Overview
Sequences
The following sequences are available for this feature:
Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.CTAGCATAAACCAGTAGCAGTGTAATTTATCGTCACTCTACAAAAACAGCAAAAATCAAGAAATGATCCACTCAACCTTGCTACCCACCTCAAATTTCACTAACCCTCTTCAATTTCCCACAAAAAAGACCAATCCCCAGTTCAAATCATCAGTTAGTAATACCAAAACCGATGTAGGGTACAATTTAATTCATACACAAACAAATCAGAATCCCCATAAACCCATAAATTTGCAGTCATTAGGATTCTGCAAATGTGGAAGACGACATTTTCTGGAGTCAATTGCGAGCACTGTGCTTCATACTTCACTCCCCTCTCTTGCGTCAGGGTTAGAGCCTGACTCGGCTTCCATGGTATATTTCATCTCTCTTTCTCTCCTTTCGTCCATATTGAGTTCAGATTACACAACCAACGCGACTATTGATTATTTATGGAGGCCTTGAGGGGTTATAATTTTATATCTTTCCTGTTTTCTCCTTTTGGAATAGTTTAATTTGATGATTTTAGCATTTTTGTATGATAGAGTTGAATTGAACACTAGACAATCTTTGGATTGATGATGTAACTGTTGGTTTTTTTGGGAGACTTTGATCTTGATTCATGAGAATTTGAACAAATGTTGGCGTAAAAGTTCTTATATGCACCTATGATGAACTGAGACATAGGGGCACCAAGGCTTTTATTTTGCTCATATGATCATTTTTACTCATTTCAAAGTCTTCAAATGAGTACAAATTAGCAAATTAGAAGAAATACACTTGGAGTGTAAAAGAGGTTATGGCCTTTGTGGGTGGGTATCCTAGGAAGGAGATGAAAGAAAACAACCAAAGATTGGAACTAATTGTCACGTTGATAGTGTAATTTGAACTAGTACTACATGTGGCAACTGAATTCGAAGGGAGTAATTGACTAATTGTTAATAAATCAGAATGGAGAATTGTCTATACTTCACATGTCTATTTGTGCATAATAAAAAGTGGAGCCAAATACATTTTGGATATAATGTTGTTGTGGTCATAGCTGTAAAAAGTTGTTTGTTGCTTTTGAATATGAGATCTTTGGGGTTGGGGTGGACTAAATGCCAACCTTTCAAAGAATTGAGGAGCATGCATTATGTAAAATTCTAATTTTCTCAGCATTTACGCGGTCAGCTGGGTATAATTTAAGATATTCTCTCTTGCTTATGTTGAGCTAGATACTATATTGTACAGTAGCTGAAAGAGGAAGTCAGTAGACTCACTACTAGGTGCAATTCGGGGGGAGAAGTGGGAAATAACCAACTTTTGGCTAGTGTAGCTAATCCTAGTGCCTGCCATCAAGTTTTCTCTTCTTATTGTTGTAGCTAATCCTAGTGCCTGCCATCAAGCTTTTATGCACTCCGATAGTTCGATTTAAATGGTTTTGTGTTTCAATTAGGCAAAATATTTGATTCCTTTCTGGCATGTAGCAAGGGACAGTGGCCACTGGCAAGTGACAGAGTTAGAGAATATACTCCGTCAAATATATGAAAATATATATGGTTCGTTTAATTTGCAATTCCATGATGCTCTGATTTTGTCTCAATAGTTTTGTCATTGTGGAAGGACGGTTTAGATACAAGTATATCTTTCTGAATACCCATGAACAAATTGGCATTGGTCAATCACTTGTAATGGGAAAGGACAATCAAAATGCTATATTTCTGCCCTCAAAAAAAAAATGCTATATTTCTAGTCACAGTGAGGTTTCAATGGTCTTGACTATGATTGGTTAACGCCTTAACAGTAATAAACAGAATGACCAATCATTAGAGTTAATCCTGATCTTTTTTTAAGCACAGGAGATGTTAAAGAAAATTCACCCTCCAAGGCCAGATTGGTACGAGGAATTCTATGCGTCGGTTCTGAACAACAGCATGAAAGAATATGAGTCTGAGGTCAGTTATTATTGGTCAAGGGCTTCTTTTTATGCTGAGAATTTCATCAAGTTTCCTTAGTACCTGTTACTTGCTTCCTGCATTTGCGAACTCTTTGTTATATGGTAAGGTTGCAGTTTACAAGTCTCAGCTCTTTGATAAGTTGAGGGGACAAGCCAAAGAAGTTCTGGAGATTGGCATAGGGACAGGTCCAAACCTTAAGTACTATGCCAGTGATGCGAGCATGGTTTTTGGCATTGATCCGAACAAAAAGATGGAGAAGTATGCCAGAGGAGCAGCTGATGCTGCTGGTCTTTCACCAGAAAATTTCAAATTCGTACAAGCAGTAAGTTTCTATACATGCAGATATATTTCACATGCAGTTAGATCTGTGCCTAATTTATTATATTTCCAATTTTGGACACTGAAAAAAAGGTGAGATCATGCTAGGACTCTTAGTGCTGCTTATTGGATTCTAAACACCATGAACTAGATGGAAATTTTGATAGGAGGCATTAAAATATATACTTCATGTTTCCTATTGTTTCTTGTAGAATTGGCAAAATTTCATTTGCTTGTGATCAGGTAACTTCATTGTTTGTAATATATATCATCGCTTCTTTTAGTTCAGGTAGGGGAAGCTTTGCCACTGGATGATGCTTCTGTTGATGCTGTCATTGGAACACTTGTATTATGTTCTGTTAAAGATGTTCATGAGACTCTTCAAGGTACCCATCTTTTGTTCCATAAACTTCCCATTAGTAATGGGTTTTAAGACTCTTCAAGATTCTTTGATGTAATAATATTACTTTAGAATTTCACGATAATATCATCGGAGCTGAATCCAATAGACAACTCCTACAATTGATGTACAAGGAATGATAACTAGTAATTGTATTGACTATCGAGTGTTTGCATACAAAAGTAAGTTGGTTAGATTTCTTAATCAATCAGATTTTGTGCAGAGTCCCTAGCGTGTAAGGCTCCTTTTGTTTTAACGGAAAATCATTGGTTTTTGTTTGGTTTGTTAAGTGGCTTGGTAAGGCTTCATCTGAACTAGTTATTTTTTCTAAGCAATTTCCTGATTTTATCAGTTGTATTAGCACAGTTATCGACCACCATTATTCAATTTAGAAAGACACCAAGAATCACAGCTAACATAATTCTGTTTTTTCTATTCCAACAGAGGTAAAGAGGGTGCTTAAACCAGGGGGGCTCTACTTGTTTGTGGAGCATGTGGCAGCAAAGGGTACTGAACTATATTTCTCCTGGTCTGTTTCAGTCAGAAGTTAAATGGATCGGGTTTGGGCCTGTCAATCCTTTTGCTCAAGTTTGTCAAGTCACCAAGTTTTAGAGGCTCTTCACTTAAAAAATTTCATGTTTGGGTCAAGTTGGGTTAGGTTCTCGGGCTATGTTCAATTTTATGTTACTTTTAACCGATTGGATCAATTTCCGGGTTTGAGTTCATTTTCAAAATAAAATTCATGGACTCGAGGTTTCATGTTAGATTTAGGCAAGTTGGGTATCTGGTTGGGTCAGTTTTTGACATGTTTAGTTGGAACATGTTTCGTGTTTGATTCATCACAAGCTCATTTGAATTTTCATTTTACAGATCAAACATCTCAGAGGCTTTTACAGAGAATTCTCGATCCGTTACAGCAGCTGCTAGCTGATGGTTGTCATCTGACAAGGGAAACAGGGAAATACATTTCTGAAGCAGGCTTTTCTAGTGTCGATAGCAACACGGGGTACATATCGAGTGCCCTGTTTATAAACCCGCATCTCTACGGGATCGCTCAGAAATGACTCTCCATGAAGTACATTTCTGAAGCAGGCTTTTCCTGATTTGATTATAAAGGTGTTTATAGACAAGCAAAGAGCAAAGATAAGTGGGTTGGTTGGTTGGTTGGATATCTTAATCAATCAGATTTGGTGCAGAGTTCCTAGCCTCTAAAATGTAATACTATCATGATGAATTTGTTAATTTCATAGGTTAATTTCTTTTTGTAGTCAGAAATGCAAATGATGTTCATCAGTCATCATTATCAGCAGATAAGGTCACTACAAGTCAACGATATAGAATGTTGCTAGTTGACACCAAGATGTATTCCATAAAACTTGTGCCTGGAAATTTTGTTTGAAACCTGGAAATGATGGTCAGGATAACTCACGAGGGTTTTACAGACATAATGGTAGGGACCATACGGTACAATCGGTACATCCGAGGCCGAGTTAGTTTGAATGGGTCAATTTTGGTTAGGATTCATTGATTCAAACCTCTGACTAGGGTGCTAATGAGAGAATTGAAAGCTACTAGAGGTCTGGAGCTTGGCTCAAGACATTCACGAGTTATGTTGAGCAAATTGTTATTTAC