Spo20571.1 (mRNA) | SpinachBase

Overview


Name	Spo20571.1
Type	mRNA
Organism	Spinacia oleracea (Spinach)
Description	Sigma factor sigb regulation rsbq-like protein
Location	chr2 : 44634643 .. 44638660 (-)
Sequence length	1378

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

GACCAATCAGCATGGCAAAGAATCCTACCTTATTTTACTCCGTACTACCGTGTCATACTCTATGACTTGGCCTGTGCTGGGAGTGTCAACCCTGACTTCTTCGACTTCCATCGATACACCACCCTCGACGCCTACGTCGACGACCTCCTCGACATCCTCGACGCGCTCGCTGTCACGCGTTGCGCGTATGTTGGCCATTCTGTTTCAGCTATGATCGGCCTTCTTGCTTCTATACGTCGTCGTGATCTTTTCTCTAAGCAAATACTTGTTGGTGCTTCTCCTAGGTAATTACTCTACTCTTTTTTTTTTGTTTTTTTTGTTTTTTTTAATGAAGCTGCAAAGACAATATAAATTATAAGTGGATATTATCTTACATTTGTTATCGATCAGTTTTAATCACTAATCGTTACAAATTATAATGATGTCGTAAAGACAATACAAATTTATACCATTATCTTACATTTGTTATCGATCAGTTTTAAGCCAATATTTCATTGATTTTCTAATTTTCTATTAGGTGCTCTAAAAATCTTCCGAATCTTTTAATGTACAATTTGCGTATCAACTGCGTGCCATTATTTATTTTTGTAATTTTTAGGGAAAATGTTGCGTGTCACTTCGTTATGCTTCGTATTAGACTGTTGCTATTCTTGTTCCACCACTTTTTATTTTAAAACTAGTTTTTGGACTCGGAAGATGCACCGGGTTACTAAATTAATAACATTTATATTTACTATTTATTTTTTTGCAATGATAACATGAAACATCTAATAGCTTAGTGGTAAAGACTTAAACGCCTTTTAATATAGTATAGATTTAAAATCAACTTGTTTTTAACCCGGTTTTCTTGCTTAAAAATTTAGTTATATTGTTTATGTGGTACGGAGTACAATAGATAGTACGTAGTAGATGATAAGGAAATTTTGAAACAATAATAGAGGAAGTATTTGGAATGCGATAAAATTGAAATTGGAATTTTAAAATAAATAATTAAAATTAATTGCATGGGAAAATAAATCTAGGAGAAGAAAAAAAAAGATAGGTAAAGAGGAATTAATTTATAATTTTATCACAATTTTAATTATACACTCGCTTGCAAAGTATTTTCCTTACATCTGGATAAATATTAGTTGAACACGTAATAAACTCAGAGAAGGATTTCAATATACACATACACGCAAGCATACTACTCCCTCCTTTTCTTTTTGATGTATCCATTTAAGAAAGTAGAGAGTTTTTAAGAAAATTGGAATCTTGGTTTGTATTGGTATAAGTGTAATGATTGGATGTAAGAAAAATGATTGTATGTAAGAGATTATAATAAAAAAAGAAGAGAGAAAATAATAAAGAAATAAGGTAAGAGAGAGGAGTGATAATGATGGGTGATAAAGGAGGTGGGAGAGTGGGTATATGGGGAAGGGAAAATAATTAAATAATAGGGGTGGGGAAATTTAGGTGGGAATATGGGTAGAATCTTTAGGTATTTTGGTAATTAGATAGAAATGTAAGGGTATTTTAAGATAAAATTTATGTCCAACAATAGAAACGGATACAACAAAAAGAAACGCTTAAAATGAAAACAGATACAACAAAAAGAAATGGAGGGAGTATTTCCCAGTCATCATATGATGTTCTTTACTTGTAATTGGTCAAAAGCGTACAGTAGTGTTGAAGGACTGTCTATTTATACTAGTGTCGTGATAGACTGAAGTTGCGTATCACCAACTCTGTTGACTTGTAGTAAATAGACTTGATTTGCATATCACTAACCCTTTTCCTTTTTTGTTCATGTGGGGGTCTCATACATTAGGAAACAAGCCAACTACTGATACTATTAGCCAATCAAACAAGTCAACAACCAATCTTTAAATTTCAAAATTAAGATACTTTTAATGGTTCATCTGTGACAAAGTTTAACAAAATTAAGATACTTTTAATGGTTAACTAGTGTGGCCCGGGCGATGCTCCGGTCCGGTTGCTACATTGAATAACTAAAGTTTTAGATTTTTCTTGAGCTCAATACTTGACCAAAATACTTATATTCTATAGAATGAAAAATATCCGTGAAGTTCGTCAAACACAAACATGCTAAGTCATTTATCATGGCAAGTAAGTTTTCAATCATATCATCTTACAATTTGTATAATTTGTTTTTTCGTGGAACTAAGTGCGTCAAATTAATAAACACCAAATTAGATATATATGCAGCTATGTAAGGCAATCCTATAGTTGATTATTATGAGACTTAAAAAATTAAGGCAATCCTATAGTTGATTCTTATGAGACTTAAGACATTATGTTTCTTCATGGTTGTCATAATGCTTTAATTTTTTTTCTTTTCAAAATAGTCCATAGACATTAAAAAGTCACATACAAATTTATTTGTTTTAGACTTCATATGAAAATTTATTTATAAATTAATGTGAAGAGATAAACCACAATTGGTGATTGGTTAAGATGGTAATGAGAACTATCATCCACACTTGACGTCTGGTGTTGTAATCTACTAAACTTTTGTTTGGTTTAACTTATTTTTCTAAAATTAATTTATGAACTTATCTGAATTTCAAAGTGACCTAGACAACCGCGCAATAAAACTTAGCCCAATGGGGCAATTGCAATACCAACAACTATTGTCATGCATTTATGAAGTAAGACCTCGAAATCAATTATTGAAGAATCATTGTAACTTTGTGAACTTAATTTCAACCCAATCTTTAACTGTAAGATTTTCTTACATGTGAAATTTATTGCTATAAATAATTGGACAAAGTGTACTAATTCAAGATAACAATTACGGAGTAATAGAAAATGCTTTACTCATAATAATAATGTTAGACCAATGAGGTTTTGGCGTACTGGTTAATACTGATGGTCTATGATAGATTTGAGGTTCGAATCCTAACATAAACTTTGTTTTGTAGGTTTTTGAACGACGAGGACTATCACGGTGGATTCGAGGAAGGTGAAATAGAGACAGTATTCTCAGCAATGGAGGCAAATTACGCGGCATGGGTGAACGGATTTGCACCATTAGCCGTAGGAGCGGATGTACCAACAGCGGTGCGTGAGTTTAGTAGGACATTATTCAACATGAGGCCAGATATATCCCTATTTGTTTGTAGGACAGTTTTCAATAGTGATTTTAGGGGTGTCCTTGGATTAGTTAGGGTACCTTGTTACATTATCCAAACGGCTAAAGATATGTCTGTTCCAGCATCTGTTGCTACTTACATGAAAAACCATCTTGGGGGTAAGAGTACCGTTATTATGCTTAATACCGAAGGCCATTTACCCCACCTTAGCGCACCCGCCCTCTTGGCCCAGTCCCTTAGACGCGCGCTCTCTCAGTAACCTAAGCTACGTTTTGAGACTCGATCTGGCTAGCTAGAGACTCGGGTTTGATTTCGGCGGCCTCATTTATGTCATTTTACGTGCGAGCTGTGAGATATTTTCGTGTTAATTAGCTTGTACTGTTCTATGTACCTCGGCCATAATTGATGCCAATTTTTCCTAGACAATATAATACTCCGTACAAGGTTAAGCTTTGTCATGTGTTATAGACTTATAACAGTGACGAACAATATTGTAAGTTTGAAATTGTACGTGAGGACAAATACGAATGGAGTTCTAATGTTACGGAGCAGTTGTACGGATTTATTTTTGGATTTATCGATGTAGTATATAACAAAATTGTTAGTAAGTGTTCGTATAAATTTGGAGTTTTTTCATCCGTACTACTACTCGGTTGATTTCCACTTCTTGCTTAAAAGTTTAAACGCTACTAATTATTTATCAAACACTGTAAGGATTATGTTGTTTGATAAATAATTCGTAGCCATTTATCTAAGTGATGTAAGTAAAAAAAGAATGAGAGAATCAATCACAAGGTGTACAATAAATTTATCGTACACCAAAGTAATTTTTACCTAGTTTTTTTGTAACTTTTACTATATTTTGGTTAACTTTATATTATAAAAAAAATTGATAGATATATTAACCTTTTAAAAGGTTAAAC

