Spo08645.1 (mRNA) | SpinachBase

Overview


Name	Spo08645.1
Type	mRNA
Organism	Spinacia oleracea (Spinach)
Description	Ycf20-like protein
Location	chr2 : 47104084 .. 47106770 (+)
Sequence length	1267

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

TAAAAAAAAATGACATCATCAAAACAGAAAAAAAAAAAGAAAAAAGAAGTTGCTGCCTAGCTGGACACCAGCCCCATCACCGGGTCACATTACTTCGCACAAGCCCCATCAGTCCATCACCAGCTTCTGAACACCAGTCTCTCTTCTCCACCATCATCGCCGCCGGTAAATCCAAATCCTACTTTCTCTTTGTTTGCTTTTCTCAGTCTTCAATCGAGTTGGGTTTCTTGATTTTATTAATTGGTAAACCTACAATTTTTCTTTTGATAATTGTACTATGTTGATTTCCAGCTTTTTTTTTTGTAAATAATTTTCATTTAGCTTTTGTATGTTGGGTTTGTCTGTGAAATTAAGAGTGTGGAAGTTGTGTATTGATGTATTCAAATTCAAAAGTCTTCATGTTTGCTAAATTTCTGCAGAACTGTTCATCTGGGTTATTTAATCAACTACTAATCTAGTTTATTTTGCTAAATTTTCATCTTTTTTTATAATGTTAACTTATAATTTGCAAAATTAGACTCCAATTATTTGGGTATTGTATTGAAAGTAGATTATTCTTTCATTGTATTGAGCCTTGATTTCTCTATTGGTAAGCCTGGAATATATGATTCTTTCATTGTATTGAGACATAATTCTTCATTGATGCTGGAGAGTTGTTTGGGGGACTGATAATTTGCTAGGGTTGCTAACTTGTTACGTGTATGTTTTTAAATGTGACTTATAGAGTGGATGGTGAATTGCAAGGGTCTCCATGATACTGACATTTGGAACTAGATTCCGGCAATGTTCGACAAATGTGTTATCGACCTCCATCAAGATTTCGAGCTTAAGGTTTTCTATTAAAAACCTTGTTGCTTCACTTCAGAAAGTGGCTTTCTATGGTGGCAATGGGGCTCATTTTGGACTATCTTTCCTTCAAACAAGAGAGCTCAGTATGATTGGTAGTTGCAAGTAAGTTATCGCTGAACTTCCTGTGGATTTTCCAGCCTTAACTTTTGATAATCTGACCATAATGCAGTGTTCATAACCAGAAATATGAACATGCACTACTACAAGATCAGAGGAGTCAATTCCAAGCTCAAGCTGCTGCTGAACTTCTAGTTTTTTGTTTCCATTCCATTGTAAAGTTCTATCTGCCTTAATCTGACTTAAAGAATTTTGTTTGCAGGAGAACAGACTGGTCAATAAAGAGCAGTGCAGATGGCAGAGGACTGGATCCTCTAACCGGTAGTGGTGATGGAAGAACTCGATTACTTAAAACAATTCAGAGTCTACAGATTAGATTAAATGCAAGGATCCAAGATTTTCGGAAAGATCTTCCTAAAAAGTTTCTATTTTTCTTGGTGGGATTTTATTGTGCAACCGCATTTGCTACCGTGATTGGGCAAACAGGTGATTGGGACATTATGTCTGCTGCGGTGGCTGTTGCTGTGGTGGAGGGTATTGGGGCTCTTATGTACAAAGTTTCTGTACCTTTGCTTGACAGGACCAGGAATCTTATTGTTCTGTTTAATTACTGGAAAGCTGGCCTTACATTGGGTCTTTTCTTGGATTCATTCAAGTATGAATTAAGTTGAGAATATTTGCTTGCTCTCGTTTGTGTAGTACTAGACGTCCCATGTTCTGATTACTTTCCAACCTATTTTTCAGGTATTAAGGTATCAGGTGTCAACTCTTTTGAAGGCAGGGCCTTGAATTATAGTGAGGCAATTTAAGACGTTGCTGGAATGTACATTGGATTAGATATGAGGGTAAGTCCTCTAGACATCCCAATTCAATATGATCACTGATTTGTGGAACACTACAAAAGTTAGTAGGGTAACATGTACAAAGTTTGTCTATCAATATGGGGTTGGGATAGACAATTAGGGTTCAATAGCCGGGGTATAAAACGATGTCAACTTGCAATCCATGATTTTGAATATTGGAGTTTCGAGGAAATGATTCTTATGTAACATTCTTACCATGAATTGCACTTTTAATTCTATGAAGGATGATCGATCTCTTAGCCCCTTTTAGATAGATGAAAAGAGCAATAACTCATAGTTTTCGTAATTTCTAGTAAATTTCTACATTACTAAGGCTCAGTTCTCTCAGCAAAAAACAATTGAAATTCAGGAAAAAATATGTTTTTTTCAGCAAAGAATTGAGCCTAAATATGTTACTGTGATGTAGACTTCCCTTTCTTCTTTGCATCTTTGGTAAAATATTTGTATAATTCTATCCTGTAGGTTTTCTAATAACAAAAGTAGCATTACAGGACAGCGAAGGTAAAATTCTGGTTTATTGGCTTTCTTCTTTTGCAGATTTTCTGGATCTGTTTCAGGGCAGCTACATTCTGAAAGAGATGAATGTATATTGTGGATTCACAAACAATATAGAAAAACAGCACTTGCTCTGTTCATCGAAACATGTAATATACTTCGTAGATGCTAAACTTATCAGGAAACACTGATACAAAGCGAACAAAGCATGTATAGAAAAGGCGAATTTTATGTTCCTTACTTTCTACTTGTTGTTAGTTGATGACTTGATTTTTATATGCTGCTTTTCTTTGTGTAAAGATGAACACAAGTTCCCTGGTATCTAAGCATATTCAAAATATGTATTGTACATATTGTAAAGTTGATATTCAAAACTGGAAGTCACAGTTTGAGTTACTAAATTTGGATAGTTGACTTGCCTGT

