Spo23610.1 (mRNA)

Overview
NameSpo23610.1
TypemRNA
OrganismSpinacia oleracea (Spinach)
DescriptionTransmembrane protein 50a, putative
Locationchr2 : 51398697 .. 51404102 (-)
Sequence length1171
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
GCCCGACCACTTGATCTTGAAGGTGATAAGTCGCAACAAATATCTTTTGAATTCCATGCATGTCTTATATTTTTTCCCCTTATAAGCATCACAATCTTACTCTTTACCGACTCACGTTGCGTTTAGCCGTTTAGGGGTCACAAAATGACACTGAAGTAAAAGTTCTCAACAACACCTTATTCTTAAATCTTAATAAGCCTGTTGACAACAAGTAGAAGAAAAACCCATCAATCATTCCCATTTCCCAGCTTCCACTACACGTAAAACCAAACAAAAGAATGGATATACCGGAGCTACTTGCAATATTCGGGCCGGGTATCGCCGGCGCCGTATTCGGGGCGGGCTGGTGGTTTTGGGTTGACGCCGTGGTTTGCAGCTCCATCGTCGTCTCTTTCGTCCACTATCTCCCTGGTATCTCTCTCTCTTTCTTTTCTCTCTCCTCAATCTTTCTCCCCCCAAAACTCACTGATTTTAGGGTTTCTGCTTTGGTAATGTTTTTGATTAGGAATATTTGCATCTTTGGCGGCTTTGATGTTCAATTGTGTGAGGAAAGAAGACATCGATTACTCCCCTTACGATGATGGGGAGTGGAGGTATTTTTCCTTTTCTTTGAATCAAACTTCTGACTTTTTGATTTTCTATTGCAATTCGTAGTGTTTTTAGTGTTGTGTCTAATTTGATTGCTCAATGCCATAATTTTTTTATGCTGAAGTGTTTGATTTGATGATGATGATCAGAGATTTTGGCTTTGATGTTATTCTCATCATCTGATCATATATTAGAGTGGTTTATTGTAATCGTATGATCTTATCTGCATATATTAGAGTGTTTTATTGTAATCATATGATCTTATCTACATATTGGTTCTGCTTGAAAAACAGATACTTTTTTGTTTCACTCTTCTTTATCTTATCATCATTTTCGAAATTCTCTGATCACAGATACGTCCCTCGTGGATTGTGGTCACAGTAGGGAAATTTGATTAATTTTACTTTGTTGGCAAATGAGTACTTTGTTTTATGGAGTTGTGGGTTGGTTTAGGTCTCCTGTAGAAAAGATTGTTGGATGGGTATCGTCGATGATGGTAGAGTTATGTTTATAGATACTGAAACGTAGCTTGCAGCGAACTAGGATAATTACTTCTATGAGTAATCTTTTATAATTAATTGACATGGGATGGAAGTATGGAATTGAAGAGAAATGAATTGATGGGGTGGAAATGCTTGCTTATCTTATAGACTGGTAGCTATTAGCTAGACAGAATGTGGTAGAACTATTGGAATGTGTATTGCTGCTTGCATGTGAAATTTTGGATATCAACTCAGCTGCTACTGCTAGCCTATAACTATTTTAATATGCTTATATGTTCTTCTAAACGATATCGCAGATTGAAGCTCTGGCTTTTCCTTGCTTATGTCGTATCTTTTGTGTCACTTGCGGCATCAGTTGGGCTGCTTATACAAGATGCCATGTTGCCTTCTGGACCATCAACATGGACTGGGGTTGCGGGTGTCTTGCAGTGTGTATTTGTGCTGATTAGGTTGGTATTGTTTTTCTGACATTCAATTTACTTTCTTTTCTGTCAATTTTATTTGTATGCATTTGACACATTTTGATGCTCCATTTTGGCATTTTTTGAAGTATACATCTTCCTCGCACTGTTTTATACCCTTCCTCCCAAAGAAAATGCATAATTTGAAACTTGGGATTGCTTTCTTTGTTTTAGACTCATTATGTGGTTATAGAACTTGGATAACTGGTATGGAGGAAATGGTCATTAAACACATTCTAGCCCACTATGTTAACAAGATAAGAGCTGAGTGTCTGAGTGCTTCAAGTTTAGTTAAGAATGAGGTGCCTTGTCATCTACAACAAGGGAAAATAGTAAAATTGGAAAGTTTTGATTTTTTGGAAGTTAACTTTCAGTTAGTTTAAAATTATATAAAAGATCCATCAAGTTTGGATGATCCTTGACCTTTTAACTTCACTTCTATTTTTAATTTTGAGTGTGTGTGTTGGGAAAGGGGCCTTTAAGTTTGAACTTCACTTACGAATATGCTCTTGTGTTTCTAAGTTCAAAGAATCATCAAGTTTGGGTGATCCTTATATGGATGCACATGCACTTTCAGTCTTACAGACCTTTTAACTTCACTTCTTTTTGTTCTTGTTTTTTTGTTTTGTTTTTTGTGTGTCTAAGTTTGTTTATTTTCCCATGGCTGACTCTTGGTTTTACCTGAATCTAGTACCCGTAACTTGGTGCATAGCATTTGATAGTAGCATAAGAACCAAGATTCATTTCTCTTCTCAAATGTTACTCATGACCAAGAACCCCTTATAAACACCCGTTGAAGATCTCAGTTAAAGTTGCATGAATGCTTCCTAACTTCTTAGCAACATTGTGTTGTTATGTGAGTCATACGACTCGTGTGAAGGCCCCTTTAAGGGTATAAACCCTCTCATGTGATCTTTACTTTGGGTAATCTAAAGCATACTCATAGCAAATTAATGCCTACAAAATTGATTGCATTGGGTAAAATTCATAAGCCATGACTAAAATCATATGCCATGAACTAGTGGAATTCTATTTAACCATGGGAGGGTATTTTTCTTTTTCTTTGGGGGGGGGGGGGGTGGAGGGATTGAAGGGCAATCTCGAGTTGCTGATGTGATGATAGTGGACATGATCTAGTAGTGGTTTTAAGACCCACCTAATAACTCCTGTTAGAAGACCATGATGATTCCCAATAAAAATTGGATAGAAGTCGCGTTGACAGCGAAGAAGCTTCAGATGTTAACTCTTAGTGAACCTTGCCCCTGACAGACTCGTTACAAATTGATGTGCATGAGACACTTTTAGAGTTAGAGAAAACCTCAGTGTGACTTGGAGGGAATTATATATTTTATGAAGATCCCTAGACACTAGTCATAATATAATCTCCTAATGACGGCAGAAAATCTCAAGTGACTTGCTAGAATCATTCTAAAGGTGATATCCTCTAACAATGGCCCTAGATATAAATAGGAACATTTTCTTAATCTTTTTCTAATGGATAATAGGAAAGTCTTCTATCTATAAGTATTTGACCAATCATGCCAGATGTCAACATCCTAGAATGGAGCTTGTTTCAAATTGGTAAGTTAGACTGTAATAGGAGATGCTGAACTCAATAATTCCTAAGAAATTTCCATTTTGAAGGATATAACTTTTGTAGATCTATCTCGAGGCACTAGTAAAGGTTAATAGAATCTTTTGTCCATCAATAGGCAGGTCCTCCGTAGATGAACGTAGCCCATTACTGATCACTTTTCACCAAATTATAAGTCATATATGTAGACCTTTTTCGGGCACAGAATCTTCCATCGAAATTTGTGGCAAACTCTCTTGTGCCATGGTTTCTTAAGTGGTTAATAATGACCATTGGTTGCTTAAGTGGTTAATGATGACCCATGGCTGCTTAAGTGGTTGATAATGACCATTGTTTTCATAAAATGTTTTAGGACCACTGTTAGGTCTAAATGAAGTTTGTAAGAAAGCATCCTTAGATCTAACAGTTGCTACGAATCAAAATTATGGAGAGGGGCACTTTAGGTAGTATCTTAAGTTAGTTATGGGTAGCTTGGGGAATAACTTAGGGAGCTAGCTAGGGAAAGGAGTGTTATATACAGAGCATATTAGAGTTAGGGAAAGGCATGTTTGATTAGAGTATTTCGGGTTAGCTTAGTAAGCTAAATTGGGAGAGAATCCACCTCTCAAAAGTGGAATTGTCATTCACATTTGCTGTAACTTCCATCTTAATCAAATCATCATCTTCATCCAATTTTCTGACATTAATGATGCTCAAGCTATGTTAATTCATAGCAACAACCAATAGATTAATGATGCGAGATTGATGATTCTACCAACAACATTGAGCCCTCTCAATGCGAGATTGTTTGTTTCTTCCCACTTTTATTGTTTTTGGCTTTTCGTTCAACCTTCTAAATAAAATCACTCTTCTATAAAGACTAACATGAAAGGAGGGTATTTTTGGTGATGAAAAAGAAGTCAAAATATATAAAGCCTTTTGCGAAAATATTTCCCTTGTGCGTGCCTTTGCCTCATGACTCACACCTCGACACAGGAAACTTTTTGTGCCTCAGAGTACTCCATGCTTAGCCTTTCCCCATGGGACATTGCTTCCATTCTCTCAAACCAGAGAGTAATTTGAAACTACGAAAGTTTTTTCTTTTTCATTTTTTTGTTTTAGGTCAAGAAATCTCTCTTTGGAGTTTGGAGGAAAATAACATTCTTGCCATATTTCTTTTCACTGTACAAATTGAATTATTTTGGTTAACAATGAAACGAGTTGGCTTTATTGTCTACAATTAGGCGAAATACACGTTTTGTGAATGAACTATGAGAAATTGGATACTTTGTGCCATGTGGAAAGCCTCTACGCTTATAAGGTATTTTCAAGTAATAAATATTTAAGAACACAAATAAGATCCCATCCATTATACTTCATACTCCTCTGTATGATTTCCCTTGTAGGTCCTTTTTACTTTAGTCTATGATGCGTGCTTGTGTATTCTGGCTTCTGCCTGCTTGCTCTAGTAACTGCATGCATTGCCGCTCTGTTAACGTTCACGTTTCCTTTGTCCTGAGTCTATGACTCTCCTGAGACTTCTGATCTTTAAACCTTTGATTGTGTGGTTGAAATACAACTTTGGCGAATCAACAGTCGATATACTTTGTTTACTTTTATCATGCTTGCTCTGCCAAGGGTTTGTTTTGCACTTAGATATCTGCAGTCAATTACTGGGTTACTGGGTTACTGGGTATGTACAACCTATCAAGTCTTTTGTTTGCTCACAATTTGATACATTTTTTTTGTTTTGGTTTGATAGTGGGTTGATCTATTGGACTTCACATTCCGAGTAGCTGGCTACATATTGAAGGTGTTTGAGACTTGTACTTATTTTAACTCGAATGTGCAGTAAAATAGTAGTTCATCTTTGTGTAAATGTTTGTAATATGCAACTGGCTATGAGCAACTAAGACGAGCCTAACTTCAATTTCTGGAATCTCTTGGTTCTTATGCTGTGAGGTGGTGTTTGGTATAATTGTTGAGCATTTCTAGGCTTGGGAATACTACATATAATCTTAAACTTTTATTCTACATAATCTTGTCACTTAAAGCATTATCAAACATATCCGCTTATACTAACTCCGTTTCAAAATGATTTTTACATTTTCCATTGTAGTCTGTTTCATAATGTTCTTTGCATTGTATTTCATACTATTGTTTGACATGAAAATTTACTATTTTACCTTTGTTACTGCAACATTTCTTATACTTCATTCATTTTTTTGTTATACCCACACGCTTTTTGTAAATTTCTCTTATTTTATCCATATTTTATTAT

