTTCTGGGTTAGTTTTTTTTTATTATTTTTTTTTATAATTTTTTTAAATTATTATTTCCTTTTTCGAAATTATTTGATTATTATTGGTATAATTTTGGAGGTTATCTGTATTAGGATTTTGGTATTTTTGTTTGTATTGTGGCTGTGTTTGACTGTGTCATGGAAAGGGGGTTACCGAGGGTGGACTCGTAGAGTAATCAGTGATGAAAACGAGATTTGATTTTAGGTCTTCGTTTTTTTAGCTGCTTTTATTCCATCTTTGATGTTTTGTGGTTGAAATTAAAAATGGGTTTTAGACTTTTAGTTTTGGCAAAAAATTAAATAATTACTCCTTAATTTTTTTGGTTTTAGGTAGAAAGTGTTGGTGTAGTGATTAATGATTGGTTCTGCAAATAAAATTTAATTTTGAGAATTTATTTGATTTTAAGTATTTTAAAAAATGGTTTGAGTTGGTGGGCGATTTAAATTTGAGTCAGAATATGGACATCGGGCCATGTGAAATGGACTGGCTCGGATCACATGTTTGGGTTATTGGTTTATAAATTTTTTAATTTTAATGTTATTTTCTATTATTACCCTGTTTTAAAATGAGCTATGTCAATTTGAAAAGGACAAAAATCATATAATATGATGAAAATATTCATATGAATTATTTTTGTAATGCGGTAGAAATGCTAAAAAAGTTGTCAAAATTATGCAAGACAATGCATTAAATAAATTTTATACGTATCAAATTATAGAATAAGTTCCTATTTAGAAAAAAGATCATGCATATAATTTTTGATACGAGGGAGTATAATTGTATAAATGTTGGTGACCCCTTAGCGAAAGGAAGTCGTAAACTGTTATGGAGTTGTTGTTTTTTTTAAAACAATTTAAATTACAAACTATCGGTCTTAATCACTGATTGAGATATCATTATTACTAATCATTAGTTAAAGCAAACCATTTTAGTTACAAACGAAGATTTAAATTATTAACTCTCAATCTTAACTACAGGTCAAGACATCATTGTTTCTATAGTTAGTTAAAAGTTAAAACAAACAATTTTACATACAGAAGAGAATACAAAGTATGTTAAATCAAAGGGCAATTTTGTCATTCCAGTATTTGGCGAATTATTATTCCGTACTCGTATTTGGTAAATAACCAAACTCGAAAAGAAAACTGAAGAATCAAAGTGGTGGGATGCAATTATCTTTTTGACATGGTGACCTTGTTGTTTTTCCAAGCAAGGAGTGAAACTCACGTTTATGGGTGGTTATTTCTGTTGACTGGTCATTGATGATTTCCGTACTTGGTAGATCAAAGTGGCCAAGTGGGTTACTAGTATCTTGTAGTTGGTCAACTGTCTACATTACGAAAGTTAAATGGATTCTAATGGAGTAAACCATACTTACTCATCTGATTTAGATAACTTTCCCAGTAAAAGGAAAAATTAAGATGCTGTTAAAACAAGTAAATCAGTGGTTGAAGCGAGTTCAGAATAGAGCGTAAAAAACTTGCAAACTTGTTTGATTAAAGTAGTTAACTTGTTATGAATCTGCGCTAAAATGTTGATTACTGATGGAGTAATTGTGCCCTGTTTAGTCTTCCATGCTATGGGTTGTGCTTTCAAATTGGGATGTTTTAACAGTTTTGTTAGTTTTGTGTAAGCAGATTGTGATTTGTTTGAGAGTGATGGATAGCTCAGTTGGTTAGAGCTTTCATCCCGGTTCCAGGTGATCCTGGGATCGATTCTCATCCCTGCCCTTGTGGCTGATTTGTTTTTCTGAATGTATACGTGAGACTCGTATTTGGTTGTCTGGTATTATTTGCCATAGGTTCCATCCTTTCAAAAATAGTGACTGTCGGCATGTCATTTATTGGTCCTTGATGTGTTAAAGTTTTGTAGGCAAGATCAACTATTTGAAATTTGACTATTTTGTCTCTGTTTAAAACATGAATTGACTCATCGTCTAACCATCTTGCAGCAAGGCTACGACTGTGGATGAAGTACTGGCAATTGAGATCAGGCCTGGTTGGAAGAAAGGTACTAAAATCACATTCCCAGAGAAGGGAAACCAAGAACCAGGCCTCTTGGCTGGTGATCTTATCTTTGTTATTGATGAGAAACCTCACCCGACTTTCAAGAGAGACGGGAATGATCTTCTTGTCAACCTGAAAGTGTCACTCTTGGAGGCTCTCACTGGTAAGACAGTTACTCTGAAGACATTGGATGGAAGAAATCTGGACATTGAAGTCTCAGATATTGTGAAACCAGGACATGAAGTCGTCATCTCAGGTGAAGGAATGCCAATATCCAAGGAACCTAAAACACGAGGAAACTTGAGAATCAAGTTCGATGTTAAGTTCCCATCCAGGCTATCTGCAGATCAGAAAAGTGATCTAAGAAGGGTACTAGGAAGAAGCTCATGATCTGGTGTTTATTTATATAAGTATAAAAACTGGGTTTATCTACGCAATTAAGTATATTTAATTAACACTGACACTAAAATGTAAATAGTTGGGCAAGTGTTTTGTTTGGAAACTTTATTTTTGGGAGGGGTTTCTTTATAACTGTGCATACTAGGGCAGTTTGCAGGTTTACAGTTGCGAATAGCAACCAATATTTACAGCAATTTAGCGTAGTGAGATCAGAGAAGGAGGCATCTTTGAGCTTCATCTCCTCTGTTAATTATCCGAAACTTTGTATATCGGTACTCTAGTCTTTTGTTTTACGCTTTCTTGTGTTTATTTTTGCTTGGAAAATGCTAACAATGTAATGCTAAGTTTGGGTTACATTTCTTTAATGGCCCATTTAGCAATATTGTATCTTTTTTTGTTCTCGAATTCTAAAATTTGGGGTTTCTTCATTTTCCCTTCATTTTAAACTTGAATTAAGCTGCATTCTATTCACCTGATTTTCACTTATTTTTT TCCCAACCCTCTTTCACTTTCCCCAAAATAACCGCCCTGTCTTCCTCGAAAACCCCACTCTCATTTAAAGAAAAAAGAAAAACAAAATAACACGTAATAAATCCCCTCTCATCTCTTCCCCTTCTCCTCCCCCCTTCCTATATATCCCCCTCTCATTCTTTCTCTCTCCTTTATTTTCCCCACCTCCAAAAAAAAAAAGAAACAAATTTAAAAGAAAAAAGTAAGAGAAAATAAAAATGGGAATGGCGGACTACTACGAAGTACTCAAAGTCTCGTCAGCAGCAAATGAGGAAGAACTGAGAAGAGCATACAAGAAGCTAGCGATGAGGTGGCACCCTGACAAACACCCAAGTGGCGCTAAAGGATTAGCGGAGGCCAAGTTCAAGCAGATCTGTGAAGCTTATGATGTTTTAAGCGACGCTCAGAAGCGGCAGATCTACGATCTCTACGGAGAAGATGGGCTTAAATACGACGTCTCTTCTCCTTCTGCTGCTGCCGCTGCTACTCGCGGTGGTGGACGTGGTGTTGGTAAGGGTGCTTCGTTTAAGTATGGGAATTCTAGGGTGGTGAATGATGATATTTTTGATGGGTTTTTTGATGATATCGGTTCACCCCCGAAATCGGATAACCCGAAAAAGTATAGTGAAAATGGTAACCGGAAGATGGGTCGGAGTGATACGGCGGAGAAGAAGGCGGAGCCACTAGAGACTAAGTTGGTTTGTAGCTTGGAGGAGTTGTTTAAGGGTTCTAAGCGTAAGATGAAGATTGCTCGTCTGGTTCCTGATTTTTCTGGCAAGGCTACGACTGTGGATGAAGTACTGGCAATTGAGATCAGGCCTGGTTGGAAGAAAGGTACTAAAATCACATTCCCAGAGAAGGGAAACCAAGAACCAGGCCTCTTGGCTGGTGATCTTATCTTTGTTATTGATGAGAAACCTCACCCGACTTTCAAGAGAGACGGGAATGATCTTCTTGTCAACCTGAAAGTGTCACTCTTGGAGGCTCTCACTGGTAAGACAGTTACTCTGAAGACATTGGATGGAAGAAATCTGGACATTGAAGTCTCAGATATTGTGAAACCAGGACATGAAGTCGTCATCTCAGGTGAAGGAATGCCAATATCCAAGGAACCTAAAACACGAGGAAACTTGAGAATCAAGTTCGATGTTAAGTTCCCATCCAGGCTATCTGCAGATCAGAAAAGTGATCTAAGAAGGGTACTAGGAAGAAGCTCATGATCTGGTGTTTATTTATATAAGTATAAAAACTGGGTTTATCTACGCAATTAAGTATATTTAATTAACACTGACACTAAAATGTAAATAGTTGGGCAAGTGTTTTGTTTGGAAACTTTATTTTTGGGAGGGGTTTCTTTATAACTGTGCATACTAGGGCAGTTTGCAGGTTTACAGTTGCGAATAGCAACCAATATTTACAGCAATTTAGCGTAGTGAGATCAGAGAAGGAGGCATCTTTGAGCTTCATCTCCTCTGTTAATTATCCGAAACTTTGTATATCGGTACTCTAGTCTTTTGTTTTACGCTTTCTTGTGTTTATTTTTGCTTGGAAAATGCTAACAATGTAATGCTAAGTTTGGGTTACATTTCTTTAATGGCCCATTTAGCAATATTGTATCTTTTTTTGTTCTCGAATTCTAAAATTTGGGGTTTCTTCATTTTCCCTTCATTTTAAACTTGAATTAAGCTGCATTCTATTCACCTGATTTTCACTTATTTTTT