mRNA sequence

TAAAAAAAAATGACATCATCAAAACAGAAAAAAAAAAAGAAAAAAGAAGTTGCTGCCTAGCTGGACACCAGCCCCATCACCGGGTCACATTACTTCGCACAAGCCCCATCAGTCCATCACCAGCTTCTGAACACCAGTCTCTCTTCTCCACCATCATCGCCGCCGAGTGGATGGTGAATTGCAAGGGTCTCCATGATACTGACATTTGGAACTAGATTCCGGCAATGTTCGACAAATGTGTTATCGACCTCCATCAAGATTTCGAGCTTAAGGTTTTCTATTAAAAACCTTGTTGCTTCACTTCAGAAAGTGGCTTTCTATGGTGGCAATGGGGCTCATTTTGGACTATCTTTCCTTCAAACAAGAGAGCTCAGTATGATTGGTAGTTGCAAGAGAACAGACTGGTCAATAAAGAGCAGTGCAGATGGCAGAGGACTGGATCCTCTAACCGGTAGTGGTGATGGAAGAACTCGATTACTTAAAACAATTCAGAGTCTACAGATTAGATTAAATGCAAGGATCCAAGATTTTCGGAAAGATCTTCCTAAAAAGTTTCTATTTTTCTTGGTGGGATTTTATTGTGCAACCGCATTTGCTACCGTGATTGGGCAAACAGGTGATTGGGACATTATGTCTGCTGCGGTGGCTGTTGCTGTGGTGGAGGGTATTGGGGCTCTTATGTACAAAGTTTCTGTACCTTTGCTTGACAGGACCAGGAATCTTATTGTTCTGTTTAATTACTGGAAAGCTGGCCTTACATTGGGTCTTTTCTTGGATTCATTCAAGTATTAAGGTATCAGGTGTCAACTCTTTTGAAGGCAGGGCCTTGAATTATAGTGAGGCAATTTAAGACGTTGCTGGAATGTACATTGGATTAGATATGAGGATTTTCTGGATCTGTTTCAGGGCAGCTACATTCTGAAAGAGATGAATGTATATTGTGGATTCACAAACAATATAGAAAAACAGCACTTGCTCTGTTCATCGAAACATGTAATATACTTCGTAGATGCTAAACTTATCAGGAAACACTGATACAAAGCGAACAAAGCATGTATAGAAAAGGCGAATTTTATGTTCCTTACTTTCTACTTGTTGTTAGTTGATGACTTGATTTTTATATGCTGCTTTTCTTTGTGTAAAGATGAACACAAGTTCCCTGGTATCTAAGCATATTCAAAATATGTATTGTACATATTGTAAAGTTGATATTCAAAACTGGAAGTCACAGTTTGAGTTACTAAATTTGGATAGTTGACTTGCCTGT

Coding sequence (CDS)

ATGATACTGACATTTGGAACTAGATTCCGGCAATGTTCGACAAATGTGTTATCGACCTCCATCAAGATTTCGAGCTTAAGGTTTTCTATTAAAAACCTTGTTGCTTCACTTCAGAAAGTGGCTTTCTATGGTGGCAATGGGGCTCATTTTGGACTATCTTTCCTTCAAACAAGAGAGCTCAGTATGATTGGTAGTTGCAAGAGAACAGACTGGTCAATAAAGAGCAGTGCAGATGGCAGAGGACTGGATCCTCTAACCGGTAGTGGTGATGGAAGAACTCGATTACTTAAAACAATTCAGAGTCTACAGATTAGATTAAATGCAAGGATCCAAGATTTTCGGAAAGATCTTCCTAAAAAGTTTCTATTTTTCTTGGTGGGATTTTATTGTGCAACCGCATTTGCTACCGTGATTGGGCAAACAGGTGATTGGGACATTATGTCTGCTGCGGTGGCTGTTGCTGTGGTGGAGGGTATTGGGGCTCTTATGTACAAAGTTTCTGTACCTTTGCTTGACAGGACCAGGAATCTTATTGTTCTGTTTAATTACTGGAAAGCTGGCCTTACATTGGGTCTTTTCTTGGATTCATTCAAGTATTAA

Protein sequence

MILTFGTRFRQCSTNVLSTSIKISSLRFSIKNLVASLQKVAFYGGNGAHFGLSFLQTRELSMIGSCKRTDWSIKSSADGRGLDPLTGSGDGRTRLLKTIQSLQIRLNARIQDFRKDLPKKFLFFLVGFYCATAFATVIGQTGDWDIMSAAVAVAVVEGIGALMYKVSVPLLDRTRNLIVLFNYWKAGLTLGLFLDSFKY