mRNA sequence

GACCAATCAGCATGGCAAAGAATCCTACCTTATTTTACTCCGTACTACCGTGTCATACTCTATGACTTGGCCTGTGCTGGGAGTGTCAACCCTGACTTCTTCGACTTCCATCGATACACCACCCTCGACGCCTACGTCGACGACCTCCTCGACATCCTCGACGCGCTCGCTGTCACGCGTTGCGCGTATGTTGGCCATTCTGTTTCAGCTATGATCGGCCTTCTTGCTTCTATACGTCGTCGTGATCTTTTCTCTAAGCAAATACTTGTTGGTGCTTCTCCTAGGTTTTTGAACGACGAGGACTATCACGGTGGATTCGAGGAAGGTGAAATAGAGACAGTATTCTCAGCAATGGAGGCAAATTACGCGGCATGGGTGAACGGATTTGCACCATTAGCCGTAGGAGCGGATGTACCAACAGCGGTGCGTGAGTTTAGTAGGACATTATTCAACATGAGGCCAGATATATCCCTATTTGTTTGTAGGACAGTTTTCAATAGTGATTTTAGGGGTGTCCTTGGATTAGTTAGGGTACCTTGTTACATTATCCAAACGGCTAAAGATATGTCTGTTCCAGCATCTGTTGCTACTTACATGAAAAACCATCTTGGGGGTAAGAGTACCGTTATTATGCTTAATACCGAAGGCCATTTACCCCACCTTAGCGCACCCGCCCTCTTGGCCCAGTCCCTTAGACGCGCGCTCTCTCAGTAACCTAAGCTACGTTTTGAGACTCGATCTGGCTAGCTAGAGACTCGGGTTTGATTTCGGCGGCCTCATTTATGTCATTTTACGTGCGAGCTGTGAGATATTTTCGTGTTAATTAGCTTGTACTGTTCTATGTACCTCGGCCATAATTGATGCCAATTTTTCCTAGACAATATAATACTCCGTACAAGGTTAAGCTTTGTCATGTGTTATAGACTTATAACAGTGACGAACAATATTGTAAGTTTGAAATTGTACGTGAGGACAAATACGAATGGAGTTCTAATGTTACGGAGCAGTTGTACGGATTTATTTTTGGATTTATCGATGTAGTATATAACAAAATTGTTAGTAAGTGTTCGTATAAATTTGGAGTTTTTTCATCCGTACTACTACTCGGTTGATTTCCACTTCTTGCTTAAAAGTTTAAACGCTACTAATTATTTATCAAACACTGTAAGGATTATGTTGTTTGATAAATAATTCGTAGCCATTTATCTAAGTGATGTAAGTAAAAAAAGAATGAGAGAATCAATCACAAGGTGTACAATAAATTTATCGTACACCAAAGTAATTTTTACCTAGTTTTTTTGTAACTTTTACTATATTTTGGTTAACTTTATATTATAAAAAAAATTGATAGATATATTAACCTTTTAAAAGGTTAAAC

Coding sequence (CDS)

