Spo12911.1 (mRNA) | SpinachBase

Overview


Name	Spo12911.1
Type	mRNA
Organism	Spinacia oleracea (Spinach)
Description	ATP-dependent clp protease ATP binding subunit
Location	chr3 : 1073650 .. 1077986 (-)
Sequence length	817

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonpolypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

CTTTTTTACTCTTTCCCATCCTTCCTCCAAAACACTTCAACACCAGTGCCAGAAACGTCACAGAGGAAGCAATTTCTTCCCAAAACACGCCGCTGAAACAAAAATGGCTGCTCATTCTCTCACCTCACATTCTCTCTCTTCAATCGCTTCTTCATCGGAGCTTCGCAAATTCAATTGCTCTAATTCGTTTCTTCCATCTGCTAAATCAAGGAGTTTAGTCAGCTCGTTTGTCGGAAATCAGCTCGCAATTCGGCAACCTAACCCTAATTTTGTCGTCTTGAGGCGGCAATCGACGATTATGACCGTTACTTTCAGCTTACCAGCGAGGCTAGTTTCTTTAATTCAATTGTATTTTGTCAATTTTATGAATTGATTTTTGTTTTCTGAATTTGGAATTGTGAATTTTTTTTTTGTTATTGCAGTAAGCCGGAGGGAGTTTCTGCTGATAAAATGCCAAAGTAAGGTTCCTTAAAATAAAAATTTGTTTAATTGGTTTGATTTTGTGTCGACACGTGATTTTGTTTTTAATTAAATGTGTACATTATGCTGAAAATGTTCAAATTATGCTAAATGTGTGCTGAGTTATGAGTAGCTAGAACTTCAGTCATGGCGGATATGTTTTGGAATTGCGCTTGTTTTCTTCGGTGGTTGTGGACTAAAACTACTAGCATTGGTTGTGATATACCCTTATCAATAGTGATTAATAACAGTATGAGTATAATGTGCTTAGTTATGAGCTAGCAAGAACTTCAGTCATGGCGGATTGATTTTGGGATTGTGCTTGTTTTCTTCGGTTGTTGTGGACTAAAACTACTAGTATTGCTTATGCTATGCCCTTATCAATACGGAGTAGTTATTAATAGTATGAGCATAATGTGCTTAGTTATGAGCTAGCTAGAACTTCAGCCATGGCGGATTGATTTTGGGATTGCGCTTGTTTTCTTCTGTTGTTGTGGACTAAGACTACTAGTATTGCTTGTGACATGCCCTTACTAATAGCTATTAGTAATAGTATGAGCATCATCAAATTTTGCTTGACCTATTTTAAGTTAATAGGTTGAAGAACTCTTAGGTCTTCGGTTTCGCAAGAAATTAGAAATTTGTCACTCACTAGTAATATATGGATTTGTGTTTGTTGATTGATATGCCCCTTCTGCTTAATGTATATGGACGGCATCCTGGCTTAGAGTATATGGATGGCAGCCTGACTTAGTGTATATGGGTGGTATCCTGAATCAGTTTCTTTTCCTTCGTGACATTTGGAAAGGGGTGTTTTCTTGCCTGTTATTATGTCATTAAAAATTTTCCTTTCTCGACAGTATCTGAATGATTGTTTTGTTTCCAAGCTTGAAACAGATGGTCTGCAAGGGCTATAAAATCGTTCGCCATGGGTGAGCTCGAAGCAAGAAAACTAAAGTATCCGAACACAGGGACCGAGGCGCTTCTGATGGGGATCTTGGTTGAGGGTTTGTAACTCAGTCGTGGTTGAAAAATTCTCTTCGGTGTTTTGCAGTTCAGTTTTTAAGACTGCTTATCCTTCACATAATTTTTAATACGTATTAAAAATTTGAACATAATATTTTATTGAACTGCTGGATTGTATATAGAATGGTCAATCCTTTATAAGAATGCTTATGATTTGGACAATACTAAGGTGATTCGGTTGTCCTTAGCTAACCAATCAACTCTATTTGCATAACAGAAATGACTACATCCATGTTCAATAATACTTCTGATCATATTGGTAGCTTNGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGAATTAGGTATTTAGGTGGAACCACTAGCCCAGGAGGCCATTTAGTGTACACGGACACCAGCATAGATACATTAAGCTAAAGCAACCATTTTGGTCTTTGTTGAGAGGAATTAGCAACTTCAGTGAATAATTTGGTAATTCAAAGTGACGAAGTGTACGTGTGGCTGTTTATTGAGTCAACTTGGAGAAGAACTCTTTAACTTAATCATTCATCTTGGACCTTATTGAGTTGAGGCTGCGTTCTTAAAGAAGAAGGATGAGAAAGTTTTGCATGATTCTTGTCATTGTGGAGATACTAGGAACGTTTTCATTTTGTTATGAGATGCGTGGTTGTTCTTGTTGATAAGCTAAAGCTATATAGAAGTACTTTTTAGTCAGGAATCTGATTTATACAAAAAAGAGGTAGAACAGAAGTATACGATGGATATGGTCTGGTGGTTGGCCGATAGTTGTATCTTGTATGGGAAAGTAACCAGTAGAAGAGAATAAAGAACAACAAGTGCCCTGCTGGAGATTTTTAAAACAGGGAGGGTGATGTGAGAGTTGTATGAAAGTTTGTATCCCATGTTGAAAATTATTAAGGAAGTGTAATGCTTATATTACATCACACAGCCACACAGGGGTTGGAATAATAAGGTCCATTCCCGAGCATATCCCATGTTGATAAATATTAAGGAAGTGAGCTAGATGGATTGGGCTATGTGTGACATAAGTCGTGATTGGATATTCTCGTATGCCCCCATCCGCAGCATAGATATAGTTTCTCCTGGAATATTGATGAAACTTTGCCTTGAACATAGTTTTAATCCTGCAAAATCTCTAGTATTTCCACTATGTTCACTTAAGACTTTAAGGCTCTTGCTCTCTGTTACTTGGAAACCCCTGTCCCTCTTTTTCTTTTCTCCTCAAAGCTGATCTGTTGGATAACTACTACTTGTATTATTTCACCAGCTGAAGTAGTATCTTGCTTTCTATGTATAGGAACAAGCCAGGCTGCAAAAGTTTTAAGGGCTAGTGGCGTCACCCTTTTTAAGGTGCGAGATGAAACCATCAACTTGCTTGGAAAATCTGACATGTACTTCTTCAGTCCCGAGCATCCTCCATTGACCGAACCAGCTCAGAAGGCTCTCGATTGGGCTATTGATCAGAAACTGAAGTCAGGTAGTTTCTTCTCTTTCATTTATCAGGAGGATTCAATATTACTCCGTATATGCCTATTGAATGTGTTTTAGGCCGTAATTCACTAGATCTTTACTGCTTCAAAGCTCAGGTTTTAGACCATAATTCACTGAATCAGAAATGTGTACATCTAACTTTAATCCCATGAACAAAAACTAGTCATAGCTTCCCAAATCTATTTATTTGCTGCTTGATGTTGTACTGTTTATGCAAAAGCCTGCATTCCTTTTAGCGATTCTAGATTTGTAGTTATTATTTGTGTTAATGAAAATGTGTGCCGACAATTTCTTCTGTAATTATATCTAACAGGGCCAATCGGCCAAATTAGCATTAGCAATCTGAGCAAAAGTTTCTAAACTCTTCATTGGCAATGCAGGTGAAGATGGAGAAGTAACTGTAACTTATTTGCTTCTCGGAATCTGGGAACAAAAGGAGTCTGCTGCTCACCAGATAATGACAGCTCTTGGTTTCAGTGACGAGAAAGCAAAAGAGCTTTCGAAATTTGTGAGTTTCTTGCAGAGTTTTACTCAAAGATCATTCTTTTTTTCATTTACCTCTCATTGCAATAGCAATAGTGCAAACCTTCATAAGGTTTATTTCTATGCCACATCATCATTTTATAAACCTCATTCCCAAAAAAACCTTATGCTTACAAGTTACAATAGACAAACCTATTAAAAAGGTTTATGTAGGGACCCACGAACATATCACCCAACTCACATACGGAGTAAGGGCAATAGCAGTAAGAGGTTTGTCAAGAGGTTTGTATTGCATTTGTTATGTAGACAAACCTCACTATTGTTAGGAAAAGTTACAAAACCCAAGGTTACTAAAGAGCAAGTGGTTTGTATTTGCCATGTAAGCAAAACATATTAATTTTTACTTTCCTTTTGGTGGTTTGTTTTAAATGAGATGAATGATAATAGGTCGCACATATAAACCTTTGTATAGGGTATAGGTTTATCTATTGTTGGTGGAAGGTTCATTATAATCAAGATTTGTAAAATGATGATGTGGCATGGGAACAAACCTTATTAAAGTTTCTTCTATTGCTATTGCTCTTATTTTACTTTCTTTACTTTATGAGATGCAATTGTTTTTAGTAACTTCTCTTAAAATTATTTGGACTAGTAATAGTAACGTTTGTATACAAACCTCAAAATCATGAAACAAACCTCGTGAAAAACCTCTCATTTCCATTGCCCTCCGTTCCCACATTTATGTTCTTTTCTTATAATTTTTTGTTCTACACAGATGGATAAAGACATTGTTCTAGCACATCACAAGTAG

