Spo05161.1 (mRNA) | SpinachBase

Overview


Name	Spo05161.1
Type	mRNA
Organism	Spinacia oleracea (Spinach)
Description	Translationally-controlled tumor protein
Location	SpoScf_01349 : 118747 .. 120928 (-)
Sequence length	1751

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDSexonthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGTGCTCCTGTACTTTGCAGTGGATTGTCAAAGGGGGTGTTGACATCGACATTGGTGCCAATCCTTCTGCTGAAGATGGTGGAGAAGATGAAGGTGTCGATGACCAAGCTCAAAAGGTTGTTGACATTGTTGACGTCTTCAGGCTCCAGGTAATTGTTGGCTAGATTCAAGTTTACGCAAGAAAGTCCTTGGCTATTAAATCGTGGAATTGACATTTTTCTTTTCAGGAGCAACCTTCCTATGACAAGAAGCAGTTTGTTGCATGGGTTAAGAGATACATCAAGAACCTGACTGCCAAATTGGAAGGTGAACAAGCTGCCGAGTTCAAGAAGAATGTTGAGGCAGCAACCAAATATCTTATGTCTAAGCTCAGCGACCTTCAATTGTATGTTTTTGATATTCATATTCTATCTAACATATCTTTGTTCTTTATCAACCCATAACTGATAGAATTAAGGTTGCATGCATCAAATACCAACCTACCTTGCTAGAGTTTTAAAAGGCATTGGGGTAATTGAACTTTGTGTGACATTTTAAATCAGCCTATTCATCTTTGGAACTAGTTTGTTTGGTCTTTGTTGGCTTTTTTTGGGTTGGACATGGGGTTGGGTACTTCTAAAATCATGCTGCTGAGTAATTTGCTAATTTCAATGCAAGTGTCATCTGTCGACTTTGAAAACCTGCATTATTAGTTAATTTCCATGGAATTCTGCTAATGCAAATTCTCTGTCTGTGCAGTTTTGTGGGTGAGAGCATGCAAGATGAATGTGCCACAGTGTTTGCTTACTACAAGGAGGGTGCTGCTGACCCAACTTTCTTGTACTTCTCCCATGGTCTGAAGGAAGTCAAGTGCTAAGTGAAAGGAGTTGTGTGTGATCCATCTCTCAAGAGGGGTTCGCCTTAATTCTTAATTCTGATATTTATAGGTTAAGATGTTTTAAGTTTCAGTTTTGCAGTATTTTTGTTAACTCTTGTTGTCAGACTTCTTGTATGTTTTGAGAAAGTGGGATGGTGAAATCAGTTGGTTTAGCCTTCCCTTGTGTGTCACTGTTTTGTTCAATTGAGAATTCTGGATATATTAATATATTTACTCCCCATTTGAGAATAAGCAATCCTTGATCCGCATCCTTTGATGAGTACTCGGTTATGCCGCTATAGGCTGGGGTGTATGTATATCAGTACCACTGGACACGCACAGATGGAGATCCTTGGACAGGCTGTTAGAATTTGCTAATCAACGGATGCTTCCATGCCGGAGTCTGTGATAGTTATAAACTCAAGTCCTTAATATGAGTGATGGTGCCGAGAAGAAATTTGTTTACAGCTCAATTTGAAATGAGATTAGGTATGTAAATTGGATGTGTAGGTTATGTTGATATAATGGTGTGTGTTATTGTGATGGTTGATGGTGTTGATGGTTGGAGAGGGATGCCATTTGCAAGTTACTGATGTCAATGAAGAGATGGTTCAATTTTCTAGGTAGTTCATGACAGTAGACTGGAGAGTACGGAGTATTTAAGAACAACTTAGAGAGAGTAGGGGATATCTCGAGGAAGTATGTCAAAAATTGCTTGATTTGGTACTGGTCTGGGGACAGTTTAGCTTTTTACGCTTGGAACGAATCAAACAAGATCCTACGCGACTATAATTTTTTATTACAAATGATAGTCAAATTGAAATTTGTGAAAAGTATTAAAATTCAAATTATCCATATTATTTCGAAACAGAGGGAGTAGTATTAATACGATCAATTTTGTTTCGGATTTTTCATGAAATGCCCCTGAGGTTTGCCTTAATGCACAAAATACCCCTAAACTTTCCAGAATGCACCAAATACCCCCGAGGTTTAGTATAAATACACAAAATGCCCAAAAGGCTAACGAACGTTAAGTCCCCGTTAGCGTATGTTTACCTTTTTGCCCTTAATAAATCGTTTTATCTATTTATCCTAACATTAACCCTTAATTACATAAATTAACCCTTACTTACATTAATAAACCTTAATTAAATTAATTAAACTCTTAACAAATTAATTAACTATTATCTAAAAAAATCAAAAATCAAAATCAATTACCCCCAATTTTTTTTGGATTCTCCATTGCTGCTCTTCTCTCGATTTTCTCTGTCTTCACCACCTTCTTTCTCTCCAATCCCTTCTTCAAACCCATCACTCAAAATCCA