ATGATCGGCCTTCTTGCTTCTATACGTCGTCGTGATCTTTTCTCTAAGCAAATACTTGTTGGTGCTTCTCCTAGGTTTTTGAACGACGAGGACTATCACGGTGGATTCGAGGAAGGTGAAATAGAGACAGTATTCTCAGCAATGGAGGCAAATTACGCGGCATGGGTGAACGGATTTGCACCATTAGCCGTAGGAGCGGATGTACCAACAGCGGTGCGTGAGTTTAGTAGGACATTATTCAACATGAGGCCAGATATATCCCTATTTGTTTGTAGGACAGTTTTCAATAGTGATTTTAGGGGTGTCCTTGGATTAGTTAGGGTACCTTGTTACATTATCCAAACGGCTAAAGATATGTCTGTTCCAGCATCTGTTGCTACTTACATGAAAAACCATCTTGGGGGTAAGAGTACCGTTATTATGCTTAATACCGAAGGCCATTTACCCCACCTTAGCGCACCCGCCCTCTTGGCCCAGTCCCTTAGACGCGCGCTCTCTCAGTAA

Protein sequence

MIGLLASIRRRDLFSKQILVGASPRFLNDEDYHGGFEEGEIETVFSAMEANYAAWVNGFAPLAVGADVPTAVREFSRTLFNMRPDISLFVCRTVFNSDFRGVLGLVRVPCYIIQTAKDMSVPASVATYMKNHLGGKSTVIMLNTEGHLPHLSAPALLAQSLRRALSQ

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
Spo20571	Spo20571	gene

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
Spo20571.1	Spo20571.1-protein	polypeptide

The following five_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Spo20571.1.utr5p.1	Spo20571.1.utr5p.1	five_prime_UTR

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Spo20571.1.CDS.2	Spo20571.1.CDS.2	CDS
Spo20571.1.CDS.1	Spo20571.1.CDS.1	CDS

The following three_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Spo20571.1.utr3p.1	Spo20571.1.utr3p.1	three_prime_UTR

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Spo20571.1.exon.2	Spo20571.1.exon.2	exon
Spo20571.1.exon.1	Spo20571.1.exon.1	exon

Homology

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BLAST of Spo20571.1 vs. NCBI nr
Match: gi|902214245|gb|KNA17451.1| (hypothetical protein SOVF_079820 [Spinacia oleracea])

HSP 1 Score: 332.0 bits (850), Expect = 5.900e-88
Identity = 167/167 (100.00%), Postives = 167/167 (100.00%), Query Frame = 1

		  
Query: 1   MIGLLASIRRRDLFSKQILVGASPRFLNDEDYHGGFEEGEIETVFSAMEANYAAWVNGFA 60
           MIGLLASIRRRDLFSKQILVGASPRFLNDEDYHGGFEEGEIETVFSAMEANYAAWVNGFA
Sbjct: 100 MIGLLASIRRRDLFSKQILVGASPRFLNDEDYHGGFEEGEIETVFSAMEANYAAWVNGFA 159

Query: 61  PLAVGADVPTAVREFSRTLFNMRPDISLFVCRTVFNSDFRGVLGLVRVPCYIIQTAKDMS 120
           PLAVGADVPTAVREFSRTLFNMRPDISLFVCRTVFNSDFRGVLGLVRVPCYIIQTAKDMS
Sbjct: 160 PLAVGADVPTAVREFSRTLFNMRPDISLFVCRTVFNSDFRGVLGLVRVPCYIIQTAKDMS 219

Query: 121 VPASVATYMKNHLGGKSTVIMLNTEGHLPHLSAPALLAQSLRRALSQ 168
           VPASVATYMKNHLGGKSTVIMLNTEGHLPHLSAPALLAQSLRRALSQ
Sbjct: 220 VPASVATYMKNHLGGKSTVIMLNTEGHLPHLSAPALLAQSLRRALSQ 266

[Close]

BLAST of Spo20571.1 vs. NCBI nr
Match: gi|731314724|ref|XP_010688104.1| (PREDICTED: probable strigolactone esterase DAD2 [Beta vulgaris subsp. vulgaris])

HSP 1 Score: 318.5 bits (815), Expect = 6.700e-84
Identity = 159/167 (95.21%), Postives = 163/167 (97.60%), Query Frame = 1

		  
Query: 1   MIGLLASIRRRDLFSKQILVGASPRFLNDEDYHGGFEEGEIETVFSAMEANYAAWVNGFA 60
           MIGLLASIRRR+LFSK IL+GASPRFLND DYHGGFEEGEIETVFSAMEANYAAWVNGFA
Sbjct: 100 MIGLLASIRRRELFSKLILIGASPRFLNDHDYHGGFEEGEIETVFSAMEANYAAWVNGFA 159

Query: 61  PLAVGADVPTAVREFSRTLFNMRPDISLFVCRTVFNSDFRGVLGLVRVPCYIIQTAKDMS 120
           PLAVGADVPTAVREFSRTLFNMRPDISLFVCRTVF+SDFRGVLGLVRVPCYIIQTAKDMS
Sbjct: 160 PLAVGADVPTAVREFSRTLFNMRPDISLFVCRTVFSSDFRGVLGLVRVPCYIIQTAKDMS 219

Query: 121 VPASVATYMKNHLGGKSTVIMLNTEGHLPHLSAPALLAQSLRRALSQ 168
           VPASVATYMKNHLGGK TVIMLNTEGHLPHLSAPA LAQ+LRRALSQ
Sbjct: 220 VPASVATYMKNHLGGKGTVIMLNTEGHLPHLSAPAQLAQALRRALSQ 266

[Close]

BLAST of Spo20571.1 vs. NCBI nr
Match: gi|414145488|pdb|4DNP|A (Chain A, Crystal Structure Of Dad2)

HSP 1 Score: 286.2 bits (731), Expect = 3.700e-74
Identity = 142/166 (85.54%), Postives = 152/166 (91.57%), Query Frame = 1

		  
Query: 1   MIGLLASIRRRDLFSKQILVGASPRFLNDEDYHGGFEEGEIETVFSAMEANYAAWVNGFA 60
           MIG+LASIRR +LFSK IL+GASPRFLNDEDYHGGFE+GEIE VFSAMEANY AWVNGFA
Sbjct: 102 MIGILASIRRPELFSKLILIGASPRFLNDEDYHGGFEQGEIEKVFSAMEANYEAWVNGFA 161