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
Spo08645	Spo08645	gene

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
Spo08645.1	Spo08645.1-protein	polypeptide

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Spo08645.1.exon.1	Spo08645.1.exon.1	exon
Spo08645.1.exon.2	Spo08645.1.exon.2	exon
Spo08645.1.exon.3	Spo08645.1.exon.3	exon
Spo08645.1.exon.4	Spo08645.1.exon.4	exon
Spo08645.1.exon.5	Spo08645.1.exon.5	exon

The following five_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Spo08645.1.utr5p.1	Spo08645.1.utr5p.1	five_prime_UTR
Spo08645.1.utr5p.2	Spo08645.1.utr5p.2	five_prime_UTR

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Spo08645.1.CDS.1	Spo08645.1.CDS.1	CDS
Spo08645.1.CDS.2	Spo08645.1.CDS.2	CDS
Spo08645.1.CDS.3	Spo08645.1.CDS.3	CDS

The following three_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Spo08645.1.utr3p.1	Spo08645.1.utr3p.1	three_prime_UTR
Spo08645.1.utr3p.2	Spo08645.1.utr3p.2	three_prime_UTR

Homology

[Close]

BLAST of Spo08645.1 vs. NCBI nr
Match: gi|902091486|gb|KNA03343.1| (hypothetical protein SOVF_210090 [Spinacia oleracea])

HSP 1 Score: 388.7 bits (997), Expect = 6.300e-105
Identity = 199/199 (100.00%), Postives = 199/199 (100.00%), Query Frame = 1


		  
Query: 1   MILTFGTRFRQCSTNVLSTSIKISSLRFSIKNLVASLQKVAFYGGNGAHFGLSFLQTREL 60
           MILTFGTRFRQCSTNVLSTSIKISSLRFSIKNLVASLQKVAFYGGNGAHFGLSFLQTREL
Sbjct: 1   MILTFGTRFRQCSTNVLSTSIKISSLRFSIKNLVASLQKVAFYGGNGAHFGLSFLQTREL 60

Query: 61  SMIGSCKRTDWSIKSSADGRGLDPLTGSGDGRTRLLKTIQSLQIRLNARIQDFRKDLPKK 120
           SMIGSCKRTDWSIKSSADGRGLDPLTGSGDGRTRLLKTIQSLQIRLNARIQDFRKDLPKK
Sbjct: 61  SMIGSCKRTDWSIKSSADGRGLDPLTGSGDGRTRLLKTIQSLQIRLNARIQDFRKDLPKK 120

Query: 121 FLFFLVGFYCATAFATVIGQTGDWDIMSAAVAVAVVEGIGALMYKVSVPLLDRTRNLIVL 180
           FLFFLVGFYCATAFATVIGQTGDWDIMSAAVAVAVVEGIGALMYKVSVPLLDRTRNLIVL
Sbjct: 121 FLFFLVGFYCATAFATVIGQTGDWDIMSAAVAVAVVEGIGALMYKVSVPLLDRTRNLIVL 180

Query: 181 FNYWKAGLTLGLFLDSFKY 200
           FNYWKAGLTLGLFLDSFKY
Sbjct: 181 FNYWKAGLTLGLFLDSFKY 199

[Close]

BLAST of Spo08645.1 vs. NCBI nr
Match: gi|731361157|ref|XP_010692203.1| (PREDICTED: ycf20-like protein [Beta vulgaris subsp. vulgaris])

HSP 1 Score: 252.3 bits (643), Expect = 7.100e-64
Identity = 134/199 (67.34%), Postives = 151/199 (75.88%), Query Frame = 1


		  
Query: 1   MILTFGTRFRQCSTNVLSTSIKISSLRFSIKNLVASLQKVAFYGGNGAHFGLSFLQTREL 60
           MIL FGTR  QC  NV+  +     LR+ +                      S +Q +EL
Sbjct: 1   MILYFGTRLHQCPNNVMMFT-PTKYLRYIV----------------------SSIQVKEL 60

Query: 61  SMIGSCKRTDWSIKSSADGRGLDPLTGSGDGRTRLLKTIQSLQIRLNARIQDFRKDLPKK 120
           +     +R  WSI+SSADGRG DPL+G+GDGRTRLLK IQ+LQIRLNARIQDFRKDLP+K
Sbjct: 61  NCSCKSRRRGWSIRSSADGRGFDPLSGTGDGRTRLLKAIQTLQIRLNARIQDFRKDLPRK 120

Query: 121 FLFFLVGFYCATAFATVIGQTGDWDIMSAAVAVAVVEGIGALMYKVSVPLLDRTRNLIVL 180
           F FFLVGFYCATAFATVIGQTGDWDI+SAAVAVAVVEGIGALMYKVSVPLLDR+RNLI +
Sbjct: 121 FFFFLVGFYCATAFATVIGQTGDWDILSAAVAVAVVEGIGALMYKVSVPLLDRSRNLIAI 176

Query: 181 FNYWKAGLTLGLFLDSFKY 200
           FNYWKAGLT+GLFLDSFKY
Sbjct: 181 FNYWKAGLTMGLFLDSFKY 176

[Close]

BLAST of Spo08645.1 vs. NCBI nr
Match: gi|225453999|ref|XP_002274644.1| (PREDICTED: ycf20-like protein [Vitis vinifera])

HSP 1 Score: 204.9 bits (520), Expect = 1.300e-49
Identity = 111/202 (54.95%), Postives = 140/202 (69.31%), Query Frame = 1