mRNA sequence

ATGTGCTCCTGTACTTTGCAGTGGATTGTCAAAGGGGGTGTTGACATCGACATTGGTGCCAATCCTTCTGCTGAAGATGGTGGAGAAGATGAAGGTGTCGATGACCAAGCTCAAAAGGTTGTTGACATTGTTGACGTCTTCAGGCTCCAGGAGCAACCTTCCTATGACAAGAAGCAGTTTGTTGCATGGGTTAAGAGATACATCAAGAACCTGACTGCCAAATTGGAAGGTGAACAAGCTGCCGAGTTCAAGAAGAATGTTGAGGCAGCAACCAAATATCTTATGTCTAAGCTCAGCGACCTTCAATTTTTTGTGGGTGAGAGCATGCAAGATGAATGTGCCACAGTGTTTGCTTACTACAAGGAGGGTGCTGCTGACCCAACTTTCTTGTACTTCTCCCATGGTCTGAAGGAAGTCAAGTGCTAAGTGAAAGGAGTTGTGTGTGATCCATCTCTCAAGAGGGGTTCGCCTTAATTCTTAATTCTGATATTTATAGGTTAAGATGTTTTAAGTTTCAGTTTTGCAGTATTTTTGTTAACTCTTGTTGTCAGACTTCTTGTATGTTTTGAGAAAGTGGGATGGTGAAATCAGTTGGTTTAGCCTTCCCTTGTGTGTCACTGTTTTGTTCAATTGAGAATTCTGGATATATTAATATATTTACTCCCCATTTGAGAATAAGCAATCCTTGATCCGCATCCTTTGATGAGTACTCGGTTATGCCGCTATAGGCTGGGGTGTATGTATATCAGTACCACTGGACACGCACAGATGGAGATCCTTGGACAGGCTGTTAGAATTTGCTAATCAACGGATGCTTCCATGCCGGAGTCTGTGATAGTTATAAACTCAAGTCCTTAATATGAGTGATGGTGCCGAGAAGAAATTTGTTTACAGCTCAATTTGAAATGAGATTAGGTATGTAAATTGGATGTGTAGGTTATGTTGATATAATGGTGTGTGTTATTGTGATGGTTGATGGTGTTGATGGTTGGAGAGGGATGCCATTTGCAAGTTACTGATGTCAATGAAGAGATGGTTCAATTTTCTAGGTAGTTCATGACAGTAGACTGGAGAGTACGGAGTATTTAAGAACAACTTAGAGAGAGTAGGGGATATCTCGAGGAAGTATGTCAAAAATTGCTTGATTTGGTACTGGTCTGGGGACAGTTTAGCTTTTTACGCTTGGAACGAATCAAACAAGATCCTACGCGACTATAATTTTTTATTACAAATGATAGTCAAATTGAAATTTGTGAAAAGTATTAAAATTCAAATTATCCATATTATTTCGAAACAGAGGGAGTAGTATTAATACGATCAATTTTGTTTCGGATTTTTCATGAAATGCCCCTGAGGTTTGCCTTAATGCACAAAATACCCCTAAACTTTCCAGAATGCACCAAATACCCCCGAGGTTTAGTATAAATACACAAAATGCCCAAAAGGCTAACGAACGTTAAGTCCCCGTTAGCGTATGTTTACCTTTTTGCCCTTAATAAATCGTTTTATCTATTTATCCTAACATTAACCCTTAATTACATAAATTAACCCTTACTTACATTAATAAACCTTAATTAAATTAATTAAACTCTTAACAAATTAATTAACTATTATCTAAAAAAATCAAAAATCAAAATCAATTACCCCCAATTTTTTTTGGATTCTCCATTGCTGCTCTTCTCTCGATTTTCTCTGTCTTCACCACCTTCTTTCTCTCCAATCCCTTCTTCAAACCCATCACTCAAAATCCA

Coding sequence (CDS)

ATGTGCTCCTGTACTTTGCAGTGGATTGTCAAAGGGGGTGTTGACATCGACATTGGTGCCAATCCTTCTGCTGAAGATGGTGGAGAAGATGAAGGTGTCGATGACCAAGCTCAAAAGGTTGTTGACATTGTTGACGTCTTCAGGCTCCAGGAGCAACCTTCCTATGACAAGAAGCAGTTTGTTGCATGGGTTAAGAGATACATCAAGAACCTGACTGCCAAATTGGAAGGTGAACAAGCTGCCGAGTTCAAGAAGAATGTTGAGGCAGCAACCAAATATCTTATGTCTAAGCTCAGCGACCTTCAATTTTTTGTGGGTGAGAGCATGCAAGATGAATGTGCCACAGTGTTTGCTTACTACAAGGAGGGTGCTGCTGACCCAACTTTCTTGTACTTCTCCCATGGTCTGAAGGAAGTCAAGTGCTAA

Protein sequence

MCSCTLQWIVKGGVDIDIGANPSAEDGGEDEGVDDQAQKVVDIVDVFRLQEQPSYDKKQFVAWVKRYIKNLTAKLEGEQAAEFKKNVEAATKYLMSKLSDLQFFVGESMQDECATVFAYYKEGAADPTFLYFSHGLKEVKC