Query: 61  PLAVGADVPTAVREFSRTLFNMRPDISLFVCRTVFNSDFRGVLGLVRVPCYIIQTAKDMS 120
           PLAVGADVP AVREFSRTLFNMRPDI+LFV RTVFNSD RGVLGLV+VPC+I QTA+D S
Sbjct: 162 PLAVGADVPAAVREFSRTLFNMRPDITLFVSRTVFNSDMRGVLGLVKVPCHIFQTARDHS 221

Query: 121 VPASVATYMKNHLGGKSTVIMLNTEGHLPHLSAPALLAQSLRRALS 167
           VPASVATY+KNHLGGK+TV  LN EGHLPHLSAP LLAQ LRRALS
Sbjct: 222 VPASVATYLKNHLGGKNTVHWLNIEGHLPHLSAPTLLAQELRRALS 267

[Close]

BLAST of Spo20571.1 vs. NCBI nr
Match: gi|590597067|ref|XP_007018509.1| (Alpha/beta-Hydrolases superfamily protein [Theobroma cacao])

HSP 1 Score: 286.2 bits (731), Expect = 3.700e-74
Identity = 139/167 (83.23%), Postives = 155/167 (92.81%), Query Frame = 1

		  
Query: 1   MIGLLASIRRRDLFSKQILVGASPRFLNDEDYHGGFEEGEIETVFSAMEANYAAWVNGFA 60
           MIG+LASIRR +LFSK IL+GASPRFLND DYHGGFE+GEIE VFSAMEANY AWVNGFA
Sbjct: 100 MIGILASIRRPELFSKLILIGASPRFLNDNDYHGGFEQGEIEKVFSAMEANYEAWVNGFA 159

Query: 61  PLAVGADVPTAVREFSRTLFNMRPDISLFVCRTVFNSDFRGVLGLVRVPCYIIQTAKDMS 120
           PLAVGADVPTAVREFSRTLFNMRPDISLFVCRTVFNSD RGVLGLVRVPC ++QTA+D+S
Sbjct: 160 PLAVGADVPTAVREFSRTLFNMRPDISLFVCRTVFNSDLRGVLGLVRVPCCVVQTARDVS 219

Query: 121 VPASVATYMKNHLGGKSTVIMLNTEGHLPHLSAPALLAQSLRRALSQ 168
           VPASVA Y++ HLGG++T+ +L TEGHLPHLSAPALLAQ LRRAL++
Sbjct: 220 VPASVAEYLRTHLGGRTTIEILKTEGHLPHLSAPALLAQVLRRALAR 266

[Close]

BLAST of Spo20571.1 vs. NCBI nr
Match: gi|414145489|pdb|4DNQ|A (Chain A, Crystal Structure Of Dad2 S96a Mutant)

HSP 1 Score: 286.2 bits (731), Expect = 3.700e-74
Identity = 142/166 (85.54%), Postives = 152/166 (91.57%), Query Frame = 1

		  
Query: 1   MIGLLASIRRRDLFSKQILVGASPRFLNDEDYHGGFEEGEIETVFSAMEANYAAWVNGFA 60
           MIG+LASIRR +LFSK IL+GASPRFLNDEDYHGGFE+GEIE VFSAMEANY AWVNGFA
Sbjct: 102 MIGILASIRRPELFSKLILIGASPRFLNDEDYHGGFEQGEIEKVFSAMEANYEAWVNGFA 161

Query: 61  PLAVGADVPTAVREFSRTLFNMRPDISLFVCRTVFNSDFRGVLGLVRVPCYIIQTAKDMS 120
           PLAVGADVP AVREFSRTLFNMRPDI+LFV RTVFNSD RGVLGLV+VPC+I QTA+D S
Sbjct: 162 PLAVGADVPAAVREFSRTLFNMRPDITLFVSRTVFNSDMRGVLGLVKVPCHIFQTARDHS 221

Query: 121 VPASVATYMKNHLGGKSTVIMLNTEGHLPHLSAPALLAQSLRRALS 167
           VPASVATY+KNHLGGK+TV  LN EGHLPHLSAP LLAQ LRRALS
Sbjct: 222 VPASVATYLKNHLGGKNTVHWLNIEGHLPHLSAPTLLAQELRRALS 267

[Close]

BLAST of Spo20571.1 vs. UniProtKB/TrEMBL
Match: A0A0K9RD40_SPIOL (Uncharacterized protein OS=Spinacia oleracea GN=SOVF_079820 PE=4 SV=1)

HSP 1 Score: 332.0 bits (850), Expect = 4.100e-88
Identity = 167/167 (100.00%), Postives = 167/167 (100.00%), Query Frame = 1

		  
Query: 1   MIGLLASIRRRDLFSKQILVGASPRFLNDEDYHGGFEEGEIETVFSAMEANYAAWVNGFA 60
           MIGLLASIRRRDLFSKQILVGASPRFLNDEDYHGGFEEGEIETVFSAMEANYAAWVNGFA
Sbjct: 100 MIGLLASIRRRDLFSKQILVGASPRFLNDEDYHGGFEEGEIETVFSAMEANYAAWVNGFA 159

Query: 61  PLAVGADVPTAVREFSRTLFNMRPDISLFVCRTVFNSDFRGVLGLVRVPCYIIQTAKDMS 120
           PLAVGADVPTAVREFSRTLFNMRPDISLFVCRTVFNSDFRGVLGLVRVPCYIIQTAKDMS
Sbjct: 160 PLAVGADVPTAVREFSRTLFNMRPDISLFVCRTVFNSDFRGVLGLVRVPCYIIQTAKDMS 219

Query: 121 VPASVATYMKNHLGGKSTVIMLNTEGHLPHLSAPALLAQSLRRALSQ 168
           VPASVATYMKNHLGGKSTVIMLNTEGHLPHLSAPALLAQSLRRALSQ
Sbjct: 220 VPASVATYMKNHLGGKSTVIMLNTEGHLPHLSAPALLAQSLRRALSQ 266