mRNA sequence

GCCCGACCACTTGATCTTGAAGGTGATAAGTCGCAACAAATATCTTTTGAATTCCATGCATGTCTTATATTTTTTCCCCTTATAAGCATCACAATCTTACTCTTTACCGACTCACGTTGCGTTTAGCCGTTTAGGGGTCACAAAATGACACTGAAGTAAAAGTTCTCAACAACACCTTATTCTTAAATCTTAATAAGCCTGTTGACAACAAGTAGAAGAAAAACCCATCAATCATTCCCATTTCCCAGCTTCCACTACACGTAAAACCAAACAAAAGAATGGATATACCGGAGCTACTTGCAATATTCGGGCCGGGTATCGCCGGCGCCGTATTCGGGGCGGGCTGGTGGTTTTGGGTTGACGCCGTGGTTTGCAGCTCCATCGTCGTCTCTTTCGTCCACTATCTCCCTGGAATATTTGCATCTTTGGCGGCTTTGATGTTCAATTGTGTGAGGAAAGAAGACATCGATTACTCCCCTTACGATGATGGGGAGTGGAGATTGAAGCTCTGGCTTTTCCTTGCTTATGTCGTATCTTTTGTGTCACTTGCGGCATCAGTTGGGCTGCTTATACAAGATGCCATGTTGCCTTCTGGACCATCAACATGGACTGGGGTTGCGGGTGTCTTGCAGTGTGTATTTGTGCTGATTAGTGGGTTGATCTATTGGACTTCACATTCCGAGTAGCTGGCTACATATTGAAGGTGTTTGAGACTTGTACTTATTTTAACTCGAATGTGCAGTAAAATAGTAGTTCATCTTTGTGTAAATGTTTGTAATATGCAACTGGCTATGAGCAACTAAGACGAGCCTAACTTCAATTTCTGGAATCTCTTGGTTCTTATGCTGTGAGGTGGTGTTTGGTATAATTGTTGAGCATTTCTAGGCTTGGGAATACTACATATAATCTTAAACTTTTATTCTACATAATCTTGTCACTTAAAGCATTATCAAACATATCCGCTTATACTAACTCCGTTTCAAAATGATTTTTACATTTTCCATTGTAGTCTGTTTCATAATGTTCTTTGCATTGTATTTCATACTATTGTTTGACATGAAAATTTACTATTTTACCTTTGTTACTGCAACATTTCTTATACTTCATTCATTTTTTTGTTATACCCACACGCTTTTTGTAAATTTCTCTTATTTTATCCATATTTTATTAT