mRNA sequence

CTTTTTTACTCTTTCCCATCCTTCCTCCAAAACACTTCAACACCAGTGCCAGAAACGTCACAGAGGAAGCAATTTCTTCCCAAAACACGCCGCTGAAACAAAAATGGCTGCTCATTCTCTCACCTCACATTCTCTCTCTTCAATCGCTTCTTCATCGGAGCTTCGCAAATTCAATTGCTCTAATTCGTTTCTTCCATCTGCTAAATCAAGGAGTTTAGTCAGCTCGTTTGTCGGAAATCAGCTCGCAATTCGGCAACCTAACCCTAATTTTGTCGTCTTGAGGCGGCAATCGACGATTATGACCGTTACTTTCAGCTTACCAGCGAGTAAGCCGGAGGGAGTTTCTGCTGATAAAATGCCAAAATGGTCTGCAAGGGCTATAAAATCGTTCGCCATGGGTGAGCTCGAAGCAAGAAAACTAAAGTATCCGAACACAGGGACCGAGGCGCTTCTGATGGGGATCTTGGTTGAGGGAACAAGCCAGGCTGCAAAAGTTTTAAGGGCTAGTGGCGTCACCCTTTTTAAGGTGCGAGATGAAACCATCAACTTGCTTGGAAAATCTGACATGTACTTCTTCAGTCCCGAGCATCCTCCATTGACCGAACCAGCTCAGAAGGCTCTCGATTGGGCTATTGATCAGAAACTGAAGTCAGGTGAAGATGGAGAAGTAACTGTAACTTATTTGCTTCTCGGAATCTGGGAACAAAAGGAGTCTGCTGCTCACCAGATAATGACAGCTCTTGGTTTCAGTGACGAGAAAGCAAAAGAGCTTTCGAAATTTATGGATAAAGACATTGTTCTAGCACATCACAAGTAG

Coding sequence (CDS)

ATGGCTGCTCATTCTCTCACCTCACATTCTCTCTCTTCAATCGCTTCTTCATCGGAGCTTCGCAAATTCAATTGCTCTAATTCGTTTCTTCCATCTGCTAAATCAAGGAGTTTAGTCAGCTCGTTTGTCGGAAATCAGCTCGCAATTCGGCAACCTAACCCTAATTTTGTCGTCTTGAGGCGGCAATCGACGATTATGACCGTTACTTTCAGCTTACCAGCGAGTAAGCCGGAGGGAGTTTCTGCTGATAAAATGCCAAAATGGTCTGCAAGGGCTATAAAATCGTTCGCCATGGGTGAGCTCGAAGCAAGAAAACTAAAGTATCCGAACACAGGGACCGAGGCGCTTCTGATGGGGATCTTGGTTGAGGGAACAAGCCAGGCTGCAAAAGTTTTAAGGGCTAGTGGCGTCACCCTTTTTAAGGTGCGAGATGAAACCATCAACTTGCTTGGAAAATCTGACATGTACTTCTTCAGTCCCGAGCATCCTCCATTGACCGAACCAGCTCAGAAGGCTCTCGATTGGGCTATTGATCAGAAACTGAAGTCAGGTGAAGATGGAGAAGTAACTGTAACTTATTTGCTTCTCGGAATCTGGGAACAAAAGGAGTCTGCTGCTCACCAGATAATGACAGCTCTTGGTTTCAGTGACGAGAAAGCAAAAGAGCTTTCGAAATTTATGGATAAAGACATTGTTCTAGCACATCACAAGTAG

Protein sequence

MAAHSLTSHSLSSIASSSELRKFNCSNSFLPSAKSRSLVSSFVGNQLAIRQPNPNFVVLRRQSTIMTVTFSLPASKPEGVSADKMPKWSARAIKSFAMGELEARKLKYPNTGTEALLMGILVEGTSQAAKVLRASGVTLFKVRDETINLLGKSDMYFFSPEHPPLTEPAQKALDWAIDQKLKSGEDGEVTVTYLLLGIWEQKESAAHQIMTALGFSDEKAKELSKFMDKDIVLAHHK

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
Spo12911	Spo12911	gene

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
Spo12911.1	Spo12911.1-protein	polypeptide

The following five_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Spo12911.1.utr5p.1	Spo12911.1.utr5p.1	five_prime_UTR

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Spo12911.1.CDS.6	Spo12911.1.CDS.6	CDS
Spo12911.1.CDS.5	Spo12911.1.CDS.5	CDS
Spo12911.1.CDS.4	Spo12911.1.CDS.4	CDS
Spo12911.1.CDS.3	Spo12911.1.CDS.3	CDS
Spo12911.1.CDS.2	Spo12911.1.CDS.2	CDS
Spo12911.1.CDS.1	Spo12911.1.CDS.1	CDS

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Spo12911.1.exon.6	Spo12911.1.exon.6	exon
Spo12911.1.exon.5	Spo12911.1.exon.5	exon
Spo12911.1.exon.4	Spo12911.1.exon.4	exon
Spo12911.1.exon.3	Spo12911.1.exon.3	exon
Spo12911.1.exon.2	Spo12911.1.exon.2	exon
Spo12911.1.exon.1	Spo12911.1.exon.1	exon