[Close]

BLAST of Spo20571.1 vs. UniProtKB/TrEMBL
Match: A0A0J8D481_BETVU (Uncharacterized protein OS=Beta vulgaris subsp. vulgaris GN=BVRB_1g015160 PE=4 SV=1)

HSP 1 Score: 318.5 bits (815), Expect = 4.700e-84
Identity = 159/167 (95.21%), Postives = 163/167 (97.60%), Query Frame = 1

		  
Query: 1   MIGLLASIRRRDLFSKQILVGASPRFLNDEDYHGGFEEGEIETVFSAMEANYAAWVNGFA 60
           MIGLLASIRRR+LFSK IL+GASPRFLND DYHGGFEEGEIETVFSAMEANYAAWVNGFA
Sbjct: 100 MIGLLASIRRRELFSKLILIGASPRFLNDHDYHGGFEEGEIETVFSAMEANYAAWVNGFA 159

Query: 61  PLAVGADVPTAVREFSRTLFNMRPDISLFVCRTVFNSDFRGVLGLVRVPCYIIQTAKDMS 120
           PLAVGADVPTAVREFSRTLFNMRPDISLFVCRTVF+SDFRGVLGLVRVPCYIIQTAKDMS
Sbjct: 160 PLAVGADVPTAVREFSRTLFNMRPDISLFVCRTVFSSDFRGVLGLVRVPCYIIQTAKDMS 219

Query: 121 VPASVATYMKNHLGGKSTVIMLNTEGHLPHLSAPALLAQSLRRALSQ 168
           VPASVATYMKNHLGGK TVIMLNTEGHLPHLSAPA LAQ+LRRALSQ
Sbjct: 220 VPASVATYMKNHLGGKGTVIMLNTEGHLPHLSAPAQLAQALRRALSQ 266

[Close]

BLAST of Spo20571.1 vs. UniProtKB/TrEMBL
Match: L7MTK6_PETHY (DAD2 OS=Petunia hybrida GN=dad2 PE=1 SV=1)

HSP 1 Score: 286.2 bits (731), Expect = 2.600e-74
Identity = 142/166 (85.54%), Postives = 152/166 (91.57%), Query Frame = 1

		  
Query: 1   MIGLLASIRRRDLFSKQILVGASPRFLNDEDYHGGFEEGEIETVFSAMEANYAAWVNGFA 60
           MIG+LASIRR +LFSK IL+GASPRFLNDEDYHGGFE+GEIE VFSAMEANY AWVNGFA
Sbjct: 102 MIGILASIRRPELFSKLILIGASPRFLNDEDYHGGFEQGEIEKVFSAMEANYEAWVNGFA 161

Query: 61  PLAVGADVPTAVREFSRTLFNMRPDISLFVCRTVFNSDFRGVLGLVRVPCYIIQTAKDMS 120
           PLAVGADVP AVREFSRTLFNMRPDI+LFV RTVFNSD RGVLGLV+VPC+I QTA+D S
Sbjct: 162 PLAVGADVPAAVREFSRTLFNMRPDITLFVSRTVFNSDMRGVLGLVKVPCHIFQTARDHS 221

Query: 121 VPASVATYMKNHLGGKSTVIMLNTEGHLPHLSAPALLAQSLRRALS 167
           VPASVATY+KNHLGGK+TV  LN EGHLPHLSAP LLAQ LRRALS
Sbjct: 222 VPASVATYLKNHLGGKNTVHWLNIEGHLPHLSAPTLLAQELRRALS 267

[Close]

BLAST of Spo20571.1 vs. UniProtKB/TrEMBL
Match: A0A061FMM2_THECC (Alpha/beta-Hydrolases superfamily protein OS=Theobroma cacao GN=TCM_034711 PE=4 SV=1)

HSP 1 Score: 286.2 bits (731), Expect = 2.600e-74
Identity = 139/167 (83.23%), Postives = 155/167 (92.81%), Query Frame = 1

		  
Query: 1   MIGLLASIRRRDLFSKQILVGASPRFLNDEDYHGGFEEGEIETVFSAMEANYAAWVNGFA 60
           MIG+LASIRR +LFSK IL+GASPRFLND DYHGGFE+GEIE VFSAMEANY AWVNGFA
Sbjct: 100 MIGILASIRRPELFSKLILIGASPRFLNDNDYHGGFEQGEIEKVFSAMEANYEAWVNGFA 159

Query: 61  PLAVGADVPTAVREFSRTLFNMRPDISLFVCRTVFNSDFRGVLGLVRVPCYIIQTAKDMS 120
           PLAVGADVPTAVREFSRTLFNMRPDISLFVCRTVFNSD RGVLGLVRVPC ++QTA+D+S
Sbjct: 160 PLAVGADVPTAVREFSRTLFNMRPDISLFVCRTVFNSDLRGVLGLVRVPCCVVQTARDVS 219

Query: 121 VPASVATYMKNHLGGKSTVIMLNTEGHLPHLSAPALLAQSLRRALSQ 168
           VPASVA Y++ HLGG++T+ +L TEGHLPHLSAPALLAQ LRRAL++
Sbjct: 220 VPASVAEYLRTHLGGRTTIEILKTEGHLPHLSAPALLAQVLRRALAR 266

[Close]

BLAST of Spo20571.1 vs. UniProtKB/TrEMBL
Match: L7MTK5_PETHY (DAD2 OS=Petunia hybrida GN=dad2 PE=1 SV=1)

HSP 1 Score: 286.2 bits (731), Expect = 2.600e-74
Identity = 142/166 (85.54%), Postives = 152/166 (91.57%), Query Frame = 1

		  
Query: 1   MIGLLASIRRRDLFSKQILVGASPRFLNDEDYHGGFEEGEIETVFSAMEANYAAWVNGFA 60
           MIG+LASIRR +LFSK IL+GASPRFLNDEDYHGGFE+GEIE VFSAMEANY AWVNGFA
Sbjct: 102 MIGILASIRRPELFSKLILIGASPRFLNDEDYHGGFEQGEIEKVFSAMEANYEAWVNGFA 161

