Spo25307.1 (mRNA) | SpinachBase

Overview


Name	Spo25307.1
Type	mRNA
Organism	Spinacia oleracea (Spinach)
Description	ELF4-like protein
Location	chr2 : 6189879 .. 6193289 (+)
Sequence length	486

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGAGAGTAACAAGTGAGTATTCCGTATGGATATTAGGGATATCAATTTAAACTTATATTGATTGTTTTCAAAATTCATGTCTTGTCTAATAAGATCATTTTCAACTTTTTCATATTGAAACTTATTGCAACTTATCTGAATTTATCTGAACTTATTGAAAATTATCTAAACTTATCTGAACTTATAGGAGTTGAAAATAAAGTCTTATAAGTTGAAGAAAACAAGGTCATACACTCTCTACAAATATGACTTCACGAGTCATATAAACATTTTCGAAATTGATTTTGACACACCTTTATGTGAACATAGCAAAGTGGATTTAAGACTTGGATATGTTGAGTAAAATAAAAATCGGCATCTCCTTGACATATCATTCATTCATTCATGGTAGATCTAAGTAGGAAATCCAAAGTATAATATCCTCTTGATTGGATAAAGATTATCATAGGAAAGAGCCCAACACATATTTAGTGGACCCGAATATTGATGGCTTAGTACCTCACATAGCATTTAGGATTTACGAAACTGTCCAAACTAACTCAACAAATGTGTTTTTAAAACCACCTCTGTCCTCAGATCTGGATGAAATCATCAAACTATTTCCCACCAATTAAATACTTTATCTCATTTTTCTAAATGACACAATTATTTAGATATGTTAGCCAATGCACAATTTTGAATACTAACATCTTTTATTATGGATAGAAAAAATTATAAAAAATTGATATCTCAAAAACATTTATTGGACGAATCTAATAATATCCCACACGACTATGTTTTTTCCTATGTATAAGTCACAAGAGGAAGTCAAATGAGCTCGTATGAATTGTATCAAAAACTAAATTGTTTCATGTAAATAAGAACAGAGGAAGTAGTCTCAAACCAAAATATACGAAGTAACATTTTTCATAAAATAAATTAAGGTCAATTATAAAATGGTGGAAATTCTTATATGCACCCGAATGCATTATAATACTGAACTCAAGAGTATATATATACATGAGTTGTAAACTCTTTTAATGAATATTTTTCGGTCGTTTAAGACTTTCAAATGAGCATAAGTATACTTCTGATTGTGCATATCTATAGCATTCGGAGGCATTTTATCGTTAAAACATTTACACTCGATGTATAATTAAAGTGGTGATTTATTTACTAAAAAATCAATTCCGTAAAAATAAACTTGTGTGTTCATGATAATTAAAAATCATAGAAATTCTTATATGCACCCAATTCACCGTTGAATTGCATCTAATTGTATATGTACACATGTGCGTTTTTCTATAAAAATGCAACGAATAATATCCGCTTATTTAAAAGTAAAAAATATTAAAAAAATAAGCAGAAATATAGATTATGATAAAAATAACTGTCATTTTCAATTCTCACATTTCATATTCATTTTTCTCTGTTAGTTTTTCTAAAATTATTTTTATGCATAAGCAGTATAACACACCCGGTTTACTAGAGCTTAACTCTAACTATATCCGGATCCGATACATGTTCCACACCTTACTACTCCGTATTTATAATGGGTCAGTCTTCCAACTAGAGTTTCTGCATACGAAAATGCTCAAATCTGAAACCCCCTAAACGACATCAAACTGCTTACAACAAATCCAAAACCTTTATTTTTTTTTTCCATTATATTCGGATTCAATTCTAAAATATATAAATAGTGTAAAATACACAAACGTTGCTGAGTATTAAAAATTCGGAGAAAGTGTAATAAATTTTCGTGAATAATTTTTCCTTAAAAGATCTCCTCCGTAAAATTTATAAAAAGAGGAGAGAGAAAGATCAACATTTTAGACAGCAGCGTGAGCGTGACTATCAAATCTTCATATTCTCTCTCCTTTCTCTCCCTCTTTTTTTTTCTTTTTTATTTTTTTTTATTTTAATACAAAATACATCTTCTGTTCTTCTTTCCGTCTTCTCCAAATTCACATCTACTGAAAGAAAGAGGAGCGTTCTTCTGATTTCAAGAATCAAAGTTTTCCCAAGAAAATCGAATTCCAGAGGTAAAATCACTCAATTTCTCTCATTTACTTAACTATTTTCGATTTCTAATTTTTAATCAATTTTGCTTAATTTAACCCACTAATTGTACTACGGCCGTATGAATTATTATTATTATTGTTCGTAGATTACAGAATTTGTAATTTCGCGTCATTGACTACATACAAATACCTATTATTACATACAAGTTTGATGGAGATTCTTTGTTTTGAAACTGTGAAAAACTTTAGGTGGGTTTTTCAGAGTACATTTGACAAAAGGTTCCCTTTTATGGAAAATGGGATCTGCTTTTCACATCTCATCATACCCAAAAAAACAGAAAAAGAATTTATAATTATCACAACAGTTAATTTTTTTTTCATCTCCCCCCAGTAATCCAAATTTACCTTGTCCTTGGTTTTCAGGATTATAAACAAATAAATTAAGATTATGATTTTGGTTTGTCTTACCTCTATTTGATGGGTTTTTATGGATTGGGGGCGAAATAATGAGGTTTTGTTGTCGTAATTATGGATTCCATATATGACTAAGGTTTGTTAAGATTGTGATTATACTCAAACCTCGATATGGGTAAGGTTTGTTGGTTAAGATAGTGATATTTTGTCCTGTAATTATGGATTCGAACCTCTGTCTATATGAGTAAGGTTTTGTTTGTTAAGATTGTGAATATATTAATATATTCAAACCTCGATATGAATAAGGTTTTGTTTGGTTAAGATTGTGAATTTATGTGGTAATTATGGATTCGGACTCGATTTAGCATTGTTAAGATTGTGATTATATTCAAACCTTGATATGAGTAAGGTTTTGTTTGTTAAGATTGTGAATTTATGTCGTAATTATGGATTCTGGCTCGATTTAGCATTGTTAAGATTGTGAATTTACTACTTTTAACCTATTCCTACCTAATGAATTATGTGTTTTTTCTTTCATTTTCGGAATCTGTTTGGCAGTTTGGTGAAAGGACAATTGGAATTGGAATTGGAATTGGAGTTGGAATTGGAACTGGAATTAGAACTGGAAAAGGGGGGAAATTGATTCTAAAAATGGAAGGTGACACATTTTCAGGACTAGGAAATGGTACACAGATAGACAGTAAAGTATTGCAGACATTTCAGAAGAGTTTTGTGCAAGTTCAGAGCATATTGGATCAAAACAGATTGCTAATCAATGAGATCAACCAAAACCATGAATCAAGAATTCCTGATAATCTTTCCAGAAATGTGGGATTAATAAGGGAGCTTAACAATAACATCAGAAGAGTTGTTGATCTTTATTCTGATCTTTCTCATTCCTTAACAAGATCCATGGAAGCATCATCCGAAGGCGATTCAAGTGGCGTTCTAAAATCCGATGCCAAAGCTACCCACAAGAGAAATCGGCCCGGTTAG