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
Spo05161	Spo05161	gene

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
Spo05161.1	Spo05161.1-protein	polypeptide

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Spo05161.1.CDS.3	Spo05161.1.CDS.3	CDS
Spo05161.1.CDS.2	Spo05161.1.CDS.2	CDS
Spo05161.1.CDS.1	Spo05161.1.CDS.1	CDS

The following three_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Spo05161.1.utr3p.1	Spo05161.1.utr3p.1	three_prime_UTR

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Spo05161.1.exon.3	Spo05161.1.exon.3	exon
Spo05161.1.exon.2	Spo05161.1.exon.2	exon
Spo05161.1.exon.1	Spo05161.1.exon.1	exon

Homology

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BLAST of Spo05161.1 vs. NCBI nr
Match: gi|902211367|gb|KNA16696.1| (hypothetical protein SOVF_086760 [Spinacia oleracea])

HSP 1 Score: 270.8 bits (691), Expect = 1.400e-69
Identity = 134/135 (99.26%), Postives = 135/135 (100.00%), Query Frame = 1


		  
Query: 7   QWIVKGGVDIDIGANPSAEDGGEDEGVDDQAQKVVDIVDVFRLQEQPSYDKKQFVAWVKR 66
           +WIVKGGVDIDIGANPSAEDGGEDEGVDDQAQKVVDIVDVFRLQEQPSYDKKQFVAWVKR
Sbjct: 34  KWIVKGGVDIDIGANPSAEDGGEDEGVDDQAQKVVDIVDVFRLQEQPSYDKKQFVAWVKR 93

Query: 67  YIKNLTAKLEGEQAAEFKKNVEAATKYLMSKLSDLQFFVGESMQDECATVFAYYKEGAAD 126
           YIKNLTAKLEGEQAAEFKKNVEAATKYLMSKLSDLQFFVGESMQDECATVFAYYKEGAAD
Sbjct: 94  YIKNLTAKLEGEQAAEFKKNVEAATKYLMSKLSDLQFFVGESMQDECATVFAYYKEGAAD 153

Query: 127 PTFLYFSHGLKEVKC 142
           PTFLYFSHGLKEVKC
Sbjct: 154 PTFLYFSHGLKEVKC 168

[Close]

BLAST of Spo05161.1 vs. NCBI nr
Match: gi|20140865|sp|Q9M5G3.2|TCTP_HORVU (RecName: Full=Translationally-controlled tumor protein homolog; Short=TCTP; AltName: Full=HTP)

HSP 1 Score: 227.3 bits (578), Expect = 1.700e-56
Identity = 108/134 (80.60%), Postives = 123/134 (91.79%), Query Frame = 1


		  
Query: 8   WIVKGGVDIDIGANPSAEDGGEDEGVDDQAQKVVDIVDVFRLQEQPSYDKKQFVAWVKRY 67
           W+V+G VD+DIGANPSAE GGEDEGVDDQA KVVDIVD FRLQEQP++DKKQF+A++KRY
Sbjct: 35  WVVQGAVDVDIGANPSAEGGGEDEGVDDQAVKVVDIVDTFRLQEQPAFDKKQFIAYIKRY 94

Query: 68  IKNLTAKLEGEQAAEFKKNVEAATKYLMSKLSDLQFFVGESMQDECATVFAYYKEGAADP 127
           IKNLTAKLEGE+   FKKNVE+ATKYL+SKL DLQFFVGESM D+ + VFAYY+EGAADP
Sbjct: 95  IKNLTAKLEGEELDAFKKNVESATKYLLSKLKDLQFFVGESMHDDGSVVFAYYREGAADP 154

Query: 128 TFLYFSHGLKEVKC 142
           TFLYF+HGLKEVKC
Sbjct: 155 TFLYFAHGLKEVKC 168

[Close]

BLAST of Spo05161.1 vs. NCBI nr
Match: gi|694322277|ref|XP_009352274.1| (PREDICTED: translationally-controlled tumor protein homolog [Pyrus x bretschneideri])

HSP 1 Score: 221.9 bits (564), Expect = 7.300e-55
Identity = 107/135 (79.26%), Postives = 117/135 (86.67%), Query Frame = 1


		  
Query: 7   QWIVKGGVDIDIGANPSAEDGGEDEGVDDQAQKVVDIVDVFRLQEQPSYDKKQFVAWVKR 66
           +W+V+G VD+DIGANPSAE GGEDEGVDDQA KVVDIVD FRLQEQP YDKKQFV WVKR
Sbjct: 34  KWVVQGAVDVDIGANPSAEGGGEDEGVDDQAVKVVDIVDTFRLQEQPPYDKKQFVTWVKR 93

Query: 67  YIKNLTAKLEGEQAAEFKKNVEAATKYLMSKLSDLQFFVGESMQDECATVFAYYKEGAAD 126
           YIK LT KLEGE    FKKN+EAATK+L+ KLSDLQFFVGESM D+   VFAYYKEGA D
Sbjct: 94  YIKLLTPKLEGESQEVFKKNIEAATKFLIGKLSDLQFFVGESMHDDGGLVFAYYKEGATD 153

