Spo01409.1 (mRNA)

Overview
NameSpo01409.1
TypemRNA
OrganismSpinacia oleracea (Spinach)
DescriptionMethyl-CpG-binding domain-containing protein 10
Locationchr2 : 30056737 .. 30066019 (-)
Sequence length2017
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
ATCAATAAAACTAACAGTCAAGAAAGACAAAATATTAATCAGTTACCGCCGTCAGATCTCATTTCATCAAAATCATCTGACAGGTGTCGTCACCACAGTTACACCACCATAGATTTTTTGTCAACATCACACCACCTTATCAGTAAAATGGAGTAATAATAATAAAATTATTTTTATTTTTATTTATTTATTTTTCTAGAAATCTCAACAAACCCCACTTTCCTTTATATCCACTTTCTCTCTCCTTCTCCCTTTCTCCGATTCTTCTTCATCTGATTTTTGCAGCACAAACGGTAAGAGAGAGAACTTAGAGATTACCAATTTTATTTTACAGAAATTAGATTGAAGTCTTAATCTTTCTCTTTTTTTTTTCTTTTCAATTCCTTGTACTATTAAATTGGGATTTTTGTTCATTTTTTGGAGGAATTGATTTATGGGTATTCTTTGAATTTTGTAGGTGAAAGTTAAAAATGGTGAGTGAAGTTGAGAAGAATGCTTCTGGACAAGAGGAAGTTGTTTCAATGGAGCTCCCAGCTCCCTCTGGTTGGAAGAAACAGGTACCTTTTTATTTTTTTTCATTTTTGGTTTATTTTTCACTTCGAAAGTTTCTGCTGATGTTGATTTTTTTTCCTTCCAATTTTTGTGTGAATTGGGTTTAATTTTGGTCAAATTATGGGATTTTCTAATGTGGGATTGTGTTTACTTTTTGATTTATTGAGTTATTTGTAGGAATTTTGTTGTTGTTAGTTAGGGTTTCAATTTGGGGATTTCTAACTTATTTGGTTTGATTGGATTTGTCTATTTTTGCAAATGCTGGGAATTAGTATTTTGGAGCTAAATATTTCAAAAATCAGTTAAACTATACGGATTTTTGTCTTTTTAGGGTTTAGTGGGATGGCACTTACATTTTTTTTAATAAATTATTATTGTATTCATTTCTTGTAAACTCATTTATAATTACTGTAGTTAATAATTCATACTCTTATGTTATTATTTAATTTTCAAGTATTTCTCTTTAGTACAATGTCCAATATTTAGTGTCGTGGTATTCTTTTTGCTAAATGCTGTTTCACCGATTTAGGGATTTTGAACTATGGATACGGCAGAAAGCAGTCCGAAAATTGTGTATTGTTTTGATATGGGGCGACAGTAGCTCCATTAAAATTAGTAACATCGACAACTGATCCACAATGTAAGCTAGTGTATGGAAATAGAAGTAGAAAGAACTAATAAAGAAGTGTAAGATCCTCGCCACAGGAGAAATTTTGCATATGCATGGGGATTTTATGTGCTGTAAGGCTTGTCCTGGCTAAGTGAATCTGTTATTACATAGCCTTTTGGAGCCGTTTTGCTTTAGTACATTTTGACTTAGGAAGTTATTAAAGATTAACTAGGTTCTAAGAGAAACTTCAGTGTATGGTTGGCTTGTCTGTTAGCTTTTTAAGTCCCTAGTTTTTTATATGTTTTCTTGGTAGCATTATCATAAGAATCAAAGTCATTGATAAGACGGGCAAGAAGGACATATGAAGTGGAGAAGCTGTTAAAAAATTATGTGAAAGTGTCATTGCTAATACTCTGTATTCCTGTTTGAATCGTGATGTTGTGGGGAAGCTTATCATGTGCTTAAAATAGATATTATGATATTGAATGTAGTGTGTTTGTATAGTTTTGTGCCTTTCGGAGTGTTTTGACTGTGATTTCTTCCTTCTAGCAAAAAGCGATAGTTTCGCCTTAAGTATAGGATGTATTACGAATGGTTGATCTCTTAGAACAGTGGCATCTAATGGTGTTTGTAAGGTTTAACGTTTGAAGTTTTGTGAGGTGTTTACATGAATTTTCTCATTCAAGATACAGTAGTTATGATGGATTGAATGGGAAAAGGAAAAAATATCCATCTTTATTAAACTCTTTGTACCTAGTGCCTTTTCAATATTTTTCCCAGTAGCTTTTCTCAATGAACAATGACGAGACGAGAGGCAGTAGATGTGAATATGTGATCTGAAGTTATGAACACATTTAGTTATTAACTACGTGGTGTAGTGGTCAGTATCTAATGAATCATATATCCCAAAATAAGAATTGTGGTATTGTGGTGGAGTGGTCGGTATCAAATGATTGATGTTCTAGTTTATATTATGAGAACTCCCTTGATAACAAGACTTGGGATTGTGAATTTCTCTTTCATATCCTAACAAGGGAAATCAGATTCTTGAGAGGTATTCTTCACGAGTGAACCTGAAGGAGATGATTAATGGTTTGGCTGCATGACAATGCGATAGGTTTTCTATAAGAAACTAACTTCTGTACTGAACGGTTTTGATTAATGTCTTTGATATCTATTTGAAGCCATTTAGATTTCTAAAAGGCTTTAAAGTCCTAATACCTTTTCACTACTGCCTTTCCCTCTCCCCTCTCCCCCTGTTCTATTTCTTGGGATGGAAATAGTTTTTGCTCCTATATCCTACGTTTTAGACTTGAATCCTTGGAAGGTTCTGGTTGATAACTGACATCTGGGTAGGTCCAGCGTGATAGGAGCTAAGGTTCCTAAATTTATATTTGATACCCCCTCTCCCATCCCCAAACTCGTCCTGTTTTGTTACTTCGGCAGAAAGAGTATCTGCTTGTTGAAGGTTTTTTAATCCTGCAACTTGGTCTAGTATGTCTGTTTCTTGAGAGTAGGAAGCATCACTTCATGACCTCTTACTTCTTTGTCCCTGATCACTGCCTGTCTGGCAATTTAGTTATTCTGTGTTTGGGTTTGCTTGATTTAGCTTGGTAAGCATAATGATGTTTTAGTTGTAACGTGGAAGAGTAAGATGAGAGCAGTTTGAATTATGGAGGCAGCTTGGAATCTAGCACCTTTGAAAGCATAAGGATTTACTACGAAAGATTTGTCAAGAGAAATGTGTAAAATTAGGATAGCTGAAGAGAGTTCATACAAGTACACAACCCAGGAGTCATGGTAAACCAAACAATTTTTGTTTCATATTTCCTATGAAGTTGGGTTTACTGTTCCAGTTATTCAGTGAGACGAGGCTCCAAATATTATTATTGATTTATGGGAGCACTGATGAGGTACCTTGGTTTGTCAGATGCTGTTGGGTATATGAACCTTAGATTTGATGATAGTATCTTGGAATTTTACTGGCTCTTATACATTAATTATTCATAAACACCATCTCCCTTTCTTTAAGAGTTATCTATATCACATTCTCACCATATGTGTACATGTCTTTTTTCCATCAAGAAAGATATGCATTGCAGCAGATAAGGTTTAGTGTATTCACAAGGAAATTCTTTTGAAGTCTTGGCAACTTGGTGCTATTATGTAGAAGTCCCTTGAACTCAATGCCTGTAGTGGAGAATTGGAGATTTCATATATGACTACTAGGTGATTTCAAATGTTGAACGCAAGGTCATCGTTCATCCCATTTAGCAGTTAGAACCACAAATAAGGGTATAGGACAAATATCACTCCTAGAGGCACTATAGGGAAACCCTTTTGTTTTTATGGCTCGTTCTTGTCATGAACTGCTTAAATTTTTAGGTTGTTCGTGTATTATGTTGTTTTGCTTACCTCCATATGGGTGTATCATGAGTTTTCCCTGCTAAGTGAAGACCTGATTCTGCTGATCCTATGTATGAAGTCCTCTCAGGGAACTTTGATGACCTCAGTGCAGAGCCAAATTTAGAGTTCCCGTAAGTGCAGAATTGCAGTCCGTAGAAAGCAACATCCCCACTTTTGCTGAGTTACTGTTGAACTTTCTATGGAAACGGTTCAGATTCTGTTAAGCAAGCAGCGCATGACTTGTTTTAAGGATATTTGGTAAGTCCTTTACTTTTTACATGCCAATTTTTCGAAAGAGGCATCTATGATGGTGGTGATCACAATAGGAAGAACCAATATGTATTAGCTGTACTGCTAAGTGGAGTATACAGAAAATGCACAACCTCTTTAGTTGCTAAGTTCCCCTGCCTCTAAGTTTCCCTGTGTCTCTGGCTTGCTTAATCATTGGGATTGATGATGGATGATTAGGTTTTTGTTTCACGAACAGACATCTCATGAAAACAGACATTGCTTTTTTTTTTTTTTTTTTTTTTTTTTAATGATCAATGCATCTCAAAGCTGAATGCTTTGGATACTTTTGGGAATTTATTTTTACAAGTCCGCTTTGGGAAGTCGGAAAAGTATGTGTTAAGTTCTTCCAACGTAGTCTCTTTTTTGTGTGCTAAGGTTGGTAGTCTGGACTCTGGAGCCTTTTCTTTGCTATAAGCGGTAAACTAAATGTGGTATCTGGATTAATGCCTAATACCAAGGAAAGGGGATTTCATGGTCAACAAAGGTTACCAGGTTGAGGTCTCATGTGTCTGCAAGAAGTTGCTGACGTTTAAGGAAAACTCTTTTCACTAAGTTTTCTTTGGCCACTGTAAATATGTAACTTAAGATTTTTTGTGTTAGTTGTTGGAGATGTACTTCCTCAATGATGGGAATAAAGTTTACTGGCAAGATGATCGTTTGGCATAATCAGGCTAAACCTAGAAGCTGTAACTTTCCATAAAGCATAGTTTCCTGTGCATAAAAAACTTGCTTGGGTTGCTATGCAAGATTTTTAGTCCATCGGAGAATCATTTTTATTTCAGGAGTTCTTGCTCCTGTTCTAGTGGCTAATGTGGAAAATAGATGAATGGATTTATTGGGTTTCATAAACTGTTCTTTGGATGGAGTCATAGAGGCGCTGACTTATTAAATAAGCACGTCAGGAACGAATTTGTAGCTAGTATGATCTACTAGACATGGCATGAGAGAAACCTTTAAGAGATTTTAGATCAGCAAAAAGTGGCTGAGGAATTTTAGGAAGATCCAATGACCCAGCAGAGGATGGAAGGAAACCTAGATTTTCTTGGTTAGAGACGAGGGTATGTGGACATCAATAAGCTGGGGAGCTTAGGTATGTTTTATCTATTTCTATTGCTCTATACTTTTGGGATGCATGGAGAAATTTTTGCTGATGATTCAGTTGCTAATTTGAAAAGAAGTTTTTTGAATTTGTAAGGTGATATATATTTTCTAATGCTATTAGTTACTATACCTTATCATGGTATCCTTTTGATGAGAAATTTCATCATGGGATCCTATTTGTCATTCTAGTCAAGCTATTTTCTCTTGGATCAGTTGAAGTTGTTATATGATAAATTAAGACCCGTTATATGGAATTAAGACCTGTATCTGAAATATTGACTGTAAAATTGAGATCAACCGTCCTTTTTTGTTGGAAACAACCGTCCTGTAAAATTAAGATGGTGAAAAACACTCATTTCTTTAAACGTTGCCACACTATCTGTCACCGTATTTCCGTGTGGCGTGTTCAGTCTTACCTTAGACCAACTTCTTTTGCTTGTTGCCATTAGGCACTGGTAGTGTCTGGAGGTGCGTCTATCATTTGGCCTAGAGAATAGTTTGTGATAGATCGTTTCTGTTTGGTCGCATTTAAAACGCCCTAGTCTAAGGATGGAATTCAGCTTTTGCAACCTAGAAGTTGGACAAAATCCTATTAAGTTCTTCAGATAGTCATGATTTCCATTACTTGAAGTCTCAAGATGTATTAGCTGTTCCAAAAATGGCCAAGTGGAGGTTATTGAAGTGGTTCTACTGATATCTGTCGTGATATGGTGGTTAATGTAAACTTAGCTGCTAAGTAAAACTATGGCTGTGTTGGTAAAATCGTAGCCGGAGAAAGGACGAGCAAAAGATTGAAATTGCTGAAATGCTGGGTCCCTTGGTATGGGGAAGGGAAGGAGTTGGCTGAATTTTGAGGAATATGGCTCTCTTAGGAAAATATAATATTTTCAAGTCTCAACTCTGGAGGTTTTCCTGTCAGTGGAGGCAATCCTTTCTTCATTCTGTGGAGCTATCATATGAGATTCAGACCTCACAGTTTTGGATACTAGCTGTCTTACATAGTTACATGGGTTCATGGTTGTAGGTGATATTCATGTTGTAATAGAAATTACCTGCTCGGGATAAATCAATTGTAGTTAGGCTGAGCTCGGATTTTGGGGGCAATTGACCTAAATCAAATCAAATACTTGTAAGGCAACTGGTACTAGTCTACAACAGCTTGAGGTAGCTGCTTGGATCTCAGCTGCTTGGATCCCTTAAACAGATTTCCCTCAAATCATTGTTGAACAAGGAACTTTTGGTCTATAATTGAATAAACATCCAGATGTAATGTTTTCGTTTTCATTCTGTTAGTGATATTTTGTGGCACCTTAGTCTTCATATATTTATTTCAGAAAATTTCCTTGTTGGAACTTATGTTTTACTTACGAGTTACAACTACTACCTGAACTTCGATTTCTTCTCTGAAACCCTCTTTTTATTTTTTGGAAATAGTTCTAACTACTTTAGCAATGTTAAGTTCTGTTACTTGATATTCAGCTCCCGTTTTTCATGAGGAGACCAGCGAGATAGATTGTGGCACTCTTGTTTGATCTTTCAAAAGTACAAATAGCCTAAGATAGGTTTCCAGCCTATTAGCTAGAGAAGCAGTTGAGTTGGGTTAGAGCTTTTGTTTCTTTTACCTCCTTTCTCACTGATCCTCTGAGGTATATAAATGGGTTCTCTGAAATCCATTGGATATGCAGACGTCTTGTGGAACTCCCGAGTCTTGAATCTTGATATTTAACTTGCCATCACCCTATCCAAGCATACAACCCACCTCTATTTTGATTAATACCCCTGTCATATTTTGCAGATTTGCACATCTTAATTCATTCACGTATTAAAAAAACGGAGGTGTGTGCCAAAAGTTCAAAACAATATCTCTTGGTTGTGTAGACTTGAATCTTGTTTCTGCTATTTCCAGTTTGACCAAACACTTGTTGAGGTACATGGAAGTGATGAAACACAAGCGGTTAGCGGGTATCTTTACTTATAGCTAATAGCCTTGCAATGGGAACTCTTTAAGCCAGAATGATTCATTGCCTGGGATTAGAATTTGGTGATCCTGTTATTAAGAGTTGGGTATTTGGTTGTAGCTGTAGGTAGGTCCATTGCCTGAAAACAATTTGGAGAGACGTAGTGAACGCATCTGACTTTGCTTTGTGTTTTTAATGCTCGATTATATTAGAGATGGGTAGCCATTTTATATTCAGATGCACGATGAATCAGAAATTGTCGGTTGTATTCCTTTGATTTTTGCAGATGGTACTGATAGAATAATAGTCTTATCTAGCTTACTTAATACTTGCTTGGTTGGGTTTATTATGACCATGTATATAGTTGGGAGGACAACATCGAACGGTGGCAAAGCAACTCTAACTTGTCCATTCCGGTAGTTAGTTTTGTGTGTTTTAGAGCTAGTGTTACACCAAAATTCTAACTCGTTACAAATGCCATATAGGTATTTATTCAATACTTTAAGCACTCTTACTTTTTTCCGGTTTTCTCTCTTCCCACTTCTAATATTTTATATAGTCAACAATTCATAATCTGCTTCAAATGTAACCATGTAAGTTTGTTTGTGACAGAAGGAGTACAATTTATTGCAATAAGCTGCACTTATTTTTTCCCACTTCATGCTTGTGTGTTTAGAGAGGCTGGAGTTTTTGGTGGATTGATTTTTCTGAGTCTTGAAATATAATGAGGTTTGTTTGCAGTTCTTCCCTAAAAGAGGAGGCACACCAAGGAAGAACGAGATTGTCTTTACTTCCCCAACAGGAGAGGAGATCCACAACCAAAGACAGCTGCAACAGTACCTGAAATCACATCCTGGTGGTCCACCAGCATCTGAATTTGACTGGGGTACTGGTGAGACACCTAGAAGATCAGCTCGAATTAGCGAGAAAGTTAAATCTTCTCCTCCCACTCCTGAAAGTGACCCCCCGAAGAAAAAGAGTAGGTCGTCATCTGCTTCCAAGAAGGATAGCAAGGAGGGTGAGGTCACAGCTGAAGAAACAAAGACAGATGAGGTCACAGCTGAGGAAACAAAGACAGATGAGGTCCAGATGGATGACGCTGAAAAGATAGAGAAAGAAGAGATAAATGAGGGAGCCAAAAAAGATGTCGAGATGCAGGAAGCTGAGAAAGATGTTGCAAACGAGAACCAAGCTGAGGACAAAGGTGTGGATTCTGAGACCAAGGAGGTTGTTCCTGAGCCTGAGAGAGAGACCACAGTGGCTGTAGGTAAGGAGGAGAATGGTGTAGAAACTGAGAAGCAAGATACAAATGCAAGTGAGGGTGATAAGACCTTTGTTGAAGATGCAGAGAAGCATGCCCCACAAGAGCAAGACAGTTTGCAGGGACAGGTGAAAGAAGATGCTGAAATTCAAGATACAAAAGAAAGTGATGGAGATAAGACCACCTCTGTTGAGATTGTGGATGTAGCAGGGAAGCAGGGCCCACAGGAGCCAGCTGAGAAGCAAGATGGTTTGCAGGAACAGGTGAAAGAAGATGCTGAACAAGGCAAGAAAGTTGCAGCAGATGCAACTAGTATTCAGGATAAGGAAGCAGGGGATCCTTCTCAAGTTGGAGAAGATAATTCTAAAGCTGTGGAGCAACCACAACCTGAGAAACAAGACGGTTTGCCAGAGCAGGTGAAGCCTGAAGCTGATGTGAATAGCATTTCAAAAGACAACGGGACAGCTGCTCCAGGACTCACAGAAGAACTAAAGGGAATAGATTCCGTGGCAGGTGACATAAGCAACAAAGTATTGGAGGTGACCGAGAATGGAAGCCAGGCAGGTGAGGCTAGGTCTTGAATCTTGATCCTCGCTAATGTGGTTGTCATCTTGCTGTTGGAGTCGTCTCTTTTTGAGATTATGGAGATCTCTAAATGACTGTATTACTATTAGCGTTGTTGTTTATGGTAGATTTTGATTCGTTGTTTAGTGAAGATACCCCTGTACACAGTTGTAGATTAGGCCTCAGAGTCCTTGACATAGCCAGTGATTAGGGGGGAAATTTGTAGCTCCTACAGAGATTTGTCTGTAACGTTATGCTGTCAAATTACTGGTTCTGTTATAACTTAACAACCATTTATGTATTGTATGATACTACTCGAATATGTACTATCACATTCTTCAATTTCGTTACACAACTACTCTAATATTGTGGATCTATCAAGCCGTGTGCGGCCAACAGTTGGATCGAGGAGATAGAAATCAGTTTTTATCAGTCACATATGCTCTTCAAACTGATATATAAATTCCGAAAATGATAAATTACAACTATAGTATGACTGATGATTAGTTACAAGCAAAAAGAATGCTAGTGCTTGGCCTT