ATGGGAATGGCGGACTACTACGAAGTACTCAAAGTCTCGTCAGCAGCAAATGAGGAAGAACTGAGAAGAGCATACAAGAAGCTAGCGATGAGGTGGCACCCTGACAAACACCCAAGTGGCGCTAAAGGATTAGCGGAGGCCAAGTTCAAGCAGATCTGTGAAGCTTATGATGTTTTAAGCGACGCTCAGAAGCGGCAGATCTACGATCTCTACGGAGAAGATGGGCTTAAATACGACGTCTCTTCTCCTTCTGCTGCTGCCGCTGCTACTCGCGGTGGTGGACGTGGTGTTGGTAAGGGTGCTTCGTTTAAGTATGGGAATTCTAGGGTGGTGAATGATGATATTTTTGATGGGTTTTTTGATGATATCGGTTCACCCCCGAAATCGGATAACCCGAAAAAGTATAGTGAAAATGGTAACCGGAAGATGGGTCGGAGTGATACGGCGGAGAAGAAGGCGGAGCCACTAGAGACTAAGTTGGTTTGTAGCTTGGAGGAGTTGTTTAAGGGTTCTAAGCGTAAGATGAAGATTGCTCGTCTGGTTCCTGATTTTTCTGGCAAGGCTACGACTGTGGATGAAGTACTGGCAATTGAGATCAGGCCTGGTTGGAAGAAAGGTACTAAAATCACATTCCCAGAGAAGGGAAACCAAGAACCAGGCCTCTTGGCTGGTGATCTTATCTTTGTTATTGATGAGAAACCTCACCCGACTTTCAAGAGAGACGGGAATGATCTTCTTGTCAACCTGAAAGTGTCACTCTTGGAGGCTCTCACTGGTAAGACAGTTACTCTGAAGACATTGGATGGAAGAAATCTGGACATTGAAGTCTCAGATATTGTGAAACCAGGACATGAAGTCGTCATCTCAGGTGAAGGAATGCCAATATCCAAGGAACCTAAAACACGAGGAAACTTGAGAATCAAGTTCGATGTTAAGTTCCCATCCAGGCTATCTGCAGATCAGAAAAGTGATCTAAGAAGGGTACTAGGAAGAAGCTCATGA MGMADYYEVLKVSSAANEEELRRAYKKLAMRWHPDKHPSGAKGLAEAKFKQICEAYDVLSDAQKRQIYDLYGEDGLKYDVSSPSAAAAATRGGGRGVGKGASFKYGNSRVVNDDIFDGFFDDIGSPPKSDNPKKYSENGNRKMGRSDTAEKKAEPLETKLVCSLEELFKGSKRKMKIARLVPDFSGKATTVDEVLAIEIRPGWKKGTKITFPEKGNQEPGLLAGDLIFVIDEKPHPTFKRDGNDLLVNLKVSLLEALTGKTVTLKTLDGRNLDIEVSDIVKPGHEVVISGEGMPISKEPKTRGNLRIKFDVKFPSRLSADQKSDLRRVLGRSS Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
Homology
BLAST of Spo25786.1 vs. NCBI nr
Match: gi|902181314|gb|KNA09714.1| (hypothetical protein SOVF_151130 [Spinacia oleracea]) HSP 1 Score: 658.3 bits (1697), Expect = 7.200e-186 Identity = 333/333 (100.00%), Postives = 333/333 (100.00%), Query Frame = 1
BLAST of Spo25786.1 vs. NCBI nr
Match: gi|731344213|ref|XP_010683291.1| (PREDICTED: dnaJ homolog subfamily B member 4-like [Beta vulgaris subsp. vulgaris]) HSP 1 Score: 485.3 bits (1248), Expect = 8.300e-134 Identity = 259/351 (73.79%), Postives = 284/351 (80.91%), Query Frame = 1
BLAST of Spo25786.1 vs. NCBI nr
Match: gi|590693650|ref|XP_007044393.1| (DNAJ heat shock family protein [Theobroma cacao]) HSP 1 Score: 379.4 bits (973), Expect = 6.400e-102 Identity = 204/327 (62.39%), Postives = 246/327 (75.23%), Query Frame = 1
BLAST of Spo25786.1 vs. NCBI nr
Match: gi|747078504|ref|XP_011086415.1| (PREDICTED: dnaJ homolog subfamily B member 4-like [Sesamum indicum]) HSP 1 Score: 377.5 bits (968), Expect = 2.400e-101 Identity = 208/346 (60.12%), Postives = 247/346 (71.39%), Query Frame = 1