Homology

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BLAST of Spo12911.1 vs. NCBI nr
Match: gi|902217451|gb|KNA17713.1| (hypothetical protein SOVF_077300 [Spinacia oleracea])

HSP 1 Score: 449.1 bits (1154), Expect = 4.700e-123
Identity = 234/237 (98.73%), Postives = 236/237 (99.58%), Query Frame = 1


		  
Query: 1   MAAHSLTSHSLSSIASSSELRKFNCSNSFLPSAKSRSLVSSFVGNQLAIRQPNPNFVVLR 60
           MAAHSLTSHSLSSIASSSELRKF+ SNSFLPSAKSRSLVSSFVGNQLAIRQPNPNFVVLR
Sbjct: 1   MAAHSLTSHSLSSIASSSELRKFDSSNSFLPSAKSRSLVSSFVGNQLAIRQPNPNFVVLR 60

Query: 61  RQSTIMTVTFSLPASKPEGVSADKMPKWSARAIKSFAMGELEARKLKYPNTGTEALLMGI 120
           RQSTIMTVTFSLPASKPEGVSADKMPKWSARAIKSFAMGELEARKLKYPNTGTEALLMGI
Sbjct: 61  RQSTIMTVTFSLPASKPEGVSADKMPKWSARAIKSFAMGELEARKLKYPNTGTEALLMGI 120

Query: 121 LVEGTSQAAKVLRASGVTLFKVRDETINLLGKSDMYFFSPEHPPLTEPAQKALDWAIDQK 180
           LVEGTSQAAKVLRASGVTLFKVRDETINLLGKSDMYFFSPEHPPLTEPAQKALDWAIDQK
Sbjct: 121 LVEGTSQAAKVLRASGVTLFKVRDETINLLGKSDMYFFSPEHPPLTEPAQKALDWAIDQK 180

Query: 181 LKSGEDGEVTVTYLLLGIWEQKESAAHQIMTALGFSDEKAKELSKFMDKDIVLAHHK 238
           LKSGEDGEVTVTYLLLGIWEQKESAAHQIMTALGFSDEKAKELS+FMDKDIVLAHHK
Sbjct: 181 LKSGEDGEVTVTYLLLGIWEQKESAAHQIMTALGFSDEKAKELSEFMDKDIVLAHHK 237

[Close]

BLAST of Spo12911.1 vs. NCBI nr
Match: gi|731322571|ref|XP_010671969.1| (PREDICTED: clp protease-related protein At4g12060, chloroplastic [Beta vulgaris subsp. vulgaris])

HSP 1 Score: 385.2 bits (988), Expect = 8.300e-104
Identity = 198/235 (84.26%), Postives = 217/235 (92.34%), Query Frame = 1


		  
Query: 1   MAAHSLTSHSLSSIASSSELRKFNCSNSFLPSAKSRSLVSSFVGNQLAIRQPNPNFVVLR 60
           MAAH+LTS SLSSI+SSSELRKFN   +FL S KS +L+SSF+GNQL IRQPNPNFVVL+
Sbjct: 1   MAAHTLTSSSLSSISSSSELRKFNSYATFLQSFKSSNLLSSFIGNQLTIRQPNPNFVVLK 60

Query: 61  RQSTIMTVTFSLPASKPEGVSADKMPKWSARAIKSFAMGELEARKLKYPNTGTEALLMGI 120
           RQST MTV+FSLP SK EGVSA+K+PKWSARAIKSFAMGELEARKLKYPNTGTEALLMGI
Sbjct: 61  RQSTNMTVSFSLPTSKREGVSAEKLPKWSARAIKSFAMGELEARKLKYPNTGTEALLMGI 120

Query: 121 LVEGTSQAAKVLRASGVTLFKVRDETINLLGKSDMYFFSPEHPPLTEPAQKALDWAIDQK 180
           LVEGTSQAAK+LRA+G+TLFKVRDE ++LLGKSDMY+FSPEHPPLTEPAQKALDWAIDQK
Sbjct: 121 LVEGTSQAAKILRANGITLFKVRDEIVDLLGKSDMYYFSPEHPPLTEPAQKALDWAIDQK 180

Query: 181 LKSGEDGEVTVTYLLLGIWEQKESAAHQIMTALGFSDEKAKELSKFMDKDIVLAH 236
           LKSGEDGEVTV+YLLLGIWEQKESAAHQIM ALGF+D K KEL K MDKDIV +H
Sbjct: 181 LKSGEDGEVTVSYLLLGIWEQKESAAHQIMVALGFNDVKVKELWKSMDKDIVCSH 235

[Close]

BLAST of Spo12911.1 vs. NCBI nr
Match: gi|596004279|ref|XP_007218298.1| (hypothetical protein PRUPE_ppa010759mg [Prunus persica])

HSP 1 Score: 297.0 bits (759), Expect = 3.000e-77
Identity = 156/234 (66.67%), Postives = 190/234 (81.20%), Query Frame = 1


		  
Query: 1   MAAHSLTSHSLSSIASSSEL-RKFNCSNSFLPS-AKSRSLVSSFVGNQLAIRQPNPNFVV 60
           MA+ S+T  +LS   S+S+L R  + S+  LP      +L ++F+G +L+IR PN N + 
Sbjct: 1   MASTSITLSALSISPSTSQLHRNPSASSPSLPCHLPPYNLSTTFMGKKLSIRVPNLNHLA 60

Query: 61  LRRQSTIMTVTFSLPASKPEGVSADKMPKWSARAIKSFAMGELEARKLKYPNTGTEALLM 120
            + ++ + TV FSLP +KP+  S  K PKWSARAIKSFAMGELEARKLKYPNTGTEALLM
Sbjct: 61  SKHRTAVATVLFSLPTAKPDRNSTGKSPKWSARAIKSFAMGELEARKLKYPNTGTEALLM 120

Query: 121 GILVEGTSQAAKVLRASGVTLFKVRDETINLLGKSDMYFFSPEHPPLTEPAQKALDWAID 180
           GILVEGTS AAK LRA+G+TLFKVRDET+NLLGKSD+YFFSPEHPPLTEPAQ+ALDWA+D
Sbjct: 121 GILVEGTSLAAKFLRANGITLFKVRDETVNLLGKSDLYFFSPEHPPLTEPAQRALDWAVD 180

Query: 181 QKLKSGEDGEVTVTYLLLGIWEQKESAAHQIMTALGFSDEKAKELSKFMDKDIV 233
           QKLKSGE+GE+TVT+LLLGIW +KESA H+I+ +LGF +EKAKELSK MD D V
Sbjct: 181 QKLKSGENGEITVTHLLLGIWSEKESAGHKILASLGFDEEKAKELSKSMDSDYV 234

[Close]

BLAST of Spo12911.1 vs. NCBI nr
Match: gi|565362648|ref|XP_006348058.1| (PREDICTED: ATP-dependent Clp protease ATP-binding subunit CLPT1, chloroplastic-like [Solanum tuberosum])

HSP 1 Score: 292.4 bits (747), Expect = 7.300e-76
Identity = 149/236 (63.14%), Postives = 188/236 (79.66%), Query Frame = 1