mRNA sequence

ATCAATAAAACTAACAGTCAAGAAAGACAAAATATTAATCAGTTACCGCCGTCAGATCTCATTTCATCAAAATCATCTGACAGGTGTCGTCACCACAGTTACACCACCATAGATTTTTTGTCAACATCACACCACCTTATCAGTAAAATGGAGTAATAATAATAAAATTATTTTTATTTTTATTTATTTATTTTTCTAGAAATCTCAACAAACCCCACTTTCCTTTATATCCACTTTCTCTCTCCTTCTCCCTTTCTCCGATTCTTCTTCATCTGATTTTTGCAGCACAAACGGTGAAAGTTAAAAATGGTGAGTGAAGTTGAGAAGAATGCTTCTGGACAAGAGGAAGTTGTTTCAATGGAGCTCCCAGCTCCCTCTGGTTGGAAGAAACAGTTCTTCCCTAAAAGAGGAGGCACACCAAGGAAGAACGAGATTGTCTTTACTTCCCCAACAGGAGAGGAGATCCACAACCAAAGACAGCTGCAACAGTACCTGAAATCACATCCTGGTGGTCCACCAGCATCTGAATTTGACTGGGGTACTGGTGAGACACCTAGAAGATCAGCTCGAATTAGCGAGAAAGTTAAATCTTCTCCTCCCACTCCTGAAAGTGACCCCCCGAAGAAAAAGAGTAGGTCGTCATCTGCTTCCAAGAAGGATAGCAAGGAGGGTGAGGTCACAGCTGAAGAAACAAAGACAGATGAGGTCACAGCTGAGGAAACAAAGACAGATGAGGTCCAGATGGATGACGCTGAAAAGATAGAGAAAGAAGAGATAAATGAGGGAGCCAAAAAAGATGTCGAGATGCAGGAAGCTGAGAAAGATGTTGCAAACGAGAACCAAGCTGAGGACAAAGGTGTGGATTCTGAGACCAAGGAGGTTGTTCCTGAGCCTGAGAGAGAGACCACAGTGGCTGTAGGTAAGGAGGAGAATGGTGTAGAAACTGAGAAGCAAGATACAAATGCAAGTGAGGGTGATAAGACCTTTGTTGAAGATGCAGAGAAGCATGCCCCACAAGAGCAAGACAGTTTGCAGGGACAGGTGAAAGAAGATGCTGAAATTCAAGATACAAAAGAAAGTGATGGAGATAAGACCACCTCTGTTGAGATTGTGGATGTAGCAGGGAAGCAGGGCCCACAGGAGCCAGCTGAGAAGCAAGATGGTTTGCAGGAACAGGTGAAAGAAGATGCTGAACAAGGCAAGAAAGTTGCAGCAGATGCAACTAGTATTCAGGATAAGGAAGCAGGGGATCCTTCTCAAGTTGGAGAAGATAATTCTAAAGCTGTGGAGCAACCACAACCTGAGAAACAAGACGGTTTGCCAGAGCAGGTGAAGCCTGAAGCTGATGTGAATAGCATTTCAAAAGACAACGGGACAGCTGCTCCAGGACTCACAGAAGAACTAAAGGGAATAGATTCCGTGGCAGGTGACATAAGCAACAAAGTATTGGAGGTGACCGAGAATGGAAGCCAGGCAGGTGAGGCTAGGTCTTGAATCTTGATCCTCGCTAATGTGGTTGTCATCTTGCTGTTGGAGTCGTCTCTTTTTGAGATTATGGAGATCTCTAAATGACTGTATTACTATTAGCGTTGTTGTTTATGGTAGATTTTGATTCGTTGTTTAGTGAAGATACCCCTGTACACAGTTGTAGATTAGGCCTCAGAGTCCTTGACATAGCCAGTGATTAGGGGGGAAATTTGTAGCTCCTACAGAGATTTGTCTGTAACGTTATGCTGTCAAATTACTGGTTCTGTTATAACTTAACAACCATTTATGTATTGTATGATACTACTCGAATATGTACTATCACATTCTTCAATTTCGTTACACAACTACTCTAATATTGTGGATCTATCAAGCCGTGTGCGGCCAACAGTTGGATCGAGGAGATAGAAATCAGTTTTTATCAGTCACATATGCTCTTCAAACTGATATATAAATTCCGAAAATGATAAATTACAACTATAGTATGACTGATGATTAGTTACAAGCAAAAAGAATGCTAGTGCTTGGCCTT

Coding sequence (CDS)

ATGGTGAGTGAAGTTGAGAAGAATGCTTCTGGACAAGAGGAAGTTGTTTCAATGGAGCTCCCAGCTCCCTCTGGTTGGAAGAAACAGTTCTTCCCTAAAAGAGGAGGCACACCAAGGAAGAACGAGATTGTCTTTACTTCCCCAACAGGAGAGGAGATCCACAACCAAAGACAGCTGCAACAGTACCTGAAATCACATCCTGGTGGTCCACCAGCATCTGAATTTGACTGGGGTACTGGTGAGACACCTAGAAGATCAGCTCGAATTAGCGAGAAAGTTAAATCTTCTCCTCCCACTCCTGAAAGTGACCCCCCGAAGAAAAAGAGTAGGTCGTCATCTGCTTCCAAGAAGGATAGCAAGGAGGGTGAGGTCACAGCTGAAGAAACAAAGACAGATGAGGTCACAGCTGAGGAAACAAAGACAGATGAGGTCCAGATGGATGACGCTGAAAAGATAGAGAAAGAAGAGATAAATGAGGGAGCCAAAAAAGATGTCGAGATGCAGGAAGCTGAGAAAGATGTTGCAAACGAGAACCAAGCTGAGGACAAAGGTGTGGATTCTGAGACCAAGGAGGTTGTTCCTGAGCCTGAGAGAGAGACCACAGTGGCTGTAGGTAAGGAGGAGAATGGTGTAGAAACTGAGAAGCAAGATACAAATGCAAGTGAGGGTGATAAGACCTTTGTTGAAGATGCAGAGAAGCATGCCCCACAAGAGCAAGACAGTTTGCAGGGACAGGTGAAAGAAGATGCTGAAATTCAAGATACAAAAGAAAGTGATGGAGATAAGACCACCTCTGTTGAGATTGTGGATGTAGCAGGGAAGCAGGGCCCACAGGAGCCAGCTGAGAAGCAAGATGGTTTGCAGGAACAGGTGAAAGAAGATGCTGAACAAGGCAAGAAAGTTGCAGCAGATGCAACTAGTATTCAGGATAAGGAAGCAGGGGATCCTTCTCAAGTTGGAGAAGATAATTCTAAAGCTGTGGAGCAACCACAACCTGAGAAACAAGACGGTTTGCCAGAGCAGGTGAAGCCTGAAGCTGATGTGAATAGCATTTCAAAAGACAACGGGACAGCTGCTCCAGGACTCACAGAAGAACTAAAGGGAATAGATTCCGTGGCAGGTGACATAAGCAACAAAGTATTGGAGGTGACCGAGAATGGAAGCCAGGCAGGTGAGGCTAGGTCTTGA