CTAGCATAAACCAGTAGCAGTGTAATTTATCGTCACTCTACAAAAACAGCAAAAATCAAGAAATGATCCACTCAACCTTGCTACCCACCTCAAATTTCACTAACCCTCTTCAATTTCCCACAAAAAAGACCAATCCCCAGTTCAAATCATCAGTTAGTAATACCAAAACCGATGTAGGGTACAATTTAATTCATACACAAACAAATCAGAATCCCCATAAACCCATAAATTTGCAGTCATTAGGATTCTGCAAATGTGGAAGACGACATTTTCTGGAGTCAATTGCGAGCACTGTGCTTCATACTTCACTCCCCTCTCTTGCGTCAGGGTTAGAGCCTGACTCGGCTTCCATGGAGATGTTAAAGAAAATTCACCCTCCAAGGCCAGATTGGTACGAGGAATTCTATGCGTCGGTTCTGAACAACAGCATGAAAGAATATGAGTCTGAGGTTGCAGTTTACAAGTCTCAGCTCTTTGATAAGTTGAGGGGACAAGCCAAAGAAGTTCTGGAGATTGGCATAGGGACAGGTCCAAACCTTAAGTACTATGCCAGTGATGCGAGCATGGTTTTTGGCATTGATCCGAACAAAAAGATGGAGAAGTATGCCAGAGGAGCAGCTGATGCTGCTGGTCTTTCACCAGAAAATTTCAAATTCGTACAAGCAGTAGGGGAAGCTTTGCCACTGGATGATGCTTCTGTTGATGCTGTCATTGGAACACTTGTATTATGTTCTGTTAAAGATGTTCATGAGACTCTTCAAGAGGTAAAGAGGGTGCTTAAACCAGGGGGGCTCTACTTGTTTGTGGAGCATGTGGCAGCAAAGGATCAAACATCTCAGAGGCTTTTACAGAGAATTCTCGATCCGTTACAGCAGCTGCTAGCTGATGGTTGTCATCTGACAAGGGAAACAGGGAAATACATTTCTGAAGCAGGCTTTTCTAGTGTCGATAGCAACACGGGGTACATATCGAGTGCCCTGTTTATAAACCCGCATCTCTACGGGATCGCTCAGAAATGACTCTCCATGAAGTACATTTCTGAAGCAGGCTTTTCCTGATTTGATTATAAAGGTGTTTATAGACAAGCAAAGAGCAAAGATAAGTGGGTTGGTTGGTTGGTTGGATATCTTAATCAATCAGATTTGGTGCAGAGTTCCTAGCCTCTAAAATGTAATACTATCATGATGAATTTGTTAATTTCATAGGTTAATTTCTTTTTGTAGTCAGAAATGCAAATGATGTTCATCAGTCATCATTATCAGCAGATAAGGTCACTACAAGTCAACGATATAGAATGTTGCTAGTTGACACCAAGATGTATTCCATAAAACTTGTGCCTGGAAATTTTGTTTGAAACCTGGAAATGATGGTCAGGATAACTCACGAGGGTTTTACAGACATAATGGTAGGGACCATACGGTACAATCGGTACATCCGAGGCCGAGTTAGTTTGAATGGGTCAATTTTGGTTAGGATTCATTGATTCAAACCTCTGACTAGGGTGCTAATGAGAGAATTGAAAGCTACTAGAGGTCTGGAGCTTGGCTCAAGACATTCACGAGTTATGTTGAGCAAATTGTTATTTAC ATGATCCACTCAACCTTGCTACCCACCTCAAATTTCACTAACCCTCTTCAATTTCCCACAAAAAAGACCAATCCCCAGTTCAAATCATCAGTTAGTAATACCAAAACCGATGTAGGGTACAATTTAATTCATACACAAACAAATCAGAATCCCCATAAACCCATAAATTTGCAGTCATTAGGATTCTGCAAATGTGGAAGACGACATTTTCTGGAGTCAATTGCGAGCACTGTGCTTCATACTTCACTCCCCTCTCTTGCGTCAGGGTTAGAGCCTGACTCGGCTTCCATGGAGATGTTAAAGAAAATTCACCCTCCAAGGCCAGATTGGTACGAGGAATTCTATGCGTCGGTTCTGAACAACAGCATGAAAGAATATGAGTCTGAGGTTGCAGTTTACAAGTCTCAGCTCTTTGATAAGTTGAGGGGACAAGCCAAAGAAGTTCTGGAGATTGGCATAGGGACAGGTCCAAACCTTAAGTACTATGCCAGTGATGCGAGCATGGTTTTTGGCATTGATCCGAACAAAAAGATGGAGAAGTATGCCAGAGGAGCAGCTGATGCTGCTGGTCTTTCACCAGAAAATTTCAAATTCGTACAAGCAGTAGGGGAAGCTTTGCCACTGGATGATGCTTCTGTTGATGCTGTCATTGGAACACTTGTATTATGTTCTGTTAAAGATGTTCATGAGACTCTTCAAGAGGTAAAGAGGGTGCTTAAACCAGGGGGGCTCTACTTGTTTGTGGAGCATGTGGCAGCAAAGGATCAAACATCTCAGAGGCTTTTACAGAGAATTCTCGATCCGTTACAGCAGCTGCTAGCTGATGGTTGTCATCTGACAAGGGAAACAGGGAAATACATTTCTGAAGCAGGCTTTTCTAGTGTCGATAGCAACACGGGGTACATATCGAGTGCCCTGTTTATAAACCCGCATCTCTACGGGATCGCTCAGAAATGA MIHSTLLPTSNFTNPLQFPTKKTNPQFKSSVSNTKTDVGYNLIHTQTNQNPHKPINLQSLGFCKCGRRHFLESIASTVLHTSLPSLASGLEPDSASMEMLKKIHPPRPDWYEEFYASVLNNSMKEYESEVAVYKSQLFDKLRGQAKEVLEIGIGTGPNLKYYASDASMVFGIDPNKKMEKYARGAADAAGLSPENFKFVQAVGEALPLDDASVDAVIGTLVLCSVKDVHETLQEVKRVLKPGGLYLFVEHVAAKDQTSQRLLQRILDPLQQLLADGCHLTRETGKYISEAGFSSVDSNTGYISSALFINPHLYGIAQK Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
Homology
BLAST of Spo10794.1 vs. NCBI nr
Match: gi|902230137|gb|KNA21731.1| (hypothetical protein SOVF_040760 isoform A [Spinacia oleracea]) HSP 1 Score: 636.0 bits (1639), Expect = 3.600e-179 Identity = 318/318 (100.00%), Postives = 318/318 (100.00%), Query Frame = 1
BLAST of Spo10794.1 vs. NCBI nr
Match: gi|731343941|ref|XP_010683147.1| (PREDICTED: methyltransferase-like protein 7A isoform X1 [Beta vulgaris subsp. vulgaris]) HSP 1 Score: 456.1 bits (1172), Expect = 5.200e-125 Identity = 239/328 (72.87%), Postives = 276/328 (84.15%), Query Frame = 1
BLAST of Spo10794.1 vs. NCBI nr
Match: gi|902230138|gb|KNA21732.1| (hypothetical protein SOVF_040760 isoform B [Spinacia oleracea]) HSP 1 Score: 439.5 bits (1129), Expect = 5.000e-120 Identity = 220/220 (100.00%), Postives = 220/220 (100.00%), Query Frame = 1
BLAST of Spo10794.1 vs. NCBI nr
Match: gi|870855295|gb|KMT07028.1| (hypothetical protein BVRB_6g153590 [Beta vulgaris subsp. vulgaris]) HSP 1 Score: 376.3 bits (965), Expect = 5.200e-101 Identity = 181/220 (82.27%), Postives = 206/220 (93.64%), Query Frame = 1
BLAST of Spo10794.1 vs. NCBI nr