Query: 127 PTFLYFSHGLKEVKC 142
           PTF+YF+HGLKEVKC
Sbjct: 154 PTFIYFAHGLKEVKC 168

[Close]

BLAST of Spo05161.1 vs. NCBI nr
Match: gi|657996563|ref|XP_008390652.1| (PREDICTED: translationally-controlled tumor protein homolog [Malus domestica])

HSP 1 Score: 221.5 bits (563), Expect = 9.500e-55
Identity = 107/135 (79.26%), Postives = 116/135 (85.93%), Query Frame = 1


		  
Query: 7   QWIVKGGVDIDIGANPSAEDGGEDEGVDDQAQKVVDIVDVFRLQEQPSYDKKQFVAWVKR 66
           +W+V+G VD+DIGANPSAE GGEDEGVDDQA KVVDIVD FRLQEQP YDKKQFV WVKR
Sbjct: 34  KWVVQGAVDVDIGANPSAEGGGEDEGVDDQAVKVVDIVDTFRLQEQPPYDKKQFVTWVKR 93

Query: 67  YIKNLTAKLEGEQAAEFKKNVEAATKYLMSKLSDLQFFVGESMQDECATVFAYYKEGAAD 126
           YIK LT KLEGE    FKKN+EAATK+L+ KLSDLQFFVGESM D+   VFAYYKEGA D
Sbjct: 94  YIKLLTPKLEGEXQEVFKKNIEAATKFLLGKLSDLQFFVGESMHDDGGLVFAYYKEGATD 153

Query: 127 PTFLYFSHGLKEVKC 142
           PTF+YF HGLKEVKC
Sbjct: 154 PTFIYFGHGLKEVKC 168

[Close]

BLAST of Spo05161.1 vs. NCBI nr
Match: gi|645233137|ref|XP_008223198.1| (PREDICTED: translationally-controlled tumor protein homolog [Prunus mume])

HSP 1 Score: 221.1 bits (562), Expect = 1.200e-54
Identity = 105/135 (77.78%), Postives = 118/135 (87.41%), Query Frame = 1


		  
Query: 7   QWIVKGGVDIDIGANPSAEDGGEDEGVDDQAQKVVDIVDVFRLQEQPSYDKKQFVAWVKR 66
           +W+V+G VD+DIGANPSAE GGEDEGVDDQ  KVVDIVD FRLQEQP +DKKQFV WVKR
Sbjct: 34  KWVVQGAVDVDIGANPSAEGGGEDEGVDDQTVKVVDIVDTFRLQEQPPFDKKQFVTWVKR 93

Query: 67  YIKNLTAKLEGEQAAEFKKNVEAATKYLMSKLSDLQFFVGESMQDECATVFAYYKEGAAD 126
           YIK LT KLEGE+  EFKKN+E ATK+L+SKLSDLQFFVGESM D+   VFAYYKEGA D
Sbjct: 94  YIKLLTPKLEGEKQEEFKKNIEGATKFLLSKLSDLQFFVGESMHDDGGLVFAYYKEGATD 153

Query: 127 PTFLYFSHGLKEVKC 142
           PTF+YF+HGL+EVKC
Sbjct: 154 PTFIYFAHGLREVKC 168

[Close]

BLAST of Spo05161.1 vs. UniProtKB/TrEMBL
Match: A0A0K9RB24_SPIOL (Uncharacterized protein OS=Spinacia oleracea GN=SOVF_086760 PE=3 SV=1)

HSP 1 Score: 270.8 bits (691), Expect = 9.500e-70
Identity = 134/135 (99.26%), Postives = 135/135 (100.00%), Query Frame = 1


		  
Query: 7   QWIVKGGVDIDIGANPSAEDGGEDEGVDDQAQKVVDIVDVFRLQEQPSYDKKQFVAWVKR 66
           +WIVKGGVDIDIGANPSAEDGGEDEGVDDQAQKVVDIVDVFRLQEQPSYDKKQFVAWVKR
Sbjct: 34  KWIVKGGVDIDIGANPSAEDGGEDEGVDDQAQKVVDIVDVFRLQEQPSYDKKQFVAWVKR 93

Query: 67  YIKNLTAKLEGEQAAEFKKNVEAATKYLMSKLSDLQFFVGESMQDECATVFAYYKEGAAD 126
           YIKNLTAKLEGEQAAEFKKNVEAATKYLMSKLSDLQFFVGESMQDECATVFAYYKEGAAD
Sbjct: 94  YIKNLTAKLEGEQAAEFKKNVEAATKYLMSKLSDLQFFVGESMQDECATVFAYYKEGAAD 153

Query: 127 PTFLYFSHGLKEVKC 142
           PTFLYFSHGLKEVKC
Sbjct: 154 PTFLYFSHGLKEVKC 168

[Close]

BLAST of Spo05161.1 vs. UniProtKB/TrEMBL
Match: F2DWT1_HORVD (Predicted protein OS=Hordeum vulgare var. distichum PE=2 SV=1)