Protein sequence

MVSEVEKNASGQEEVVSMELPAPSGWKKQFFPKRGGTPRKNEIVFTSPTGEEIHNQRQLQQYLKSHPGGPPASEFDWGTGETPRRSARISEKVKSSPPTPESDPPKKKSRSSSASKKDSKEGEVTAEETKTDEVTAEETKTDEVQMDDAEKIEKEEINEGAKKDVEMQEAEKDVANENQAEDKGVDSETKEVVPEPERETTVAVGKEENGVETEKQDTNASEGDKTFVEDAEKHAPQEQDSLQGQVKEDAEIQDTKESDGDKTTSVEIVDVAGKQGPQEPAEKQDGLQEQVKEDAEQGKKVAADATSIQDKEAGDPSQVGEDNSKAVEQPQPEKQDGLPEQVKPEADVNSISKDNGTAAPGLTEELKGIDSVAGDISNKVLEVTENGSQAGEARS
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameType
Spo01409Spo01409gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameType
Spo01409.1Spo01409.1-proteinpolypeptide


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameType
Spo01409.1.utr5p.2Spo01409.1.utr5p.2five_prime_UTR
Spo01409.1.utr5p.1Spo01409.1.utr5p.1five_prime_UTR


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameType
Spo01409.1.CDS.2Spo01409.1.CDS.2CDS
Spo01409.1.CDS.1Spo01409.1.CDS.1CDS


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameType
Spo01409.1.utr3p.1Spo01409.1.utr3p.1three_prime_UTR


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameType
Spo01409.1.exon.3Spo01409.1.exon.3exon
Spo01409.1.exon.2Spo01409.1.exon.2exon
Spo01409.1.exon.1Spo01409.1.exon.1exon


Homology
BLAST of Spo01409.1 vs. NCBI nr
Match: gi|902196521|gb|KNA13128.1| (hypothetical protein SOVF_119560 [Spinacia oleracea])

HSP 1 Score: 716.5 bits (1848), Expect = 2.600e-203
Identity = 395/395 (100.00%), Postives = 395/395 (100.00%), Query Frame = 1

		  

Query: 1   MVSEVEKNASGQEEVVSMELPAPSGWKKQFFPKRGGTPRKNEIVFTSPTGEEIHNQRQLQ 60
           MVSEVEKNASGQEEVVSMELPAPSGWKKQFFPKRGGTPRKNEIVFTSPTGEEIHNQRQLQ
Sbjct: 1   MVSEVEKNASGQEEVVSMELPAPSGWKKQFFPKRGGTPRKNEIVFTSPTGEEIHNQRQLQ 60

Query: 61  QYLKSHPGGPPASEFDWGTGETPRRSARISEKVKSSPPTPESDPPKKKSRSSSASKKDSK 120
           QYLKSHPGGPPASEFDWGTGETPRRSARISEKVKSSPPTPESDPPKKKSRSSSASKKDSK
Sbjct: 61  QYLKSHPGGPPASEFDWGTGETPRRSARISEKVKSSPPTPESDPPKKKSRSSSASKKDSK 120

Query: 121 EGEVTAEETKTDEVTAEETKTDEVQMDDAEKIEKEEINEGAKKDVEMQEAEKDVANENQA 180
           EGEVTAEETKTDEVTAEETKTDEVQMDDAEKIEKEEINEGAKKDVEMQEAEKDVANENQA
Sbjct: 121 EGEVTAEETKTDEVTAEETKTDEVQMDDAEKIEKEEINEGAKKDVEMQEAEKDVANENQA 180

Query: 181 EDKGVDSETKEVVPEPERETTVAVGKEENGVETEKQDTNASEGDKTFVEDAEKHAPQEQD 240
           EDKGVDSETKEVVPEPERETTVAVGKEENGVETEKQDTNASEGDKTFVEDAEKHAPQEQD
Sbjct: 181 EDKGVDSETKEVVPEPERETTVAVGKEENGVETEKQDTNASEGDKTFVEDAEKHAPQEQD 240

Query: 241 SLQGQVKEDAEIQDTKESDGDKTTSVEIVDVAGKQGPQEPAEKQDGLQEQVKEDAEQGKK 300
           SLQGQVKEDAEIQDTKESDGDKTTSVEIVDVAGKQGPQEPAEKQDGLQEQVKEDAEQGKK
Sbjct: 241 SLQGQVKEDAEIQDTKESDGDKTTSVEIVDVAGKQGPQEPAEKQDGLQEQVKEDAEQGKK 300

Query: 301 VAADATSIQDKEAGDPSQVGEDNSKAVEQPQPEKQDGLPEQVKPEADVNSISKDNGTAAP 360
           VAADATSIQDKEAGDPSQVGEDNSKAVEQPQPEKQDGLPEQVKPEADVNSISKDNGTAAP
Sbjct: 301 VAADATSIQDKEAGDPSQVGEDNSKAVEQPQPEKQDGLPEQVKPEADVNSISKDNGTAAP 360

Query: 361 GLTEELKGIDSVAGDISNKVLEVTENGSQAGEARS 396
           GLTEELKGIDSVAGDISNKVLEVTENGSQAGEARS
Sbjct: 361 GLTEELKGIDSVAGDISNKVLEVTENGSQAGEARS 395

BLAST of Spo01409.1 vs. NCBI nr
Match: gi|731353239|ref|XP_010687958.1| (PREDICTED: methyl-CpG-binding domain-containing protein 11-like [Beta vulgaris subsp. vulgaris])

HSP 1 Score: 357.8 bits (917), Expect = 2.400e-95
Identity = 254/440 (57.73%), Postives = 282/440 (64.09%), Query Frame = 1

		  

Query: 1   MVSEVEKNASGQEEVVSMELPAPSGWKKQFFPKRGGTPRKNEIVFTSPTGEEIHNQRQLQ 60
           M+SEVEKN   QEEVVSMELPAPSGWKKQFFPKRGGTP+KNEIVFTSPTGEEIHNQRQLQ
Sbjct: 1   MMSEVEKNTP-QEEVVSMELPAPSGWKKQFFPKRGGTPKKNEIVFTSPTGEEIHNQRQLQ 60

Query: 61  QYLKSHPGGPPASEFDWGTGETPRRSARISEKVKSSPPTPESDPPKKKSRSSSASKKDSK 120
           QYLKSHPGGPPASEFDWGTGETPRRSARISEKVK++PPTPESDPPKK+ R SSASKKD  
Sbjct: 61  QYLKSHPGGPPASEFDWGTGETPRRSARISEKVKAAPPTPESDPPKKR-RKSSASKKDG- 120

Query: 121 EGEVTAEETKTDEVTAEETKTDEVQMDDAEKIEKEEINEGAKKDVEMQEA---------- 180
                   +K  E TAE T TDEVQM+DAEK EKEE  EGA+KDV+MQEA          
Sbjct: 121 --------SKDTEATAEGTNTDEVQMEDAEKSEKEETAEGAEKDVQMQEAEKTQKDKAEA 180

Query: 181 --EKDVANENQAEDKGVDSETKEVVPEPERETTVAVGKEENGVETEKQDTNAS----EGD 240
             EK+V  EN+AE   V SETKE VPEPERET V V + E     ++Q    S    EGD
Sbjct: 181 RDEKEVMKENRAESINVASETKEAVPEPERETAVPVPEVEGNAVFKEQYLKGSVGDKEGD 240

Query: 241 KTFVEDAE---KHAPQEQDSLQGQVKE-----DAEIQDTKESDGDKTTSVEIVDVAGKQG 300
           K  +EDAE   +  P+ +   Q  V E     + E QD KE +GDK   V+         
Sbjct: 241 KASIEDAEMTKEAVPEPERQSQVPVPEVEKNVETEKQDIKEREGDKDAEVK--------- 300

Query: 301 PQEPAEKQDGLQEQVKEDAEQGKKVAADATSIQDK---EAGDPSQ---------VGEDNS 360
                EK D LQEQVK D E GKK A+       K   E  D SQ         VGED  
Sbjct: 301 ----EEKNDSLQEQVKVDTEDGKKDASGELGYARKFEVERVDSSQLITNHEENIVGEDKF 360

Query: 361 KAVEQPQPEKQDGLPEQVKPE---------ADVNSISKDNGTAAPGLTEELKGIDSVAGD 396
           K  EQ QPEKQDG  + VKP+          DV+SI KDNG A     EE K  D V G+
Sbjct: 361 KVEEQAQPEKQDGFVDLVKPDIDATNKEAKLDVDSIGKDNGKAPLETVEEPKEKDGVEGN 416

BLAST of Spo01409.1 vs. NCBI nr
Match: gi|870850772|gb|KMT02838.1| (hypothetical protein BVRB_8g194160 isoform B [Beta vulgaris subsp. vulgaris])

HSP 1 Score: 315.8 bits (808), Expect = 1.000e-82
Identity = 230/412 (55.83%), Postives = 257/412 (62.38%), Query Frame = 1

		  

Query: 29  QFFPKRGGTPRKNEIVFTSPTGEEIHNQRQLQQYLKSHPGGPPASEFDWGTGETPRRSAR 88
           QFFPKRGGTP+KNEIVFTSPTGEEIHNQRQLQQYLKSHPGGPPASEFDWGTGETPRRSAR
Sbjct: 5   QFFPKRGGTPKKNEIVFTSPTGEEIHNQRQLQQYLKSHPGGPPASEFDWGTGETPRRSAR 64

Query: 89  ISEKVKSSPPTPESDPPKKKSRSSSASKKDSKEGEVTAEETKTDEVTAEETKTDEVQMDD 148
           ISEKVK++PPTPESDPPKK+ R SSASKKD          +K  E TAE T TDEVQM+D
Sbjct: 65  ISEKVKAAPPTPESDPPKKR-RKSSASKKDG---------SKDTEATAEGTNTDEVQMED 124