		  
Query: 1   MAAHSLTSHSLSSIASSSELRKFNCSNSFLPSAKSRSLVSSFVGNQLAIRQPN-PNFVVL 60
           MA HS +  S+ S+ S+S  ++   +N+FL     ++L ++F G +L IR  N  NF + 
Sbjct: 1   MATHSFSLLSIQSLTSNSSNKQSENTNTFLTHKYCKALATTFTGGKLLIRPQNLNNFTLK 60

Query: 61  RRQSTIMTVTFSLPASKPEGVSADKMPKWSARAIKSFAMGELEARKLKYPNTGTEALLMG 120
           RR+ST+ TV FSLP ++PE  S++K PKWS+RAI++F M ELEARKLKYPNTGTEALLMG
Sbjct: 61  RRRSTVATVAFSLPITRPE--SSEKQPKWSSRAIQAFVMAELEARKLKYPNTGTEALLMG 120

Query: 121 ILVEGTSQAAKVLRASGVTLFKVRDETINLLGKSDMYFFSPEHPPLTEPAQKALDWAIDQ 180
           ILVEGTS AAK LRA+GVT FKV +ET+ LLG+SDMY+FSPEHPPLT+PAQKALDWA+++
Sbjct: 121 ILVEGTSLAAKFLRANGVTFFKVSEETLKLLGRSDMYYFSPEHPPLTKPAQKALDWAVNE 180

Query: 181 KLKSGEDGEVTVTYLLLGIWEQKESAAHQIMTALGFSDEKAKELSKFMDKDIVLAH 236
           KLKSGEDGE+TVT++ LGIW  KESA H+IM+  GF DEKAKEL+KFMDKDI L +
Sbjct: 181 KLKSGEDGEITVTHIALGIWSVKESAGHKIMSTFGFDDEKAKELAKFMDKDIELTY 234

[Close]

BLAST of Spo12911.1 vs. NCBI nr
Match: gi|698524270|ref|XP_009758941.1| (PREDICTED: clp protease-related protein At4g12060, chloroplastic [Nicotiana sylvestris])

HSP 1 Score: 291.6 bits (745), Expect = 1.300e-75
Identity = 152/236 (64.41%), Postives = 184/236 (77.97%), Query Frame = 1


		  
Query: 1   MAAHSLTSHSLSSIASSSELRKFNCSNSFLPSAKSRSLVSSFVGNQLAIRQPNPN-FVVL 60
           MA HS +  S+ S  S+S  R+ +  N+ L     + L SSF G  ++IR  N N F + 
Sbjct: 1   MATHSFSLLSIPSSTSTSYNRQND--NNTLTQKYCKILASSFTGGMVSIRPQNLNVFALK 60

Query: 61  RRQSTIMTVTFSLPASKPEGVSADKMPKWSARAIKSFAMGELEARKLKYPNTGTEALLMG 120
           RR+ST+ TV+FSLP +KPE   +D  P+WSARAIK+FAM ELEARKLKYPNTGTEALLMG
Sbjct: 61  RRRSTVATVSFSLPTAKPERAPSDIQPRWSARAIKAFAMAELEARKLKYPNTGTEALLMG 120

Query: 121 ILVEGTSQAAKVLRASGVTLFKVRDETINLLGKSDMYFFSPEHPPLTEPAQKALDWAIDQ 180
           ILVEGTS AAK LRA+GVTL K R+ET+ LLGKSDMYFFSPEHPPLTEPAQ+ALDWA+D+
Sbjct: 121 ILVEGTSLAAKFLRANGVTLLKAREETVKLLGKSDMYFFSPEHPPLTEPAQRALDWAVDE 180

Query: 181 KLKSGEDGEVTVTYLLLGIWEQKESAAHQIMTALGFSDEKAKELSKFMDKDIVLAH 236
           KLKSGE GE+T+ YL LGIW +KESA H+IM  LGF DEKAKEL++ MDKDI +++
Sbjct: 181 KLKSGESGEITIAYLALGIWSEKESAGHKIMATLGFDDEKAKELARSMDKDIEMSY 234

[Close]

BLAST of Spo12911.1 vs. UniProtKB/TrEMBL
Match: A0A0K9RE38_SPIOL (Uncharacterized protein OS=Spinacia oleracea GN=SOVF_077300 PE=4 SV=1)

HSP 1 Score: 449.1 bits (1154), Expect = 3.300e-123
Identity = 234/237 (98.73%), Postives = 236/237 (99.58%), Query Frame = 1


		  
Query: 1   MAAHSLTSHSLSSIASSSELRKFNCSNSFLPSAKSRSLVSSFVGNQLAIRQPNPNFVVLR 60
           MAAHSLTSHSLSSIASSSELRKF+ SNSFLPSAKSRSLVSSFVGNQLAIRQPNPNFVVLR
Sbjct: 1   MAAHSLTSHSLSSIASSSELRKFDSSNSFLPSAKSRSLVSSFVGNQLAIRQPNPNFVVLR 60

Query: 61  RQSTIMTVTFSLPASKPEGVSADKMPKWSARAIKSFAMGELEARKLKYPNTGTEALLMGI 120
           RQSTIMTVTFSLPASKPEGVSADKMPKWSARAIKSFAMGELEARKLKYPNTGTEALLMGI
Sbjct: 61  RQSTIMTVTFSLPASKPEGVSADKMPKWSARAIKSFAMGELEARKLKYPNTGTEALLMGI 120

Query: 121 LVEGTSQAAKVLRASGVTLFKVRDETINLLGKSDMYFFSPEHPPLTEPAQKALDWAIDQK 180
           LVEGTSQAAKVLRASGVTLFKVRDETINLLGKSDMYFFSPEHPPLTEPAQKALDWAIDQK
Sbjct: 121 LVEGTSQAAKVLRASGVTLFKVRDETINLLGKSDMYFFSPEHPPLTEPAQKALDWAIDQK 180

Query: 181 LKSGEDGEVTVTYLLLGIWEQKESAAHQIMTALGFSDEKAKELSKFMDKDIVLAHHK 238
           LKSGEDGEVTVTYLLLGIWEQKESAAHQIMTALGFSDEKAKELS+FMDKDIVLAHHK
Sbjct: 181 LKSGEDGEVTVTYLLLGIWEQKESAAHQIMTALGFSDEKAKELSEFMDKDIVLAHHK 237

[Close]

BLAST of Spo12911.1 vs. UniProtKB/TrEMBL
Match: A0A0J8CQK4_BETVU (Uncharacterized protein OS=Beta vulgaris subsp. vulgaris GN=BVRB_3g055550 PE=4 SV=1)

HSP 1 Score: 385.2 bits (988), Expect = 5.800e-104
Identity = 198/235 (84.26%), Postives = 217/235 (92.34%), Query Frame = 1


		  
Query: 1   MAAHSLTSHSLSSIASSSELRKFNCSNSFLPSAKSRSLVSSFVGNQLAIRQPNPNFVVLR 60
           MAAH+LTS SLSSI+SSSELRKFN   +FL S KS +L+SSF+GNQL IRQPNPNFVVL+
Sbjct: 1   MAAHTLTSSSLSSISSSSELRKFNSYATFLQSFKSSNLLSSFIGNQLTIRQPNPNFVVLK 60