mRNA sequence

ATGAGAGTAACAAAATCAAAGTTTTCCCAAGAAAATCGAATTCCAGAGTTTGGTGAAAGGACAATTGGAATTGGAATTGGAATTGGAGTTGGAATTGGAACTGGAATTAGAACTGGAAAAGGGGGGAAATTGATTCTAAAAATGGAAGGTGACACATTTTCAGGACTAGGAAATGGTACACAGATAGACAGTAAAGTATTGCAGACATTTCAGAAGAGTTTTGTGCAAGTTCAGAGCATATTGGATCAAAACAGATTGCTAATCAATGAGATCAACCAAAACCATGAATCAAGAATTCCTGATAATCTTTCCAGAAATGTGGGATTAATAAGGGAGCTTAACAATAACATCAGAAGAGTTGTTGATCTTTATTCTGATCTTTCTCATTCCTTAACAAGATCCATGGAAGCATCATCCGAAGGCGATTCAAGTGGCGTTCTAAAATCCGATGCCAAAGCTACCCACAAGAGAAATCGGCCCGGTTAG

Coding sequence (CDS)

ATGAGAGTAACAAAATCAAAGTTTTCCCAAGAAAATCGAATTCCAGAGTTTGGTGAAAGGACAATTGGAATTGGAATTGGAATTGGAGTTGGAATTGGAACTGGAATTAGAACTGGAAAAGGGGGGAAATTGATTCTAAAAATGGAAGGTGACACATTTTCAGGACTAGGAAATGGTACACAGATAGACAGTAAAGTATTGCAGACATTTCAGAAGAGTTTTGTGCAAGTTCAGAGCATATTGGATCAAAACAGATTGCTAATCAATGAGATCAACCAAAACCATGAATCAAGAATTCCTGATAATCTTTCCAGAAATGTGGGATTAATAAGGGAGCTTAACAATAACATCAGAAGAGTTGTTGATCTTTATTCTGATCTTTCTCATTCCTTAACAAGATCCATGGAAGCATCATCCGAAGGCGATTCAAGTGGCGTTCTAAAATCCGATGCCAAAGCTACCCACAAGAGAAATCGGCCCGGTTAG

Protein sequence

MRVTKSKFSQENRIPEFGERTIGIGIGIGVGIGTGIRTGKGGKLILKMEGDTFSGLGNGTQIDSKVLQTFQKSFVQVQSILDQNRLLINEINQNHESRIPDNLSRNVGLIRELNNNIRRVVDLYSDLSHSLTRSMEASSEGDSSGVLKSDAKATHKRNRPG

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
Spo25307	Spo25307	gene

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
Spo25307.1	Spo25307.1-protein	polypeptide

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Spo25307.1.exon.1	Spo25307.1.exon.1	exon
Spo25307.1.exon.2	Spo25307.1.exon.2	exon
Spo25307.1.exon.3	Spo25307.1.exon.3	exon

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Spo25307.1.CDS.1	Spo25307.1.CDS.1	CDS
Spo25307.1.CDS.2	Spo25307.1.CDS.2	CDS
Spo25307.1.CDS.3	Spo25307.1.CDS.3	CDS

Homology

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BLAST of Spo25307.1 vs. NCBI nr
Match: gi|902213959|gb|KNA17377.1| (hypothetical protein SOVF_080550 [Spinacia oleracea])

HSP 1 Score: 217.2 bits (552), Expect = 2.000e-53
Identity = 114/114 (100.00%), Postives = 114/114 (100.00%), Query Frame = 1


		  
Query: 48  MEGDTFSGLGNGTQIDSKVLQTFQKSFVQVQSILDQNRLLINEINQNHESRIPDNLSRNV 107
           MEGDTFSGLGNGTQIDSKVLQTFQKSFVQVQSILDQNRLLINEINQNHESRIPDNLSRNV
Sbjct: 1   MEGDTFSGLGNGTQIDSKVLQTFQKSFVQVQSILDQNRLLINEINQNHESRIPDNLSRNV 60

Query: 108 GLIRELNNNIRRVVDLYSDLSHSLTRSMEASSEGDSSGVLKSDAKATHKRNRPG 162
           GLIRELNNNIRRVVDLYSDLSHSLTRSMEASSEGDSSGVLKSDAKATHKRNRPG
Sbjct: 61  GLIRELNNNIRRVVDLYSDLSHSLTRSMEASSEGDSSGVLKSDAKATHKRNRPG 114

[Close]

BLAST of Spo25307.1 vs. NCBI nr
Match: gi|731377917|ref|XP_010668016.1| (PREDICTED: protein ELF4-LIKE 4 [Beta vulgaris subsp. vulgaris])

HSP 1 Score: 213.0 bits (541), Expect = 3.800e-52
Identity = 111/114 (97.37%), Postives = 112/114 (98.25%), Query Frame = 1


		  
Query: 48  MEGDTFSGLGNGTQIDSKVLQTFQKSFVQVQSILDQNRLLINEINQNHESRIPDNLSRNV 107
           MEGDTFSGLGNGTQIDSKVLQTFQKSFVQVQSILDQNRLLINEINQNHESRIPDNLSRNV
Sbjct: 1   MEGDTFSGLGNGTQIDSKVLQTFQKSFVQVQSILDQNRLLINEINQNHESRIPDNLSRNV 60

Query: 108 GLIRELNNNIRRVVDLYSDLSHSLTRSMEASSEGDSSGVLKSDAKATHKRNRPG 162
           GLIRELNNNIRRVVDLY DLSH+LTRSMEASSEGDSSG LKSDAKATHKRNRPG
Sbjct: 61  GLIRELNNNIRRVVDLYGDLSHTLTRSMEASSEGDSSGALKSDAKATHKRNRPG 114

[Close]

BLAST of Spo25307.1 vs. NCBI nr
Match: gi|802628260|ref|XP_012077023.1| (PREDICTED: protein ELF4-LIKE 4 [Jatropha curcas])

HSP 1 Score: 197.6 bits (501), Expect = 1.700e-47
Identity = 102/113 (90.27%), Postives = 108/113 (95.58%), Query Frame = 1


		  
Query: 48  MEGDTFSGLGNGTQIDSKVLQTFQKSFVQVQSILDQNRLLINEINQNHESRIPDNLSRNV 107
           MEGDTFSGLGNGTQIDSK+LQTFQK+FVQVQ ILDQNRLLINEINQNHES+IPDNLSRNV
Sbjct: 1   MEGDTFSGLGNGTQIDSKILQTFQKNFVQVQHILDQNRLLINEINQNHESKIPDNLSRNV 60

Query: 108 GLIRELNNNIRRVVDLYSDLSHSLTRSMEASSEGDSSGVLKSDAKATHKRNRP 161
           GLIRELNNNIRRVVDLY+DLS S T+S+EASSEGDSSGVLKSD KA HKRNRP
Sbjct: 61  GLIRELNNNIRRVVDLYADLSSSFTKSIEASSEGDSSGVLKSDGKAGHKRNRP 113

[Close]

BLAST of Spo25307.1 vs. NCBI nr
Match: gi|1012346664|gb|KYP57856.1| (hypothetical protein KK1_004137, partial [Cajanus cajan])