Coding sequence (CDS)

ATGGATATACCGGAGCTACTTGCAATATTCGGGCCGGGTATCGCCGGCGCCGTATTCGGGGCGGGCTGGTGGTTTTGGGTTGACGCCGTGGTTTGCAGCTCCATCGTCGTCTCTTTCGTCCACTATCTCCCTGGAATATTTGCATCTTTGGCGGCTTTGATGTTCAATTGTGTGAGGAAAGAAGACATCGATTACTCCCCTTACGATGATGGGGAGTGGAGATTGAAGCTCTGGCTTTTCCTTGCTTATGTCGTATCTTTTGTGTCACTTGCGGCATCAGTTGGGCTGCTTATACAAGATGCCATGTTGCCTTCTGGACCATCAACATGGACTGGGGTTGCGGGTGTCTTGCAGTGTGTATTTGTGCTGATTAGTGGGTTGATCTATTGGACTTCACATTCCGAGTAG

Protein sequence

MDIPELLAIFGPGIAGAVFGAGWWFWVDAVVCSSIVVSFVHYLPGIFASLAALMFNCVRKEDIDYSPYDDGEWRLKLWLFLAYVVSFVSLAASVGLLIQDAMLPSGPSTWTGVAGVLQCVFVLISGLIYWTSHSE
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameType
Spo23610Spo23610gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameType
Spo23610.1Spo23610.1-proteinpolypeptide


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameType
Spo23610.1.utr5p.1Spo23610.1.utr5p.1five_prime_UTR


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameType
Spo23610.1.CDS.4Spo23610.1.CDS.4CDS
Spo23610.1.CDS.3Spo23610.1.CDS.3CDS
Spo23610.1.CDS.2Spo23610.1.CDS.2CDS
Spo23610.1.CDS.1Spo23610.1.CDS.1CDS


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameType
Spo23610.1.utr3p.1Spo23610.1.utr3p.1three_prime_UTR


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameType
Spo23610.1.exon.4Spo23610.1.exon.4exon
Spo23610.1.exon.3Spo23610.1.exon.3exon
Spo23610.1.exon.2Spo23610.1.exon.2exon
Spo23610.1.exon.1Spo23610.1.exon.1exon


Homology
[Close]
BLAST of Spo23610.1 vs. NCBI nr
Match: gi|902195578|gb|KNA12878.1| (hypothetical protein SOVF_121180 [Spinacia oleracea])

HSP 1 Score: 280.4 bits (716), Expect = 1.600e-72
Identity = 135/135 (100.00%), Postives = 135/135 (100.00%), Query Frame = 1 

		  

Query: 1   MDIPELLAIFGPGIAGAVFGAGWWFWVDAVVCSSIVVSFVHYLPGIFASLAALMFNCVRK 60
           MDIPELLAIFGPGIAGAVFGAGWWFWVDAVVCSSIVVSFVHYLPGIFASLAALMFNCVRK
Sbjct: 1   MDIPELLAIFGPGIAGAVFGAGWWFWVDAVVCSSIVVSFVHYLPGIFASLAALMFNCVRK 60

Query: 61  EDIDYSPYDDGEWRLKLWLFLAYVVSFVSLAASVGLLIQDAMLPSGPSTWTGVAGVLQCV 120
           EDIDYSPYDDGEWRLKLWLFLAYVVSFVSLAASVGLLIQDAMLPSGPSTWTGVAGVLQCV
Sbjct: 61  EDIDYSPYDDGEWRLKLWLFLAYVVSFVSLAASVGLLIQDAMLPSGPSTWTGVAGVLQCV 120