Query: 61  RQSTIMTVTFSLPASKPEGVSADKMPKWSARAIKSFAMGELEARKLKYPNTGTEALLMGI 120
           RQST MTV+FSLP SK EGVSA+K+PKWSARAIKSFAMGELEARKLKYPNTGTEALLMGI
Sbjct: 61  RQSTNMTVSFSLPTSKREGVSAEKLPKWSARAIKSFAMGELEARKLKYPNTGTEALLMGI 120

Query: 121 LVEGTSQAAKVLRASGVTLFKVRDETINLLGKSDMYFFSPEHPPLTEPAQKALDWAIDQK 180
           LVEGTSQAAK+LRA+G+TLFKVRDE ++LLGKSDMY+FSPEHPPLTEPAQKALDWAIDQK
Sbjct: 121 LVEGTSQAAKILRANGITLFKVRDEIVDLLGKSDMYYFSPEHPPLTEPAQKALDWAIDQK 180

Query: 181 LKSGEDGEVTVTYLLLGIWEQKESAAHQIMTALGFSDEKAKELSKFMDKDIVLAH 236
           LKSGEDGEVTV+YLLLGIWEQKESAAHQIM ALGF+D K KEL K MDKDIV +H
Sbjct: 181 LKSGEDGEVTVSYLLLGIWEQKESAAHQIMVALGFNDVKVKELWKSMDKDIVCSH 235

[Close]

BLAST of Spo12911.1 vs. UniProtKB/TrEMBL
Match: M5X0A6_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa010759mg PE=4 SV=1)

HSP 1 Score: 297.0 bits (759), Expect = 2.100e-77
Identity = 156/234 (66.67%), Postives = 190/234 (81.20%), Query Frame = 1


		  
Query: 1   MAAHSLTSHSLSSIASSSEL-RKFNCSNSFLPS-AKSRSLVSSFVGNQLAIRQPNPNFVV 60
           MA+ S+T  +LS   S+S+L R  + S+  LP      +L ++F+G +L+IR PN N + 
Sbjct: 1   MASTSITLSALSISPSTSQLHRNPSASSPSLPCHLPPYNLSTTFMGKKLSIRVPNLNHLA 60

Query: 61  LRRQSTIMTVTFSLPASKPEGVSADKMPKWSARAIKSFAMGELEARKLKYPNTGTEALLM 120
            + ++ + TV FSLP +KP+  S  K PKWSARAIKSFAMGELEARKLKYPNTGTEALLM
Sbjct: 61  SKHRTAVATVLFSLPTAKPDRNSTGKSPKWSARAIKSFAMGELEARKLKYPNTGTEALLM 120

Query: 121 GILVEGTSQAAKVLRASGVTLFKVRDETINLLGKSDMYFFSPEHPPLTEPAQKALDWAID 180
           GILVEGTS AAK LRA+G+TLFKVRDET+NLLGKSD+YFFSPEHPPLTEPAQ+ALDWA+D
Sbjct: 121 GILVEGTSLAAKFLRANGITLFKVRDETVNLLGKSDLYFFSPEHPPLTEPAQRALDWAVD 180

Query: 181 QKLKSGEDGEVTVTYLLLGIWEQKESAAHQIMTALGFSDEKAKELSKFMDKDIV 233
           QKLKSGE+GE+TVT+LLLGIW +KESA H+I+ +LGF +EKAKELSK MD D V
Sbjct: 181 QKLKSGENGEITVTHLLLGIWSEKESAGHKILASLGFDEEKAKELSKSMDSDYV 234

[Close]

BLAST of Spo12911.1 vs. UniProtKB/TrEMBL
Match: A0A0V0HL17_SOLCH (Putative clp protease-related protein, chloroplastic-like OS=Solanum chacoense PE=4 SV=1)

HSP 1 Score: 290.0 bits (741), Expect = 2.500e-75
Identity = 149/236 (63.14%), Postives = 187/236 (79.24%), Query Frame = 1


		  
Query: 1   MAAHSLTSHSLSSIASSSELRKFNCSNSFLPSAKSRSLVSSFVGNQLAIRQPN-PNFVVL 60
           MA HS +  S+ S+ S+S  ++   + +FL     ++L ++F G +L IR  N  NF + 
Sbjct: 1   MATHSFSLLSIQSLTSNSSNKQSENTTTFLTHKYCKALATTFTGGKLLIRPQNLNNFTLK 60

Query: 61  RRQSTIMTVTFSLPASKPEGVSADKMPKWSARAIKSFAMGELEARKLKYPNTGTEALLMG 120
           RR+ST+ TV FSLP ++PE  S++K PKWS+RAI++F M ELEARKLKYPNTGTEALLMG
Sbjct: 61  RRRSTVATVAFSLPITRPE--SSEKQPKWSSRAIQAFVMAELEARKLKYPNTGTEALLMG 120

Query: 121 ILVEGTSQAAKVLRASGVTLFKVRDETINLLGKSDMYFFSPEHPPLTEPAQKALDWAIDQ 180
           ILVEGTS AAK LRA+GVT FKV +ET+ LLG+SDMY+FSPEHPPLT+PAQKALDWA+++
Sbjct: 121 ILVEGTSLAAKFLRANGVTFFKVSEETLKLLGRSDMYYFSPEHPPLTKPAQKALDWAVNE 180

Query: 181 KLKSGEDGEVTVTYLLLGIWEQKESAAHQIMTALGFSDEKAKELSKFMDKDIVLAH 236
           KLKSGEDGE+TVT + LGIW  KESA H+IM+ LGF DEKAKEL+KFMDKDI L +
Sbjct: 181 KLKSGEDGEITVTNIALGIWSVKESAGHKIMSTLGFDDEKAKELAKFMDKDIELTY 234

[Close]

BLAST of Spo12911.1 vs. UniProtKB/TrEMBL
Match: A0A059DK71_EUCGR (Uncharacterized protein OS=Eucalyptus grandis GN=EUGRSUZ_A02874 PE=4 SV=1)

HSP 1 Score: 278.5 bits (711), Expect = 7.700e-72
Identity = 147/236 (62.29%), Postives = 181/236 (76.69%), Query Frame = 1


		  
Query: 1   MAAHSLTSHSLSSIASSSELRKFNCSNSFLPSAKSRS-LVSSFVGNQLAIRQPNPNFVVL 60
           MAA SL++  +S     S  +    S   L   +  S L SSF G++L++  P    +V 
Sbjct: 1   MAARSLSAFPISPSNPQSIPKGARDSPVSLAWNRGPSCLASSFNGSKLSVAPPRSRRLVR 60

Query: 61  RRQSTIMTVTFSLPASKPEGVSADKMPKWSARAIKSFAMGELEARKLKYPNTGTEALLMG 120
           R  S + TV  SLP  KP+  S DK+PKWSARAIKSFAM ELEARKLKYPNTGTEALLMG
Sbjct: 61  RFNSAVATVLLSLPTGKPDRASTDKLPKWSARAIKSFAMAELEARKLKYPNTGTEALLMG 120

Query: 121 ILVEGTSQAAKVLRASGVTLFKVRDETINLLGKSDMYFFSPEHPPLTEPAQKALDWAIDQ 180
           ILVEGTS AAK LRA+G+TLFKVR+ET+NLLGKSD+YFFSPEHPPLTE AQ+ALDWA+D 
Sbjct: 121 ILVEGTSLAAKFLRANGITLFKVREETVNLLGKSDLYFFSPEHPPLTEQAQRALDWAVDA 180