HSP 1 Score: 195.3 bits (495), Expect = 8.300e-47
Identity = 99/114 (86.84%), Postives = 108/114 (94.74%), Query Frame = 1


		  
Query: 47  KMEGDTFSGLGNGTQIDSKVLQTFQKSFVQVQSILDQNRLLINEINQNHESRIPDNLSRN 106
           KMEGDTFSGLGNGTQIDSK+LQTFQKSFVQVQ+ILDQNR+LINEINQNHES++PDNLSRN
Sbjct: 1   KMEGDTFSGLGNGTQIDSKILQTFQKSFVQVQNILDQNRVLINEINQNHESKVPDNLSRN 60

Query: 107 VGLIRELNNNIRRVVDLYSDLSHSLTRSMEASSEGDSSGVLKSDAKATHKRNRP 161
           VGLIRELNNNIRRVVDLY+DLS S T+SME SSEGDSSG +KSD KA HKR+RP
Sbjct: 61  VGLIRELNNNIRRVVDLYADLSSSFTKSMEVSSEGDSSGAVKSDGKAGHKRHRP 114

[Close]

BLAST of Spo25307.1 vs. NCBI nr
Match: gi|661893296|emb|CDP03105.1| (unnamed protein product [Coffea canephora])

HSP 1 Score: 195.3 bits (495), Expect = 8.300e-47
Identity = 101/114 (88.60%), Postives = 106/114 (92.98%), Query Frame = 1


		  
Query: 48  MEGDTFSGLGNGTQIDSKVLQTFQKSFVQVQSILDQNRLLINEINQNHESRIPDNLSRNV 107
           MEGD FSGLGNGTQID KVLQTFQKSFVQVQ+ILDQNRLLINEINQNHES+IPDNLSRNV
Sbjct: 1   MEGDAFSGLGNGTQIDGKVLQTFQKSFVQVQNILDQNRLLINEINQNHESKIPDNLSRNV 60

Query: 108 GLIRELNNNIRRVVDLYSDLSHSLTRSMEASSEGDSSGVLKSDAKATHKRNRPG 162
           GLIRELNNNIRRVVDLY+DLS S T+SM+ASSEGDSSG  KSD KA HKRNRPG
Sbjct: 61  GLIRELNNNIRRVVDLYADLSTSFTKSMDASSEGDSSGAFKSDGKAGHKRNRPG 114

[Close]

BLAST of Spo25307.1 vs. UniProtKB/TrEMBL
Match: A0A0K9REU7_SPIOL (Uncharacterized protein OS=Spinacia oleracea GN=SOVF_080550 PE=4 SV=1)

HSP 1 Score: 217.2 bits (552), Expect = 1.400e-53
Identity = 114/114 (100.00%), Postives = 114/114 (100.00%), Query Frame = 1


		  
Query: 48  MEGDTFSGLGNGTQIDSKVLQTFQKSFVQVQSILDQNRLLINEINQNHESRIPDNLSRNV 107
           MEGDTFSGLGNGTQIDSKVLQTFQKSFVQVQSILDQNRLLINEINQNHESRIPDNLSRNV
Sbjct: 1   MEGDTFSGLGNGTQIDSKVLQTFQKSFVQVQSILDQNRLLINEINQNHESRIPDNLSRNV 60

Query: 108 GLIRELNNNIRRVVDLYSDLSHSLTRSMEASSEGDSSGVLKSDAKATHKRNRPG 162
           GLIRELNNNIRRVVDLYSDLSHSLTRSMEASSEGDSSGVLKSDAKATHKRNRPG
Sbjct: 61  GLIRELNNNIRRVVDLYSDLSHSLTRSMEASSEGDSSGVLKSDAKATHKRNRPG 114

[Close]

BLAST of Spo25307.1 vs. UniProtKB/TrEMBL
Match: C6ZKH2_BETVU (ELF4-like protein OS=Beta vulgaris PE=2 SV=1)

HSP 1 Score: 213.0 bits (541), Expect = 2.700e-52
Identity = 111/114 (97.37%), Postives = 112/114 (98.25%), Query Frame = 1


		  
Query: 48  MEGDTFSGLGNGTQIDSKVLQTFQKSFVQVQSILDQNRLLINEINQNHESRIPDNLSRNV 107
           MEGDTFSGLGNGTQIDSKVLQTFQKSFVQVQSILDQNRLLINEINQNHESRIPDNLSRNV
Sbjct: 1   MEGDTFSGLGNGTQIDSKVLQTFQKSFVQVQSILDQNRLLINEINQNHESRIPDNLSRNV 60

Query: 108 GLIRELNNNIRRVVDLYSDLSHSLTRSMEASSEGDSSGVLKSDAKATHKRNRPG 162
           GLIRELNNNIRRVVDLY DLSH+LTRSMEASSEGDSSG LKSDAKATHKRNRPG
Sbjct: 61  GLIRELNNNIRRVVDLYGDLSHTLTRSMEASSEGDSSGALKSDAKATHKRNRPG 114