Query: 61  PLAVGADVPTAVREFSRTLFNMRPDISLFVCRTVFNSDFRGVLGLVRVPCYIIQTAKDMS 120
           PLAVGADVP AVREFSRTLFNMRPDI+LFV RTVFNSD RGVLGLV+VPC+I QTA+D S
Sbjct: 162 PLAVGADVPAAVREFSRTLFNMRPDITLFVSRTVFNSDMRGVLGLVKVPCHIFQTARDHS 221

Query: 121 VPASVATYMKNHLGGKSTVIMLNTEGHLPHLSAPALLAQSLRRALS 167
           VPASVATY+KNHLGGK+TV  LN EGHLPHLSAP LLAQ LRRALS
Sbjct: 222 VPASVATYLKNHLGGKNTVHWLNIEGHLPHLSAPTLLAQELRRALS 267

[Close]

BLAST of Spo20571.1 vs. ExPASy Swiss-Prot
Match: DAD2_PETHY (Probable strigolactone esterase DAD2 OS=Petunia hybrida GN=DAD2 PE=1 SV=1)

HSP 1 Score: 286.2 bits (731), Expect = 2.300e-76
Identity = 142/166 (85.54%), Postives = 152/166 (91.57%), Query Frame = 1

		  
Query: 1   MIGLLASIRRRDLFSKQILVGASPRFLNDEDYHGGFEEGEIETVFSAMEANYAAWVNGFA 60
           MIG+LASIRR +LFSK IL+GASPRFLNDEDYHGGFE+GEIE VFSAMEANY AWVNGFA
Sbjct: 100 MIGILASIRRPELFSKLILIGASPRFLNDEDYHGGFEQGEIEKVFSAMEANYEAWVNGFA 159

Query: 61  PLAVGADVPTAVREFSRTLFNMRPDISLFVCRTVFNSDFRGVLGLVRVPCYIIQTAKDMS 120
           PLAVGADVP AVREFSRTLFNMRPDI+LFV RTVFNSD RGVLGLV+VPC+I QTA+D S
Sbjct: 160 PLAVGADVPAAVREFSRTLFNMRPDITLFVSRTVFNSDMRGVLGLVKVPCHIFQTARDHS 219

Query: 121 VPASVATYMKNHLGGKSTVIMLNTEGHLPHLSAPALLAQSLRRALS 167
           VPASVATY+KNHLGGK+TV  LN EGHLPHLSAP LLAQ LRRALS
Sbjct: 220 VPASVATYLKNHLGGKNTVHWLNIEGHLPHLSAPTLLAQELRRALS 265

[Close]

BLAST of Spo20571.1 vs. ExPASy Swiss-Prot
Match: D14_ARATH (Strigolactone esterase D14 OS=Arabidopsis thaliana GN=D14 PE=1 SV=1)

HSP 1 Score: 268.9 bits (686), Expect = 3.800e-71
Identity = 136/165 (82.42%), Postives = 147/165 (89.09%), Query Frame = 1

		  
Query: 1   MIGLLASIRRRDLFSKQILVGASPRFLNDEDYHGGFEEGEIETVFSAMEANYAAWVNGFA 60
           MIG++ASIRR +LFSK IL+G SPRFLNDEDYHGGFEEGEIE VFSAMEANY AWV+GFA
Sbjct: 101 MIGIIASIRRPELFSKLILIGFSPRFLNDEDYHGGFEEGEIEKVFSAMEANYEAWVHGFA 160

Query: 61  PLAVGADVPTAVREFSRTLFNMRPDISLFVCRTVFNSDFRGVLGLVRVPCYIIQTAKDMS 120
           PLAVGADVP AVREFSRTLFNMRPDISLFV RTVFNSD RGVLGLVRVP  +IQTAKD+S
Sbjct: 161 PLAVGADVPAAVREFSRTLFNMRPDISLFVSRTVFNSDLRGVLGLVRVPTCVIQTAKDVS 220

Query: 121 VPASVATYMKNHLGGKSTVIMLNTEGHLPHLSAPALLAQSLRRAL 166
           VPASVA Y+++HLGG +TV  L TEGHLP LSAPA LAQ LRRAL
Sbjct: 221 VPASVAEYLRSHLGGDTTVETLKTEGHLPQLSAPAQLAQFLRRAL 265

[Close]

BLAST of Spo20571.1 vs. ExPASy Swiss-Prot
Match: D14_ORYSJ (Strigolactone esterase D14 OS=Oryza sativa subsp. japonica GN=D14 PE=1 SV=1)

HSP 1 Score: 256.5 bits (654), Expect = 2.000e-67
Identity = 123/167 (73.65%), Postives = 144/167 (86.23%), Query Frame = 1

		  
Query: 1   MIGLLASIRRRDLFSKQILVGASPRFLNDEDYHGGFEEGEIETVFSAMEANYAAWVNGFA 60
           MIG+LASIRR DLF+K +L+GASPRFLND DYHGGFE  EI+ VF AM ANY+AW  G+A
Sbjct: 151 MIGILASIRRPDLFAKLVLIGASPRFLNDSDYHGGFELEEIQQVFDAMGANYSAWATGYA 210

Query: 61  PLAVGADVPTAVREFSRTLFNMRPDISLFVCRTVFNSDFRGVLGLVRVPCYIIQTAKDMS 120
           PLAVGADVP AV+EFSRTLFNMRPDISL VC+TVF +D RGVLG+VR PC ++QT +D+S
Sbjct: 211 PLAVGADVPAAVQEFSRTLFNMRPDISLHVCQTVFKTDLRGVLGMVRAPCVVVQTTRDVS 270

Query: 121 VPASVATYMKNHLGGKSTVIMLNTEGHLPHLSAPALLAQSLRRALSQ 168
           VPASVA Y+K HLGG++TV  L TEGHLPHLSAP+LLAQ LRRAL++
Sbjct: 271 VPASVAAYLKAHLGGRTTVEFLQTEGHLPHLSAPSLLAQVLRRALAR 317