		  
Query: 1   MILTFGTRFRQCST--NVLSTSIKISSLRFSIKNLVASLQKVAFYGGNGAHFGLSFLQTR 60
           M+L  G   R  ++  ++   S K  S R+ +  +V  L K +F        GL F +  
Sbjct: 1   MVLGLGLSRRMVASPYHLTHASPKWVSSRYPVVGIVTCLHKTSF--------GLCFFRVA 60

Query: 61  ELSMIGSCKRTDWSIKSSADGRGLDPLTGSG-DGRTRLLKTIQSLQIRLNARIQDFRKDL 120
           +LS++ + KR  WS++SS DG  LDP   +G DGRTRL++ IQ +QI+L+ RI + RKDL
Sbjct: 61  QLSLVNTSKRMVWSVRSSVDGNSLDPTPTNGTDGRTRLVRVIQGIQIKLSTRILELRKDL 120

Query: 121 PKKFLFFLVGFYCATAFATVIGQTGDWDIMSAAVAVAVVEGIGALMYKVSVPLLDRTRNL 180
           P K LFFLVGFYCATAFATVIGQTGDWDI+SAA+AV VVE IGALMY+ S+ L D+ R L
Sbjct: 121 PMKILFFLVGFYCATAFATVIGQTGDWDILSAALAVFVVELIGALMYRASIHLFDKVRRL 180

Query: 181 IVLFNYWKAGLTLGLFLDSFKY 200
           I +FNYWKAGL LGLFLDSFKY
Sbjct: 181 ITMFNYWKAGLCLGLFLDSFKY 194

[Close]

BLAST of Spo08645.1 vs. NCBI nr
Match: gi|296089191|emb|CBI38894.3| (unnamed protein product [Vitis vinifera])

HSP 1 Score: 204.9 bits (520), Expect = 1.300e-49
Identity = 111/202 (54.95%), Postives = 140/202 (69.31%), Query Frame = 1


		  
Query: 1   MILTFGTRFRQCST--NVLSTSIKISSLRFSIKNLVASLQKVAFYGGNGAHFGLSFLQTR 60
           M+L  G   R  ++  ++   S K  S R+ +  +V  L K +F        GL F +  
Sbjct: 27  MVLGLGLSRRMVASPYHLTHASPKWVSSRYPVVGIVTCLHKTSF--------GLCFFRVA 86

Query: 61  ELSMIGSCKRTDWSIKSSADGRGLDPLTGSG-DGRTRLLKTIQSLQIRLNARIQDFRKDL 120
           +LS++ + KR  WS++SS DG  LDP   +G DGRTRL++ IQ +QI+L+ RI + RKDL
Sbjct: 87  QLSLVNTSKRMVWSVRSSVDGNSLDPTPTNGTDGRTRLVRVIQGIQIKLSTRILELRKDL 146

Query: 121 PKKFLFFLVGFYCATAFATVIGQTGDWDIMSAAVAVAVVEGIGALMYKVSVPLLDRTRNL 180
           P K LFFLVGFYCATAFATVIGQTGDWDI+SAA+AV VVE IGALMY+ S+ L D+ R L
Sbjct: 147 PMKILFFLVGFYCATAFATVIGQTGDWDILSAALAVFVVELIGALMYRASIHLFDKVRRL 206

Query: 181 IVLFNYWKAGLTLGLFLDSFKY 200
           I +FNYWKAGL LGLFLDSFKY
Sbjct: 207 ITMFNYWKAGLCLGLFLDSFKY 220

[Close]

BLAST of Spo08645.1 vs. NCBI nr
Match: gi|698435386|ref|XP_009800342.1| (PREDICTED: ycf20-like protein [Nicotiana sylvestris])

HSP 1 Score: 196.8 bits (499), Expect = 3.500e-47
Identity = 105/169 (62.13%), Postives = 127/169 (75.15%), Query Frame = 1


		  
Query: 32  NLVASLQKVAFYGGNGAHFGLSFLQTRELSMIGSCKRTDWSIKSSADGRGLDPL-TGSGD 91
           N    L++ A   G   HF LSFL   + S   + KR  WSI+S+ADG GL+   T SG 
Sbjct: 27  NGTVCLRRAAHSLGRLMHFQLSFLNIVQPSSFRNFKRLAWSIRSAADGNGLNSSPTTSGS 86

Query: 92  GRTRLLKTIQSLQIRLNARIQDFRKDLPKKFLFFLVGFYCATAFATVIGQTGDWDIMSAA 151
           G TRL++ I++L ++L+ARI+  RK+LP K LFFLVGFYCATAFATVIGQTGDWDI+SA 
Sbjct: 87  GGTRLIRAIEALLVKLDARIKVLRKNLPVKLLFFLVGFYCATAFATVIGQTGDWDIISAG 146

Query: 152 VAVAVVEGIGALMYKVSVPLLDRTRNLIVLFNYWKAGLTLGLFLDSFKY 200
           +AVAVVEGIGALMY+ S+PLLD  R+ I +FNYWK GLTLGLFLDSFKY
Sbjct: 147 LAVAVVEGIGALMYR-SIPLLDEVRSFITMFNYWKTGLTLGLFLDSFKY 194

[Close]

BLAST of Spo08645.1 vs. UniProtKB/TrEMBL
Match: A0A0K9Q9H4_SPIOL (Uncharacterized protein OS=Spinacia oleracea GN=SOVF_210090 PE=4 SV=1)