[Close]

BLAST of Spo25307.1 vs. UniProtKB/TrEMBL
Match: A0A0J8B528_BETVU (Uncharacterized protein OS=Beta vulgaris subsp. vulgaris GN=BVRB_013600 PE=4 SV=1)

HSP 1 Score: 213.0 bits (541), Expect = 2.700e-52
Identity = 111/114 (97.37%), Postives = 112/114 (98.25%), Query Frame = 1


		  
Query: 48  MEGDTFSGLGNGTQIDSKVLQTFQKSFVQVQSILDQNRLLINEINQNHESRIPDNLSRNV 107
           MEGDTFSGLGNGTQIDSKVLQTFQKSFVQVQSILDQNRLLINEINQNHESRIPDNLSRNV
Sbjct: 1   MEGDTFSGLGNGTQIDSKVLQTFQKSFVQVQSILDQNRLLINEINQNHESRIPDNLSRNV 60

Query: 108 GLIRELNNNIRRVVDLYSDLSHSLTRSMEASSEGDSSGVLKSDAKATHKRNRPG 162
           GLIRELNNNIRRVVDLY DLSH+LTRSMEASSEGDSSG LKSDAKATHKRNRPG
Sbjct: 61  GLIRELNNNIRRVVDLYGDLSHTLTRSMEASSEGDSSGALKSDAKATHKRNRPG 114

[Close]

BLAST of Spo25307.1 vs. UniProtKB/TrEMBL
Match: A0A067KQ00_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_07470 PE=4 SV=1)

HSP 1 Score: 197.6 bits (501), Expect = 1.200e-47
Identity = 102/113 (90.27%), Postives = 108/113 (95.58%), Query Frame = 1


		  
Query: 48  MEGDTFSGLGNGTQIDSKVLQTFQKSFVQVQSILDQNRLLINEINQNHESRIPDNLSRNV 107
           MEGDTFSGLGNGTQIDSK+LQTFQK+FVQVQ ILDQNRLLINEINQNHES+IPDNLSRNV
Sbjct: 1   MEGDTFSGLGNGTQIDSKILQTFQKNFVQVQHILDQNRLLINEINQNHESKIPDNLSRNV 60

Query: 108 GLIRELNNNIRRVVDLYSDLSHSLTRSMEASSEGDSSGVLKSDAKATHKRNRP 161
           GLIRELNNNIRRVVDLY+DLS S T+S+EASSEGDSSGVLKSD KA HKRNRP
Sbjct: 61  GLIRELNNNIRRVVDLYADLSSSFTKSIEASSEGDSSGVLKSDGKAGHKRNRP 113

[Close]

BLAST of Spo25307.1 vs. UniProtKB/TrEMBL
Match: A0A068U3H1_COFCA (Uncharacterized protein OS=Coffea canephora GN=GSCOC_T00041590001 PE=4 SV=1)

HSP 1 Score: 195.3 bits (495), Expect = 5.800e-47
Identity = 101/114 (88.60%), Postives = 106/114 (92.98%), Query Frame = 1


		  
Query: 48  MEGDTFSGLGNGTQIDSKVLQTFQKSFVQVQSILDQNRLLINEINQNHESRIPDNLSRNV 107
           MEGD FSGLGNGTQID KVLQTFQKSFVQVQ+ILDQNRLLINEINQNHES+IPDNLSRNV
Sbjct: 1   MEGDAFSGLGNGTQIDGKVLQTFQKSFVQVQNILDQNRLLINEINQNHESKIPDNLSRNV 60

Query: 108 GLIRELNNNIRRVVDLYSDLSHSLTRSMEASSEGDSSGVLKSDAKATHKRNRPG 162
           GLIRELNNNIRRVVDLY+DLS S T+SM+ASSEGDSSG  KSD KA HKRNRPG
Sbjct: 61  GLIRELNNNIRRVVDLYADLSTSFTKSMDASSEGDSSGAFKSDGKAGHKRNRPG 114

[Close]

BLAST of Spo25307.1 vs. ExPASy Swiss-Prot
Match: EF4L4_ARATH (Protein ELF4-LIKE 4 OS=Arabidopsis thaliana GN=EFL4 PE=2 SV=1)

HSP 1 Score: 158.7 bits (400), Expect = 5.400e-38
Identity = 83/114 (72.81%), Postives = 92/114 (80.70%), Query Frame = 1


		  
Query: 48  MEGDTFSGLGNGTQIDSKVLQTFQKSFVQVQSILDQNRLLINEINQNHESRIPDNLSRNV 107
           MEGD  SG G+   +D K+LQ+FQKSFV VQ ILDQNRLLINEINQNHES+ PDNL RNV
Sbjct: 1   MEGDVLSGFGDRHNMDGKLLQSFQKSFVDVQDILDQNRLLINEINQNHESKQPDNLGRNV 60