Query: 181 KLKSGEDGEVTVTYLLLGIWEQKESAAHQIMTALGFSDEKAKELSKFMDKDIVLAH 236
           KLKSGE GE+T T+LLLGIW +KESA H I+++LGF++EKA E++K MDKD++L++
Sbjct: 181 KLKSGESGEITTTHLLLGIWFEKESAGHMILSSLGFTEEKADEVAKSMDKDVILSY 236

[Close]

BLAST of Spo12911.1 vs. ExPASy Swiss-Prot
Match: CLPT1_ARATH (ATP-dependent Clp protease ATP-binding subunit CLPT1, chloroplastic OS=Arabidopsis thaliana GN=CLPT1 PE=1 SV=1)

HSP 1 Score: 254.2 bits (648), Expect = 1.400e-66
Identity = 139/235 (59.15%), Postives = 175/235 (74.47%), Query Frame = 1


		  
Query: 6   LTSHSLSSIASS-SELRKFNCSNSFLPSAKSR-SLVSSFVGNQLAIRQPNPN-FVVLRRQ 65
           + S+++S I  + S  R F    +  PS+ SR  L SS +G +L   QP+   FV   R 
Sbjct: 1   MASYTVSFIPLTLSNPRIFVSRQNGSPSSSSRIPLTSSLLGKKLLATQPSHRCFVPKLRC 60

Query: 66  STIMTVTFSLPASKPEGVSADKMPKWSARAIKSFAMGELEARKLKYPNTGTEALLMGILV 125
            T  +   ++P ++PE  S+DK+PKWSARAIKS AMGELEARKLKYP+TGTEA+LMGILV
Sbjct: 61  LTSASTVLNVPIAQPENGSSDKIPKWSARAIKSLAMGELEARKLKYPSTGTEAILMGILV 120

Query: 126 EGTSQAAKVLRASGVTLFKVRDETINLLGKSDMYFFSPEHPPLTEPAQKALDWAIDQKLK 185
           EGTS  AK LR +GVTLFKVRDET++LLGKSDMYFFSPEHPPLTEPAQKA+ WAID+K K
Sbjct: 121 EGTSTVAKFLRGNGVTLFKVRDETLSLLGKSDMYFFSPEHPPLTEPAQKAIAWAIDEKNK 180

Query: 186 SGEDGEVTVTYLLLGIWEQKESAAHQIMTALGFSDEKAKELSKFMDKDIVLAHHK 238
           S  DGE+T  YLLLG+W QK+SA  QI+  LGF+++KAKE+ K M++D+ L+  K
Sbjct: 181 SDVDGELTTAYLLLGVWSQKDSAGRQILEKLGFNEDKAKEVEKSMNEDVDLSFKK 235

[Close]

BLAST of Spo12911.1 vs. ExPASy Swiss-Prot
Match: CLPT2_ARATH (ATP-dependent Clp protease ATP-binding subunit CLPT2, chloroplastic OS=Arabidopsis thaliana GN=CLPT2 PE=1 SV=1)

HSP 1 Score: 214.2 bits (544), Expect = 1.600e-54
Identity = 126/235 (53.62%), Postives = 162/235 (68.94%), Query Frame = 1


		  
Query: 1   MAAHS-----LTSHSLSSIASSSELRKFNCSNSFLPSAKSRSLVSSFVG---NQLAIRQP 60
           MAAHS     LT+  +S I S S+ +K +    F  + K+  L + ++G   + L++  P
Sbjct: 1   MAAHSSCNFALTNPIISQIDSFSK-KKLSVPLYFFSTRKA--LTNPWLGVVDSSLSLTSP 60

Query: 61  NPNFVVLRRQSTIMTVTFSLPASKPEGVSAD-KMPKWSARAIKSFAMGELEARKLKYPNT 120
                  R +    +   SLP + P+ V +D K PKWS RAIKSFAMGELEARKLKYPNT
Sbjct: 61  VSALQTNRPRRIHKSAISSLPTANPDLVVSDAKKPKWSWRAIKSFAMGELEARKLKYPNT 120

Query: 121 GTEALLMGILVEGTSQAAKVLRASGVTLFKVRDETINLLGKSDMYFFSPEHPPLTEPAQK 180
           GTEALLMGIL+EGTS  +K LRA+ + L+KVR+ET+ LLGK+DMYFFSPEHPPLTE AQ+
Sbjct: 121 GTEALLMGILIEGTSFTSKFLRANKIMLYKVREETVKLLGKADMYFFSPEHPPLTEDAQR 180

Query: 181 ALDWAIDQKLKSGEDGEVTVTYLLLGIWEQKESAAHQIMTALGFSDEKAKELSKF 227
           ALD A+DQ LK+G  GEV   ++LLGIW + ES  H+I+  LGF+DEK+KEL  F
Sbjct: 181 ALDSALDQNLKAGGIGEVMPAHILLGIWSEVESPGHKILATLGFTDEKSKELESF 232

[Close]

BLAST of Spo12911.1 vs. ExPASy Swiss-Prot
Match: CLPC1_ORYSJ (Chaperone protein ClpC1, chloroplastic OS=Oryza sativa subsp. japonica GN=CLPC1 PE=2 SV=2)

HSP 1 Score: 68.9 bits (167), Expect = 8.300e-11
Identity = 50/176 (28.41%), Postives = 90/176 (51.14%), Query Frame = 1


		  
Query: 43  VGNQLAIRQPN---PNFVVLRRQSTIMTVTFSLPASK-PEGVSADKMPKWSARAIKSFAM 102
           +G    +RQ N      V+ R   +I+    S P      GV      +++ +AIK   +
Sbjct: 42  LGGFQGLRQTNFLDSRSVIKRDFGSIVASQISRPRGLGSRGVVRAMFERFTEKAIKVIML 101

Query: 103 GELEARKLKYPNTGTEALLMGILVEGTSQAAKVLRASGVTLFKVRDETINLLGKSDMYFF 162
            + EAR+L +   GTE +L+G++ EGT  AAKVL++ G+ L   R E   ++G+     F
Sbjct: 102 AQEEARRLGHNFVGTEQILLGLIGEGTGIAAKVLKSMGINLKDARVEVEKIIGRGS--GF 161

Query: 163 SPEHPPLTEPAQKALDWAIDQKLKSGEDGEVTVTYLLLGIWEQKESAAHQIMTALG 215
                P T  A++ L+ ++++  + G +  +   +LLLG+  + E  A +++ +LG
Sbjct: 162 VAVEIPFTPRAKRVLELSLEEARQLGHN-YIGSEHLLLGLLREGEGVAARVLESLG 214

[Close]

BLAST of Spo12911.1 vs. ExPASy Swiss-Prot
Match: CLPC_CYACA (ATP-dependent Clp protease ATP-binding subunit ClpA homolog OS=Cyanidium caldarium GN=clpC PE=3 SV=1)

HSP 1 Score: 67.8 bits (164), Expect = 1.800e-10
Identity = 43/128 (33.59%), Postives = 72/128 (56.25%), Query Frame = 1