Query: 121 FVLISGLIYWTSHSE 136
           FVLISGLIYWTSHSE
Sbjct: 121 FVLISGLIYWTSHSE 135
[Close]
BLAST of Spo23610.1 vs. NCBI nr
Match: gi|731310686|ref|XP_010671732.1| (PREDICTED: transmembrane protein 50 homolog isoform X1 [Beta vulgaris subsp. vulgaris])

HSP 1 Score: 265.8 bits (678), Expect = 4.200e-68
Identity = 123/135 (91.11%), Postives = 131/135 (97.04%), Query Frame = 1 

		  

Query: 1   MDIPELLAIFGPGIAGAVFGAGWWFWVDAVVCSSIVVSFVHYLPGIFASLAALMFNCVRK 60
           MDIPELLAIFGPG AGAVFGAGWWFWVDAVVCS++ VSFVHYLPGIFASL+ALMFNCVRK
Sbjct: 1   MDIPELLAIFGPGFAGAVFGAGWWFWVDAVVCSAVAVSFVHYLPGIFASLSALMFNCVRK 60

Query: 61  EDIDYSPYDDGEWRLKLWLFLAYVVSFVSLAASVGLLIQDAMLPSGPSTWTGVAGVLQCV 120
           EDIDYSPYD+GEWRLKLWLFLAYV+SFVSLAASVGLLIQDA++P+GPS WTG AGVLQCV
Sbjct: 61  EDIDYSPYDEGEWRLKLWLFLAYVISFVSLAASVGLLIQDALVPTGPSAWTGTAGVLQCV 120

Query: 121 FVLISGLIYWTSHSE 136
           FVLISGLIYWTSHSE
Sbjct: 121 FVLISGLIYWTSHSE 135
[Close]
BLAST of Spo23610.1 vs. NCBI nr
Match: gi|510937263|gb|AGN52920.1| (hypothetical protein [Silene latifolia])

HSP 1 Score: 261.9 bits (668), Expect = 6.100e-67
Identity = 121/135 (89.63%), Postives = 132/135 (97.78%), Query Frame = 1 

		  

Query: 1   MDIPELLAIFGPGIAGAVFGAGWWFWVDAVVCSSIVVSFVHYLPGIFASLAALMFNCVRK 60
           M+I ELLAIFGPGI+GAVFGAGWWFWVDAVVCS++ +SF+HYLPGIFASLAALMFNCVRK
Sbjct: 1   MEISELLAIFGPGISGAVFGAGWWFWVDAVVCSAVTISFLHYLPGIFASLAALMFNCVRK 60

Query: 61  EDIDYSPYDDGEWRLKLWLFLAYVVSFVSLAASVGLLIQDAMLPSGPSTWTGVAGVLQCV 120
           EDIDYSPYD+GEWRLKLWLF+AYVV+FVSLAASVGLLIQDA++PSGPSTWTGVAGVLQCV
Sbjct: 61  EDIDYSPYDEGEWRLKLWLFIAYVVAFVSLAASVGLLIQDALVPSGPSTWTGVAGVLQCV 120

Query: 121 FVLISGLIYWTSHSE 136
           FVLISGLIYWTSH E
Sbjct: 121 FVLISGLIYWTSHLE 135
[Close]
BLAST of Spo23610.1 vs. NCBI nr
Match: gi|697161168|ref|XP_009589362.1| (PREDICTED: transmembrane protein 50 homolog [Nicotiana tomentosiformis])

HSP 1 Score: 259.6 bits (662), Expect = 3.000e-66
Identity = 122/135 (90.37%), Postives = 129/135 (95.56%), Query Frame = 1 

		  

Query: 1   MDIPELLAIFGPGIAGAVFGAGWWFWVDAVVCSSIVVSFVHYLPGIFASLAALMFNCVRK 60
           MD PEL AIFGPG++GAVFGAGWWFWVDAVVCSS+ VSF+HYLPGIFASLAALMFNCVRK
Sbjct: 1   MDFPELWAIFGPGVSGAVFGAGWWFWVDAVVCSSVKVSFLHYLPGIFASLAALMFNCVRK 60

Query: 61  EDIDYSPYDDGEWRLKLWLFLAYVVSFVSLAASVGLLIQDAMLPSGPSTWTGVAGVLQCV 120
           EDIDYSPYD+GEWRLKLWLF+AYVVSFVSLAASVGLLIQDA+  SGPS WTGVAGVLQCV
Sbjct: 61  EDIDYSPYDEGEWRLKLWLFIAYVVSFVSLAASVGLLIQDALGKSGPSAWTGVAGVLQCV 120