BLAST of Spo25786.1 vs. NCBI nr
Match: gi|255558264|ref|XP_002520159.1| (PREDICTED: dnaJ homolog subfamily B member 1 [Ricinus communis]) HSP 1 Score: 377.1 bits (967), Expect = 3.200e-101 Identity = 205/332 (61.75%), Postives = 244/332 (73.49%), Query Frame = 1
BLAST of Spo25786.1 vs. UniProtKB/TrEMBL
Match: A0A0K9QQY5_SPIOL (Uncharacterized protein OS=Spinacia oleracea GN=SOVF_151130 PE=4 SV=1) HSP 1 Score: 658.3 bits (1697), Expect = 5.000e-186 Identity = 333/333 (100.00%), Postives = 333/333 (100.00%), Query Frame = 1
BLAST of Spo25786.1 vs. UniProtKB/TrEMBL
Match: A0A0J8C541_BETVU (Uncharacterized protein OS=Beta vulgaris subsp. vulgaris GN=BVRB_6g154840 PE=4 SV=1) HSP 1 Score: 485.3 bits (1248), Expect = 5.800e-134 Identity = 259/351 (73.79%), Postives = 284/351 (80.91%), Query Frame = 1
BLAST of Spo25786.1 vs. UniProtKB/TrEMBL
Match: A0A061E5F1_THECC (DNAJ heat shock family protein OS=Theobroma cacao GN=TCM_010025 PE=4 SV=1) HSP 1 Score: 379.4 bits (973), Expect = 4.500e-102 Identity = 204/327 (62.39%), Postives = 246/327 (75.23%), Query Frame = 1
BLAST of Spo25786.1 vs. UniProtKB/TrEMBL
Match: B9S2E0_RICCO (Curved DNA-binding protein, putative OS=Ricinus communis GN=RCOM_0698930 PE=4 SV=1) HSP 1 Score: 377.1 bits (967), Expect = 2.200e-101 Identity = 205/332 (61.75%), Postives = 244/332 (73.49%), Query Frame = 1
BLAST of Spo25786.1 vs. UniProtKB/TrEMBL
Match: B9HLX0_POPTR (DNAJ heat shock family protein OS=Populus trichocarpa GN=POPTR_0008s19860g PE=4 SV=2) HSP 1 Score: 375.6 bits (963), Expect = 6.500e-101 Identity = 199/326 (61.04%), Postives = 243/326 (74.54%), Query Frame = 1
BLAST of Spo25786.1 vs. ExPASy Swiss-Prot
Match: DNJB1_HUMAN (DnaJ homolog subfamily B member 1 OS=Homo sapiens GN=DNAJB1 PE=1 SV=4) HSP 1 Score: 233.4 bits (594), Expect = 3.600e-60 Identity = 143/349 (40.97%), Postives = 207/349 (59.31%), Query Frame = 1
BLAST of Spo25786.1 vs. ExPASy Swiss-Prot
Match: DNJB1_BOVIN (DnaJ homolog subfamily B member 1 OS=Bos taurus GN=DNAJB1 PE=2 SV=3) HSP 1 Score: 233.0 bits (593), Expect = 4.700e-60 Identity = 143/349 (40.97%), Postives = 206/349 (59.03%), Query Frame = 1
BLAST of Spo25786.1 vs. ExPASy Swiss-Prot
Match: DNJB1_MOUSE (DnaJ homolog subfamily B member 1 OS=Mus musculus GN=Dnajb1 PE=1 SV=3) HSP 1 Score: 232.3 bits (591), Expect = 7.900e-60 Identity = 139/349 (39.83%), Postives = 205/349 (58.74%), Query Frame = 1