Match: gi|731343943|ref|XP_010683148.1| (PREDICTED: methyltransferase-like protein 7B isoform X2 [Beta vulgaris subsp. vulgaris]) HSP 1 Score: 355.1 bits (910), Expect = 1.200e-94 Identity = 190/265 (71.70%), Postives = 217/265 (81.89%), Query Frame = 1
BLAST of Spo10794.1 vs. UniProtKB/TrEMBL
Match: A0A0K9RQC4_SPIOL (Uncharacterized protein OS=Spinacia oleracea GN=SOVF_040760 PE=4 SV=1) HSP 1 Score: 636.0 bits (1639), Expect = 2.500e-179 Identity = 318/318 (100.00%), Postives = 318/318 (100.00%), Query Frame = 1
BLAST of Spo10794.1 vs. UniProtKB/TrEMBL
Match: A0A0K9RSF5_SPIOL (Uncharacterized protein OS=Spinacia oleracea GN=SOVF_040760 PE=4 SV=1) HSP 1 Score: 439.5 bits (1129), Expect = 3.500e-120 Identity = 220/220 (100.00%), Postives = 220/220 (100.00%), Query Frame = 1
BLAST of Spo10794.1 vs. UniProtKB/TrEMBL
Match: A0A0J8C4T9_BETVU (Uncharacterized protein OS=Beta vulgaris subsp. vulgaris GN=BVRB_6g153590 PE=4 SV=1) HSP 1 Score: 376.3 bits (965), Expect = 3.600e-101 Identity = 181/220 (82.27%), Postives = 206/220 (93.64%), Query Frame = 1
BLAST of Spo10794.1 vs. UniProtKB/TrEMBL
Match: B9HI85_POPTR (Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0008s08800g PE=4 SV=2) HSP 1 Score: 346.3 bits (887), Expect = 4.000e-92 Identity = 185/312 (59.29%), Postives = 234/312 (75.00%), Query Frame = 1
BLAST of Spo10794.1 vs. UniProtKB/TrEMBL
Match: V4TK02_9ROSI (Uncharacterized protein OS=Citrus clementina GN=CICLE_v10032245mg PE=4 SV=1) HSP 1 Score: 345.5 bits (885), Expect = 6.800e-92 Identity = 172/258 (66.67%), Postives = 207/258 (80.23%), Query Frame = 1
BLAST of Spo10794.1 vs. ExPASy Swiss-Prot
Match: MET7A_HUMAN (Methyltransferase-like protein 7A OS=Homo sapiens GN=METTL7A PE=1 SV=1) HSP 1 Score: 128.6 bits (322), Expect = 1.200e-28 Identity = 84/203 (41.38%), Postives = 115/203 (56.65%), Query Frame = 1
BLAST of Spo10794.1 vs. ExPASy Swiss-Prot
Match: MET7B_RAT (Methyltransferase-like protein 7B OS=Rattus norvegicus GN=Mettl7b PE=1 SV=1) HSP 1 Score: 126.7 bits (317), Expect = 4.500e-28 Identity = 86/214 (40.19%), Postives = 121/214 (56.54%), Query Frame = 1
BLAST of Spo10794.1 vs. ExPASy Swiss-Prot