Query: 149 AEKIEKEEINEGAKKDVEMQEA------------EKDVANENQAEDKGVDSETKEVVPEP 208
           AEK EKEE  EGA+KDV+MQEA            EK+V  EN+AE   V SETKE VPEP
Sbjct: 125 AEKSEKEETAEGAEKDVQMQEAEKTQKDKAEARDEKEVMKENRAESINVASETKEAVPEP 184

Query: 209 ERETTVAVGKEENGVETEKQDTNAS----EGDKTFVEDAE---KHAPQEQDSLQGQVKE- 268
           ERET V V + E     ++Q    S    EGDK  +EDAE   +  P+ +   Q  V E 
Sbjct: 185 ERETAVPVPEVEGNAVFKEQYLKGSVGDKEGDKASIEDAEMTKEAVPEPERQSQVPVPEV 244

Query: 269 ----DAEIQDTKESDGDKTTSVEIVDVAGKQGPQEPAEKQDGLQEQVKEDAEQGKKVAAD 328
               + E QD KE +GDK   V+              EK D LQEQVK D E GKK A+ 
Sbjct: 245 EKNVETEKQDIKEREGDKDAEVK-------------EEKNDSLQEQVKVDTEDGKKDASG 304

Query: 329 ATSIQDK---EAGDPSQ---------VGEDNSKAVEQPQPEKQDGLPEQVKPE------- 388
                 K   E  D SQ         VGED  K  EQ QPEKQDG  + VKP+       
Sbjct: 305 ELGYARKFEVERVDSSQLITNHEENIVGEDKFKVEEQAQPEKQDGFVDLVKPDIDATNKE 364

Query: 389 --ADVNSISKDNGTAAPGLTEELKGIDSVAGDISNKVLEVTENGSQAGEARS 396
              DV+SI KDNG A     EE K  D V G+IS KV+EVTENGS+AGEARS
Sbjct: 365 AKLDVDSIGKDNGKAPLETVEEPKEKDGVEGNISKKVIEVTENGSKAGEARS 393

BLAST of Spo01409.1 vs. NCBI nr
Match: gi|595805048|ref|XP_007202246.1| (hypothetical protein PRUPE_ppa008789mg [Prunus persica])

HSP 1 Score: 183.7 bits (465), Expect = 6.100e-43
Identity = 146/329 (44.38%), Postives = 190/329 (57.75%), Query Frame = 1

		  

Query: 1   MVSEVEKNASGQEEVVSMELPAPSGWKKQFFPKRGGTPRKNEIVFTSPTGEEIHNQRQLQ 60
           M S VEK     EEVVS+ELPAPSGW K+F PK+ GTP+KNEI+FT+PTGEEI N+RQL+
Sbjct: 1   MASSVEKEG---EEVVSLELPAPSGWVKKFLPKQSGTPKKNEIIFTAPTGEEITNKRQLE 60

Query: 61  QYLKSHPGGPPASEFDWGTGETPRRSARISEKVKSSPPTPESDPPKKKSRSSSASKKDSK 120
           QYLK+HPGGP  SEFDW TGETPRRSARISEK K++PP PES+PPKK+SR S+++KKDSK
Sbjct: 61  QYLKAHPGGPAVSEFDWSTGETPRRSARISEKAKATPP-PESEPPKKRSRKSTSAKKDSK 120

Query: 121 EGEVTAEETKTDEVTAEETKTDEVQMDDAEKIEKEEINEGAKKDVEMQEAEKDVANENQA 180
           E +   E        AEETK  +VQ   AEK EK          VE  E EKD   +NQ 
Sbjct: 121 EKQAGPE-------GAEETKISDVQA--AEKAEK----------VEDTEMEKDDVKDNQD 180

Query: 181 EDKGVDSETKEVVPEPERETTVAVGKEEN----GVETEKQDTNASEGDKTFVEDAEKHAP 240
           E+K  D++TK  V +PE      V +E N      E +K      E  K  ++       
Sbjct: 181 EEKAPDADTKTEVAQPEE---TKVEQEANIPGDAEECKKTSKAGPEDSKASIDGGSGFGK 240

Query: 241 QEQDSLQGQVKEDAEIQDTKESDGDKTTSVEIVDVAGKQGPQEPAEKQDGLQEQVKEDAE 300
           Q +       KE+AE +  +E        V   +  G QG  + A   +   E   E+ E
Sbjct: 241 QTE-------KENAEGEKVEEKGEQPQVEVGKEEETGDQGKAKIAIVDEDKHEVEGEEKE 296

Query: 301 QGKKVAADA-TSIQDKEAGDPSQVGEDNS 325
           +  +VA +    I++KEA   +  G+++S
Sbjct: 301 KHNEVAIETEVEIEEKEAAKGNTEGKNSS 296

BLAST of Spo01409.1 vs. NCBI nr
Match: gi|1009167086|ref|XP_015901933.1| (PREDICTED: methyl-CpG-binding domain-containing protein 11-like [Ziziphus jujuba])

HSP 1 Score: 180.6 bits (457), Expect = 5.200e-42
Identity = 160/398 (40.20%), Postives = 217/398 (54.52%), Query Frame = 1

		  

Query: 1   MVSEVEKNASGQEEVVSMELPAPSGWKKQFFPKRGGTPRKNEIVFTSPTGEEIHNQRQLQ 60
           M S V K A+ +E+V S+ELPAP GWKK+F PK+GGTP+KNEI+FT+PTGEEI N+RQL+
Sbjct: 1   MASSVGKEAA-KEDVFSLELPAPPGWKKKFLPKQGGTPKKNEIIFTAPTGEEISNRRQLE 60

Query: 61  QYLKSHPGGPPASEFDWGTGETPRRSARISEKVKSSPPTPESDPPKKKSRSSSASKKDSK 120
           QYLK+HPGGP  SEFDWGTGETPRRSARISEK K++ PTPES+PPKK+SR SSASKKD K
Sbjct: 61  QYLKAHPGGPAVSEFDWGTGETPRRSARISEKAKAT-PTPESEPPKKRSRKSSASKKDGK 120

Query: 121 EGEVTAEETKTDEVTAEETKTDEVQMDDAEKIEKEEINEGAKKDVEMQEAEKDVANENQA 180
           E E  +  T       EE+K  ++Q D           +  +KD E  +A+KDV  ENQ 
Sbjct: 121 EKEAASGGT-------EESKVTDIQED-----------QKTEKDSEDADAKKDVVKENQ- 180

Query: 181 EDKGVDSETK-EVVPEPERETTVAVGKEENGVETEKQDTNASEGDKTFVEDAEKHAPQEQ 240
           ++K  D+ TK E  P  E     A GKE +                    ++EK    EQ
Sbjct: 181 DEKAQDAGTKIEAAPAGE----AAAGKESD-----------------LPNNSEKATESEQ 240

Query: 241 DSLQG-QVKEDAEIQDTKESDGDKTTSVEIVDVAGKQGPQEPAEKQDGLQEQVKEDAEQG 300
            + +G  V +  E+    +++   T + ++ +   +Q  Q+  EK     EQ+K D    
Sbjct: 241 GNSEGITVGKKVEVSGIIQNESGNTEAAKLPEKVEQQ--QDETEKNIVAGEQIKVDTNAD 300

Query: 301 KKVAADATSIQDKEAGDPSQV---GEDNSKAVEQPQPEKQDGLPEQVKPEADVNSISKDN 360
           KK   + T  ++KE  +       GE N K     +  + +G   +VK +       + N
Sbjct: 301 KK--RNETEGEEKEKYEKKATESEGEINEKEKHDIKATESEG---EVKEKESAKGNEEHN 335

Query: 361 GTAAPGLTEELKGIDSVAGDISNKVLEVTENGSQAGEA 394
            T          GI     + S KV EV+ENG+   EA
Sbjct: 361 NT----------GIH----EASKKVEEVSENGNHGNEA 335

BLAST of Spo01409.1 vs. UniProtKB/TrEMBL
Match: A0A0K9R0V4_SPIOL (Uncharacterized protein OS=Spinacia oleracea GN=SOVF_119560 PE=4 SV=1)

HSP 1 Score: 716.5 bits (1848), Expect = 1.800e-203
Identity = 395/395 (100.00%), Postives = 395/395 (100.00%), Query Frame = 1

		  

Query: 1   MVSEVEKNASGQEEVVSMELPAPSGWKKQFFPKRGGTPRKNEIVFTSPTGEEIHNQRQLQ 60
           MVSEVEKNASGQEEVVSMELPAPSGWKKQFFPKRGGTPRKNEIVFTSPTGEEIHNQRQLQ
Sbjct: 1   MVSEVEKNASGQEEVVSMELPAPSGWKKQFFPKRGGTPRKNEIVFTSPTGEEIHNQRQLQ 60

Query: 61  QYLKSHPGGPPASEFDWGTGETPRRSARISEKVKSSPPTPESDPPKKKSRSSSASKKDSK 120
           QYLKSHPGGPPASEFDWGTGETPRRSARISEKVKSSPPTPESDPPKKKSRSSSASKKDSK
Sbjct: 61  QYLKSHPGGPPASEFDWGTGETPRRSARISEKVKSSPPTPESDPPKKKSRSSSASKKDSK 120