Query: 108 GLIRELNNNIRRVVDLYSDLSHSLTRSMEASSEGDSSGVLKSDAKATHKRNRPG 162
           GLI+ELNNNIRRV  LY DLSHS  RS++ASSEG+SSG LKSD KA  KR R G
Sbjct: 61  GLIKELNNNIRRVASLYGDLSHSFARSVDASSEGESSGTLKSDGKANQKRFRSG 114

[Close]

BLAST of Spo25307.1 vs. ExPASy Swiss-Prot
Match: EF4L2_ARATH (Protein ELF4-LIKE 2 OS=Arabidopsis thaliana GN=EFL2 PE=2 SV=1)

HSP 1 Score: 152.1 bits (383), Expect = 5.000e-36
Identity = 82/116 (70.69%), Postives = 93/116 (80.17%), Query Frame = 1


		  
Query: 47  KMEGDTFSGLGNGTQIDSKVLQTFQKSFVQVQSILDQNRLLINEINQNHESRIPDNLSRN 106
           +MEGD +SG G   Q+D K+LQ FQKSFVQVQ ILDQNRLLINEINQNHES+  D+L RN
Sbjct: 4   RMEGDVYSGFGERYQMDGKLLQNFQKSFVQVQDILDQNRLLINEINQNHESKQADHLGRN 63

Query: 107 VGLIRELNNNIRRVVDLYSDLSHSLTRSMEASSEGDSSGVLKSDAKATH-KRNRPG 162
           VGLIRELNNNIR V  LY DLSHS  RS++ASSEG+S+G LKSD KA + KR R G
Sbjct: 64  VGLIRELNNNIRTVASLYGDLSHSFARSVDASSEGESTGTLKSDGKANNQKRFRSG 119

[Close]

BLAST of Spo25307.1 vs. ExPASy Swiss-Prot
Match: EF4L3_ARATH (Protein ELF4-LIKE 3 OS=Arabidopsis thaliana GN=EFL3 PE=3 SV=1)

HSP 1 Score: 144.8 bits (364), Expect = 8.100e-34
Identity = 75/98 (76.53%), Postives = 87/98 (88.78%), Query Frame = 1


		  
Query: 48  MEGDTFSGL-GNGTQIDSKVLQTFQKSFVQVQSILDQNRLLINEINQNHESRIPDNLSRN 107
           MEGDT S + G+G Q+D K+LQTF+KSFVQVQ+ILD NRLLINEINQNHES+IPDNL RN
Sbjct: 1   MEGDTISRMMGSGVQMDGKILQTFEKSFVQVQNILDHNRLLINEINQNHESKIPDNLGRN 60

Query: 108 VGLIRELNNNIRRVVDLYSDLSHSLTRSMEASSEGDSS 145
           VGLIRELNNN+RRV  LY DLS++ ++SMEASSEGDSS
Sbjct: 61  VGLIRELNNNVRRVAHLYVDLSNNFSKSMEASSEGDSS 98

[Close]

BLAST of Spo25307.1 vs. ExPASy Swiss-Prot
Match: ELF4_ARATH (Protein EARLY FLOWERING 4 OS=Arabidopsis thaliana GN=ELF4 PE=1 SV=1)

HSP 1 Score: 79.0 bits (193), Expect = 5.400e-14
Identity = 38/83 (45.78%), Postives = 56/83 (67.47%), Query Frame = 1


		  
Query: 63  DSKVLQTFQKSFVQVQSILDQNRLLINEINQNHESRIPDNLSRNVGLIRELNNNIRRVVD 122
           D  + +   ++F QVQS+LD+NR LI ++N NH+SR+ DN+S+NV LI+ELN NI +VV+
Sbjct: 22  DPAMWENLDRNFRQVQSVLDRNRSLIQQVNDNHQSRMADNMSKNVALIQELNGNISKVVN 81

Query: 123 LYSDLSHSLTRSMEASSEGDSSG 146
           +YSDL+ S +        G   G
Sbjct: 82  MYSDLNTSFSSGFHGGKNGHDGG 104

[Close]

BLAST of Spo25307.1 vs. ExPASy Swiss-Prot
Match: EF4L1_ARATH (Protein ELF4-LIKE 1 OS=Arabidopsis thaliana GN=EFL1 PE=2 SV=1)

HSP 1 Score: 75.9 bits (185), Expect = 4.600e-13
Identity = 40/86 (46.51%), Postives = 57/86 (66.28%), Query Frame = 1


		  
Query: 63  DSKVLQTFQKSFVQVQSILDQNRLLINEINQNHESRIPDNLSRNVGLIRELNNNIRRVVD 122
           D +V  T    F + Q  LDQNR LI  +N+NH SRIPDN+SRNVGLI E+N NI +V++
Sbjct: 34  DVEVWDTLSNGFKRAQLYLDQNRDLIQRVNENHMSRIPDNVSRNVGLINEINGNISQVME 93