HSP 1 Score: 388.7 bits (997), Expect = 4.400e-105
Identity = 199/199 (100.00%), Postives = 199/199 (100.00%), Query Frame = 1


		  
Query: 1   MILTFGTRFRQCSTNVLSTSIKISSLRFSIKNLVASLQKVAFYGGNGAHFGLSFLQTREL 60
           MILTFGTRFRQCSTNVLSTSIKISSLRFSIKNLVASLQKVAFYGGNGAHFGLSFLQTREL
Sbjct: 1   MILTFGTRFRQCSTNVLSTSIKISSLRFSIKNLVASLQKVAFYGGNGAHFGLSFLQTREL 60

Query: 61  SMIGSCKRTDWSIKSSADGRGLDPLTGSGDGRTRLLKTIQSLQIRLNARIQDFRKDLPKK 120
           SMIGSCKRTDWSIKSSADGRGLDPLTGSGDGRTRLLKTIQSLQIRLNARIQDFRKDLPKK
Sbjct: 61  SMIGSCKRTDWSIKSSADGRGLDPLTGSGDGRTRLLKTIQSLQIRLNARIQDFRKDLPKK 120

Query: 121 FLFFLVGFYCATAFATVIGQTGDWDIMSAAVAVAVVEGIGALMYKVSVPLLDRTRNLIVL 180
           FLFFLVGFYCATAFATVIGQTGDWDIMSAAVAVAVVEGIGALMYKVSVPLLDRTRNLIVL
Sbjct: 121 FLFFLVGFYCATAFATVIGQTGDWDIMSAAVAVAVVEGIGALMYKVSVPLLDRTRNLIVL 180

Query: 181 FNYWKAGLTLGLFLDSFKY 200
           FNYWKAGLTLGLFLDSFKY
Sbjct: 181 FNYWKAGLTLGLFLDSFKY 199

[Close]

BLAST of Spo08645.1 vs. UniProtKB/TrEMBL
Match: A0A0J8BGG1_BETVU (Uncharacterized protein OS=Beta vulgaris subsp. vulgaris GN=BVRB_1g018850 PE=4 SV=1)

HSP 1 Score: 252.3 bits (643), Expect = 4.900e-64
Identity = 134/199 (67.34%), Postives = 151/199 (75.88%), Query Frame = 1


		  
Query: 1   MILTFGTRFRQCSTNVLSTSIKISSLRFSIKNLVASLQKVAFYGGNGAHFGLSFLQTREL 60
           MIL FGTR  QC  NV+  +     LR+ +                      S +Q +EL
Sbjct: 1   MILYFGTRLHQCPNNVMMFT-PTKYLRYIV----------------------SSIQVKEL 60

Query: 61  SMIGSCKRTDWSIKSSADGRGLDPLTGSGDGRTRLLKTIQSLQIRLNARIQDFRKDLPKK 120
           +     +R  WSI+SSADGRG DPL+G+GDGRTRLLK IQ+LQIRLNARIQDFRKDLP+K
Sbjct: 61  NCSCKSRRRGWSIRSSADGRGFDPLSGTGDGRTRLLKAIQTLQIRLNARIQDFRKDLPRK 120

Query: 121 FLFFLVGFYCATAFATVIGQTGDWDIMSAAVAVAVVEGIGALMYKVSVPLLDRTRNLIVL 180
           F FFLVGFYCATAFATVIGQTGDWDI+SAAVAVAVVEGIGALMYKVSVPLLDR+RNLI +
Sbjct: 121 FFFFLVGFYCATAFATVIGQTGDWDILSAAVAVAVVEGIGALMYKVSVPLLDRSRNLIAI 176

Query: 181 FNYWKAGLTLGLFLDSFKY 200
           FNYWKAGLT+GLFLDSFKY
Sbjct: 181 FNYWKAGLTMGLFLDSFKY 176

[Close]

BLAST of Spo08645.1 vs. UniProtKB/TrEMBL
Match: A0A059C452_EUCGR (Uncharacterized protein OS=Eucalyptus grandis GN=EUGRSUZ_E01444 PE=4 SV=1)

HSP 1 Score: 195.3 bits (495), Expect = 7.200e-47
Identity = 102/190 (53.68%), Postives = 130/190 (68.42%), Query Frame = 1


		  
Query: 17  LSTSIKISSLRF-----SIKNLVASLQKVAFYGGNGAHFGLSFLQTRELSMIGSCKRTDW 76
           +  ++K+SSLR+     ++  L       A+  G      +  L     S++   K   W
Sbjct: 11  MPANVKLSSLRYPWSGVAVVGLAGCFHTAAYAFGQKLRSQIYILHVTRPSLVNDFKNMTW 70

Query: 77  SIKSSADGRGLD--PLTGSGDGRTRLLKTIQSLQIRLNARIQDFRKDLPKKFLFFLVGFY 136
           +I+SSADGRGLD  P T S +G TRL++ I+  Q +L+A++Q  RK+ P K LFFLVGFY
Sbjct: 71  AIRSSADGRGLDLDPSTDSTNGTTRLIRAIRDFQNKLSAKVQQIRKNFPMKLLFFLVGFY 130