Query: 121 EGEVTAEETKTDEVTAEETKTDEVQMDDAEKIEKEEINEGAKKDVEMQEAEKDVANENQA 180
           EGEVTAEETKTDEVTAEETKTDEVQMDDAEKIEKEEINEGAKKDVEMQEAEKDVANENQA
Sbjct: 121 EGEVTAEETKTDEVTAEETKTDEVQMDDAEKIEKEEINEGAKKDVEMQEAEKDVANENQA 180

Query: 181 EDKGVDSETKEVVPEPERETTVAVGKEENGVETEKQDTNASEGDKTFVEDAEKHAPQEQD 240
           EDKGVDSETKEVVPEPERETTVAVGKEENGVETEKQDTNASEGDKTFVEDAEKHAPQEQD
Sbjct: 181 EDKGVDSETKEVVPEPERETTVAVGKEENGVETEKQDTNASEGDKTFVEDAEKHAPQEQD 240

Query: 241 SLQGQVKEDAEIQDTKESDGDKTTSVEIVDVAGKQGPQEPAEKQDGLQEQVKEDAEQGKK 300
           SLQGQVKEDAEIQDTKESDGDKTTSVEIVDVAGKQGPQEPAEKQDGLQEQVKEDAEQGKK
Sbjct: 241 SLQGQVKEDAEIQDTKESDGDKTTSVEIVDVAGKQGPQEPAEKQDGLQEQVKEDAEQGKK 300

Query: 301 VAADATSIQDKEAGDPSQVGEDNSKAVEQPQPEKQDGLPEQVKPEADVNSISKDNGTAAP 360
           VAADATSIQDKEAGDPSQVGEDNSKAVEQPQPEKQDGLPEQVKPEADVNSISKDNGTAAP
Sbjct: 301 VAADATSIQDKEAGDPSQVGEDNSKAVEQPQPEKQDGLPEQVKPEADVNSISKDNGTAAP 360

Query: 361 GLTEELKGIDSVAGDISNKVLEVTENGSQAGEARS 396
           GLTEELKGIDSVAGDISNKVLEVTENGSQAGEARS
Sbjct: 361 GLTEELKGIDSVAGDISNKVLEVTENGSQAGEARS 395

BLAST of Spo01409.1 vs. UniProtKB/TrEMBL
Match: A0A0J8BNH7_BETVU (Uncharacterized protein OS=Beta vulgaris subsp. vulgaris GN=BVRB_8g194160 PE=4 SV=1)

HSP 1 Score: 357.8 bits (917), Expect = 1.700e-95
Identity = 254/440 (57.73%), Postives = 282/440 (64.09%), Query Frame = 1

		  

Query: 1   MVSEVEKNASGQEEVVSMELPAPSGWKKQFFPKRGGTPRKNEIVFTSPTGEEIHNQRQLQ 60
           M+SEVEKN   QEEVVSMELPAPSGWKKQFFPKRGGTP+KNEIVFTSPTGEEIHNQRQLQ
Sbjct: 1   MMSEVEKNTP-QEEVVSMELPAPSGWKKQFFPKRGGTPKKNEIVFTSPTGEEIHNQRQLQ 60

Query: 61  QYLKSHPGGPPASEFDWGTGETPRRSARISEKVKSSPPTPESDPPKKKSRSSSASKKDSK 120
           QYLKSHPGGPPASEFDWGTGETPRRSARISEKVK++PPTPESDPPKK+ R SSASKKD  
Sbjct: 61  QYLKSHPGGPPASEFDWGTGETPRRSARISEKVKAAPPTPESDPPKKR-RKSSASKKDG- 120

Query: 121 EGEVTAEETKTDEVTAEETKTDEVQMDDAEKIEKEEINEGAKKDVEMQEA---------- 180
                   +K  E TAE T TDEVQM+DAEK EKEE  EGA+KDV+MQEA          
Sbjct: 121 --------SKDTEATAEGTNTDEVQMEDAEKSEKEETAEGAEKDVQMQEAEKTQKDKAEA 180

Query: 181 --EKDVANENQAEDKGVDSETKEVVPEPERETTVAVGKEENGVETEKQDTNAS----EGD 240
             EK+V  EN+AE   V SETKE VPEPERET V V + E     ++Q    S    EGD
Sbjct: 181 RDEKEVMKENRAESINVASETKEAVPEPERETAVPVPEVEGNAVFKEQYLKGSVGDKEGD 240

Query: 241 KTFVEDAE---KHAPQEQDSLQGQVKE-----DAEIQDTKESDGDKTTSVEIVDVAGKQG 300
           K  +EDAE   +  P+ +   Q  V E     + E QD KE +GDK   V+         
Sbjct: 241 KASIEDAEMTKEAVPEPERQSQVPVPEVEKNVETEKQDIKEREGDKDAEVK--------- 300

Query: 301 PQEPAEKQDGLQEQVKEDAEQGKKVAADATSIQDK---EAGDPSQ---------VGEDNS 360
                EK D LQEQVK D E GKK A+       K   E  D SQ         VGED  
Sbjct: 301 ----EEKNDSLQEQVKVDTEDGKKDASGELGYARKFEVERVDSSQLITNHEENIVGEDKF 360

Query: 361 KAVEQPQPEKQDGLPEQVKPE---------ADVNSISKDNGTAAPGLTEELKGIDSVAGD 396
           K  EQ QPEKQDG  + VKP+          DV+SI KDNG A     EE K  D V G+
Sbjct: 361 KVEEQAQPEKQDGFVDLVKPDIDATNKEAKLDVDSIGKDNGKAPLETVEEPKEKDGVEGN 416

BLAST of Spo01409.1 vs. UniProtKB/TrEMBL
Match: A0A0J8BSF7_BETVU (Uncharacterized protein OS=Beta vulgaris subsp. vulgaris GN=BVRB_8g194160 PE=4 SV=1)

HSP 1 Score: 315.8 bits (808), Expect = 7.200e-83
Identity = 230/412 (55.83%), Postives = 257/412 (62.38%), Query Frame = 1

		  

Query: 29  QFFPKRGGTPRKNEIVFTSPTGEEIHNQRQLQQYLKSHPGGPPASEFDWGTGETPRRSAR 88
           QFFPKRGGTP+KNEIVFTSPTGEEIHNQRQLQQYLKSHPGGPPASEFDWGTGETPRRSAR
Sbjct: 5   QFFPKRGGTPKKNEIVFTSPTGEEIHNQRQLQQYLKSHPGGPPASEFDWGTGETPRRSAR 64

Query: 89  ISEKVKSSPPTPESDPPKKKSRSSSASKKDSKEGEVTAEETKTDEVTAEETKTDEVQMDD 148
           ISEKVK++PPTPESDPPKK+ R SSASKKD          +K  E TAE T TDEVQM+D
Sbjct: 65  ISEKVKAAPPTPESDPPKKR-RKSSASKKDG---------SKDTEATAEGTNTDEVQMED 124

Query: 149 AEKIEKEEINEGAKKDVEMQEA------------EKDVANENQAEDKGVDSETKEVVPEP 208
           AEK EKEE  EGA+KDV+MQEA            EK+V  EN+AE   V SETKE VPEP
Sbjct: 125 AEKSEKEETAEGAEKDVQMQEAEKTQKDKAEARDEKEVMKENRAESINVASETKEAVPEP 184

Query: 209 ERETTVAVGKEENGVETEKQDTNAS----EGDKTFVEDAE---KHAPQEQDSLQGQVKE- 268
           ERET V V + E     ++Q    S    EGDK  +EDAE   +  P+ +   Q  V E 
Sbjct: 185 ERETAVPVPEVEGNAVFKEQYLKGSVGDKEGDKASIEDAEMTKEAVPEPERQSQVPVPEV 244

Query: 269 ----DAEIQDTKESDGDKTTSVEIVDVAGKQGPQEPAEKQDGLQEQVKEDAEQGKKVAAD 328
               + E QD KE +GDK   V+              EK D LQEQVK D E GKK A+ 
Sbjct: 245 EKNVETEKQDIKEREGDKDAEVK-------------EEKNDSLQEQVKVDTEDGKKDASG 304

Query: 329 ATSIQDK---EAGDPSQ---------VGEDNSKAVEQPQPEKQDGLPEQVKPE------- 388
                 K   E  D SQ         VGED  K  EQ QPEKQDG  + VKP+       
Sbjct: 305 ELGYARKFEVERVDSSQLITNHEENIVGEDKFKVEEQAQPEKQDGFVDLVKPDIDATNKE 364

Query: 389 --ADVNSISKDNGTAAPGLTEELKGIDSVAGDISNKVLEVTENGSQAGEARS 396
              DV+SI KDNG A     EE K  D V G+IS KV+EVTENGS+AGEARS
Sbjct: 365 AKLDVDSIGKDNGKAPLETVEEPKEKDGVEGNISKKVIEVTENGSKAGEARS 393

BLAST of Spo01409.1 vs. UniProtKB/TrEMBL
Match: M5W9H0_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa008789mg PE=4 SV=1)

HSP 1 Score: 183.7 bits (465), Expect = 4.300e-43
Identity = 146/329 (44.38%), Postives = 190/329 (57.75%), Query Frame = 1