HSP 1 Score: 227.3 bits (578), Expect = 1.200e-56
Identity = 108/134 (80.60%), Postives = 123/134 (91.79%), Query Frame = 1


		  
Query: 8   WIVKGGVDIDIGANPSAEDGGEDEGVDDQAQKVVDIVDVFRLQEQPSYDKKQFVAWVKRY 67
           W+V+G VD+DIGANPSAE GGEDEGVDDQA KVVDIVD FRLQEQP++DKKQF+A++KRY
Sbjct: 35  WVVQGAVDVDIGANPSAEGGGEDEGVDDQAVKVVDIVDTFRLQEQPAFDKKQFIAYIKRY 94

Query: 68  IKNLTAKLEGEQAAEFKKNVEAATKYLMSKLSDLQFFVGESMQDECATVFAYYKEGAADP 127
           IKNLTAKLEGE+   FKKNVE+ATKYL+SKL DLQFFVGESM D+ + VFAYY+EGAADP
Sbjct: 95  IKNLTAKLEGEELDAFKKNVESATKYLLSKLKDLQFFVGESMHDDGSVVFAYYREGAADP 154

Query: 128 TFLYFSHGLKEVKC 142
           TFLYF+HGLKEVKC
Sbjct: 155 TFLYFAHGLKEVKC 168

[Close]

BLAST of Spo05161.1 vs. UniProtKB/TrEMBL
Match: M5XPD7_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa009639mg PE=3 SV=1)

HSP 1 Score: 221.1 bits (562), Expect = 8.600e-55
Identity = 105/135 (77.78%), Postives = 118/135 (87.41%), Query Frame = 1


		  
Query: 7   QWIVKGGVDIDIGANPSAEDGGEDEGVDDQAQKVVDIVDVFRLQEQPSYDKKQFVAWVKR 66
           +W+V+G VD+DIGANPSAE GGEDEGVDDQ  KVVDIVD FRLQEQP +DKKQFV WVKR
Sbjct: 149 KWVVQGAVDVDIGANPSAEGGGEDEGVDDQTVKVVDIVDTFRLQEQPPFDKKQFVTWVKR 208

Query: 67  YIKNLTAKLEGEQAAEFKKNVEAATKYLMSKLSDLQFFVGESMQDECATVFAYYKEGAAD 126
           YIK LT KLEGE+  EFKKN+E ATK+L+SKLSDLQFFVGESM D+   VFAYYKEGA D
Sbjct: 209 YIKLLTPKLEGEKQEEFKKNIEGATKFLLSKLSDLQFFVGESMHDDGGLVFAYYKEGATD 268

Query: 127 PTFLYFSHGLKEVKC 142
           PTF+YF+HGL+EVKC
Sbjct: 269 PTFIYFAHGLREVKC 283

[Close]

BLAST of Spo05161.1 vs. UniProtKB/TrEMBL
Match: W5EA22_WHEAT (Uncharacterized protein OS=Triticum aestivum PE=3 SV=1)

HSP 1 Score: 221.1 bits (562), Expect = 8.600e-55
Identity = 106/134 (79.10%), Postives = 120/134 (89.55%), Query Frame = 1


		  
Query: 8   WIVKGGVDIDIGANPSAEDGGEDEGVDDQAQKVVDIVDVFRLQEQPSYDKKQFVAWVKRY 67
           W+V+G VD+DIGANPSAE GG+DEGVDDQA KVVDIVD FRLQEQP++DKKQF++ +KRY
Sbjct: 36  WVVQGAVDVDIGANPSAEGGGDDEGVDDQAVKVVDIVDTFRLQEQPAFDKKQFISHMKRY 95

Query: 68  IKNLTAKLEGEQAAEFKKNVEAATKYLMSKLSDLQFFVGESMQDECATVFAYYKEGAADP 127
           IKNLTAKLEG+    FKKNVE+ATKYL+SKL DLQFFVGESM D+   VFAYYKEGAADP
Sbjct: 96  IKNLTAKLEGDDLDVFKKNVESATKYLLSKLKDLQFFVGESMHDDGGVVFAYYKEGAADP 155

Query: 128 TFLYFSHGLKEVKC 142
           TFLYF+HGLKEVKC
Sbjct: 156 TFLYFAHGLKEVKC 169

[Close]

BLAST of Spo05161.1 vs. UniProtKB/TrEMBL
Match: M7YF70_TRIUA (Uncharacterized protein OS=Triticum urartu GN=TRIUR3_27725 PE=3 SV=1)

HSP 1 Score: 219.9 bits (559), Expect = 1.900e-54
Identity = 105/134 (78.36%), Postives = 120/134 (89.55%), Query Frame = 1


		  
Query: 8   WIVKGGVDIDIGANPSAEDGGEDEGVDDQAQKVVDIVDVFRLQEQPSYDKKQFVAWVKRY 67
           W+V+G VD+DIGANPSAE GG+DEGVDDQA KVVDIVD FRLQEQP++DKKQF++ +KRY
Sbjct: 35  WVVQGAVDVDIGANPSAEGGGDDEGVDDQAVKVVDIVDTFRLQEQPAFDKKQFISHMKRY 94