Query: 137 CATAFATVIGQTGDWDIMSAAVAVAVVEGIGALMYKVSVPLLDRTRNLIVLFNYWKAGLT 196
           CATAFATVIGQTGDWDI+SAA+AV VVEGIGALMY  S P+  R R+LI +FNYWKAGL+
Sbjct: 131 CATAFATVIGQTGDWDILSAALAVVVVEGIGALMYSASQPVFSRARSLISMFNYWKAGLS 190

Query: 197 LGLFLDSFKY 200
           LGLFLDSFKY
Sbjct: 191 LGLFLDSFKY 200

[Close]

BLAST of Spo08645.1 vs. UniProtKB/TrEMBL
Match: A0A067HDA0_CITSI (Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g027310mg PE=4 SV=1)

HSP 1 Score: 193.4 bits (490), Expect = 2.700e-46
Identity = 101/179 (56.42%), Postives = 122/179 (68.16%), Query Frame = 1


		  
Query: 22  KISSLRFSIKNLVASLQKVAFYGGNGAHFGLSFLQTRELSMIGSCKRTDWSIKSSADGRG 81
           K    R  I  + A   K +   G   H     +   +   + + K+  W+I SS D  G
Sbjct: 24  KYDRRRVGIVVVAACFHKYSSAFGQKLHPRCFLVHVAQPYFVNNLKKMSWAIGSSVDDNG 83

Query: 82  LDPLTG-SGDGRTRLLKTIQSLQIRLNARIQDFRKDLPKKFLFFLVGFYCATAFATVIGQ 141
            DP +  S +GRTRL++ IQ+ Q R+ ARIQ+ RKD P K LFFLVGFYCATAFATVIGQ
Sbjct: 84  FDPSSSDSSNGRTRLIRVIQAFQTRIGARIQELRKDFPTKLLFFLVGFYCATAFATVIGQ 143

Query: 142 TGDWDIMSAAVAVAVVEGIGALMYKVSVPLLDRTRNLIVLFNYWKAGLTLGLFLDSFKY 200
           TGDWDI+SAA+AV VVEGIGALMY+ S+ LL + RNLI +FNYWKAGLTLGLFLDSFKY
Sbjct: 144 TGDWDILSAALAVVVVEGIGALMYRASLRLLSKIRNLITMFNYWKAGLTLGLFLDSFKY 202

[Close]

BLAST of Spo08645.1 vs. UniProtKB/TrEMBL
Match: A0A0D2RCQ1_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_005G116300 PE=4 SV=1)

HSP 1 Score: 191.0 bits (484), Expect = 1.300e-45
Identity = 102/193 (52.85%), Postives = 132/193 (68.39%), Query Frame = 1


		  
Query: 12  CSTNVLSTSIKIS-SLRFSIKNLVASLQKVAFYGG----NGAHFGLSFLQTRELSMIGSC 71
           CS+  ++T+ ++S +  FSI  L  S       G     N   FG           + + 
Sbjct: 75  CSSQAMTTTTRLSRNANFSIFKLSNSSDAALNLGPCSHKNVCFFGWKLHSQPCFIHVNNF 134

Query: 72  KRTDWSIKSSADGRGLDPLTGSGDGRTRLLKTIQSLQIRLNARIQDFRKDLPKKFLFFLV 131
           ++ +WS++S+ D  G DP + +G GR RL++ IQ +Q +L  RIQ+ RK+LP K LFFLV
Sbjct: 135 RKMEWSVRSNVDASGFDPSSSNG-GRPRLIRAIQGIQTKLGVRIQELRKNLPMKILFFLV 194

Query: 132 GFYCATAFATVIGQTGDWDIMSAAVAVAVVEGIGALMYKVSVPLLDRTRNLIVLFNYWKA 191
           GFYCATAFAT IGQTGDWDI+SAA+AV VVEGIGALMY+ S+PLL+  RNLI +FNYWKA
Sbjct: 195 GFYCATAFATFIGQTGDWDILSAALAVFVVEGIGALMYRASLPLLNNVRNLITIFNYWKA 254

Query: 192 GLTLGLFLDSFKY 200
           GL+LGLFLDSFKY
Sbjct: 255 GLSLGLFLDSFKY 266

[Close]

BLAST of Spo08645.1 vs. ExPASy Swiss-Prot
Match: YC20L_ARATH (Ycf20-like protein OS=Arabidopsis thaliana GN=At1g65420 PE=2 SV=2)

HSP 1 Score: 99.4 bits (246), Expect = 4.800e-20
Identity = 51/113 (45.13%), Postives = 72/113 (63.72%), Query Frame = 1


		  
Query: 88  SGDGRTRLLKTIQSLQIRLNARIQDFRKDLPKKFLFFLVGFYCATAFATVIGQTGDWDIM 147
           +G G TRL +   +   +L  +I   RK+ P K    L+GFY A A AT++GQTGDWD++
Sbjct: 82  TGLGSTRLGRIAIAGGKQLLGKINSARKNFPMKIFLLLLGFYTANALATILGQTGDWDVL 141

Query: 148 SAAVAVAVVEGIGALMYK--VSVPLLDRTRNLIVLFNYWKAGLTLGLFLDSFK 199
            A + VA +EGIG LMYK   S     + ++ +V  N+WKAG+ LGLF+D+FK
Sbjct: 142 VAGIVVAAIEGIGMLMYKKPSSSMFSGKLQSFVVFMNFWKAGVCLGLFVDAFK 194

[Close]