[Close]

BLAST of Spo20571.1 vs. ExPASy Swiss-Prot
Match: D14L_ORYSJ (Probable esterase D14L OS=Oryza sativa subsp. japonica GN=D14L PE=2 SV=1)

HSP 1 Score: 188.7 bits (478), Expect = 5.000e-47
Identity = 91/164 (55.49%), Postives = 125/164 (76.22%), Query Frame = 1

		  
Query: 1   MIGLLASIRRRDLFSKQILVGASPRFLNDEDYHGGFEEGEIETVFSAMEANYAAWVNGFA 60
           +IG +ASI R DLFSK +L+ ASPR+LND DY+GGFE+ +++ +F AM +NY AW +GFA
Sbjct: 100 VIGAIASISRPDLFSKLVLLSASPRYLNDVDYYGGFEQEDLDELFEAMGSNYKAWCSGFA 159

Query: 61  PLAVGADVPT-AVREFSRTLFNMRPDISLFVCRTVFNSDFRGVLGLVRVPCYIIQTAKDM 120
           PL VG D+ + AV+EFSRTLFN+RPDI+L V +T+F SD R +L LV VPC+I+Q+ KD+
Sbjct: 160 PLCVGGDMESVAVQEFSRTLFNIRPDIALSVAQTIFQSDVRSLLPLVTVPCHIVQSTKDL 219

Query: 121 SVPASVATYMKNHLGGKSTVIMLNTEGHLPHLSAPALLAQSLRR 164
           +VP  V+ Y+  HLGG S V ++ +EGHLP LS+P ++   L R
Sbjct: 220 AVPVVVSEYLHKHLGGDSIVEVMPSEGHLPQLSSPDIVIPVLLR 263

[Close]

BLAST of Spo20571.1 vs. ExPASy Swiss-Prot
Match: KAI2_ARATH (Probable esterase KAI2 OS=Arabidopsis thaliana GN=KAI2 PE=1 SV=1)

HSP 1 Score: 178.3 bits (451), Expect = 6.800e-44
Identity = 85/155 (54.84%), Postives = 119/155 (76.77%), Query Frame = 1

		  
Query: 1   MIGLLASIRRRDLFSKQILVGASPRFLNDEDYHGGFEEGEIETVFSAMEANYAAWVNGFA 60
           MIG+LAS+ R DLFSK +++ ASPR++ND DY GGFE+ ++  +F A+ +NY AW  GFA
Sbjct: 99  MIGVLASLNRPDLFSKIVMISASPRYVNDVDYQGGFEQEDLNQLFEAIRSNYKAWCLGFA 158

Query: 61  PLAVGADVPT-AVREFSRTLFNMRPDISLFVCRTVFNSDFRGVLGLVRVPCYIIQTAKDM 120
           PLAVG D+ + AV+EFSRTLFNMRPDI+L V +T+F SD R +L  V VPC+I+Q+ KD+
Sbjct: 159 PLAVGGDMDSIAVQEFSRTLFNMRPDIALSVGQTIFQSDMRQILPFVTVPCHILQSVKDL 218

Query: 121 SVPASVATYMKNHLGGKSTVIMLNTEGHLPHLSAP 155
           +VP  V+ Y+  +LG +S V ++ ++GHLP LS+P
Sbjct: 219 AVPVVVSEYLHANLGCESVVEVIPSDGHLPQLSSP 253

[Close]

BLAST of Spo20571.1 vs. TAIR (Arabidopsis)
Match: AT3G03990.1 (alpha/beta-Hydrolases superfamily protein)

HSP 1 Score: 268.9 bits (686), Expect = 2.200e-72
Identity = 136/165 (82.42%), Postives = 147/165 (89.09%), Query Frame = 1

		  
Query: 1   MIGLLASIRRRDLFSKQILVGASPRFLNDEDYHGGFEEGEIETVFSAMEANYAAWVNGFA 60
           MIG++ASIRR +LFSK IL+G SPRFLNDEDYHGGFEEGEIE VFSAMEANY AWV+GFA
Sbjct: 101 MIGIIASIRRPELFSKLILIGFSPRFLNDEDYHGGFEEGEIEKVFSAMEANYEAWVHGFA 160

Query: 61  PLAVGADVPTAVREFSRTLFNMRPDISLFVCRTVFNSDFRGVLGLVRVPCYIIQTAKDMS 120
           PLAVGADVP AVREFSRTLFNMRPDISLFV RTVFNSD RGVLGLVRVP  +IQTAKD+S
Sbjct: 161 PLAVGADVPAAVREFSRTLFNMRPDISLFVSRTVFNSDLRGVLGLVRVPTCVIQTAKDVS 220

Query: 121 VPASVATYMKNHLGGKSTVIMLNTEGHLPHLSAPALLAQSLRRAL 166
           VPASVA Y+++HLGG +TV  L TEGHLP LSAPA LAQ LRRAL
Sbjct: 221 VPASVAEYLRSHLGGDTTVETLKTEGHLPQLSAPAQLAQFLRRAL 265

[Close]

BLAST of Spo20571.1 vs. TAIR (Arabidopsis)
Match: AT4G37470.1 (alpha/beta-Hydrolases superfamily protein)

HSP 1 Score: 178.3 bits (451), Expect = 3.800e-45
Identity = 85/155 (54.84%), Postives = 119/155 (76.77%), Query Frame = 1

		  
Query: 1   MIGLLASIRRRDLFSKQILVGASPRFLNDEDYHGGFEEGEIETVFSAMEANYAAWVNGFA 60
           MIG+LAS+ R DLFSK +++ ASPR++ND DY GGFE+ ++  +F A+ +NY AW  GFA
Sbjct: 99  MIGVLASLNRPDLFSKIVMISASPRYVNDVDYQGGFEQEDLNQLFEAIRSNYKAWCLGFA 158