Query: 121 FVLISGLIYWTSHSE 136
           FVLISGLIYWTSHSE
Sbjct: 121 FVLISGLIYWTSHSE 135
[Close]
BLAST of Spo23610.1 vs. NCBI nr
Match: gi|1000977990|ref|XP_015571620.1| (PREDICTED: transmembrane protein 50A [Ricinus communis])

HSP 1 Score: 257.7 bits (657), Expect = 1.100e-65
Identity = 119/135 (88.15%), Postives = 129/135 (95.56%), Query Frame = 1 

		  

Query: 1   MDIPELLAIFGPGIAGAVFGAGWWFWVDAVVCSSIVVSFVHYLPGIFASLAALMFNCVRK 60
           MD+PEL AIFGPG+AGAVFGAGWWFWVDAVVCS++ VSFVHYLPGIFAS+AALMFNCVRK
Sbjct: 1   MDLPELWAIFGPGVAGAVFGAGWWFWVDAVVCSAVKVSFVHYLPGIFASIAALMFNCVRK 60

Query: 61  EDIDYSPYDDGEWRLKLWLFLAYVVSFVSLAASVGLLIQDAMLPSGPSTWTGVAGVLQCV 120
           EDIDYSPY++GEWRLKLWLF AYVVSFVSLAASVGLLIQD+++ SGPS WTG AGVLQCV
Sbjct: 61  EDIDYSPYEEGEWRLKLWLFFAYVVSFVSLAASVGLLIQDSLVKSGPSVWTGTAGVLQCV 120

Query: 121 FVLISGLIYWTSHSE 136
           FVLISGLIYWTSHSE
Sbjct: 121 FVLISGLIYWTSHSE 135
[Close]
BLAST of Spo23610.1 vs. UniProtKB/TrEMBL
Match: A0A0K9R041_SPIOL (Uncharacterized protein OS=Spinacia oleracea GN=SOVF_121180 PE=4 SV=1)

HSP 1 Score: 280.4 bits (716), Expect = 1.100e-72
Identity = 135/135 (100.00%), Postives = 135/135 (100.00%), Query Frame = 1 

		  

Query: 1   MDIPELLAIFGPGIAGAVFGAGWWFWVDAVVCSSIVVSFVHYLPGIFASLAALMFNCVRK 60
           MDIPELLAIFGPGIAGAVFGAGWWFWVDAVVCSSIVVSFVHYLPGIFASLAALMFNCVRK
Sbjct: 1   MDIPELLAIFGPGIAGAVFGAGWWFWVDAVVCSSIVVSFVHYLPGIFASLAALMFNCVRK 60

Query: 61  EDIDYSPYDDGEWRLKLWLFLAYVVSFVSLAASVGLLIQDAMLPSGPSTWTGVAGVLQCV 120
           EDIDYSPYDDGEWRLKLWLFLAYVVSFVSLAASVGLLIQDAMLPSGPSTWTGVAGVLQCV
Sbjct: 61  EDIDYSPYDDGEWRLKLWLFLAYVVSFVSLAASVGLLIQDAMLPSGPSTWTGVAGVLQCV 120

Query: 121 FVLISGLIYWTSHSE 136
           FVLISGLIYWTSHSE
Sbjct: 121 FVLISGLIYWTSHSE 135
[Close]
BLAST of Spo23610.1 vs. UniProtKB/TrEMBL
Match: A0A0J8D757_BETVU (Uncharacterized protein OS=Beta vulgaris subsp. vulgaris GN=BVRB_1g000430 PE=4 SV=1)

HSP 1 Score: 265.8 bits (678), Expect = 2.900e-68
Identity = 123/135 (91.11%), Postives = 131/135 (97.04%), Query Frame = 1 

		  

Query: 1   MDIPELLAIFGPGIAGAVFGAGWWFWVDAVVCSSIVVSFVHYLPGIFASLAALMFNCVRK 60
           MDIPELLAIFGPG AGAVFGAGWWFWVDAVVCS++ VSFVHYLPGIFASL+ALMFNCVRK
Sbjct: 1   MDIPELLAIFGPGFAGAVFGAGWWFWVDAVVCSAVAVSFVHYLPGIFASLSALMFNCVRK 60