		  
Query: 87  KWSARAIKSFAMGELEARKLKYPNTGTEALLMGILVEGTSQAAKVLRASGVTLFKVRDET 146
           +++ +A+K   + + EAR+L +   GTE +L+GIL EGT  AAK L++ G+TL   R E 
Sbjct: 35  RFTEKAVKVIMLAQEEARRLGHNFVGTEQILLGILGEGTGLAAKALKSMGITLKDARIEV 94

Query: 147 INLLGKSDMYFFSPEHPPLTEPAQKALDWAIDQKLKSGEDGEVTVTYLLLGIWEQKESAA 206
             ++G+     F     P T  A+K L+ AI++  +      V   +LLLG+ ++ E  A
Sbjct: 95  EKIIGRGS--GFVAIEIPFTPRAKKILELAIEES-RILTHNYVGTEHLLLGLIKEGEGVA 154

Query: 207 HQIMTALG 215
            +++  LG
Sbjct: 155 ARVLENLG 159

[Close]

BLAST of Spo12911.1 vs. ExPASy Swiss-Prot
Match: CLPC2_ORYSJ (Chaperone protein ClpC2, chloroplastic OS=Oryza sativa subsp. japonica GN=CLPC2 PE=2 SV=2)

HSP 1 Score: 67.8 bits (164), Expect = 1.800e-10
Identity = 40/135 (29.63%), Postives = 77/135 (57.04%), Query Frame = 1


		  
Query: 80  VSADKMPKWSARAIKSFAMGELEARKLKYPNTGTEALLMGILVEGTSQAAKVLRASGVTL 139
           V+     +++ +AIK   + + EAR+L +   GTE +L+G++ EGT  AAKVL++ G+ L
Sbjct: 84  VTRSMFERFTEKAIKVIMLAQEEARRLGHNFVGTEQILLGLIGEGTGIAAKVLKSMGINL 143

Query: 140 FKVRDETINLLGKSDMYFFSPEHPPLTEPAQKALDWAIDQKLKSGEDGEVTVTYLLLGIW 199
              R E   ++G+ +   F     P T  A++ L+ ++++  + G +  +   +LLLG+ 
Sbjct: 144 KDARVEVEKIIGRGN--GFVAVEIPFTPRAKRVLELSLEEARQLGHN-YIGSEHLLLGLL 203

Query: 200 EQKESAAHQIMTALG 215
            + E  A +++ +LG
Sbjct: 204 REGEGVAARVLESLG 215

[Close]

BLAST of Spo12911.1 vs. TAIR (Arabidopsis)
Match: AT4G25370.1 (Double Clp-N motif protein)

HSP 1 Score: 254.2 bits (648), Expect = 7.800e-68
Identity = 139/235 (59.15%), Postives = 175/235 (74.47%), Query Frame = 1


		  
Query: 6   LTSHSLSSIASS-SELRKFNCSNSFLPSAKSR-SLVSSFVGNQLAIRQPNPN-FVVLRRQ 65
           + S+++S I  + S  R F    +  PS+ SR  L SS +G +L   QP+   FV   R 
Sbjct: 1   MASYTVSFIPLTLSNPRIFVSRQNGSPSSSSRIPLTSSLLGKKLLATQPSHRCFVPKLRC 60

Query: 66  STIMTVTFSLPASKPEGVSADKMPKWSARAIKSFAMGELEARKLKYPNTGTEALLMGILV 125
            T  +   ++P ++PE  S+DK+PKWSARAIKS AMGELEARKLKYP+TGTEA+LMGILV
Sbjct: 61  LTSASTVLNVPIAQPENGSSDKIPKWSARAIKSLAMGELEARKLKYPSTGTEAILMGILV 120

Query: 126 EGTSQAAKVLRASGVTLFKVRDETINLLGKSDMYFFSPEHPPLTEPAQKALDWAIDQKLK 185
           EGTS  AK LR +GVTLFKVRDET++LLGKSDMYFFSPEHPPLTEPAQKA+ WAID+K K
Sbjct: 121 EGTSTVAKFLRGNGVTLFKVRDETLSLLGKSDMYFFSPEHPPLTEPAQKAIAWAIDEKNK 180

Query: 186 SGEDGEVTVTYLLLGIWEQKESAAHQIMTALGFSDEKAKELSKFMDKDIVLAHHK 238
           S  DGE+T  YLLLG+W QK+SA  QI+  LGF+++KAKE+ K M++D+ L+  K
Sbjct: 181 SDVDGELTTAYLLLGVWSQKDSAGRQILEKLGFNEDKAKEVEKSMNEDVDLSFKK 235

[Close]

BLAST of Spo12911.1 vs. TAIR (Arabidopsis)
Match: AT4G12060.1 (Double Clp-N motif protein)

HSP 1 Score: 214.2 bits (544), Expect = 9.000e-56
Identity = 126/235 (53.62%), Postives = 162/235 (68.94%), Query Frame = 1


		  
Query: 1   MAAHS-----LTSHSLSSIASSSELRKFNCSNSFLPSAKSRSLVSSFVG---NQLAIRQP 60
           MAAHS     LT+  +S I S S+ +K +    F  + K+  L + ++G   + L++  P
Sbjct: 1   MAAHSSCNFALTNPIISQIDSFSK-KKLSVPLYFFSTRKA--LTNPWLGVVDSSLSLTSP 60

Query: 61  NPNFVVLRRQSTIMTVTFSLPASKPEGVSAD-KMPKWSARAIKSFAMGELEARKLKYPNT 120
                  R +    +   SLP + P+ V +D K PKWS RAIKSFAMGELEARKLKYPNT
Sbjct: 61  VSALQTNRPRRIHKSAISSLPTANPDLVVSDAKKPKWSWRAIKSFAMGELEARKLKYPNT 120

Query: 121 GTEALLMGILVEGTSQAAKVLRASGVTLFKVRDETINLLGKSDMYFFSPEHPPLTEPAQK 180
           GTEALLMGIL+EGTS  +K LRA+ + L+KVR+ET+ LLGK+DMYFFSPEHPPLTE AQ+
Sbjct: 121 GTEALLMGILIEGTSFTSKFLRANKIMLYKVREETVKLLGKADMYFFSPEHPPLTEDAQR 180

Query: 181 ALDWAIDQKLKSGEDGEVTVTYLLLGIWEQKESAAHQIMTALGFSDEKAKELSKF 227
           ALD A+DQ LK+G  GEV   ++LLGIW + ES  H+I+  LGF+DEK+KEL  F
Sbjct: 181 ALDSALDQNLKAGGIGEVMPAHILLGIWSEVESPGHKILATLGFTDEKSKELESF 232

[Close]

BLAST of Spo12911.1 vs. TAIR (Arabidopsis)
Match: AT5G50920.1 (CLPC homologue 1)

HSP 1 Score: 65.9 bits (159), Expect = 3.900e-11
Identity = 39/128 (30.47%), Postives = 73/128 (57.03%), Query Frame = 1


		  
Query: 87  KWSARAIKSFAMGELEARKLKYPNTGTEALLMGILVEGTSQAAKVLRASGVTLFKVRDET 146
           +++ +AIK   + + EAR+L +   GTE +L+G++ EGT  AAKVL++ G+ L   R E 
Sbjct: 97  RFTEKAIKVIMLAQEEARRLGHNFVGTEQILLGLIGEGTGIAAKVLKSMGINLKDARVEV 156