BLAST of Spo08645.1 vs. ExPASy Swiss-Prot
Match: YCF20_MESVI (Uncharacterized protein ycf20 OS=Mesostigma viride GN=ycf20 PE=3 SV=1)

HSP 1 Score: 77.4 bits (189), Expect = 2.000e-13
Identity = 43/110 (39.09%), Postives = 65/110 (59.09%), Query Frame = 1


		  
Query: 93  TRLLKTIQSLQIRLNARIQDFRKDLPKKFLFFLVGFYCATAFATVIGQTGDWDIMSAAVA 152
           TRL     ++   L+++IQ++  + P K L  L+GF+ AT  ATV GQTGDWD++ A + 
Sbjct: 4   TRLTLFFTNIFQLLDSKIQNYSINFPIKILLLLLGFFIATVLATVFGQTGDWDVLVAGIL 63

Query: 153 VAVVEGIGALMYKVSV----PLLDRTRNLIVLFNYWKAGLTLGLFLDSFK 199
           VA++E +G  MY         + D +   ++  NY K GL  GLF+D+FK
Sbjct: 64  VAMIEILGNKMYSKKYISKKQVFDISFLSLIGINYIKIGLIFGLFVDAFK 113

[Close]

BLAST of Spo08645.1 vs. ExPASy Swiss-Prot
Match: YCF20_PYRYE (Uncharacterized protein ycf20 OS=Pyropia yezoensis GN=ycf20 PE=3 SV=1)

HSP 1 Score: 61.6 bits (148), Expect = 1.100e-8
Identity = 38/107 (35.51%), Postives = 59/107 (55.14%), Query Frame = 1


		  
Query: 92  RTRLLKTIQSLQIRLNARIQDFRKDLPKKFLFFLVGFYCATAFATVIGQTGDWDIMSAAV 151
           +TRL      L   LN ++     +L    +  L+GF+ +T  +T+ GQTGDW I++A++
Sbjct: 3   KTRLSTFFAYLIKNLNNKLYYSLSELTTGLISLLLGFFISTGLSTIPGQTGDWGIIAASL 62

Query: 152 AVAVVEGIGALMYKVSVPLLDRTRNLIVLFNYWKAGLTLGLFLDSFK 199
            VA  E    ++Y     L  +    I LFN +K G+T GLF+D+FK
Sbjct: 63  IVAATELTSKIVYSSHKQLNIK----INLFNNFKIGITYGLFVDAFK 105

[Close]

BLAST of Spo08645.1 vs. ExPASy Swiss-Prot
Match: YCF20_PORPU (Uncharacterized protein ycf20 OS=Porphyra purpurea GN=ycf20 PE=3 SV=1)

HSP 1 Score: 58.5 bits (140), Expect = 9.400e-8
Identity = 36/107 (33.64%), Postives = 58/107 (54.21%), Query Frame = 1


		  
Query: 92  RTRLLKTIQSLQIRLNARIQDFRKDLPKKFLFFLVGFYCATAFATVIGQTGDWDIMSAAV 151
           RT+L          L++R+     +L    +  L+GF+ +T  +T+ GQTGDW I++A++
Sbjct: 3   RTKLSIFFSYFVQNLSSRLYYSLNELTAGLISLLLGFFISTGLSTIPGQTGDWGIIAASL 62

Query: 152 AVAVVEGIGALMYKVSVPLLDRTRNLIVLFNYWKAGLTLGLFLDSFK 199
            VA +E +  ++Y        R    I L N  K G+T GLF+D+FK
Sbjct: 63  IVAAIELVSKIVYSNKKKYGVR----INLLNNLKIGITYGLFVDAFK 105

[Close]

BLAST of Spo08645.1 vs. ExPASy Swiss-Prot
Match: YCF20_CYACA (Uncharacterized protein ycf20 OS=Cyanidium caldarium GN=ycf20 PE=3 SV=1)

HSP 1 Score: 52.4 bits (124), Expect = 6.700e-6
Identity = 27/75 (36.00%), Postives = 43/75 (57.33%), Query Frame = 1


		  
Query: 124 FLVGFYCATAFATVIGQTGDWDIMSAAVAVAVVEGIGALMYKVSVPLLDRTRNLIVLFNY 183
           FL GF+ ++A +T++ QT +W I++AA+ +++VE    L +K          N     N 
Sbjct: 24  FLFGFFLSSATSTILIQTNEWSILTAAILISIVELFNYLKHKFQFNDRKSGYNCFFFINL 83

Query: 184 WKAGLTLGLFLDSFK 199
            K GL  GLF+D+FK
Sbjct: 84  AKLGLLYGLFIDAFK 98

[Close]

BLAST of Spo08645.1 vs. TAIR (Arabidopsis)
Match: AT3G56830.1 (Protein of unknown function (DUF565))

HSP 1 Score: 160.2 bits (404), Expect = 1.300e-39
Identity = 82/151 (54.30%), Postives = 106/151 (70.20%), Query Frame = 1


		  
Query: 54  FLQTRELSMIGSCKRTDWS-IKSSADGRGLDPLTGSGDGRT----RLLKTIQSLQIRLNA 113
           FL   +  ++   +R  W+ IKSS  G   DP +GS    +    RL+K IQ L+ +L  
Sbjct: 38  FLHPAQPLLVRHQRRMSWTTIKSSVGGDRFDPASGSSSNNSSRGLRLIKAIQVLRSKLLV 97