Match: MET7B_MOUSE (Methyltransferase-like protein 7B OS=Mus musculus GN=Mettl7b PE=1 SV=2) HSP 1 Score: 124.8 bits (312), Expect = 1.700e-27 Identity = 86/214 (40.19%), Postives = 119/214 (55.61%), Query Frame = 1
BLAST of Spo10794.1 vs. ExPASy Swiss-Prot
Match: MET7B_HUMAN (Methyltransferase-like protein 7B OS=Homo sapiens GN=METTL7B PE=1 SV=2) HSP 1 Score: 107.1 bits (266), Expect = 3.700e-22 Identity = 79/230 (34.35%), Postives = 119/230 (51.74%), Query Frame = 1
BLAST of Spo10794.1 vs. ExPASy Swiss-Prot
Match: YCGJ_BACSU (Uncharacterized methyltransferase YcgJ OS=Bacillus subtilis (strain 168) GN=ycgJ PE=1 SV=2) HSP 1 Score: 65.5 bits (158), Expect = 1.200e-9 Identity = 41/124 (33.06%), Postives = 58/124 (46.77%), Query Frame = 1
BLAST of Spo10794.1 vs. TAIR (Arabidopsis)
Match: AT1G69523.1 (S-adenosyl-L-methionine-dependent methyltransferases superfamily protein) HSP 1 Score: 293.1 bits (749), Expect = 2.000e-79 Identity = 148/273 (54.21%), Postives = 195/273 (71.43%), Query Frame = 1
BLAST of Spo10794.1 vs. TAIR (Arabidopsis)
Match: AT1G69526.2 (S-adenosyl-L-methionine-dependent methyltransferases superfamily protein) HSP 1 Score: 285.0 bits (728), Expect = 5.600e-77 Identity = 143/279 (51.25%), Postives = 194/279 (69.53%), Query Frame = 1
BLAST of Spo10794.1 vs. TAIR (Arabidopsis)
Match: AT1G69520.1 (S-adenosyl-L-methionine-dependent methyltransferases superfamily protein) HSP 1 Score: 218.8 bits (556), Expect = 4.900e-57 Identity = 115/206 (55.83%), Postives = 151/206 (73.30%), Query Frame = 1
The following BLAST results are available for this feature:
BLAST of Spo10794.1 vs. NCBI nr
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. NCBI nr) Total hits: 5
BLAST of Spo10794.1 vs. UniProtKB/TrEMBL
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. UniprotKB/TrEMBL) Total hits: 5
BLAST of Spo10794.1 vs. ExPASy Swiss-Prot
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. ExPASy SwissProt) Total hits: 5
BLAST of Spo10794.1 vs. TAIR (Arabidopsis)
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. TAIR) Total hits: 3
InterPro
Analysis Name: InterPro Annotations of S. oleracea
Date Performed: 2018-06-29
GO Annotation
GO Assignments
This mRNA is annotated with the following GO terms.
|