Query: 68  IKNLTAKLEGEQAAEFKKNVEAATKYLMSKLSDLQFFVGESMQDECATVFAYYKEGAADP 127
           IKNL+AKLEG+    FKKNVE+ATKYL+SKL DLQFFVGESM D+   VFAYYKEGAADP
Sbjct: 95  IKNLSAKLEGDDLDAFKKNVESATKYLLSKLKDLQFFVGESMHDDGGVVFAYYKEGAADP 154

Query: 128 TFLYFSHGLKEVKC 142
           TFLYF+HGLKEVKC
Sbjct: 155 TFLYFAHGLKEVKC 168

[Close]

BLAST of Spo05161.1 vs. ExPASy Swiss-Prot
Match: TCTP_HORVU (Translationally-controlled tumor protein homolog OS=Hordeum vulgare GN=TCTP PE=2 SV=2)

HSP 1 Score: 227.3 bits (578), Expect = 1.100e-58
Identity = 108/134 (80.60%), Postives = 123/134 (91.79%), Query Frame = 1


		  
Query: 8   WIVKGGVDIDIGANPSAEDGGEDEGVDDQAQKVVDIVDVFRLQEQPSYDKKQFVAWVKRY 67
           W+V+G VD+DIGANPSAE GGEDEGVDDQA KVVDIVD FRLQEQP++DKKQF+A++KRY
Sbjct: 35  WVVQGAVDVDIGANPSAEGGGEDEGVDDQAVKVVDIVDTFRLQEQPAFDKKQFIAYIKRY 94

Query: 68  IKNLTAKLEGEQAAEFKKNVEAATKYLMSKLSDLQFFVGESMQDECATVFAYYKEGAADP 127
           IKNLTAKLEGE+   FKKNVE+ATKYL+SKL DLQFFVGESM D+ + VFAYY+EGAADP
Sbjct: 95  IKNLTAKLEGEELDAFKKNVESATKYLLSKLKDLQFFVGESMHDDGSVVFAYYREGAADP 154

Query: 128 TFLYFSHGLKEVKC 142
           TFLYF+HGLKEVKC
Sbjct: 155 TFLYFAHGLKEVKC 168

[Close]

BLAST of Spo05161.1 vs. ExPASy Swiss-Prot
Match: TCTP_WHEAT (Translationally-controlled tumor protein homolog OS=Triticum aestivum GN=TCTP PE=2 SV=1)

HSP 1 Score: 219.5 bits (558), Expect = 2.300e-56
Identity = 105/134 (78.36%), Postives = 120/134 (89.55%), Query Frame = 1


		  
Query: 8   WIVKGGVDIDIGANPSAEDGGEDEGVDDQAQKVVDIVDVFRLQEQPSYDKKQFVAWVKRY 67
           W+V+G VD+DIGANPSAE GG+DEGVDDQA KVVDIVD FRLQEQP++DKKQF++ +KRY
Sbjct: 35  WVVQGAVDVDIGANPSAEGGGDDEGVDDQAVKVVDIVDTFRLQEQPAFDKKQFISHMKRY 94

Query: 68  IKNLTAKLEGEQAAEFKKNVEAATKYLMSKLSDLQFFVGESMQDECATVFAYYKEGAADP 127
           IKNL+AKLEG+    FKKNVE+ATKYL+SKL DLQFFVGESM D+   VFAYYKEGAADP
Sbjct: 95  IKNLSAKLEGDDLDVFKKNVESATKYLLSKLKDLQFFVGESMHDDGGVVFAYYKEGAADP 154

Query: 128 TFLYFSHGLKEVKC 142
           TFLYF+HGLKEVKC
Sbjct: 155 TFLYFAHGLKEVKC 168

[Close]

BLAST of Spo05161.1 vs. ExPASy Swiss-Prot
Match: TCTP_ORYSJ (Translationally-controlled tumor protein homolog OS=Oryza sativa subsp. japonica GN=TCTP PE=1 SV=1)

HSP 1 Score: 216.9 bits (551), Expect = 1.500e-55
Identity = 102/135 (75.56%), Postives = 118/135 (87.41%), Query Frame = 1


		  
Query: 7   QWIVKGGVDIDIGANPSAEDGGEDEGVDDQAQKVVDIVDVFRLQEQPSYDKKQFVAWVKR 66
           +W+V+G +D+DIGANPSAE GG+DEGVDDQA KVVDIVD FRLQEQP +DKKQFV ++KR
Sbjct: 34  KWVVQGAIDVDIGANPSAEGGGDDEGVDDQAVKVVDIVDTFRLQEQPPFDKKQFVTFMKR 93

Query: 67  YIKNLTAKLEGEQAAEFKKNVEAATKYLMSKLSDLQFFVGESMQDECATVFAYYKEGAAD 126
           YIKNL+AKL+ E+  EFKKN+E ATKYL+ KL DLQFFVGESM D+   VFAYYK+GA D
Sbjct: 94  YIKNLSAKLDAEKQEEFKKNIEGATKYLLGKLKDLQFFVGESMHDDGGLVFAYYKDGATD 153