		  

Query: 1   MVSEVEKNASGQEEVVSMELPAPSGWKKQFFPKRGGTPRKNEIVFTSPTGEEIHNQRQLQ 60
           M S VEK     EEVVS+ELPAPSGW K+F PK+ GTP+KNEI+FT+PTGEEI N+RQL+
Sbjct: 1   MASSVEKEG---EEVVSLELPAPSGWVKKFLPKQSGTPKKNEIIFTAPTGEEITNKRQLE 60

Query: 61  QYLKSHPGGPPASEFDWGTGETPRRSARISEKVKSSPPTPESDPPKKKSRSSSASKKDSK 120
           QYLK+HPGGP  SEFDW TGETPRRSARISEK K++PP PES+PPKK+SR S+++KKDSK
Sbjct: 61  QYLKAHPGGPAVSEFDWSTGETPRRSARISEKAKATPP-PESEPPKKRSRKSTSAKKDSK 120

Query: 121 EGEVTAEETKTDEVTAEETKTDEVQMDDAEKIEKEEINEGAKKDVEMQEAEKDVANENQA 180
           E +   E        AEETK  +VQ   AEK EK          VE  E EKD   +NQ 
Sbjct: 121 EKQAGPE-------GAEETKISDVQA--AEKAEK----------VEDTEMEKDDVKDNQD 180

Query: 181 EDKGVDSETKEVVPEPERETTVAVGKEEN----GVETEKQDTNASEGDKTFVEDAEKHAP 240
           E+K  D++TK  V +PE      V +E N      E +K      E  K  ++       
Sbjct: 181 EEKAPDADTKTEVAQPEE---TKVEQEANIPGDAEECKKTSKAGPEDSKASIDGGSGFGK 240

Query: 241 QEQDSLQGQVKEDAEIQDTKESDGDKTTSVEIVDVAGKQGPQEPAEKQDGLQEQVKEDAE 300
           Q +       KE+AE +  +E        V   +  G QG  + A   +   E   E+ E
Sbjct: 241 QTE-------KENAEGEKVEEKGEQPQVEVGKEEETGDQGKAKIAIVDEDKHEVEGEEKE 296

Query: 301 QGKKVAADA-TSIQDKEAGDPSQVGEDNS 325
           +  +VA +    I++KEA   +  G+++S
Sbjct: 301 KHNEVAIETEVEIEEKEAAKGNTEGKNSS 296

BLAST of Spo01409.1 vs. UniProtKB/TrEMBL
Match: W9RA09_9ROSA (Methyl-CpG-binding domain-containing protein 10 OS=Morus notabilis GN=L484_006426 PE=4 SV=1)

HSP 1 Score: 170.2 bits (430), Expect = 4.900e-39
Identity = 140/335 (41.79%), Postives = 195/335 (58.21%), Query Frame = 1

		  

Query: 1   MVSEVEKNASGQEEVVSMELPAPSGWKKQFFPKRGGTPRKNEIVFTSPTGEEIHNQRQLQ 60
           M S VEK  S  EEVVS+ELPAP GWKK+F PK+GGTP+KNEI+FT+PTGEEI N++QL+
Sbjct: 13  MASSVEKE-SANEEVVSLELPAPPGWKKKFLPKQGGTPKKNEIIFTAPTGEEISNRKQLE 72

Query: 61  QYLKSHPGGPPASEFDWGTGETPRRSARISEKVKSSPPTPESDPPKKKSRSSSASKKDSK 120
           QYLK+HPGGP AS+FDWGTGETPRRSARISEK K++ P  ES+PPKK+SR +SASK+D+K
Sbjct: 73  QYLKAHPGGPAASDFDWGTGETPRRSARISEKTKAAHPR-ESEPPKKRSRKTSASKQDNK 132

Query: 121 EGEVTAEETKTDEVTAEETKTDEVQMDDAEKIEKEEINEGAKKDVEMQEAEKDVANENQA 180
           + +   E T       +ETK D+ Q  D +K EK+  ++         E +KD   ENQ 
Sbjct: 133 DKDPAPEGT-------QETKVDDTQ--DDQKTEKDGAHD---------ETKKDDVKENQD 192

Query: 181 EDKGVDSETKEVVPEPERETTVAVGKEEN-GVETEKQDTNASEGDKTFVEDAEKHAPQEQ 240
           E+K           E        VGKE     + EK+ T A EG+        K A  E+
Sbjct: 193 ENK----------TEATAAGETGVGKESQLPNDAEKKTTEAGEGNL-------KDASPEK 252

Query: 241 DSLQGQVKEDAEIQDTKESDGDKTTSVEIVDVAGKQG--PQEPAEKQDGLQEQVKEDAEQ 300
           D +   + ++           +K TS E  +V G++G  P+E  +      ++ K + E+
Sbjct: 253 DVVGSGITQN-----------EKETSNEKPEVGGEKGVVPREQGKTDIASADEKKYEVEE 299

Query: 301 GKKVAADATSIQDKEAGDPSQVG-EDNSKAVEQPQ 332
            +K+  + T  + +  G  +  G E+++K  E  Q
Sbjct: 313 KEKIDRNGTGSKGQPKGKEAAGGNEEHTKVGEAAQ 299

BLAST of Spo01409.1 vs. ExPASy Swiss-Prot
Match: MBD10_ARATH (Methyl-CpG-binding domain-containing protein 10 OS=Arabidopsis thaliana GN=MBD10 PE=1 SV=1)

HSP 1 Score: 142.1 bits (357), Expect = 1.300e-32
Identity = 130/357 (36.41%), Postives = 193/357 (54.06%), Query Frame = 1

		  

Query: 13  EEVVSMELPAPSGWKKQFFPKRGGTPRKNEIVFTSPTGEEIHNQRQLQQYLKSHPGGPPA 72
           +E+VS+ELPAP+ WKK F+PKR GTPRK EIVF +PTGEEI +++QL+QYLK+HPG P  
Sbjct: 5   DELVSIELPAPASWKKLFYPKRAGTPRKTEIVFVAPTGEEISSRKQLEQYLKAHPGNPVI 64

Query: 73  SEFDWGTGETPRRSARISEKVKSSPPTPESDPPKKKSRSSSASKKDSKEGEVTAEETKTD 132
           SEF+W TGETPRRS+RIS+KVK++ PTP+ +P  KK RSS  +KKD+KE           
Sbjct: 65  SEFEWTTGETPRRSSRISQKVKATTPTPDKEPLLKKRRSS-LTKKDNKEA---------- 124

Query: 133 EVTAEETKTDEVQMDDAEKIEKEEINEGAKKDVEMQEAEKDVANENQAEDKGVDSETKEV 192
                           AEK E+  + E         + +KD   EN   +K  + E    
Sbjct: 125 ----------------AEKNEEAAVKEN-------MDVDKDGKTENAEAEKEKEKEGVTE 184

Query: 193 VPEPERETTVAVGKEENGVETEKQDTNASEGDKTFVEDAEKHAPQEQDSLQGQVKEDAEI 252
           + E E+E       E   V  E + T A +  +T + +AEK   +E +  + + KE   +
Sbjct: 185 IAEAEKENNEGEKTEAEKVNKEGEKTEAGKEGQTEIAEAEKE--KEGEKAEAENKEAEVV 244

Query: 253 QDTKESDGDKTTSVEIVDVAGKQGPQEPAEKQDGLQ-------EQVKEDAEQGKKVAADA 312
           +D KES    T+ +E    +G +G +EP+ K +GL+       ++V  +A+  KK A + 
Sbjct: 245 RDKKESMEVDTSELEKKAGSG-EGAEEPS-KVEGLKDTEMKEAQEVVTEADVEKKPAEEK 304

Query: 313 T----SIQDKEAGDPS-QVGEDNSKAVEQPQPEKQDGLPEQVKPEADVNSISKDNGT 358
           T    S+  +  G+ +  +GE N  A  +    K+    ++   EA+ N   K+N T
Sbjct: 305 TENKGSVTTEANGEQNVTLGEPNLDADAEADKGKESKEYDEKTTEAEAN---KENDT 320

BLAST of Spo01409.1 vs. ExPASy Swiss-Prot
Match: MBD11_ARATH (Methyl-CpG-binding domain-containing protein 11 OS=Arabidopsis thaliana GN=MBD11 PE=1 SV=1)

HSP 1 Score: 127.1 bits (318), Expect = 4.300e-28
Identity = 98/260 (37.69%), Postives = 146/260 (56.15%), Query Frame = 1

		  

Query: 11  GQEEVVSMELPAPSGWKKQFFPKRGGTPRKNEIVFTSPTGEEIHNQRQLQQYLKSHPGGP 70
           G+EEVVS+ELPAPS WKK F+P + G+ +K E+VF +PTGEEI N++QL+QYLKSHPG P
Sbjct: 3   GEEEVVSVELPAPSSWKKLFYPNKVGSVKKTEVVFVAPTGEEISNRKQLEQYLKSHPGNP 62

Query: 71  PASEFDWGTGETPRRSARISEKVKSSPPTPESDPPKKKSRSSSASKKDSKEGEVTAEETK 130
             +EFDW T  TPRRSARISEK K++ P+P+ +PPKK+ R+ S   K   EGE      K
Sbjct: 63  AIAEFDWTTSGTPRRSARISEKTKAT-PSPDKEPPKKRGRTKSPVSKKDAEGE------K 122

