Overview
| Name | Spo05813.1 |
|---|
| Type | mRNA |
|---|
| Organism | Spinacia oleracea (Spinach) |
|---|
| Description | Unknown protein |
|---|
| Location | chr1 : 50201447 .. 50203176 (-) |
|---|
| Sequence length | 267 |
|---|
Sequences
The following sequences are available for this feature:
Gene sequence (with intron) Legend: polypeptideCDSexon Hold the cursor over a type above to highlight its positions in the sequence below. ATGATTTGGTTTGTACATGTTGTGAGTATCTCTGGAGACCTTTTTTTTTCTGTTTAGTTTCTGCAAATTTTCATGTGATTAGCCTATTTTTCTGGAATGTGCAAATTATTACATGTTCAATTCAGTTCATTTTTCTGGTGTAACATTAGCCTATTTTATCGGGGGTACATACATTATCAAAATGGAGCTTGATCTCCTTGAGCTAACAAGATAGTGTGTGTAATTTTTTGAACTACTTTCTATGATACCATGATTGTGTCACTACTTAGTACTTACTTGTAGTGAGAAGGGGAAGTTGTGGCCATCTTTCTCGATTATATTATGGTTTTCGAACTATATGAGATTATGTGAACTGCCTTTTCTGATTGGTGATTGTTATAGACTGTCGAAATGTAGATTGATCGATCTCCTTGAGCTAATATGCAAGTGGGTGAGTTGAGCTCCATTTTCAGTGGCTAATGAGCTTGTATATGGTAGTCTAGCTCCGAAAATTCTAATTAAACACATATTTTGATGAGCTTGTACTGGTCACTTTCCCTAATCACTTGGCTCTTTAGTCCTCCCAGCATAGAATACAATCTTTGAAATGCAAGCGAAATCTATAGGGCTATACAGAGTTAATATTACGCAGTATACTGCTGAATAATTCAATGTGATCAAGGTTCTAAGTACGTAGTACATTGTGATCAAGGTTCTAAGTATGTGTTCTGAGTAATTCAATGTCAGAGATTAGCAAAAGTCGATCATACATCTTCAAGTCTCTTGACATGGTACTTCCCAGTTCCCATGTCCACATTTGAACTAAGCATCTGTGGTGCTTTCTTCTGATTGTTGATGTGCCAAATATTTTTTCGGTCGTGGCTTTGAGTTTTAGGTTTAGAGGTGAAGTTGTTGTCAGTAAATCTACCTCATCAAGTTAAATCATTATGCATGCTAATTTTGGTTAGCAAAGTAAGTGTGAAGGCACTAACATTTTGCTTCTCTGGTGAGTAATGTTGAAAGTCCAAGTGTGCTGATTCGCATGGTTCATACATTCTTACATATGTTTGTTTTTCTGGATGGCCAGTCCCATTACATATATTGATTAATGCTTATATAAGTACACATGCGAAGTCTTGTTTGTTGAATTACAGAGAAACGTACTGTCAAACAGAAAACAATACAGAACCTGAGATAGATCATGTGTCAAAGTCTATCCATCCTATATTCCCATGTACTACATATATAATGGCTTTATAAGCTGTATAATACTTTTCTTCAGTGCTTGTGACTTGTGGGCATAAATTCCGAGTTAATTGAAGTTTTATGTGATGTGGTTTTGATGTCATTTGTACGTGAGGTATTTTAGCGTTCATAATTTACTCGGGCATAAAACAGATGATAGTGATATTTTAATCTTTTTTTCCTTTTATGTTTAAATGCTCGTTATTAAGATACTTTTGTTTGTGATAACCATCTAAATGAGTTGTTTCTGTTTTTACCAGATAGTGGGAGGAAGGAGGTGGTTGCTCAAATGCCATGCATATCTTAGCATGTATTATTGGCTCCAAATCTTGAATTCGCCGGGGACCTCATGGGTTCCATGTCAAAGTGACCCCATCAATTGGTGTTTTCAATTTTTCATTGAGAAGGGGAGAAATGCTCAATGGCCCGTTTACAGCTGGTACAGAATAATAAAATTGACGCGGAGTGGCTTTCAGCAGTTTTTGTTGATTTGGAATTTTGAATAA mRNA sequence ATGATTTGGTTTGTACATGTTATAGTGGGAGGAAGGAGGTGGTTGCTCAAATGCCATGCATATCTTAGCATGTATTATTGGCTCCAAATCTTGAATTCGCCGGGGACCTCATGGGTTCCATGTCAAAGTGACCCCATCAATTGGTGTTTTCAATTTTTCATTGAGAAGGGGAGAAATGCTCAATGGCCCGTTTACAGCTGGTACAGAATAATAAAATTGACGCGGAGTGGCTTTCAGCAGTTTTTGTTGATTTGGAATTTTGAATAA Coding sequence (CDS) ATGATTTGGTTTGTACATGTTATAGTGGGAGGAAGGAGGTGGTTGCTCAAATGCCATGCATATCTTAGCATGTATTATTGGCTCCAAATCTTGAATTCGCCGGGGACCTCATGGGTTCCATGTCAAAGTGACCCCATCAATTGGTGTTTTCAATTTTTCATTGAGAAGGGGAGAAATGCTCAATGGCCCGTTTACAGCTGGTACAGAATAATAAAATTGACGCGGAGTGGCTTTCAGCAGTTTTTGTTGATTTGGAATTTTGAATAA Protein sequence MIWFVHVIVGGRRWLLKCHAYLSMYYWLQILNSPGTSWVPCQSDPINWCFQFFIEKGRNAQWPVYSWYRIIKLTRSGFQQFLLIWNFE
Relationships
This mRNA is a part of the following gene feature(s):
| Feature Name | Unique Name | Type |
|---|
| Spo05813 | Spo05813 | gene |
The following polypeptide feature(s) derives from this mRNA:
| Feature Name | Unique Name | Type |
|---|
| Spo05813.1 | Spo05813.1-protein | polypeptide |
The following CDS feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Type |
|---|
| Spo05813.1.CDS.2 | Spo05813.1.CDS.2 | CDS |
| Spo05813.1.CDS.1 | Spo05813.1.CDS.1 | CDS |
The following exon feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Type |
|---|
| Spo05813.1.exon.2 | Spo05813.1.exon.2 | exon |
| Spo05813.1.exon.1 | Spo05813.1.exon.1 | exon |
Homology
The following BLAST results are available for this feature:
BLAST of Spo05813.1 vs. NCBI nr
Analysis Date: 2018-06-29 ( blastp Spinacia oleracea peptides vs. NCBI nr)
Total hits: 0
| Match Name | E-value | Identity | Description | |
|---|
back to top
BLAST of Spo05813.1 vs. UniProtKB/TrEMBL
Analysis Date: 2018-06-29 ( blastp Spinacia oleracea peptides vs. UniprotKB/TrEMBL)
Total hits: 0
| Match Name | E-value | Identity | Description | |
|---|
back to top
BLAST of Spo05813.1 vs. ExPASy Swiss-Prot
Analysis Date: 2018-06-29 ( blastp Spinacia oleracea peptides vs. ExPASy SwissProt)
Total hits: 0
| Match Name | E-value | Identity | Description | |
|---|
back to top
BLAST of Spo05813.1 vs. TAIR (Arabidopsis)
Analysis Date: 2018-06-29 ( blastp Spinacia oleracea peptides vs. TAIR)
Total hits: 0
| Match Name | E-value | Identity | Description | |
|---|
back to top
|