Query: 127 PTFLYFSHGLKEVKC 142
           PTFLYFSHGLKEVKC
Sbjct: 154 PTFLYFSHGLKEVKC 168

[Close]

BLAST of Spo05161.1 vs. ExPASy Swiss-Prot
Match: TCTP_SOLTU (Translationally-controlled tumor protein homolog OS=Solanum tuberosum GN=TCTP PE=2 SV=2)

HSP 1 Score: 210.7 bits (535), Expect = 1.000e-53
Identity = 99/135 (73.33%), Postives = 117/135 (86.67%), Query Frame = 1


		  
Query: 7   QWIVKGGVDIDIGANPSAEDGGEDEGVDDQAQKVVDIVDVFRLQEQPSYDKKQFVAWVKR 66
           +W+V+G VD++IGANPSAE GGEDEGVDDQA KVVDIVD FRLQEQP++DKKQFV ++KR
Sbjct: 34  KWVVQGAVDVNIGANPSAEGGGEDEGVDDQAVKVVDIVDTFRLQEQPAFDKKQFVTYIKR 93

Query: 67  YIKNLTAKLEGEQAAEFKKNVEAATKYLMSKLSDLQFFVGESMQDECATVFAYYKEGAAD 126
           YIKNLT KLEGE    FKKN+E+ATK+L+SKL D QFFVGE M D+ A VFAYYK+G+AD
Sbjct: 94  YIKNLTPKLEGEAQEAFKKNIESATKFLLSKLKDFQFFVGEGMHDDSALVFAYYKDGSAD 153

Query: 127 PTFLYFSHGLKEVKC 142
           PTFLY + GLKE+KC
Sbjct: 154 PTFLYLAPGLKEIKC 168

[Close]

BLAST of Spo05161.1 vs. ExPASy Swiss-Prot
Match: TCTP_SOYBN (Translationally-controlled tumor protein homolog OS=Glycine max GN=TCTP PE=2 SV=1)

HSP 1 Score: 208.4 bits (529), Expect = 5.200e-53
Identity = 99/135 (73.33%), Postives = 116/135 (85.93%), Query Frame = 1


		  
Query: 7   QWIVKGGVDIDIGANPSAEDGGEDEGVDDQAQKVVDIVDVFRLQEQPSYDKKQFVAWVKR 66
           +W+VKG VD+DIGANPSAE GGEDEGVDD A KVVDIVD FRLQEQP++DKKQFV ++KR
Sbjct: 34  KWVVKGAVDVDIGANPSAEGGGEDEGVDDAAVKVVDIVDTFRLQEQPAFDKKQFVTFMKR 93

Query: 67  YIKNLTAKLEGEQAAEFKKNVEAATKYLMSKLSDLQFFVGESMQDECATVFAYYKEGAAD 126
           +IKNLT KL+ EQ   FKK++E ATKYL+SK+ D QFFVGESM D+   VFAYYK+GAAD
Sbjct: 94  FIKNLTPKLDAEQQELFKKHIEGATKYLLSKIKDFQFFVGESMGDDACLVFAYYKDGAAD 153

Query: 127 PTFLYFSHGLKEVKC 142
           PTFLYF++ LKEVKC
Sbjct: 154 PTFLYFAYALKEVKC 168

[Close]

BLAST of Spo05161.1 vs. TAIR (Arabidopsis)
Match: AT3G16640.1 (translationally controlled tumor protein)

HSP 1 Score: 199.1 bits (505), Expect = 1.800e-51
Identity = 93/135 (68.89%), Postives = 111/135 (82.22%), Query Frame = 1


		  
Query: 7   QWIVKGGVDIDIGANPSAEDGGEDEGVDDQAQKVVDIVDVFRLQEQPSYDKKQFVAWVKR 66
           +W+  G VD++IGANPSAE+GGEDEGVDD  QKVVDIVD FRLQEQP+YDKK F+A++K+
Sbjct: 34  KWVTVGAVDVNIGANPSAEEGGEDEGVDDSTQKVVDIVDTFRLQEQPTYDKKGFIAYIKK 93

Query: 67  YIKNLTAKLEGEQAAEFKKNVEAATKYLMSKLSDLQFFVGESMQDECATVFAYYKEGAAD 126
           YIK LT KL  E  A FKK +E ATK+L+ +LSD QFFVGE M D+   VFAYYKEG+ +
Sbjct: 94  YIKLLTPKLSEEDQAVFKKGIEGATKFLLPRLSDFQFFVGEGMHDDSTLVFAYYKEGSTN 153

Query: 127 PTFLYFSHGLKEVKC 142
           PTFLYF+HGLKEVKC
Sbjct: 154 PTFLYFAHGLKEVKC 168

[Close]

BLAST of Spo05161.1 vs. TAIR (Arabidopsis)
Match: AT3G05540.1 (Methionine sulfoxide reductase (MSS4-like) family protein)

HSP 1 Score: 192.6 bits (488), Expect = 1.700e-49
Identity = 94/136 (69.12%), Postives = 115/136 (84.56%), Query Frame = 1