BLAST of Spo25786.1 vs. ExPASy Swiss-Prot
Match: DNJB4_MOUSE (DnaJ homolog subfamily B member 4 OS=Mus musculus GN=Dnajb4 PE=1 SV=1) HSP 1 Score: 226.9 bits (577), Expect = 3.300e-58 Identity = 137/352 (38.92%), Postives = 202/352 (57.39%), Query Frame = 1
BLAST of Spo25786.1 vs. ExPASy Swiss-Prot
Match: DNJB4_HUMAN (DnaJ homolog subfamily B member 4 OS=Homo sapiens GN=DNAJB4 PE=1 SV=1) HSP 1 Score: 226.1 bits (575), Expect = 5.700e-58 Identity = 135/352 (38.35%), Postives = 203/352 (57.67%), Query Frame = 1
BLAST of Spo25786.1 vs. TAIR (Arabidopsis)
Match: AT1G59725.1 (DNAJ heat shock family protein) HSP 1 Score: 346.3 bits (887), Expect = 2.100e-95 Identity = 185/331 (55.89%), Postives = 233/331 (70.39%), Query Frame = 1
BLAST of Spo25786.1 vs. TAIR (Arabidopsis)
Match: AT1G10350.1 (DNAJ heat shock family protein) HSP 1 Score: 336.3 bits (861), Expect = 2.200e-92 Identity = 184/351 (52.42%), Postives = 241/351 (68.66%), Query Frame = 1
BLAST of Spo25786.1 vs. TAIR (Arabidopsis)
Match: AT3G08910.1 (DNAJ heat shock family protein) HSP 1 Score: 330.9 bits (847), Expect = 9.200e-91 Identity = 176/332 (53.01%), Postives = 233/332 (70.18%), Query Frame = 1
BLAST of Spo25786.1 vs. TAIR (Arabidopsis)
Match: AT2G20560.1 (DNAJ heat shock family protein) HSP 1 Score: 322.8 bits (826), Expect = 2.500e-88 Identity = 170/340 (50.00%), Postives = 233/340 (68.53%), Query Frame = 1
BLAST of Spo25786.1 vs. TAIR (Arabidopsis)
Match: AT3G47940.1 (DNAJ heat shock family protein) HSP 1 Score: 322.0 bits (824), Expect = 4.300e-88 Identity = 175/346 (50.58%), Postives = 238/346 (68.79%), Query Frame = 1
The following BLAST results are available for this feature:
BLAST of Spo25786.1 vs. NCBI nr
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. NCBI nr) Total hits: 5
BLAST of Spo25786.1 vs. UniProtKB/TrEMBL
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. UniprotKB/TrEMBL) Total hits: 5
BLAST of Spo25786.1 vs. ExPASy Swiss-Prot
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. ExPASy SwissProt) Total hits: 5
BLAST of Spo25786.1 vs. TAIR (Arabidopsis)
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. TAIR) Total hits: 5
InterPro
Analysis Name: InterPro Annotations of S. oleracea
Date Performed: 2018-06-29
GO Annotation
GO Assignments
This mRNA is annotated with the following GO terms.
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