Query: 61  EDIDYSPYDDGEWRLKLWLFLAYVVSFVSLAASVGLLIQDAMLPSGPSTWTGVAGVLQCV 120
           EDIDYSPYD+GEWRLKLWLFLAYV+SFVSLAASVGLLIQDA++P+GPS WTG AGVLQCV
Sbjct: 61  EDIDYSPYDEGEWRLKLWLFLAYVISFVSLAASVGLLIQDALVPTGPSAWTGTAGVLQCV 120

Query: 121 FVLISGLIYWTSHSE 136
           FVLISGLIYWTSHSE
Sbjct: 121 FVLISGLIYWTSHSE 135
[Close]
BLAST of Spo23610.1 vs. UniProtKB/TrEMBL
Match: R9UE90_SILLA (Uncharacterized protein OS=Silene latifolia PE=2 SV=1)

HSP 1 Score: 261.9 bits (668), Expect = 4.200e-67
Identity = 121/135 (89.63%), Postives = 132/135 (97.78%), Query Frame = 1 

		  

Query: 1   MDIPELLAIFGPGIAGAVFGAGWWFWVDAVVCSSIVVSFVHYLPGIFASLAALMFNCVRK 60
           M+I ELLAIFGPGI+GAVFGAGWWFWVDAVVCS++ +SF+HYLPGIFASLAALMFNCVRK
Sbjct: 1   MEISELLAIFGPGISGAVFGAGWWFWVDAVVCSAVTISFLHYLPGIFASLAALMFNCVRK 60

Query: 61  EDIDYSPYDDGEWRLKLWLFLAYVVSFVSLAASVGLLIQDAMLPSGPSTWTGVAGVLQCV 120
           EDIDYSPYD+GEWRLKLWLF+AYVV+FVSLAASVGLLIQDA++PSGPSTWTGVAGVLQCV
Sbjct: 61  EDIDYSPYDEGEWRLKLWLFIAYVVAFVSLAASVGLLIQDALVPSGPSTWTGVAGVLQCV 120

Query: 121 FVLISGLIYWTSHSE 136
           FVLISGLIYWTSH E
Sbjct: 121 FVLISGLIYWTSHLE 135
[Close]
BLAST of Spo23610.1 vs. UniProtKB/TrEMBL
Match: M1CNS7_SOLTU (Uncharacterized protein OS=Solanum tuberosum GN=PGSC0003DMG400027793 PE=4 SV=1)

HSP 1 Score: 257.3 bits (656), Expect = 1.000e-65
Identity = 121/135 (89.63%), Postives = 128/135 (94.81%), Query Frame = 1 

		  

Query: 1   MDIPELLAIFGPGIAGAVFGAGWWFWVDAVVCSSIVVSFVHYLPGIFASLAALMFNCVRK 60
           MD  EL AIFGPG+AGAVFGAGWWFWVDAVVCSS+ +SF+HYLPGIFASLAALMFNCVRK
Sbjct: 1   MDFSELWAIFGPGVAGAVFGAGWWFWVDAVVCSSVKISFLHYLPGIFASLAALMFNCVRK 60

Query: 61  EDIDYSPYDDGEWRLKLWLFLAYVVSFVSLAASVGLLIQDAMLPSGPSTWTGVAGVLQCV 120
           EDIDYSPYD+GEWRLKLWLF+AYVVSFVSLAASVGLLIQDA+  SGPS WTGVAGVLQCV
Sbjct: 61  EDIDYSPYDEGEWRLKLWLFIAYVVSFVSLAASVGLLIQDALGKSGPSAWTGVAGVLQCV 120

Query: 121 FVLISGLIYWTSHSE 136
           FVLISGLIYWTSHSE
Sbjct: 121 FVLISGLIYWTSHSE 135
[Close]
BLAST of Spo23610.1 vs. UniProtKB/TrEMBL
Match: A0A067GZQ4_CITSI (Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g032718mg PE=4 SV=1)

HSP 1 Score: 256.5 bits (654), Expect = 1.800e-65
Identity = 119/135 (88.15%), Postives = 129/135 (95.56%), Query Frame = 1 

		  

Query: 1   MDIPELLAIFGPGIAGAVFGAGWWFWVDAVVCSSIVVSFVHYLPGIFASLAALMFNCVRK 60
           MD+ EL AIFGPG+AGAVFGAGWWFW+DAVVCSS+ VSFVHYLPGIFASLAALMFNCVRK
Sbjct: 1   MDLAELWAIFGPGVAGAVFGAGWWFWIDAVVCSSVKVSFVHYLPGIFASLAALMFNCVRK 60