Query: 114 RIQDFRKDLPKKFLFFLVGFYCATAFATVIGQTGDWDIMSAAVAVAVVEGIGALMYKVSV 173
           +IQ+ +KDLPKK  F LVGFY ATAF+T IGQTGDWD++SA +AV VVE IGALMY+ S+
Sbjct: 98  KIQEIKKDLPKKLFFLLVGFYSATAFSTFIGQTGDWDVLSAGLAVLVVECIGALMYRASI 157

Query: 174 PLLDRTRNLIVLFNYWKAGLTLGLFLDSFKY 200
           PL+++ R+ I +FNYWK GL LGLFLDSFKY
Sbjct: 158 PLINKMRSTITMFNYWKTGLALGLFLDSFKY 188

[Close]

BLAST of Spo08645.1 vs. TAIR (Arabidopsis)
Match: AT1G65420.1 (Protein of unknown function (DUF565))

HSP 1 Score: 99.4 bits (246), Expect = 2.700e-21
Identity = 51/113 (45.13%), Postives = 72/113 (63.72%), Query Frame = 1


		  
Query: 88  SGDGRTRLLKTIQSLQIRLNARIQDFRKDLPKKFLFFLVGFYCATAFATVIGQTGDWDIM 147
           +G G TRL +   +   +L  +I   RK+ P K    L+GFY A A AT++GQTGDWD++
Sbjct: 82  TGLGSTRLGRIAIAGGKQLLGKINSARKNFPMKIFLLLLGFYTANALATILGQTGDWDVL 141

Query: 148 SAAVAVAVVEGIGALMYK--VSVPLLDRTRNLIVLFNYWKAGLTLGLFLDSFK 199
            A + VA +EGIG LMYK   S     + ++ +V  N+WKAG+ LGLF+D+FK
Sbjct: 142 VAGIVVAAIEGIGMLMYKKPSSSMFSGKLQSFVVFMNFWKAGVCLGLFVDAFK 194

The following BLAST results are available for this feature:

BLAST of Spo08645.1 vs. NCBI nr
BLAST of Spo08645.1 vs. UniProtKB/TrEMBL
BLAST of Spo08645.1 vs. ExPASy Swiss-Prot
BLAST of Spo08645.1 vs. TAIR (Arabidopsis)

BLAST of Spo08645.1 vs. NCBI nr
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. NCBI nr)
Total hits: 5


Match Name	E-value	Identity	Description
gi\|902091486\|gb\|KNA03343.1\|	6.3e-105	100.	hypothetical protein SOVF_2100...	[more]
gi\|731361157\|ref\|XP_010692203.1\|	7.1e-64	67.3	PREDICTED: ycf20-like protein ...	[more]
gi\|225453999\|ref\|XP_002274644.1\|	1.3e-49	54.9	PREDICTED: ycf20-like protein ...	[more]
gi\|296089191\|emb\|CBI38894.3\|	1.3e-49	54.9	unnamed protein product [Vitis...	[more]
gi\|698435386\|ref\|XP_009800342.1\|	3.5e-47	62.1	PREDICTED: ycf20-like protein ...	[more]

BLAST of Spo08645.1 vs. UniProtKB/TrEMBL
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. UniprotKB/TrEMBL)
Total hits: 5


Match Name	E-value	Identity	Description
A0A0K9Q9H4_SPIOL	4.4e-105	100.	Uncharacterized protein OS=Spi...	[more]
A0A0J8BGG1_BETVU	4.9e-64	67.3	Uncharacterized protein OS=Bet...	[more]
A0A059C452_EUCGR	7.2e-47	53.6	Uncharacterized protein OS=Euc...	[more]
A0A067HDA0_CITSI	2.7e-46	56.4	Uncharacterized protein OS=Cit...	[more]
A0A0D2RCQ1_GOSRA	1.3e-45	52.8	Uncharacterized protein OS=Gos...	[more]

BLAST of Spo08645.1 vs. ExPASy Swiss-Prot
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. ExPASy SwissProt)
Total hits: 5


Match Name	E-value	Identity	Description
YC20L_ARATH	4.8e-20	45.1	Ycf20-like protein OS=Arabidop...	[more]
YCF20_MESVI	2.0e-13	39.0	Uncharacterized protein ycf20 ...	[more]
YCF20_PYRYE	1.1e-8	35.5	Uncharacterized protein ycf20 ...	[more]
YCF20_PORPU	9.4e-8	33.6	Uncharacterized protein ycf20 ...	[more]
YCF20_CYACA	6.7e-6	36.0	Uncharacterized protein ycf20 ...	[more]

BLAST of Spo08645.1 vs. TAIR (Arabidopsis)
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. TAIR)
Total hits: 2


Match Name	E-value	Identity	Description
AT3G56830.1	1.3e-39	54.3	Protein of unknown function (D...	[more]
AT1G65420.1	2.7e-21	45.1	Protein of unknown function (D...	[more]

InterPro

Analysis Name: InterPro Annotations of S. oleracea
Date Performed: 2018-06-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR007572	Uncharacterised protein family Ycf20	PFAM	PF04483	DUF565	coord: 140..198 score: 5.0
None	No IPR available	PANTHER	PTHR33787	FAMILY NOT NAMED	coord: 49..199 score: 1.2
None	No IPR available	PANTHER	PTHR33787:SF3	SUBFAMILY NOT NAMED	coord: 49..199 score: 1.2