Query: 123 LYSDLSHSLTRSME----ASSEGDSS 145
           +YSDLS +  +  +     + +GD++
Sbjct: 94  IYSDLSLNFAKKFDQRRRTTKDGDTT 119

[Close]

BLAST of Spo25307.1 vs. TAIR (Arabidopsis)
Match: AT1G17455.1 (ELF4-like 4)

HSP 1 Score: 158.7 bits (400), Expect = 3.000e-39
Identity = 83/114 (72.81%), Postives = 92/114 (80.70%), Query Frame = 1


		  
Query: 48  MEGDTFSGLGNGTQIDSKVLQTFQKSFVQVQSILDQNRLLINEINQNHESRIPDNLSRNV 107
           MEGD  SG G+   +D K+LQ+FQKSFV VQ ILDQNRLLINEINQNHES+ PDNL RNV
Sbjct: 1   MEGDVLSGFGDRHNMDGKLLQSFQKSFVDVQDILDQNRLLINEINQNHESKQPDNLGRNV 60

Query: 108 GLIRELNNNIRRVVDLYSDLSHSLTRSMEASSEGDSSGVLKSDAKATHKRNRPG 162
           GLI+ELNNNIRRV  LY DLSHS  RS++ASSEG+SSG LKSD KA  KR R G
Sbjct: 61  GLIKELNNNIRRVASLYGDLSHSFARSVDASSEGESSGTLKSDGKANQKRFRSG 114

[Close]

BLAST of Spo25307.1 vs. TAIR (Arabidopsis)
Match: AT1G72630.1 (ELF4-like 2)

HSP 1 Score: 152.1 bits (383), Expect = 2.800e-37
Identity = 82/116 (70.69%), Postives = 93/116 (80.17%), Query Frame = 1


		  
Query: 47  KMEGDTFSGLGNGTQIDSKVLQTFQKSFVQVQSILDQNRLLINEINQNHESRIPDNLSRN 106
           +MEGD +SG G   Q+D K+LQ FQKSFVQVQ ILDQNRLLINEINQNHES+  D+L RN
Sbjct: 4   RMEGDVYSGFGERYQMDGKLLQNFQKSFVQVQDILDQNRLLINEINQNHESKQADHLGRN 63

Query: 107 VGLIRELNNNIRRVVDLYSDLSHSLTRSMEASSEGDSSGVLKSDAKATH-KRNRPG 162
           VGLIRELNNNIR V  LY DLSHS  RS++ASSEG+S+G LKSD KA + KR R G
Sbjct: 64  VGLIRELNNNIRTVASLYGDLSHSFARSVDASSEGESTGTLKSDGKANNQKRFRSG 119

[Close]

BLAST of Spo25307.1 vs. TAIR (Arabidopsis)
Match: AT2G06255.1 (ELF4-like 3)

HSP 1 Score: 144.8 bits (364), Expect = 4.500e-35
Identity = 75/98 (76.53%), Postives = 87/98 (88.78%), Query Frame = 1


		  
Query: 48  MEGDTFSGL-GNGTQIDSKVLQTFQKSFVQVQSILDQNRLLINEINQNHESRIPDNLSRN 107
           MEGDT S + G+G Q+D K+LQTF+KSFVQVQ+ILD NRLLINEINQNHES+IPDNL RN
Sbjct: 1   MEGDTISRMMGSGVQMDGKILQTFEKSFVQVQNILDHNRLLINEINQNHESKIPDNLGRN 60

Query: 108 VGLIRELNNNIRRVVDLYSDLSHSLTRSMEASSEGDSS 145
           VGLIRELNNN+RRV  LY DLS++ ++SMEASSEGDSS
Sbjct: 61  VGLIRELNNNVRRVAHLYVDLSNNFSKSMEASSEGDSS 98

[Close]

BLAST of Spo25307.1 vs. TAIR (Arabidopsis)
Match: AT2G40080.1 (Protein of unknown function (DUF1313))

HSP 1 Score: 79.0 bits (193), Expect = 3.100e-15
Identity = 38/83 (45.78%), Postives = 56/83 (67.47%), Query Frame = 1


		  
Query: 63  DSKVLQTFQKSFVQVQSILDQNRLLINEINQNHESRIPDNLSRNVGLIRELNNNIRRVVD 122
           D  + +   ++F QVQS+LD+NR LI ++N NH+SR+ DN+S+NV LI+ELN NI +VV+
Sbjct: 22  DPAMWENLDRNFRQVQSVLDRNRSLIQQVNDNHQSRMADNMSKNVALIQELNGNISKVVN 81

Query: 123 LYSDLSHSLTRSMEASSEGDSSG 146
           +YSDL+ S +        G   G
Sbjct: 82  MYSDLNTSFSSGFHGGKNGHDGG 104

[Close]