Query: 131 TDEVTAEETKTDEVQMDDAEKIEKEEINEGAKKDVEMQEAEKDVANENQAEDKGVDSETK 190
           ++    E +   + +M+  E I + E       +V  +    +    N A++  V  ET 
Sbjct: 123 SEGGGEENSHVKDTEMNPPEGIAENE-------NVTDKNGSGETERVNDAKENIVAEETP 182

Query: 191 EVVPEPERETTVAV----GKEENGVETEKQ-DTNASEGDKTFVEDAEKHAPQEQDSLQGQ 250
              P  E   ++        ++   ET+K+ DT + E +   VE     A  E+ + + +
Sbjct: 183 NAAPVQEEGESMKEKALDSVDDKSKETDKEKDTGSIEKNSVDVEKKTVEASDEKKNSEAE 242

Query: 251 VKEDAEIQDTKESDGDKTTS 266
            +   E   T E++G + T+
Sbjct: 243 TRNHEENGLTTEAEGKEKTA 248

BLAST of Spo01409.1 vs. TAIR (Arabidopsis)
Match: AT1G15340.1 (methyl-CPG-binding domain 10)

HSP 1 Score: 142.1 bits (357), Expect = 7.200e-34
Identity = 130/357 (36.41%), Postives = 193/357 (54.06%), Query Frame = 1

		  

Query: 13  EEVVSMELPAPSGWKKQFFPKRGGTPRKNEIVFTSPTGEEIHNQRQLQQYLKSHPGGPPA 72
           +E+VS+ELPAP+ WKK F+PKR GTPRK EIVF +PTGEEI +++QL+QYLK+HPG P  
Sbjct: 5   DELVSIELPAPASWKKLFYPKRAGTPRKTEIVFVAPTGEEISSRKQLEQYLKAHPGNPVI 64

Query: 73  SEFDWGTGETPRRSARISEKVKSSPPTPESDPPKKKSRSSSASKKDSKEGEVTAEETKTD 132
           SEF+W TGETPRRS+RIS+KVK++ PTP+ +P  KK RSS  +KKD+KE           
Sbjct: 65  SEFEWTTGETPRRSSRISQKVKATTPTPDKEPLLKKRRSS-LTKKDNKEA---------- 124

Query: 133 EVTAEETKTDEVQMDDAEKIEKEEINEGAKKDVEMQEAEKDVANENQAEDKGVDSETKEV 192
                           AEK E+  + E         + +KD   EN   +K  + E    
Sbjct: 125 ----------------AEKNEEAAVKEN-------MDVDKDGKTENAEAEKEKEKEGVTE 184

Query: 193 VPEPERETTVAVGKEENGVETEKQDTNASEGDKTFVEDAEKHAPQEQDSLQGQVKEDAEI 252
           + E E+E       E   V  E + T A +  +T + +AEK   +E +  + + KE   +
Sbjct: 185 IAEAEKENNEGEKTEAEKVNKEGEKTEAGKEGQTEIAEAEKE--KEGEKAEAENKEAEVV 244

Query: 253 QDTKESDGDKTTSVEIVDVAGKQGPQEPAEKQDGLQ-------EQVKEDAEQGKKVAADA 312
           +D KES    T+ +E    +G +G +EP+ K +GL+       ++V  +A+  KK A + 
Sbjct: 245 RDKKESMEVDTSELEKKAGSG-EGAEEPS-KVEGLKDTEMKEAQEVVTEADVEKKPAEEK 304

Query: 313 T----SIQDKEAGDPS-QVGEDNSKAVEQPQPEKQDGLPEQVKPEADVNSISKDNGT 358
           T    S+  +  G+ +  +GE N  A  +    K+    ++   EA+ N   K+N T
Sbjct: 305 TENKGSVTTEANGEQNVTLGEPNLDADAEADKGKESKEYDEKTTEAEAN---KENDT 320

BLAST of Spo01409.1 vs. TAIR (Arabidopsis)
Match: AT3G15790.1 (methyl-CPG-binding domain 11)

HSP 1 Score: 127.1 bits (318), Expect = 2.400e-29
Identity = 98/260 (37.69%), Postives = 146/260 (56.15%), Query Frame = 1

		  

Query: 11  GQEEVVSMELPAPSGWKKQFFPKRGGTPRKNEIVFTSPTGEEIHNQRQLQQYLKSHPGGP 70
           G+EEVVS+ELPAPS WKK F+P + G+ +K E+VF +PTGEEI N++QL+QYLKSHPG P
Sbjct: 3   GEEEVVSVELPAPSSWKKLFYPNKVGSVKKTEVVFVAPTGEEISNRKQLEQYLKSHPGNP 62

Query: 71  PASEFDWGTGETPRRSARISEKVKSSPPTPESDPPKKKSRSSSASKKDSKEGEVTAEETK 130
             +EFDW T  TPRRSARISEK K++ P+P+ +PPKK+ R+ S   K   EGE      K
Sbjct: 63  AIAEFDWTTSGTPRRSARISEKTKAT-PSPDKEPPKKRGRTKSPVSKKDAEGE------K 122

Query: 131 TDEVTAEETKTDEVQMDDAEKIEKEEINEGAKKDVEMQEAEKDVANENQAEDKGVDSETK 190
           ++    E +   + +M+  E I + E       +V  +    +    N A++  V  ET 
Sbjct: 123 SEGGGEENSHVKDTEMNPPEGIAENE-------NVTDKNGSGETERVNDAKENIVAEETP 182

Query: 191 EVVPEPERETTVAV----GKEENGVETEKQ-DTNASEGDKTFVEDAEKHAPQEQDSLQGQ 250
              P  E   ++        ++   ET+K+ DT + E +   VE     A  E+ + + +
Sbjct: 183 NAAPVQEEGESMKEKALDSVDDKSKETDKEKDTGSIEKNSVDVEKKTVEASDEKKNSEAE 242

Query: 251 VKEDAEIQDTKESDGDKTTS 266
            +   E   T E++G + T+
Sbjct: 243 TRNHEENGLTTEAEGKEKTA 248

The following BLAST results are available for this feature:
BLAST of Spo01409.1 vs. NCBI nr
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. NCBI nr)
Total hits: 5
Match NameE-valueIdentityDescription
gi|902196521|gb|KNA13128.1|2.6e-203100.hypothetical protein SOVF_1195... [more]
gi|731353239|ref|XP_010687958.1|2.4e-9557.7PREDICTED: methyl-CpG-binding ... [more]
gi|870850772|gb|KMT02838.1|1.0e-8255.8hypothetical protein BVRB_8g19... [more]
gi|595805048|ref|XP_007202246.1|6.1e-4344.3hypothetical protein PRUPE_ppa... [more]
gi|1009167086|ref|XP_015901933.1|5.2e-4240.2PREDICTED: methyl-CpG-binding ... [more]
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BLAST of Spo01409.1 vs. UniProtKB/TrEMBL
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. UniprotKB/TrEMBL)
Total hits: 5
Match NameE-valueIdentityDescription
A0A0K9R0V4_SPIOL1.8e-203100.Uncharacterized protein OS=Spi... [more]
A0A0J8BNH7_BETVU1.7e-9557.7Uncharacterized protein OS=Bet... [more]
A0A0J8BSF7_BETVU7.2e-8355.8Uncharacterized protein OS=Bet... [more]
M5W9H0_PRUPE4.3e-4344.3Uncharacterized protein OS=Pru... [more]
W9RA09_9ROSA4.9e-3941.7Methyl-CpG-binding domain-cont... [more]
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BLAST of Spo01409.1 vs. ExPASy Swiss-Prot
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. ExPASy SwissProt)
Total hits: 2
Match NameE-valueIdentityDescription
MBD10_ARATH1.3e-3236.4Methyl-CpG-binding domain-cont... [more]
MBD11_ARATH4.3e-2837.6Methyl-CpG-binding domain-cont... [more]
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BLAST of Spo01409.1 vs. TAIR (Arabidopsis)
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. TAIR)
Total hits: 2
Match NameE-valueIdentityDescription
AT1G15340.17.2e-3436.4methyl-CPG-binding domain 10[more]
AT3G15790.12.4e-2937.6methyl-CPG-binding domain 11[more]
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InterPro
Analysis Name: InterPro Annotations of S. oleracea
Date Performed: 2018-06-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001739Methyl-CpG DNA bindingGENE3D3.30.890.10coord: 12..112
score: 5.6
IPR001739Methyl-CpG DNA bindingPFAMPF01429MBDcoord: 17..79
score: 3.
IPR001739Methyl-CpG DNA bindingPROFILEPS50982MBDcoord: 12..82
score: 1
IPR016177DNA-binding domainunknownSSF54171DNA-binding domaincoord: 8..106
score: 1.44
NoneNo IPR availableunknownCoilCoilcoord: 158..178
scor
NoneNo IPR availablePANTHERPTHR33729FAMILY NOT NAMEDcoord: 1..199
score: 1.1

GO Annotation
GO Assignments
This mRNA is annotated with the following GO terms.
Category Term Accession Term Name
cellular_component GO:0005634 nucleus
molecular_function GO:0003677 DNA binding