Query: 61  PLAVGADVPT-AVREFSRTLFNMRPDISLFVCRTVFNSDFRGVLGLVRVPCYIIQTAKDM 120
           PLAVG D+ + AV+EFSRTLFNMRPDI+L V +T+F SD R +L  V VPC+I+Q+ KD+
Sbjct: 159 PLAVGGDMDSIAVQEFSRTLFNMRPDIALSVGQTIFQSDMRQILPFVTVPCHILQSVKDL 218

Query: 121 SVPASVATYMKNHLGGKSTVIMLNTEGHLPHLSAP 155
           +VP  V+ Y+  +LG +S V ++ ++GHLP LS+P
Sbjct: 219 AVPVVVSEYLHANLGCESVVEVIPSDGHLPQLSSP 253

[Close]

BLAST of Spo20571.1 vs. TAIR (Arabidopsis)
Match: AT3G24420.1 (alpha/beta-Hydrolases superfamily protein)

HSP 1 Score: 137.1 bits (344), Expect = 9.800e-33
Identity = 69/166 (41.57%), Postives = 107/166 (64.46%), Query Frame = 1

		  
Query: 1   MIGLLASIRRRDLFSKQILVGASPRFLNDEDYHGGFEEGEIETVFSAMEANYAAWVNGFA 60
           +IG  ASI+R DLF+  +L+ ASPR++N EDY GGFE  +I+T+ +++ +NY AW   F+
Sbjct: 106 VIGCAASIKRPDLFTNLLLIAASPRYINSEDYKGGFESKDIDTIITSIGSNYEAWAVDFS 165

Query: 61  PLAVGADVPTAVREFSRTLFNMRPDISLFVCRTVFNSDFRGVLGLVRVPCYIIQTAKDMS 120
              V +    +V+ F ++L  M+P+ +L + + VF SD R +LG V VPC++IQ   D+ 
Sbjct: 166 SFVVDSRDSLSVQRFEKSLKKMKPETALALAKIVFGSDEREILGQVSVPCHVIQPGNDVV 225

Query: 121 VPASVATYMKNHLGGKSTV-IMLNTEGHLPHLSAPALLAQSLRRAL 166
           VP SVA +M+  + GKSTV I+ +  GH P +++   L   +RR L
Sbjct: 226 VPVSVAYFMQEKIKGKSTVEIIEDAIGHFPQMTSHLELLGVMRRLL 271

The following BLAST results are available for this feature:

BLAST of Spo20571.1 vs. NCBI nr
BLAST of Spo20571.1 vs. UniProtKB/TrEMBL
BLAST of Spo20571.1 vs. ExPASy Swiss-Prot
BLAST of Spo20571.1 vs. TAIR (Arabidopsis)

BLAST of Spo20571.1 vs. NCBI nr
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. NCBI nr)
Total hits: 5

Position :

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Match Name	E-value	Identity	Description
gi\|902214245\|gb\|KNA17451.1\|	5.9e-88	100.	hypothetical protein SOVF_0798...	[more]
gi\|731314724\|ref\|XP_010688104.1\|	6.7e-84	95.2	PREDICTED: probable strigolact...	[more]
gi\|414145488\|pdb\|4DNP\|A	3.7e-74	85.5	Chain A, Crystal Structure Of ...	[more]
gi\|590597067\|ref\|XP_007018509.1\|	3.7e-74	83.2	Alpha/beta-Hydrolases superfam...	[more]
gi\|414145489\|pdb\|4DNQ\|A	3.7e-74	85.5	Chain A, Crystal Structure Of ...	[more]

BLAST of Spo20571.1 vs. UniProtKB/TrEMBL
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. UniprotKB/TrEMBL)
Total hits: 5

Position :

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Match Name	E-value	Identity	Description
A0A0K9RD40_SPIOL	4.1e-88	100.	Uncharacterized protein OS=Spi...	[more]
A0A0J8D481_BETVU	4.7e-84	95.2	Uncharacterized protein OS=Bet...	[more]
L7MTK6_PETHY	2.6e-74	85.5	DAD2 OS=Petunia hybrida GN=dad...	[more]
A0A061FMM2_THECC	2.6e-74	83.2	Alpha/beta-Hydrolases superfam...	[more]
L7MTK5_PETHY	2.6e-74	85.5	DAD2 OS=Petunia hybrida GN=dad...	[more]

BLAST of Spo20571.1 vs. ExPASy Swiss-Prot
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. ExPASy SwissProt)
Total hits: 5

Position :

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Match Name	E-value	Identity	Description
DAD2_PETHY	2.3e-76	85.5	Probable strigolactone esteras...	[more]
D14_ARATH	3.8e-71	82.4	Strigolactone esterase D14 OS=...	[more]
D14_ORYSJ	2.0e-67	73.6	Strigolactone esterase D14 OS=...	[more]
D14L_ORYSJ	5.0e-47	55.4	Probable esterase D14L OS=Oryz...	[more]
KAI2_ARATH	6.8e-44	54.8	Probable esterase KAI2 OS=Arab...	[more]

BLAST of Spo20571.1 vs. TAIR (Arabidopsis)
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. TAIR)
Total hits: 3

Position :

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Match Name	E-value	Identity	Description
AT3G03990.1	2.2e-72	82.4	alpha/beta-Hydrolases superfam...	[more]
AT4G37470.1	3.8e-45	54.8	alpha/beta-Hydrolases superfam...	[more]
AT3G24420.1	9.8e-33	41.5	alpha/beta-Hydrolases superfam...	[more]

InterPro

Analysis Name: InterPro Annotations of S. oleracea
Date Performed: 2018-06-29

Position :

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IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PANTHER	PTHR10992	ALPHA/BETA HYDROLASE FOLD-CONTAINING PROTEIN	coord: 1..167 score: 1.3E

GO Annotation

GO Assignments

This mRNA is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0010223	secondary shoot formation
biological_process	GO:1901601	strigolactone biosynthetic process
biological_process	GO:0009805	coumarin biosynthetic process
biological_process	GO:0015824	proline transport
biological_process	GO:0009611	response to wounding
molecular_function	GO:0016788	hydrolase activity, acting on ester bonds