BLAST of Spo25307.1 vs. TAIR (Arabidopsis)
Match: AT2G29950.1 (ELF4-like 1)

HSP 1 Score: 75.9 bits (185), Expect = 2.600e-14
Identity = 40/86 (46.51%), Postives = 57/86 (66.28%), Query Frame = 1


		  
Query: 63  DSKVLQTFQKSFVQVQSILDQNRLLINEINQNHESRIPDNLSRNVGLIRELNNNIRRVVD 122
           D +V  T    F + Q  LDQNR LI  +N+NH SRIPDN+SRNVGLI E+N NI +V++
Sbjct: 34  DVEVWDTLSNGFKRAQLYLDQNRDLIQRVNENHMSRIPDNVSRNVGLINEINGNISQVME 93

Query: 123 LYSDLSHSLTRSME----ASSEGDSS 145
           +YSDLS +  +  +     + +GD++
Sbjct: 94  IYSDLSLNFAKKFDQRRRTTKDGDTT 119

The following BLAST results are available for this feature:

BLAST of Spo25307.1 vs. NCBI nr
BLAST of Spo25307.1 vs. UniProtKB/TrEMBL
BLAST of Spo25307.1 vs. ExPASy Swiss-Prot
BLAST of Spo25307.1 vs. TAIR (Arabidopsis)

BLAST of Spo25307.1 vs. NCBI nr
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. NCBI nr)
Total hits: 5


Match Name	E-value	Identity	Description
gi\|902213959\|gb\|KNA17377.1\|	2.0e-53	100.	hypothetical protein SOVF_0805...	[more]
gi\|731377917\|ref\|XP_010668016.1\|	3.8e-52	97.3	PREDICTED: protein ELF4-LIKE 4...	[more]
gi\|802628260\|ref\|XP_012077023.1\|	1.7e-47	90.2	PREDICTED: protein ELF4-LIKE 4...	[more]
gi\|1012346664\|gb\|KYP57856.1\|	8.3e-47	86.8	hypothetical protein KK1_00413...	[more]
gi\|661893296\|emb\|CDP03105.1\|	8.3e-47	88.6	unnamed protein product [Coffe...	[more]

BLAST of Spo25307.1 vs. UniProtKB/TrEMBL
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. UniprotKB/TrEMBL)
Total hits: 5


Match Name	E-value	Identity	Description
A0A0K9REU7_SPIOL	1.4e-53	100.	Uncharacterized protein OS=Spi...	[more]
C6ZKH2_BETVU	2.7e-52	97.3	ELF4-like protein OS=Beta vulg...	[more]
A0A0J8B528_BETVU	2.7e-52	97.3	Uncharacterized protein OS=Bet...	[more]
A0A067KQ00_JATCU	1.2e-47	90.2	Uncharacterized protein OS=Jat...	[more]
A0A068U3H1_COFCA	5.8e-47	88.6	Uncharacterized protein OS=Cof...	[more]

BLAST of Spo25307.1 vs. ExPASy Swiss-Prot
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. ExPASy SwissProt)
Total hits: 5


Match Name	E-value	Identity	Description
EF4L4_ARATH	5.4e-38	72.8	Protein ELF4-LIKE 4 OS=Arabido...	[more]
EF4L2_ARATH	5.0e-36	70.6	Protein ELF4-LIKE 2 OS=Arabido...	[more]
EF4L3_ARATH	8.1e-34	76.5	Protein ELF4-LIKE 3 OS=Arabido...	[more]
ELF4_ARATH	5.4e-14	45.7	Protein EARLY FLOWERING 4 OS=A...	[more]
EF4L1_ARATH	4.6e-13	46.5	Protein ELF4-LIKE 1 OS=Arabido...	[more]

BLAST of Spo25307.1 vs. TAIR (Arabidopsis)
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. TAIR)
Total hits: 5


Match Name	E-value	Identity	Description
AT1G17455.1	3.0e-39	72.8	ELF4-like 4	[more]
AT1G72630.1	2.8e-37	70.6	ELF4-like 2	[more]
AT2G06255.1	4.5e-35	76.5	ELF4-like 3	[more]
AT2G40080.1	3.1e-15	45.7	Protein of unknown function (D...	[more]
AT2G29950.1	2.6e-14	46.5	ELF4-like 1	[more]

InterPro

Analysis Name: InterPro Annotations of S. oleracea
Date Performed: 2018-06-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR009741	Protein of unknown function DUF1313	PFAM	PF07011	DUF1313	coord: 61..142 score: 4.3
None	No IPR available	PANTHER	PTHR33469	FAMILY NOT NAMED	coord: 48..161 score: 2.1
None	No IPR available	PANTHER	PTHR33469:SF3	PROTEIN ELF4-LIKE 2-RELATED	coord: 48..161 score: 2.1