		  
Query: 7   QWIVKGGVDIDIGANPSAEDGGEDEGVDDQAQKVVDIVDVFRLQEQPSYDKKQFVAWVKR 66
           +W+VKG +D DIGANP  E+GGEDEGVDDQA KVVDI+D FRLQEQPS+DKKQFV ++KR
Sbjct: 34  KWVVKGAMDFDIGANPG-EEGGEDEGVDDQAVKVVDIIDTFRLQEQPSFDKKQFVMFMKR 93

Query: 67  YIKNLTAKLEGEQAAEFKKNVEAATKYLMSKLSDLQFFVGESMQ-DECATVFAYYKEGAA 126
           YIK L+ KL+ E    FKK++E+ATK+LMSKL D QFFVGESM+ +E + VFAYY+EGA 
Sbjct: 94  YIKQLSPKLDSENQELFKKHIESATKFLMSKLKDFQFFVGESMEGEEGSLVFAYYREGAT 153

Query: 127 DPTFLYFSHGLKEVKC 142
           DPTFLY ++GLKE+KC
Sbjct: 154 DPTFLYLAYGLKEIKC 168

The following BLAST results are available for this feature:

BLAST of Spo05161.1 vs. NCBI nr
BLAST of Spo05161.1 vs. UniProtKB/TrEMBL
BLAST of Spo05161.1 vs. ExPASy Swiss-Prot
BLAST of Spo05161.1 vs. TAIR (Arabidopsis)

BLAST of Spo05161.1 vs. NCBI nr
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. NCBI nr)
Total hits: 5


Match Name	E-value	Identity	Description
gi\|902211367\|gb\|KNA16696.1\|	1.4e-69	99.2	hypothetical protein SOVF_0867...	[more]
gi\|20140865\|sp\|Q9M5G3.2\|TCTP_HORVU	1.7e-56	80.6	RecName: Full=Translationally-...	[more]
gi\|694322277\|ref\|XP_009352274.1\|	7.3e-55	79.2	PREDICTED: translationally-con...	[more]
gi\|657996563\|ref\|XP_008390652.1\|	9.5e-55	79.2	PREDICTED: translationally-con...	[more]
gi\|645233137\|ref\|XP_008223198.1\|	1.2e-54	77.7	PREDICTED: translationally-con...	[more]

BLAST of Spo05161.1 vs. UniProtKB/TrEMBL
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. UniprotKB/TrEMBL)
Total hits: 5


Match Name	E-value	Identity	Description
A0A0K9RB24_SPIOL	9.5e-70	99.2	Uncharacterized protein OS=Spi...	[more]
F2DWT1_HORVD	1.2e-56	80.6	Predicted protein OS=Hordeum v...	[more]
M5XPD7_PRUPE	8.6e-55	77.7	Uncharacterized protein OS=Pru...	[more]
W5EA22_WHEAT	8.6e-55	79.1	Uncharacterized protein OS=Tri...	[more]
M7YF70_TRIUA	1.9e-54	78.3	Uncharacterized protein OS=Tri...	[more]

BLAST of Spo05161.1 vs. ExPASy Swiss-Prot
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. ExPASy SwissProt)
Total hits: 5


Match Name	E-value	Identity	Description
TCTP_HORVU	1.1e-58	80.6	Translationally-controlled tum...	[more]
TCTP_WHEAT	2.3e-56	78.3	Translationally-controlled tum...	[more]
TCTP_ORYSJ	1.5e-55	75.5	Translationally-controlled tum...	[more]
TCTP_SOLTU	1.0e-53	73.3	Translationally-controlled tum...	[more]
TCTP_SOYBN	5.2e-53	73.3	Translationally-controlled tum...	[more]

BLAST of Spo05161.1 vs. TAIR (Arabidopsis)
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. TAIR)
Total hits: 2


Match Name	E-value	Identity	Description
AT3G16640.1	1.8e-51	68.8	translationally controlled tum...	[more]
AT3G05540.1	1.7e-49	69.1	Methionine sulfoxide reductase...	[more]

InterPro

Analysis Name: InterPro Annotations of S. oleracea
Date Performed: 2018-06-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR011057	Mss4-like	unknown	SSF51316	Mss4-like	coord: 7..141 score: 1.29
IPR011323	Mss4/translationally controlled tumour-associated TCTP	GENE3D	2.170.150.10		coord: 5..141 score: 5.7
IPR018103	Translationally controlled tumour protein, conserved site	PROSITE	PS01002	TCTP_1	coord: 18..28 scor
IPR018105	Translationally controlled tumour protein	PRINTS	PR01653	TCTPROTEIN	coord: 19..30 score: 2.7E-11coord: 33..52 score: 2.7
IPR018105	Translationally controlled tumour protein	PANTHER	PTHR11991	TRANSLATIONALLY CONTROLLED TUMOR PROTEIN-RELATED	coord: 8..141 score: 2.6
IPR018105	Translationally controlled tumour protein	PFAM	PF00838	TCTP	coord: 4..137 score: 8.2

GO Annotation

GO Assignments

This mRNA is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0005737	cytoplasm