Query: 147 INLLGKSDMYFFSPEHPPLTEPAQKALDWAIDQKLKSGEDGEVTVTYLLLGIWEQKESAA 206
             ++G+     F     P T  A++ L+ ++++  + G +  +   +LLLG+  + E  A
Sbjct: 157 EKIIGRGS--GFVAVEIPFTPRAKRVLELSLEEARQLGHN-YIGSEHLLLGLLREGEGVA 216

Query: 207 HQIMTALG 215
            +++  LG
Sbjct: 217 ARVLENLG 221

[Close]

BLAST of Spo12911.1 vs. TAIR (Arabidopsis)
Match: AT3G48870.1 (Clp ATPase)

HSP 1 Score: 65.5 bits (158), Expect = 5.200e-11
Identity = 47/161 (29.19%), Postives = 84/161 (52.17%), Query Frame = 1


		  
Query: 59  LRRQSTIMTVTFSLPASKPEGVSADKMPK-----WSARAIKSFAMGELEARKLKYPNTGT 118
           L R S    V + L  S     ++  +PK     ++ +AIK   + + EAR+L +   GT
Sbjct: 84  LGRPSPGFLVKYKLAKSSGREKASRCVPKAMFERFTEKAIKVIMLSQEEARRLGHNFVGT 143

Query: 119 EALLMGILVEGTSQAAKVLRASGVTLFKVRDETINLLGKSDMYFFSPEHPPLTEPAQKAL 178
           E +L+G++ EGT  AAKVL++ G+ L   R E   ++G+     F     P T  A++ L
Sbjct: 144 EQILLGLIGEGTGIAAKVLKSMGINLKDSRVEVEKIIGRGS--GFVAVEIPFTPRAKRVL 203

Query: 179 DWAIDQKLKSGEDGEVTVTYLLLGIWEQKESAAHQIMTALG 215
           + ++++  + G +  +   +LLLG+  + E  A +++  LG
Sbjct: 204 ELSLEEARQLGHN-YIGSEHLLLGLLREGEGVAARVLENLG 241

[Close]

BLAST of Spo12911.1 vs. TAIR (Arabidopsis)
Match: AT3G45450.1 (Double Clp-N motif-containing P-loop nucleoside triphosphate hydrolases superfamily protein)

HSP 1 Score: 50.4 bits (119), Expect = 1.700e-6
Identity = 25/66 (37.88%), Postives = 42/66 (63.64%), Query Frame = 1


		  
Query: 87  KWSARAIKSFAMGELEARKLKYPNTGTEALLMGILVEGTSQAAKVLRASGVTLFKVRDET 146
           +++ +AIK   + + EAR+L Y   GTE +L+ ++ EGT  AAKVL++ G+ L   R E 
Sbjct: 4   RFTEKAIKVITLAQEEARRLGYNFFGTEHILLSLIGEGTGIAAKVLKSMGINLKDARVEV 63

Query: 147 INLLGK 153
             ++G+
Sbjct: 64  EKIIGR 69

The following BLAST results are available for this feature:

BLAST of Spo12911.1 vs. NCBI nr
BLAST of Spo12911.1 vs. UniProtKB/TrEMBL
BLAST of Spo12911.1 vs. ExPASy Swiss-Prot
BLAST of Spo12911.1 vs. TAIR (Arabidopsis)

BLAST of Spo12911.1 vs. NCBI nr
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. NCBI nr)
Total hits: 5


Match Name	E-value	Identity	Description
gi\|902217451\|gb\|KNA17713.1\|	4.7e-123	98.7	hypothetical protein SOVF_0773...	[more]
gi\|731322571\|ref\|XP_010671969.1\|	8.3e-104	84.2	PREDICTED: clp protease-relate...	[more]
gi\|596004279\|ref\|XP_007218298.1\|	3.0e-77	66.6	hypothetical protein PRUPE_ppa...	[more]
gi\|565362648\|ref\|XP_006348058.1\|	7.3e-76	63.1	PREDICTED: ATP-dependent Clp p...	[more]
gi\|698524270\|ref\|XP_009758941.1\|	1.3e-75	64.4	PREDICTED: clp protease-relate...	[more]

BLAST of Spo12911.1 vs. UniProtKB/TrEMBL
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. UniprotKB/TrEMBL)
Total hits: 5


Match Name	E-value	Identity	Description
A0A0K9RE38_SPIOL	3.3e-123	98.7	Uncharacterized protein OS=Spi...	[more]
A0A0J8CQK4_BETVU	5.8e-104	84.2	Uncharacterized protein OS=Bet...	[more]
M5X0A6_PRUPE	2.1e-77	66.6	Uncharacterized protein OS=Pru...	[more]
A0A0V0HL17_SOLCH	2.5e-75	63.1	Putative clp protease-related ...	[more]
A0A059DK71_EUCGR	7.7e-72	62.2	Uncharacterized protein OS=Euc...	[more]

BLAST of Spo12911.1 vs. ExPASy Swiss-Prot
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. ExPASy SwissProt)
Total hits: 5


Match Name	E-value	Identity	Description
CLPT1_ARATH	1.4e-66	59.1	ATP-dependent Clp protease ATP...	[more]
CLPT2_ARATH	1.6e-54	53.6	ATP-dependent Clp protease ATP...	[more]
CLPC1_ORYSJ	8.3e-11	28.4	Chaperone protein ClpC1, chlor...	[more]
CLPC_CYACA	1.8e-10	33.5	ATP-dependent Clp protease ATP...	[more]
CLPC2_ORYSJ	1.8e-10	29.6	Chaperone protein ClpC2, chlor...	[more]

BLAST of Spo12911.1 vs. TAIR (Arabidopsis)
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. TAIR)
Total hits: 5


Match Name	E-value	Identity	Description
AT4G25370.1	7.8e-68	59.1	Double Clp-N motif protein	[more]
AT4G12060.1	9.0e-56	53.6	Double Clp-N motif protein	[more]
AT5G50920.1	3.9e-11	30.4	CLPC homologue 1	[more]
AT3G48870.1	5.2e-11	29.1	Clp ATPase	[more]
AT3G45450.1	1.7e-6	37.8	Double Clp-N motif-containing ...	[more]

InterPro

Analysis Name: InterPro Annotations of S. oleracea
Date Performed: 2018-06-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR004176	Clp, N-terminal	GENE3D	1.10.1780.10		coord: 86..222 score: 1.9
IPR004176	Clp, N-terminal	PFAM	PF02861	Clp_N	coord: 102..151 score: 1.9E-9coord: 186..226 score: 9.
IPR004176	Clp, N-terminal	unknown	SSF81923	Double Clp-N motif	coord: 87..219 score: 8.37
None	No IPR available	PANTHER	PTHR11638	ATP-DEPENDENT CLP PROTEASE	coord: 55..210 score: 4.2
None	No IPR available	PANTHER	PTHR11638:SF105	SUBFAMILY NOT NAMED	coord: 55..210 score: 4.2

GO Annotation

GO Assignments

This mRNA is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0019538	protein metabolic process
cellular_component	GO:0009941	chloroplast envelope
cellular_component	GO:0009570	chloroplast stroma
cellular_component	GO:0009579	thylakoid