Query: 61  EDIDYSPYDDGEWRLKLWLFLAYVVSFVSLAASVGLLIQDAMLPSGPSTWTGVAGVLQCV 120
           EDIDYSPY++GEWRLKLWLFLAYVVSFVSLAASVGLLIQD+++ +GPS WTG AGVLQCV
Sbjct: 61  EDIDYSPYEEGEWRLKLWLFLAYVVSFVSLAASVGLLIQDSLVKTGPSAWTGTAGVLQCV 120

Query: 121 FVLISGLIYWTSHSE 136
           FVLISGLIYWTSHSE
Sbjct: 121 FVLISGLIYWTSHSE 135
[Close]
BLAST of Spo23610.1 vs. TAIR (Arabidopsis)
Match: AT1G36980.1 (unknown protein)

HSP 1 Score: 250.0 bits (637), Expect = 8.400e-67
Identity = 116/135 (85.93%), Postives = 126/135 (93.33%), Query Frame = 1 

		  

Query: 1   MDIPELLAIFGPGIAGAVFGAGWWFWVDAVVCSSIVVSFVHYLPGIFASLAALMFNCVRK 60
           MD+ EL AIFGPG +GAVFG GWWFWVDAVVCSSI V FVHYLPGIFASL ALMFNCVRK
Sbjct: 1   MDLAELWAIFGPGFSGAVFGTGWWFWVDAVVCSSIQVPFVHYLPGIFASLGALMFNCVRK 60

Query: 61  EDIDYSPYDDGEWRLKLWLFLAYVVSFVSLAASVGLLIQDAMLPSGPSTWTGVAGVLQCV 120
           EDIDYSPYD+GEWRLKLWLF+AYVV+FVSLAASVGLLIQD+++ +GPSTWTGVAGV QCV
Sbjct: 61  EDIDYSPYDEGEWRLKLWLFIAYVVAFVSLAASVGLLIQDSVVKTGPSTWTGVAGVFQCV 120

Query: 121 FVLISGLIYWTSHSE 136
           FVLISGL+YWTSHSE
Sbjct: 121 FVLISGLMYWTSHSE 135
The following BLAST results are available for this feature:
BLAST of Spo23610.1 vs. NCBI nr
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. NCBI nr)
Total hits: 5
Match NameE-valueIdentityDescription
gi|902195578|gb|KNA12878.1|1.6e-72100.hypothetical protein SOVF_1211... [more]
gi|731310686|ref|XP_010671732.1|4.2e-6891.1PREDICTED: transmembrane prote... [more]
gi|510937263|gb|AGN52920.1|6.1e-6789.6hypothetical protein [Silene l... [more]
gi|697161168|ref|XP_009589362.1|3.0e-6690.3PREDICTED: transmembrane prote... [more]
gi|1000977990|ref|XP_015571620.1|1.1e-6588.1PREDICTED: transmembrane prote... [more]
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BLAST of Spo23610.1 vs. UniProtKB/TrEMBL
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. UniprotKB/TrEMBL)
Total hits: 5
Match NameE-valueIdentityDescription
A0A0K9R041_SPIOL1.1e-72100.Uncharacterized protein OS=Spi... [more]
A0A0J8D757_BETVU2.9e-6891.1Uncharacterized protein OS=Bet... [more]
R9UE90_SILLA4.2e-6789.6Uncharacterized protein OS=Sil... [more]
M1CNS7_SOLTU1.0e-6589.6Uncharacterized protein OS=Sol... [more]
A0A067GZQ4_CITSI1.8e-6588.1Uncharacterized protein OS=Cit... [more]
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BLAST of Spo23610.1 vs. ExPASy Swiss-Prot
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. ExPASy SwissProt)
Total hits: 0
Match NameE-valueIdentityDescription
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BLAST of Spo23610.1 vs. TAIR (Arabidopsis)
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. TAIR)
Total hits: 1
Match NameE-valueIdentityDescription
AT1G36980.18.4e-6785.9unknown protein[more]
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InterPro
Analysis Name: InterPro Annotations of S. oleracea
Date Performed: 2018-06-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR007919Uncharacterised protein family UPF0220PANTHERPTHR13180SMALL MEMBRANE PROTEIN-RELATEDcoord: 8..135
score: 2.0
IPR007919Uncharacterised protein family UPF0220PFAMPF05255UPF0220coord: 13..133
score: 8.8
NoneNo IPR availablePANTHERPTHR13180:SF3SUBFAMILY NOT NAMEDcoord: 8..135
score: 2.0

GO Annotation
GO Assignments
This mRNA is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0006661 phosphatidylinositol biosynthetic process
cellular_component GO:0016021 integral component of membrane